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PI0009046 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTACGATGTACCTATTGTACCTGCGCCAGTTCAAAGGAGACGTGCTCAAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACATGTGCAAAAAGTGCCTCATGTGAGACAAACACAAAGCGGGACTGGTGACGTTAGTCCAATGATGAGGATGCCGGCATTTGGAACGGGATATTATGATTCAGGAGTCGGTCAATCGTCAAACTTCGGGACAGGATATTATAATTCAGAGGCAGGTCCATCATCGTCAAACTTTGGACAAGGATACTACGATTTAGGGACCGATCCATCGTCTTCATACATGCATGGACACGGGCGTGGTCGTGGAGAACATAACGAATATTTGTACTACGAACCGCCTGCAGCGGTACCCGAGCAGCCATATGAGCAACAACAAGAGAATCAGGAGGGACTAGAGCAACAAAAAGTGCAGGGTCGACGATGGCAACCAGCAAGAAATCGGCGACGTCCAGGTTGTGGAACACATTGATTTTTTTAAAAAAATTTGTAATTGA ATGTACGATGTACCTATTGTACCTGCGCCAGTTCAAAGGAGACGTGCTCAAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACATGTGCAAAAAGTGCCTCATGTGAGACAAACACAAAGCGGGACTGGTGACGTTAGTCCAATGATGAGGATGCCGGCATTTGGAACGGGATATTATGATTCAGGAGTCGGTCAATCGTCAAACTTCGGGACAGGATATTATAATTCAGAGGCAGGTCCATCATCGTCAAACTTTGGACAAGGATACTACGATTTAGGGACCGATCCATCGTCTTCATACATGCATGGACACGGGCGTGGTCGTGGAGAACATAACGAATATTTGTACTACGAACCGCCTGCAGCGGTACCCGAGCAGCCATATGACAACAAAAAGTGCAGGGTCGACGATGGCAACCAGCAAGAAATCGGCGACGTCCAGGTTGTGGAACACATTGATTTTTTTAAAAAAATTTGTAATTGA ATGTACGATGTACCTATTGTACCTGCGCCAGTTCAAAGGAGACGTGCTCAAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACATGTGCAAAAAGTGCCTCATGTGAGACAAACACAAAGCGGGACTGGTGACGTTAGTCCAATGATGAGGATGCCGGCATTTGGAACGGGATATTATGATTCAGGAGTCGGTCAATCGTCAAACTTCGGGACAGGATATTATAATTCAGAGGCAGGTCCATCATCGTCAAACTTTGGACAAGGATACTACGATTTAGGGACCGATCCATCGTCTTCATACATGCATGGACACGGGCGTGGTCGTGGAGAACATAACGAATATTTGTACTACGAACCGCCTGCAGCGGTACCCGAGCAGCCATATGACAACAAAAAGTGCAGGGTCGACGATGGCAACCAGCAAGAAATCGGCGACGTCCAGGTTGTGGAACACATTGATTTTTTTAAAAAAATTTGTAATTGA MYDVPIVPAPVQRRRAQVQEPDELEEVEQHVQKVPHVRQTQSGTGDVSPMMRMPAFGTGYYDSGVGQSSNFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLYYEPPAAVPEQPYDNKKCRVDDGNQQEIGDVQVVEHIDFFKKICN Homology
BLAST of PI0009046 vs. ExPASy TrEMBL
Match: A0A5A7T6Q6 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G00300 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 4.9e-53 Identity = 118/170 (69.41%), Postives = 132/170 (77.65%), Query Frame = 0
BLAST of PI0009046 vs. ExPASy TrEMBL
Match: A0A5D3CHF6 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G001150 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 4.9e-53 Identity = 118/170 (69.41%), Postives = 132/170 (77.65%), Query Frame = 0
BLAST of PI0009046 vs. ExPASy TrEMBL
Match: A0A5A7SU33 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold400G00810 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 2.1e-48 Identity = 102/128 (79.69%), Postives = 112/128 (87.50%), Query Frame = 0
BLAST of PI0009046 vs. ExPASy TrEMBL
Match: A0A5A7UKC7 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G001140 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 6.2e-48 Identity = 101/128 (78.91%), Postives = 112/128 (87.50%), Query Frame = 0
BLAST of PI0009046 vs. ExPASy TrEMBL
Match: A0A5A7VIP6 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G001330 PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 1.8e-47 Identity = 101/128 (78.91%), Postives = 111/128 (86.72%), Query Frame = 0
BLAST of PI0009046 vs. NCBI nr
Match: KAA0037866.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 217.2 bits (552), Expect = 1.0e-52 Identity = 118/170 (69.41%), Postives = 132/170 (77.65%), Query Frame = 0
BLAST of PI0009046 vs. NCBI nr
Match: TYK09816.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 217.2 bits (552), Expect = 1.0e-52 Identity = 118/170 (69.41%), Postives = 132/170 (77.65%), Query Frame = 0
BLAST of PI0009046 vs. NCBI nr
Match: KAA0034013.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 201.8 bits (512), Expect = 4.4e-48 Identity = 102/128 (79.69%), Postives = 112/128 (87.50%), Query Frame = 0
BLAST of PI0009046 vs. NCBI nr
Match: KAA0055624.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 200.3 bits (508), Expect = 1.3e-47 Identity = 101/128 (78.91%), Postives = 112/128 (87.50%), Query Frame = 0
BLAST of PI0009046 vs. NCBI nr
Match: KAA0067080.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 198.7 bits (504), Expect = 3.7e-47 Identity = 101/128 (78.91%), Postives = 111/128 (86.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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