Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAAACACTAGACGAGGAACCTATACTCCTAAAGCTCCTGTCAAAAAGATTTCAACACCTAAAGATGTTGGTCCCTCTGTCAAGCGCTTGCGAACTAACAAGCATGGCGTTTGTATGCGAGGCACTACCAAGAAAGCTTCCACTTCTGTGCATCCTTCTACACCCATTTCTTCTAATATCGTGGTTCCTTCTCCTCCTCCCTCTCTTCCTGTTTCTCCTATTTATCCTGTAGTTCATGAATCATCTTTGTCTTCCTCTGCCTCTAATACGCAACCTCGAAGTCATCCTTCTCAATCACTGCATTCTAATCACTTAAATACGCTTCTTAGCCATGATTCTGTTAATCAGTCTTTCGTGTCTTCTGCTCCTGCCCCTCATGCATCCACTGCTTCATCTTCATCTTCTTCTCAGGATCACATTCCTTTGGCCCGTTTACTTCGAAAAAATCCCAGTACTATTGTCCTTGAGTCAACACCACCTAACCCTAGTACTCTTCCTGTCACTCAACCTACCTCTGAATCAACTCCTACTATTAATGGTTCTCCTCCTGTGCCTCAGTTCAACCCTGATTCCGTTCCATCTTCCAATTCTCCTCCTCCTCCTCCTACTCAACCTAAAACTAAGGCAAAAAACAAACGTATCTCTACAAAGTCTGGTAGGAGAAAAGTGCCTCTTCATGTTAATCTTGTTCCTATTGATGCTCTTTCTTTCTATCATGAAGCTCATGTCCACAAATGGAAATATATGGTTCAAAGACGGATTGCAAATGAGTCTGAAGTATCTGATGATCATCATTCTTGTCTTGCAATTATGACCCTTATATCTCAAGCAAAACTTTTGTCCATTGTGTCTAACCTTGGTCCTTTCTATCCGAAACTAGTTAGGGAAATGTTTGTTAATATCCCTTCCTCCTTTGAAGATCCCAGCAGTCCTGATTTTCATAAAATTCATGTGAGAGGTGTGGCCTTCACTATATCCCCTGCTTCTATCAATGCTTCTCTTGATATTCTTCTTCCTACTGATCCTCCAACTTCTCCTACTCCTGACGAGCTTGCAACTGAGTTAACGGGGGGCACTGTCTCTCTTTGGCCAACTACCGGTTACCTTCCAGCAGCCCGACTAAGTGTTAAGTATGCCATCCTTCACAAGATTGGCATCCACAGTTGGCTTCCTTCTCTTCATGCTTCCACTGTGTCTCCTGTTCTGGCTAACTTAATCTTTCTGATAAGAACCGGACAACCTGTTGATTTTGGTTCATTTGTTGTGAATCAACTCAAGCGTCACATTGATTCTTATGCCATCAAGCTCCCTATCTGCTTGCCTCATTTTTTTTGTAATCTCCTTCTGACCCAGAACCGTACAATTTTTCTGTAA
mRNA sequence
ATGGTAAACACTAGACGAGGAACCTATACTCCTAAAGCTCCTGTCAAAAAGATTTCAACACCTAAAGATGTTGGTCCCTCTGTCAAGCGCTTGCGAACTAACAAGCATGGCGTTTGTATGCGAGGCACTACCAAGAAAGCTTCCACTTCTGTGCATCCTTCTACACCCATTTCTTCTAATATCGTGGTTCCTTCTCCTCCTCCCTCTCTTCCTGTTTCTCCTATTTATCCTGTAGTTCATGAATCATCTTTGTCTTCCTCTGCCTCTAATACGCAACCTCGAAGTCATCCTTCTCAATCACTGCATTCTAATCACTTAAATACGCTTCTTAGCCATGATTCTGTTAATCAGTCTTTCGTGTCTTCTGCTCCTGCCCCTCATGCATCCACTGCTTCATCTTCATCTTCTTCTCAGGATCACATTCCTTTGGCCCGTTTACTTCGAAAAAATCCCAGTACTATTGTCCTTGAGTCAACACCACCTAACCCTAGTACTCTTCCTGTCACTCAACCTACCTCTGAATCAACTCCTACTATTAATGGTTCTCCTCCTGTGCCTCAGTTCAACCCTGATTCCGTTCCATCTTCCAATTCTCCTCCTCCTCCTCCTACTCAACCTAAAACTAAGGCAAAAAACAAACGTATCTCTACAAAGTCTGGTAGGAGAAAAGTGCCTCTTCATGTTAATCTTGTTCCTATTGATGCTCTTTCTTTCTATCATGAAGCTCATGTCCACAAATGGAAATATATGGTTCAAAGACGGATTGCAAATGAGTCTGAAGTATCTGATGATCATCATTCTTGTCTTGCAATTATGACCCTTATATCTCAAGCAAAACTTTTGTCCATTGTGTCTAACCTTGGTCCTTTCTATCCGAAACTAGTTAGGGAAATGTTTGTTAATATCCCTTCCTCCTTTGAAGATCCCAGCAGTCCTGATTTTCATAAAATTCATGTGAGAGGTGTGGCCTTCACTATATCCCCTGCTTCTATCAATGCTTCTCTTGATATTCTTCTTCCTACTGATCCTCCAACTTCTCCTACTCCTGACGAGCTTGCAACTGAGTTAACGGGGGGCACTGTCTCTCTTTGGCCAACTACCGGTTACCTTCCAGCAGCCCGACTAAGTGTTAAGTATGCCATCCTTCACAAGATTGGCATCCACAGTTGGCTTCCTTCTCTTCATGCTTCCACTGTGTCTCCTGTTCTGGCTAACTTAATCTTTCTGATAAGAACCGGACAACCTGTTGATTTTGGTTCATTTGTTGTGAATCAACTCAAGCGTCACATTGATTCTTATGCCATCAAGCTCCCTATCTGCTTGCCTCATTTTTTTTGTAATCTCCTTCTGACCCAGAACCGTACAATTTTTCTGTAA
Coding sequence (CDS)
ATGGTAAACACTAGACGAGGAACCTATACTCCTAAAGCTCCTGTCAAAAAGATTTCAACACCTAAAGATGTTGGTCCCTCTGTCAAGCGCTTGCGAACTAACAAGCATGGCGTTTGTATGCGAGGCACTACCAAGAAAGCTTCCACTTCTGTGCATCCTTCTACACCCATTTCTTCTAATATCGTGGTTCCTTCTCCTCCTCCCTCTCTTCCTGTTTCTCCTATTTATCCTGTAGTTCATGAATCATCTTTGTCTTCCTCTGCCTCTAATACGCAACCTCGAAGTCATCCTTCTCAATCACTGCATTCTAATCACTTAAATACGCTTCTTAGCCATGATTCTGTTAATCAGTCTTTCGTGTCTTCTGCTCCTGCCCCTCATGCATCCACTGCTTCATCTTCATCTTCTTCTCAGGATCACATTCCTTTGGCCCGTTTACTTCGAAAAAATCCCAGTACTATTGTCCTTGAGTCAACACCACCTAACCCTAGTACTCTTCCTGTCACTCAACCTACCTCTGAATCAACTCCTACTATTAATGGTTCTCCTCCTGTGCCTCAGTTCAACCCTGATTCCGTTCCATCTTCCAATTCTCCTCCTCCTCCTCCTACTCAACCTAAAACTAAGGCAAAAAACAAACGTATCTCTACAAAGTCTGGTAGGAGAAAAGTGCCTCTTCATGTTAATCTTGTTCCTATTGATGCTCTTTCTTTCTATCATGAAGCTCATGTCCACAAATGGAAATATATGGTTCAAAGACGGATTGCAAATGAGTCTGAAGTATCTGATGATCATCATTCTTGTCTTGCAATTATGACCCTTATATCTCAAGCAAAACTTTTGTCCATTGTGTCTAACCTTGGTCCTTTCTATCCGAAACTAGTTAGGGAAATGTTTGTTAATATCCCTTCCTCCTTTGAAGATCCCAGCAGTCCTGATTTTCATAAAATTCATGTGAGAGGTGTGGCCTTCACTATATCCCCTGCTTCTATCAATGCTTCTCTTGATATTCTTCTTCCTACTGATCCTCCAACTTCTCCTACTCCTGACGAGCTTGCAACTGAGTTAACGGGGGGCACTGTCTCTCTTTGGCCAACTACCGGTTACCTTCCAGCAGCCCGACTAAGTGTTAAGTATGCCATCCTTCACAAGATTGGCATCCACAGTTGGCTTCCTTCTCTTCATGCTTCCACTGTGTCTCCTGTTCTGGCTAACTTAATCTTTCTGATAAGAACCGGACAACCTGTTGATTTTGGTTCATTTGTTGTGAATCAACTCAAGCGTCACATTGATTCTTATGCCATCAAGCTCCCTATCTGCTTGCCTCATTTTTTTTGTAATCTCCTTCTGACCCAGAACCGTACAATTTTTCTGTAA
Protein sequence
MVNTRRGTYTPKAPVKKISTPKDVGPSVKRLRTNKHGVCMRGTTKKASTSVHPSTPISSNIVVPSPPPSLPVSPIYPVVHESSLSSSASNTQPRSHPSQSLHSNHLNTLLSHDSVNQSFVSSAPAPHASTASSSSSSQDHIPLARLLRKNPSTIVLESTPPNPSTLPVTQPTSESTPTINGSPPVPQFNPDSVPSSNSPPPPPTQPKTKAKNKRISTKSGRRKVPLHVNLVPIDALSFYHEAHVHKWKYMVQRRIANESEVSDDHHSCLAIMTLISQAKLLSIVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASINASLDILLPTDPPTSPTPDELATELTGGTVSLWPTTGYLPAARLSVKYAILHKIGIHSWLPSLHASTVSPVLANLIFLIRTGQPVDFGSFVVNQLKRHIDSYAIKLPICLPHFFCNLLLTQNRTIFL
Homology
BLAST of PI0009035 vs. ExPASy TrEMBL
Match:
A0A5D3CWQ1 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00800 PE=4 SV=1)
HSP 1 Score: 251.9 bits (642), Expect = 5.1e-63
Identity = 117/242 (48.35%), Postives = 166/242 (68.60%), Query Frame = 0
Query: 215 ISTKSGRRKVPLHVNLVPIDALSFYHEAHVHKWKYMVQRRIANESEVSDDHHSCLAIMTL 274
ISTK+GR+K+P +V VPID +SF+ E HKW Y+V+RRIA+E+ + D ++S AI+ L
Sbjct: 573 ISTKAGRQKIPPNVPFVPIDGVSFHSEEDAHKWNYVVKRRIADEANIVDQYNSYPAILDL 632
Query: 275 ISQAKLLSIVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASINAS 334
I +L+ VS +GPFYP+L+RE+ VN+PS F DPS+ ++ K+H+RGV F +SP +N
Sbjct: 633 IRNVRLIRTVSKVGPFYPRLMRELIVNLPSDFNDPSADEYQKVHIRGVYFNMSPELLNTY 692
Query: 335 LDILLPTDPPTS-PTPDELATELTGGTVSLWPTTGYLPAARLSVKYAILHKIGIHSWLPS 394
L + LP D S PTP+ LA ELTGGT+ +WP G L A L++KY+ILH+I I +W+PS
Sbjct: 693 LGLSLPADYAVSYPTPERLAEELTGGTIPVWPVDGQLQVAYLTIKYSILHRIRISNWIPS 752
Query: 395 LHASTVSPVLANLIFLIRTGQPVDFGSFVVNQLKRHIDSYAIKLPICLPHFFCNLLLTQN 454
HA T+S L + ++L+ TG V+ F+ N L RH+D++AI +PIC P LL Q
Sbjct: 753 THAFTISTSLGHFVYLVGTGVKVNASEFIFNHLLRHVDTFAIHIPICFPRILSEFLLAQQ 812
Query: 455 RT 456
T
Sbjct: 813 ST 814
BLAST of PI0009035 vs. ExPASy TrEMBL
Match:
A0A5A7V603 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G001610 PE=4 SV=1)
HSP 1 Score: 249.6 bits (636), Expect = 2.5e-62
Identity = 116/242 (47.93%), Postives = 165/242 (68.18%), Query Frame = 0
Query: 215 ISTKSGRRKVPLHVNLVPIDALSFYHEAHVHKWKYMVQRRIANESEVSDDHHSCLAIMTL 274
ISTK+GR+K+P +V VPID +SF+ E HKW Y+V+RRIA+E+ + D ++S AI+ L
Sbjct: 602 ISTKAGRQKIPPNVPFVPIDGVSFHSEEDAHKWNYVVKRRIADEANIVDQYNSYPAILDL 661
Query: 275 ISQAKLLSIVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASINAS 334
I +L+ VS +GPFYP+L+RE+ VN+PS F DPS+ ++ K+H+RGV F +SP +N
Sbjct: 662 IRNVRLIRTVSKVGPFYPRLMRELIVNLPSDFNDPSADEYQKVHIRGVYFNMSPELLNTY 721
Query: 335 LDILLPTDPPTS-PTPDELATELTGGTVSLWPTTGYLPAARLSVKYAILHKIGIHSWLPS 394
L + LP D S PTP+ LA ELTGGT+ +WP G L A L++KY+ILH+I I +W+PS
Sbjct: 722 LGLSLPADYAVSYPTPERLAEELTGGTIPVWPVDGQLQVAYLTIKYSILHRIRISNWIPS 781
Query: 395 LHASTVSPVLANLIFLIRTGQPVDFGSFVVNQLKRHIDSYAIKLPICLPHFFCNLLLTQN 454
HA T+ L + ++L+ TG V+ F+ N L RH+D++AI +PIC P LL Q
Sbjct: 782 THAFTILTSLGHFVYLVGTGVKVNASEFIFNHLLRHVDTFAIHIPICFPRILSEFLLAQQ 841
Query: 455 RT 456
T
Sbjct: 842 ST 843
BLAST of PI0009035 vs. ExPASy TrEMBL
Match:
A0A5A7TK74 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G001380 PE=4 SV=1)
HSP 1 Score: 239.2 bits (609), Expect = 3.4e-59
Identity = 120/266 (45.11%), Postives = 173/266 (65.04%), Query Frame = 0
Query: 192 SVPSSNSPPPPPTQPKTKAKNKRISTKSGRRKVPLHVNLVPIDALSFYHEAHVHKWKYMV 251
++P + PP + KT+ + ++TK+ R+K+P +V VPID +SF+HE V +WK+++
Sbjct: 13 NLPKGHKPP----KRKTQQARRNVTTKTSRKKIPTNVPSVPIDGISFHHEESVQRWKFVM 72
Query: 252 QRRIANESEVSDDHHSCLAIMTLISQAKLLSIVSNLGPFYPKLVREMFVNIPSSFEDPSS 311
QRRI + +SD + SC++IM LI +A L +SN+GPFYP+L+RE VN+P F DPSS
Sbjct: 73 QRRIVDAVNISDKYQSCMSIMDLIHKAGLEKTISNVGPFYPQLIREFIVNLPDEFNDPSS 132
Query: 312 PDFHKIHVRGVAFTISPASINASLDILLPTD-PPTSPTPDELATELTGGTVSLWPTTGYL 371
D+ +H+RG F ISP IN L+ + D P+ P + LAT L+GGT+S WP G +
Sbjct: 133 ADYQTVHIRGFKFVISPTVINGFLENTVDFDCSPSCPITEVLATVLSGGTLSTWPVNG-I 192
Query: 372 PAARLSVKYAILHKIGIHSWLPSLHASTVSPVLANLIFLIRTGQPVDFGSFVVNQLKRHI 431
PAA LSVKYAILHKI I +W PS HAS++S L ++ I V+ G+F+ NQL RH+
Sbjct: 193 PAAALSVKYAILHKIDIANWFPSSHASSISAALGTFLYQICNDDKVNTGAFIYNQLLRHV 252
Query: 432 DSYAIKLPICLPHFFCNLLLTQNRTI 457
S+ +K+PI F +LLL N +
Sbjct: 253 GSFEVKIPIAFLRLFSSLLLHLNGAV 273
BLAST of PI0009035 vs. ExPASy TrEMBL
Match:
A0A5D3DTI5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold95G00660 PE=4 SV=1)
HSP 1 Score: 239.2 bits (609), Expect = 3.4e-59
Identity = 120/266 (45.11%), Postives = 173/266 (65.04%), Query Frame = 0
Query: 192 SVPSSNSPPPPPTQPKTKAKNKRISTKSGRRKVPLHVNLVPIDALSFYHEAHVHKWKYMV 251
++P + PP + KT+ + ++TK+ R+K+P +V VPID +SF+HE V +WK+++
Sbjct: 13 NLPKGHKPP----KRKTQQARRNVTTKTSRKKIPTNVPSVPIDGISFHHEESVQRWKFVM 72
Query: 252 QRRIANESEVSDDHHSCLAIMTLISQAKLLSIVSNLGPFYPKLVREMFVNIPSSFEDPSS 311
QRRI + +SD + SC++IM LI +A L +SN+GPFYP+L+RE VN+P F DPSS
Sbjct: 73 QRRIVDAVNISDKYQSCMSIMDLIHKAGLEKTISNVGPFYPQLIREFIVNLPDEFNDPSS 132
Query: 312 PDFHKIHVRGVAFTISPASINASLDILLPTD-PPTSPTPDELATELTGGTVSLWPTTGYL 371
D+ +H+RG F ISP IN L+ + D P+ P + LAT L+GGT+S WP G +
Sbjct: 133 ADYQTVHIRGFKFVISPTVINGFLENTVDFDCSPSCPITEVLATVLSGGTLSTWPVNG-I 192
Query: 372 PAARLSVKYAILHKIGIHSWLPSLHASTVSPVLANLIFLIRTGQPVDFGSFVVNQLKRHI 431
PAA LSVKYAILHKI I +W PS HAS++S L ++ I V+ G+F+ NQL RH+
Sbjct: 193 PAAALSVKYAILHKIDIANWFPSSHASSISAALGTFLYQICNDDKVNTGAFIYNQLLRHV 252
Query: 432 DSYAIKLPICLPHFFCNLLLTQNRTI 457
S+ +K+PI F +LLL N +
Sbjct: 253 GSFEVKIPIAFLRLFSSLLLHLNGAV 273
BLAST of PI0009035 vs. ExPASy TrEMBL
Match:
A0A5D3BB19 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold261G00310 PE=4 SV=1)
HSP 1 Score: 238.4 bits (607), Expect = 5.8e-59
Identity = 137/300 (45.67%), Postives = 189/300 (63.00%), Query Frame = 0
Query: 169 TQPTSESTPTINGSP---PVPQFNPDSVP--------SSNSPPPPPTQPKTKAK-----N 228
T+ SE TP N VP + D VP + P PT+ K+ K
Sbjct: 66 TEARSEETPLDNVDGVELVVPSDHNDEVPVADTIDPSAQQQTPSVPTERKSSRKKGQQLR 125
Query: 229 KRISTKSGRRKVPLHVNLVPIDALSFYHEAHVHKWKYMVQRRIANESEVSDDHHSCLAIM 288
+ I+TK+GR+K+PL++ VPI +SF+HE +V +WK++VQRRIA+E +S+ HHSC++I+
Sbjct: 126 RNITTKAGRKKIPLNIPSVPIYGISFHHEENVQRWKFVVQRRIADEVNISNKHHSCVSII 185
Query: 289 TLISQAKLLSIVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASIN 348
LI +A L +SN+G YPKL+R+ VN+ + F DPSSPD+ +H+RG FTISP IN
Sbjct: 186 NLIEKAGLSKTISNVGSIYPKLIRKFIVNLSADFNDPSSPDYQTVHIRGFKFTISPTVIN 245
Query: 349 ASL--DILLPTDPPTSPTPDELATELTGGTVSLWPTTGYLPAARLSVKYAILHKIGIHSW 408
L D+ + P+SP+ D LA+ L+GG +SLW G +PA LSV YAILHKIGI +W
Sbjct: 246 GFLGNDVSI-NFSPSSPSTDVLASVLSGGALSLWLVDG-IPAIALSVNYAILHKIGIANW 305
Query: 409 LPSLHASTVSPVLANLIFLIRTGQPVDFGSFVVNQLKRHIDSYAIKLPICLPHFFCNLLL 451
PS HAS+VS L ++ I VD G+F+ NQL RH+ S+ +KL I LP FF +LLL
Sbjct: 306 FPSSHASSVSTALGTFLYCICNDDRVDAGAFIYNQLLRHVGSFGVKLSIALPRFFSDLLL 363
BLAST of PI0009035 vs. NCBI nr
Match:
TYK16303.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 251.9 bits (642), Expect = 1.0e-62
Identity = 117/242 (48.35%), Postives = 166/242 (68.60%), Query Frame = 0
Query: 215 ISTKSGRRKVPLHVNLVPIDALSFYHEAHVHKWKYMVQRRIANESEVSDDHHSCLAIMTL 274
ISTK+GR+K+P +V VPID +SF+ E HKW Y+V+RRIA+E+ + D ++S AI+ L
Sbjct: 573 ISTKAGRQKIPPNVPFVPIDGVSFHSEEDAHKWNYVVKRRIADEANIVDQYNSYPAILDL 632
Query: 275 ISQAKLLSIVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASINAS 334
I +L+ VS +GPFYP+L+RE+ VN+PS F DPS+ ++ K+H+RGV F +SP +N
Sbjct: 633 IRNVRLIRTVSKVGPFYPRLMRELIVNLPSDFNDPSADEYQKVHIRGVYFNMSPELLNTY 692
Query: 335 LDILLPTDPPTS-PTPDELATELTGGTVSLWPTTGYLPAARLSVKYAILHKIGIHSWLPS 394
L + LP D S PTP+ LA ELTGGT+ +WP G L A L++KY+ILH+I I +W+PS
Sbjct: 693 LGLSLPADYAVSYPTPERLAEELTGGTIPVWPVDGQLQVAYLTIKYSILHRIRISNWIPS 752
Query: 395 LHASTVSPVLANLIFLIRTGQPVDFGSFVVNQLKRHIDSYAIKLPICLPHFFCNLLLTQN 454
HA T+S L + ++L+ TG V+ F+ N L RH+D++AI +PIC P LL Q
Sbjct: 753 THAFTISTSLGHFVYLVGTGVKVNASEFIFNHLLRHVDTFAIHIPICFPRILSEFLLAQQ 812
Query: 455 RT 456
T
Sbjct: 813 ST 814
BLAST of PI0009035 vs. NCBI nr
Match:
KAA0063048.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 249.6 bits (636), Expect = 5.2e-62
Identity = 116/242 (47.93%), Postives = 165/242 (68.18%), Query Frame = 0
Query: 215 ISTKSGRRKVPLHVNLVPIDALSFYHEAHVHKWKYMVQRRIANESEVSDDHHSCLAIMTL 274
ISTK+GR+K+P +V VPID +SF+ E HKW Y+V+RRIA+E+ + D ++S AI+ L
Sbjct: 602 ISTKAGRQKIPPNVPFVPIDGVSFHSEEDAHKWNYVVKRRIADEANIVDQYNSYPAILDL 661
Query: 275 ISQAKLLSIVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASINAS 334
I +L+ VS +GPFYP+L+RE+ VN+PS F DPS+ ++ K+H+RGV F +SP +N
Sbjct: 662 IRNVRLIRTVSKVGPFYPRLMRELIVNLPSDFNDPSADEYQKVHIRGVYFNMSPELLNTY 721
Query: 335 LDILLPTDPPTS-PTPDELATELTGGTVSLWPTTGYLPAARLSVKYAILHKIGIHSWLPS 394
L + LP D S PTP+ LA ELTGGT+ +WP G L A L++KY+ILH+I I +W+PS
Sbjct: 722 LGLSLPADYAVSYPTPERLAEELTGGTIPVWPVDGQLQVAYLTIKYSILHRIRISNWIPS 781
Query: 395 LHASTVSPVLANLIFLIRTGQPVDFGSFVVNQLKRHIDSYAIKLPICLPHFFCNLLLTQN 454
HA T+ L + ++L+ TG V+ F+ N L RH+D++AI +PIC P LL Q
Sbjct: 782 THAFTILTSLGHFVYLVGTGVKVNASEFIFNHLLRHVDTFAIHIPICFPRILSEFLLAQQ 841
Query: 455 RT 456
T
Sbjct: 842 ST 843
BLAST of PI0009035 vs. NCBI nr
Match:
KAA0041779.1 (uncharacterized protein E6C27_scaffold67G001380 [Cucumis melo var. makuwa])
HSP 1 Score: 239.2 bits (609), Expect = 7.0e-59
Identity = 120/266 (45.11%), Postives = 173/266 (65.04%), Query Frame = 0
Query: 192 SVPSSNSPPPPPTQPKTKAKNKRISTKSGRRKVPLHVNLVPIDALSFYHEAHVHKWKYMV 251
++P + PP + KT+ + ++TK+ R+K+P +V VPID +SF+HE V +WK+++
Sbjct: 13 NLPKGHKPP----KRKTQQARRNVTTKTSRKKIPTNVPSVPIDGISFHHEESVQRWKFVM 72
Query: 252 QRRIANESEVSDDHHSCLAIMTLISQAKLLSIVSNLGPFYPKLVREMFVNIPSSFEDPSS 311
QRRI + +SD + SC++IM LI +A L +SN+GPFYP+L+RE VN+P F DPSS
Sbjct: 73 QRRIVDAVNISDKYQSCMSIMDLIHKAGLEKTISNVGPFYPQLIREFIVNLPDEFNDPSS 132
Query: 312 PDFHKIHVRGVAFTISPASINASLDILLPTD-PPTSPTPDELATELTGGTVSLWPTTGYL 371
D+ +H+RG F ISP IN L+ + D P+ P + LAT L+GGT+S WP G +
Sbjct: 133 ADYQTVHIRGFKFVISPTVINGFLENTVDFDCSPSCPITEVLATVLSGGTLSTWPVNG-I 192
Query: 372 PAARLSVKYAILHKIGIHSWLPSLHASTVSPVLANLIFLIRTGQPVDFGSFVVNQLKRHI 431
PAA LSVKYAILHKI I +W PS HAS++S L ++ I V+ G+F+ NQL RH+
Sbjct: 193 PAAALSVKYAILHKIDIANWFPSSHASSISAALGTFLYQICNDDKVNTGAFIYNQLLRHV 252
Query: 432 DSYAIKLPICLPHFFCNLLLTQNRTI 457
S+ +K+PI F +LLL N +
Sbjct: 253 GSFEVKIPIAFLRLFSSLLLHLNGAV 273
BLAST of PI0009035 vs. NCBI nr
Match:
TYK27067.1 (uncharacterized protein E5676_scaffold95G00660 [Cucumis melo var. makuwa])
HSP 1 Score: 239.2 bits (609), Expect = 7.0e-59
Identity = 120/266 (45.11%), Postives = 173/266 (65.04%), Query Frame = 0
Query: 192 SVPSSNSPPPPPTQPKTKAKNKRISTKSGRRKVPLHVNLVPIDALSFYHEAHVHKWKYMV 251
++P + PP + KT+ + ++TK+ R+K+P +V VPID +SF+HE V +WK+++
Sbjct: 13 NLPKGHKPP----KRKTQQARRNVTTKTSRKKIPTNVPSVPIDGISFHHEESVQRWKFVM 72
Query: 252 QRRIANESEVSDDHHSCLAIMTLISQAKLLSIVSNLGPFYPKLVREMFVNIPSSFEDPSS 311
QRRI + +SD + SC++IM LI +A L +SN+GPFYP+L+RE VN+P F DPSS
Sbjct: 73 QRRIVDAVNISDKYQSCMSIMDLIHKAGLEKTISNVGPFYPQLIREFIVNLPDEFNDPSS 132
Query: 312 PDFHKIHVRGVAFTISPASINASLDILLPTD-PPTSPTPDELATELTGGTVSLWPTTGYL 371
D+ +H+RG F ISP IN L+ + D P+ P + LAT L+GGT+S WP G +
Sbjct: 133 ADYQTVHIRGFKFVISPTVINGFLENTVDFDCSPSCPITEVLATVLSGGTLSTWPVNG-I 192
Query: 372 PAARLSVKYAILHKIGIHSWLPSLHASTVSPVLANLIFLIRTGQPVDFGSFVVNQLKRHI 431
PAA LSVKYAILHKI I +W PS HAS++S L ++ I V+ G+F+ NQL RH+
Sbjct: 193 PAAALSVKYAILHKIDIANWFPSSHASSISAALGTFLYQICNDDKVNTGAFIYNQLLRHV 252
Query: 432 DSYAIKLPICLPHFFCNLLLTQNRTI 457
S+ +K+PI F +LLL N +
Sbjct: 253 GSFEVKIPIAFLRLFSSLLLHLNGAV 273
BLAST of PI0009035 vs. NCBI nr
Match:
TYJ96199.1 (uncharacterized protein E5676_scaffold261G00310 [Cucumis melo var. makuwa])
HSP 1 Score: 238.4 bits (607), Expect = 1.2e-58
Identity = 137/300 (45.67%), Postives = 189/300 (63.00%), Query Frame = 0
Query: 169 TQPTSESTPTINGSP---PVPQFNPDSVP--------SSNSPPPPPTQPKTKAK-----N 228
T+ SE TP N VP + D VP + P PT+ K+ K
Sbjct: 66 TEARSEETPLDNVDGVELVVPSDHNDEVPVADTIDPSAQQQTPSVPTERKSSRKKGQQLR 125
Query: 229 KRISTKSGRRKVPLHVNLVPIDALSFYHEAHVHKWKYMVQRRIANESEVSDDHHSCLAIM 288
+ I+TK+GR+K+PL++ VPI +SF+HE +V +WK++VQRRIA+E +S+ HHSC++I+
Sbjct: 126 RNITTKAGRKKIPLNIPSVPIYGISFHHEENVQRWKFVVQRRIADEVNISNKHHSCVSII 185
Query: 289 TLISQAKLLSIVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASIN 348
LI +A L +SN+G YPKL+R+ VN+ + F DPSSPD+ +H+RG FTISP IN
Sbjct: 186 NLIEKAGLSKTISNVGSIYPKLIRKFIVNLSADFNDPSSPDYQTVHIRGFKFTISPTVIN 245
Query: 349 ASL--DILLPTDPPTSPTPDELATELTGGTVSLWPTTGYLPAARLSVKYAILHKIGIHSW 408
L D+ + P+SP+ D LA+ L+GG +SLW G +PA LSV YAILHKIGI +W
Sbjct: 246 GFLGNDVSI-NFSPSSPSTDVLASVLSGGALSLWLVDG-IPAIALSVNYAILHKIGIANW 305
Query: 409 LPSLHASTVSPVLANLIFLIRTGQPVDFGSFVVNQLKRHIDSYAIKLPICLPHFFCNLLL 451
PS HAS+VS L ++ I VD G+F+ NQL RH+ S+ +KL I LP FF +LLL
Sbjct: 306 FPSSHASSVSTALGTFLYCICNDDRVDAGAFIYNQLLRHVGSFGVKLSIALPRFFSDLLL 363
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3CWQ1 | 5.1e-63 | 48.35 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G0... | [more] |
| A0A5A7V603 | 2.5e-62 | 47.93 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G... | [more] |
| A0A5A7TK74 | 3.4e-59 | 45.11 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3DTI5 | 3.4e-59 | 45.11 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3BB19 | 5.8e-59 | 45.67 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| TYK16303.1 | 1.0e-62 | 48.35 | gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
| KAA0063048.1 | 5.2e-62 | 47.93 | gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
| KAA0041779.1 | 7.0e-59 | 45.11 | uncharacterized protein E6C27_scaffold67G001380 [Cucumis melo var. makuwa] | [more] |
| TYK27067.1 | 7.0e-59 | 45.11 | uncharacterized protein E5676_scaffold95G00660 [Cucumis melo var. makuwa] | [more] |
| TYJ96199.1 | 1.2e-58 | 45.67 | uncharacterized protein E5676_scaffold261G00310 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
