PI0008878 (gene) Melon (PI 482460) v1

Overview


Name	PI0008878
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Reverse transcriptase domain-containing protein
Location	chr06: 12428059 .. 12429787 (-)
RNA-Seq Expression	PI0008878
Synteny	PI0008878

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTGGCCTAGTCTGCGTGTTACTGTTTTGCCTTGGGGAATTTCTGACCATTCCCCTATATTATTCTATCCTGCTGTTGAGCAGCAGAGGCGTATTATTTCGTTTCGTTTCTTTAATCATTGGGTGGAGGATACGTCTTTCAGTGATGTGGTGTCTTCGGTTTGGGTGAGAAGGTTGGGTGTGTCTCCGTTAGTGAGTCCTATGCAAAATTTGCATGATCTGAAACCTGTGCTTCGTATACATTTTGGTAGACATATCAGGGGCCTTAGTGAGGAGGTGCGCTCGGCAAAAGAGGCTATGGATAGGGCCCAGAGAGAGGTTGAGCAGGATCCTGGGTCTGTGGAGAGGAGTCGTGATGCGGGTGTTGCGACTGATGCCTTTTGGTCAGCTATCCGTCAGGAAGAAGCCTCTCTCCGTCAGAAATCACCGGTTAGGTGGTTGGAGCTAGGGGATCAGAATTCTGCCTTTTTTCATCGCTCGATTCGTTCTCGTATTGGTCGTAATAATTTGCTTTCTATTGTGGATTCTGAGGGTATTCGGGTGACGTCCCATGAGAGGTTGGTGTAGGTGGCTGTTAATTTTTTTCGTAATAGTCTTGGGTCCCAGGTGGTTGGTTTTTGGGAGCTCTATCCTGTGTTGGAGGAGGTGGTTCAGTTTAGGTGGACGGAGGAGTGTTGTCTTGCGTTACAGGCTCCAATTAGGCGTGAGGAGATCAGGAGGGTGGTTTTTGCTATGGATAGTAGTAAGGCTCCTGGTCCTGATGGTTTTTCGGCAGACTTCTTCAAGGGTGCTTGGAACACGGTTGGTGAGGATTTTTGTGTGCTGTGATGCATTTCTTTGAGACGTGTTATCTGCCTCCTGGGATTAATGCTACAACGATCACCCTCATTCCCAAACGTAGCGGGGCTGATCGTATGGAGGATTATAGGCCTATTTCGTGTTGTAATGTGATTTACAAGTGCATTTCTAAAATTTTGGCGGATAGGCTTCGTGTGTGGCTTCCTTCTTTTATTAGTGGTAATCAATCAGCCTTTTTTGTTGGGAGGAGTATTGTTGATAACATTTTGCTTTGTAAGGGATGGTGGGGGATTATCATGGTTCTTCGGGTCCGCCTAGGTGTGCGATGAAGGTGGATCTTCAGAAGAATTATGATTCAGTGAATTGGGATTTTCTATTCAGCTTGTTGCTTGCTATTGGCACTCCCTTGTGTTTTGTCAGTTGGATTAGGGCGTGTGTTACTTCTCCTATGTTCTCTATCATGGTTAATGGTTCTGTCGAGGGATTTTTTCCTGGAAGAAAAGGGTTACGGCAGGGTGACCCTTTATCCCCCTTTTTGTTTGTGATGGTGATGGAGGTGCTAACTCGTCTTTTGAATAGACCCTCTTTGGATTTCAAGTATCATCATCGTTGTAAGAAGGTTTGTTTGACGCATCTGACCTTCGCTGATGATCTTATGATTTTTTGTTATGCTGACACCGCTTCCATTGGCTTTGTGCGTGAGACTCTTCGTCAGTTTGGGGAGTTATCGGGGTTAATTGCAAATCTGGATAAGAGCTCTATGTTTGTGGCGGGGGTTGACATTGAGGCTGCTACTGTGTTGGCTGGTAGTATGGGGTTTGCGCTGGGTACTTTGCCTGTTCGTTACTTGGGTGTTCCTTTACTCTCTGGTCGTCTACGTGCTTCAGATTGTGCCTCGCTCATCCAGCGTATTACTAGTCGGATTTAG

mRNA sequence

ATGGCTTGGCCTAGTCTGCGTGTTACTGTTTTGCCTTGGGGAATTTCTGACCATTCCCCTATATTATTCTATCCTGCTGTTGAGCAGCAGAGGCGTATTATTTCGTTTCGTTTCTTTAATCATTGGGTGGAGGATACGTCTTTCAGTGATGTGGTGTCTTCGGTTTGGGTGAGAAGGTTGGGTGTGTCTCCGTTAGTGAGTCCTATGCAAAATTTGCATGATCTGAAACCTGTGCTTCGTATACATTTTGGTAGACATATCAGGGGCCTTAGTGAGGAGGTGCGCTCGGCAAAAGAGGCTATGGATAGGGCCCAGAGAGAGGTTGAGCAGGATCCTGGGTCTGTGGAGAGGAGTCGTGATGCGGGTGTTGCGACTGATGCCTTTTGGTCAGCTATCCGTCAGGAAGAAGCCTCTCTCCGTCAGAAATCACCGGTTAGGTGGTTGGAGCTAGGGGATCAGAATTCTGCCTTTTTTCATCGCTCGATTCGTTCTCGTATTGGTCGTAATAATTTGCTTTCTATTGTGGATTCTGAGGGTATTCGGGTGACGTCCCATGAGAGACCCTCTTTGGATTTCAAGTATCATCATCGTTGTAAGAAGGTTTGTTTGACGCATCTGACCTTCGCTGATGATCTTATGATTTTTTGTTATGCTGACACCGCTTCCATTGGCTTTGTGCGTGAGACTCTTCGTCAGTTTGGGGAGTTATCGGGGTTAATTGCAAATCTGGATAAGAGCTCTATGTTTGTGGCGGGGGTTGACATTGAGGCTGCTACTGTGTTGGCTGGTAGTATGGGGTTTGCGCTGGGTACTTTGCCTGTTCGTTACTTGGGTGTTCCTTTACTCTCTGGTCGTCTACGTGCTTCAGATTGTGCCTCGCTCATCCAGCGTATTACTAGTCGGATTTAG

Coding sequence (CDS)

ATGGCTTGGCCTAGTCTGCGTGTTACTGTTTTGCCTTGGGGAATTTCTGACCATTCCCCTATATTATTCTATCCTGCTGTTGAGCAGCAGAGGCGTATTATTTCGTTTCGTTTCTTTAATCATTGGGTGGAGGATACGTCTTTCAGTGATGTGGTGTCTTCGGTTTGGGTGAGAAGGTTGGGTGTGTCTCCGTTAGTGAGTCCTATGCAAAATTTGCATGATCTGAAACCTGTGCTTCGTATACATTTTGGTAGACATATCAGGGGCCTTAGTGAGGAGGTGCGCTCGGCAAAAGAGGCTATGGATAGGGCCCAGAGAGAGGTTGAGCAGGATCCTGGGTCTGTGGAGAGGAGTCGTGATGCGGGTGTTGCGACTGATGCCTTTTGGTCAGCTATCCGTCAGGAAGAAGCCTCTCTCCGTCAGAAATCACCGGTTAGGTGGTTGGAGCTAGGGGATCAGAATTCTGCCTTTTTTCATCGCTCGATTCGTTCTCGTATTGGTCGTAATAATTTGCTTTCTATTGTGGATTCTGAGGGTATTCGGGTGACGTCCCATGAGAGACCCTCTTTGGATTTCAAGTATCATCATCGTTGTAAGAAGGTTTGTTTGACGCATCTGACCTTCGCTGATGATCTTATGATTTTTTGTTATGCTGACACCGCTTCCATTGGCTTTGTGCGTGAGACTCTTCGTCAGTTTGGGGAGTTATCGGGGTTAATTGCAAATCTGGATAAGAGCTCTATGTTTGTGGCGGGGGTTGACATTGAGGCTGCTACTGTGTTGGCTGGTAGTATGGGGTTTGCGCTGGGTACTTTGCCTGTTCGTTACTTGGGTGTTCCTTTACTCTCTGGTCGTCTACGTGCTTCAGATTGTGCCTCGCTCATCCAGCGTATTACTAGTCGGATTTAG

Protein sequence

MAWPSLRVTVLPWGISDHSPILFYPAVEQQRRIISFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAMDRAQREVEQDPGSVERSRDAGVATDAFWSAIRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDSEGIRVTSHERPSLDFKYHHRCKKVCLTHLTFADDLMIFCYADTASIGFVRETLRQFGELSGLIANLDKSSMFVAGVDIEAATVLAGSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRI

Homology

[Close]

BLAST of PI0008878 vs. ExPASy TrEMBL
Match: A0A5D3DT20 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G003080 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 7.2e-82
Identity = 197/494 (39.88%), Postives = 241/494 (48.79%), Query Frame = 0


Query: 2   AWPSLRVTVLPWGISDHSPILFYPAVEQQRRIISFRFFNHWVEDTSFSDVVSSVWVRRLG 61
           AWP++ V VLPWGISDHSPILFYP+ +   +++SF FFNHWVED SF +VV+ +W R  G
Sbjct: 17  AWPTMLVNVLPWGISDHSPILFYPSFQINSKVVSFWFFNHWVEDPSFIEVVARMWNRHEG 76

Query: 62  VSPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAMDRAQREVEQDPGSVERSRDA 121
           VSP+VS M+NLH LKP++R  FGRHI+ LSEEVR+AK AMD AQREVE++P S   S  A
Sbjct: 77  VSPIVSLMRNLHHLKPIMRRRFGRHIKSLSEEVRNAKAAMDLAQREVERNPMSDVLSHQA 136

Query: 122 GVATDAFWSAIRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDSEGIR 181
           G++T+ FW+A+R EEASLRQKS +RWL+LGDQN+AFFHRS+RSR+ RN L S+VDS+G R
Sbjct: 137 GLSTETFWTAVRLEEASLRQKSRIRWLKLGDQNTAFFHRSVRSRMSRNTLRSLVDSDGTR 196

Query: 182 ------------------------------------------VTSHERPSLD-------- 241
                                                     + S + P  D        
Sbjct: 197 EIGYRELSPVIDDIVQFQWSEKCCQALQLPISREEVRRVLFSMDSGKAPGPDGFSAVGVN 256

Query: 242 ------------------------------------------------------------ 301
                                                                       
Sbjct: 257 ATAITLIPNGAERLEDFRPISCCNALYKCISKILADRLRAWLPSFISSNQSAFIPGRSII 316

Query: 302 ------------------------------------------------------------ 303
                                                                       
Sbjct: 317 ENILLCQELVGGYHLNSGKPRCTLKVDLQKAYDSVNWDFLFGLLIAIGTPLKKGVRQGDP 376

[Close]

BLAST of PI0008878 vs. ExPASy TrEMBL
Match: A0A5A7V3Z0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00690 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 2.2e-78
Identity = 198/525 (37.71%), Postives = 243/525 (46.29%), Query Frame = 0


Query: 2   AWPSLRVTVLPWGISDHSPILFYPAVEQQRRIISFRFFNHWVEDTSFSDVVSSVWVRRLG 61
           AWP++ V VLPWGISDHSPILFYP+ +   +++SF FFNHWVED SF +VV+ +W R  G
Sbjct: 17  AWPTMLVNVLPWGISDHSPILFYPSFQINSKVVSFWFFNHWVEDPSFIEVVARMWNRHEG 76

Query: 62  VSPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAMDRAQREVEQDPGSVERSRDA 121
           VSP+VS M+NLH LKP++R  FGRHI+ LSEEVR+AK A+D AQREVE++P S   S  A
Sbjct: 77  VSPIVSLMRNLHHLKPIMRRRFGRHIKSLSEEVRNAKAAVDLAQREVERNPMSDVLSHQA 136

Query: 122 GVATDAFWSAIRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDSEGIR 181
           G++T+ FW+A+R EEASLRQKS +RWL+LGDQN+AFFHRS+RSR+ RN L S+VDS+G R
Sbjct: 137 GLSTETFWTAVRLEEASLRQKSRIRWLKLGDQNTAFFHRSVRSRMSRNTLRSLVDSDGTR 196

Query: 182 ------------------------------------------------------------ 241
                                                                       
Sbjct: 197 EIGYRELSPVIDDIVQFQWSEECCQALQLPISREEVRRVLFSMDSGKAPGPDGFSAVGVN 256

Query: 242 ------------------------------------------------------------ 301
                                                                       
Sbjct: 257 ATAITLIPKHNGAERLEDFRPISCCNALYKCISKILADRLRAWLPSFISSNQSAFIPGRS 316

Query: 302 ------------------------------------------------------------ 303
                                                                       
Sbjct: 317 IIENILLCQELVGGYHLNSGKPRCTLKVDLQKAYDSVNWDFLFGLLIAIGTPLKFVSWIR 376

[Close]

BLAST of PI0008878 vs. ExPASy TrEMBL
Match: A0A5A7TWG5 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00450 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 1.3e-75
Identity = 178/395 (45.06%), Postives = 220/395 (55.70%), Query Frame = 0


Query: 32   RIISFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSPMQNLHDLKPVLRIHFGRHIRGLS 91
            +++SFRFFNHWVED SF +VV+  W R  GVSPLVS M+NLH LKP+LR  FGRHI+ L+
Sbjct: 757  KVVSFRFFNHWVEDPSFIEVVARRWSRHEGVSPLVSLMKNLHHLKPILRGRFGRHIKSLN 816

Query: 92   EEVRSAKEAMDRAQREVEQDPGSVERSRDAGVATDAFWSAIRQEEASLRQKSPVRWLELG 151
            E+VR AK AMD AQR+VE++P S   SR A +AT+ FW+A+R EEASLRQKS +RWL+LG
Sbjct: 817  EKVRIAKLAMDIAQRKVERNPMSDVLSRQASLATETFWTAVRLEEASLRQKSRIRWLKLG 876

Query: 152  DQNSAFFHRSIRSRIGRNNLLSIVDS--EGIRVTSHE----------------------- 211
            DQN+AFFHR + SR+ RN+LLS+VDS  +G RV+SH+                       
Sbjct: 877  DQNTAFFHRFVYSRMSRNSLLSLVDSDGDGSRVSSHDGVVHMAALQLPISREEVRRVLLT 936

Query: 212  -----------------------------------------RP----------------- 271
                                                     RP                 
Sbjct: 937  MDSGKAPGPDGFSLGFFKVWVNATAITLIPKHNGAERLEDFRPISCFDLQKAYDSVNWDF 996

Query: 272  -----------------------------------------SLDFKYHHRCKKVCLTHLT 303
                                                        F++HHRC+KV LTHLT
Sbjct: 997  LFGLLIAIGTLLKKGVRQGDPLSPFLFVMVMEVLSRMLNKIPQSFQFHHRCEKVKLTHLT 1056

[Close]

BLAST of PI0008878 vs. ExPASy TrEMBL
Match: A0A5D3D5X6 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00380 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 1.3e-75
Identity = 178/395 (45.06%), Postives = 220/395 (55.70%), Query Frame = 0


Query: 32   RIISFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSPMQNLHDLKPVLRIHFGRHIRGLS 91
            +++SFRFFNHWVED SF +VV+  W R  GVSPLVS M+NLH LKP+LR  FGRHI+ L+
Sbjct: 756  KVVSFRFFNHWVEDPSFIEVVARRWSRHEGVSPLVSLMKNLHHLKPILRGRFGRHIKSLN 815

Query: 92   EEVRSAKEAMDRAQREVEQDPGSVERSRDAGVATDAFWSAIRQEEASLRQKSPVRWLELG 151
            E+VR AK AMD AQR+VE++P S   SR A +AT+ FW+A+R EEASLRQKS +RWL+LG
Sbjct: 816  EKVRIAKLAMDIAQRKVERNPMSDVLSRQASLATETFWTAVRLEEASLRQKSRIRWLKLG 875

Query: 152  DQNSAFFHRSIRSRIGRNNLLSIVDS--EGIRVTSHE----------------------- 211
            DQN+AFFHR + SR+ RN+LLS+VDS  +G RV+SH+                       
Sbjct: 876  DQNTAFFHRFVYSRMSRNSLLSLVDSDGDGSRVSSHDGVVHMAALQLPISREEVRRVLLT 935

Query: 212  -----------------------------------------RP----------------- 271
                                                     RP                 
Sbjct: 936  MDSGKAPGPDGFSLGFFKVWVNATAITLIPKHNGAERLEDFRPISCFDLQKAYDSVNWDF 995

Query: 272  -----------------------------------------SLDFKYHHRCKKVCLTHLT 303
                                                        F++HHRC+KV LTHLT
Sbjct: 996  LFGLLIAIGTLLKKGVRQGDPLSPFLFVMVMEVLSRMLNKIPQSFQFHHRCEKVKLTHLT 1055

[Close]

BLAST of PI0008878 vs. ExPASy TrEMBL
Match: A0A5A7TZS0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19358G00020 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66
Identity = 191/575 (33.22%), Postives = 233/575 (40.52%), Query Frame = 0


Query: 2   AWPSLRVTVLPWGISDHSPILFYPAVEQQRRIISFRFFNHWVEDTSFSDVVSSVWVRRLG 61
           AWP++R+ VLPWGISDHSPILFYP+ +   R++SFRFFNHWVE+ SF +VV+ +W R  G
Sbjct: 172 AWPTMRINVLPWGISDHSPILFYPSFQVNSRVVSFRFFNHWVEEPSFIEVVARMWSRHEG 231

Query: 62  VSPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAMDRAQREVEQDPGSVERSRDA 121
           VS LVS M+NLH LKP+LR  FGRHI+ LSEEV  AKEAMD AQREVE++P S   SR A
Sbjct: 232 VSLLVSLMRNLHHLKPILRRQFGRHIKSLSEEVHIAKEAMDIAQREVERNPLSDVLSRQA 291

Query: 122 GVATDAFWSAIRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDSEGIR 181
            +AT+ FW+A+R EEASLRQKS VRWL LGDQN+AFFHRS+RSR+ RN+LLS+VDS+G R
Sbjct: 292 SLATETFWTAVRLEEASLRQKSKVRWLNLGDQNTAFFHRSVRSRLSRNSLLSLVDSDGSR 351

Query: 182 VTSHE------------------------RPSLD-------------------------- 241
           V+SH+                         P +D                          
Sbjct: 352 VSSHDGVAQMAVNYFSNSLGSQEIGYRELSPIIDDIVQFQWSEECCQALQLPISREEVRR 411

Query: 242 ------------------------------------------------------------ 301
                                                                       
Sbjct: 412 VLFSMDSGKAPGPDGFSVGFYKGAWSVVGEDFCNAVLHFFETCYLPIGVNATAITLIPKH 471

Query: 302 ------------------------------------------------------------ 303
                                                                       
Sbjct: 472 IGAERLEDFRPISCCNVLYKCISKILADRLRLWLPSFISSNQSAFIPGRSIIENILLCQE 531

[Close]

BLAST of PI0008878 vs. NCBI nr
Match: TYK26658.1 (uncharacterized protein E5676_scaffold313G003080 [Cucumis melo var. makuwa])

HSP 1 Score: 313.9 bits (803), Expect = 1.5e-81
Identity = 197/494 (39.88%), Postives = 241/494 (48.79%), Query Frame = 0


Query: 2   AWPSLRVTVLPWGISDHSPILFYPAVEQQRRIISFRFFNHWVEDTSFSDVVSSVWVRRLG 61
           AWP++ V VLPWGISDHSPILFYP+ +   +++SF FFNHWVED SF +VV+ +W R  G
Sbjct: 17  AWPTMLVNVLPWGISDHSPILFYPSFQINSKVVSFWFFNHWVEDPSFIEVVARMWNRHEG 76

Query: 62  VSPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAMDRAQREVEQDPGSVERSRDA 121
           VSP+VS M+NLH LKP++R  FGRHI+ LSEEVR+AK AMD AQREVE++P S   S  A
Sbjct: 77  VSPIVSLMRNLHHLKPIMRRRFGRHIKSLSEEVRNAKAAMDLAQREVERNPMSDVLSHQA 136

Query: 122 GVATDAFWSAIRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDSEGIR 181
           G++T+ FW+A+R EEASLRQKS +RWL+LGDQN+AFFHRS+RSR+ RN L S+VDS+G R
Sbjct: 137 GLSTETFWTAVRLEEASLRQKSRIRWLKLGDQNTAFFHRSVRSRMSRNTLRSLVDSDGTR 196

Query: 182 ------------------------------------------VTSHERPSLD-------- 241
                                                     + S + P  D        
Sbjct: 197 EIGYRELSPVIDDIVQFQWSEKCCQALQLPISREEVRRVLFSMDSGKAPGPDGFSAVGVN 256

Query: 242 ------------------------------------------------------------ 301
                                                                       
Sbjct: 257 ATAITLIPNGAERLEDFRPISCCNALYKCISKILADRLRAWLPSFISSNQSAFIPGRSII 316

Query: 302 ------------------------------------------------------------ 303
                                                                       
Sbjct: 317 ENILLCQELVGGYHLNSGKPRCTLKVDLQKAYDSVNWDFLFGLLIAIGTPLKKGVRQGDP 376

[Close]

BLAST of PI0008878 vs. NCBI nr
Match: KAA0062318.1 (uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa])

HSP 1 Score: 302.4 bits (773), Expect = 4.5e-78
Identity = 198/525 (37.71%), Postives = 243/525 (46.29%), Query Frame = 0


Query: 2   AWPSLRVTVLPWGISDHSPILFYPAVEQQRRIISFRFFNHWVEDTSFSDVVSSVWVRRLG 61
           AWP++ V VLPWGISDHSPILFYP+ +   +++SF FFNHWVED SF +VV+ +W R  G
Sbjct: 17  AWPTMLVNVLPWGISDHSPILFYPSFQINSKVVSFWFFNHWVEDPSFIEVVARMWNRHEG 76

Query: 62  VSPLVSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAMDRAQREVEQDPGSVERSRDA 121
           VSP+VS M+NLH LKP++R  FGRHI+ LSEEVR+AK A+D AQREVE++P S   S  A
Sbjct: 77  VSPIVSLMRNLHHLKPIMRRRFGRHIKSLSEEVRNAKAAVDLAQREVERNPMSDVLSHQA 136

Query: 122 GVATDAFWSAIRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDSEGIR 181
           G++T+ FW+A+R EEASLRQKS +RWL+LGDQN+AFFHRS+RSR+ RN L S+VDS+G R
Sbjct: 137 GLSTETFWTAVRLEEASLRQKSRIRWLKLGDQNTAFFHRSVRSRMSRNTLRSLVDSDGTR 196

Query: 182 ------------------------------------------------------------ 241
                                                                       
Sbjct: 197 EIGYRELSPVIDDIVQFQWSEECCQALQLPISREEVRRVLFSMDSGKAPGPDGFSAVGVN 256

Query: 242 ------------------------------------------------------------ 301
                                                                       
Sbjct: 257 ATAITLIPKHNGAERLEDFRPISCCNALYKCISKILADRLRAWLPSFISSNQSAFIPGRS 316

Query: 302 ------------------------------------------------------------ 303
                                                                       
Sbjct: 317 IIENILLCQELVGGYHLNSGKPRCTLKVDLQKAYDSVNWDFLFGLLIAIGTPLKFVSWIR 376

[Close]

BLAST of PI0008878 vs. NCBI nr
Match: TYK18951.1 (uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa])

HSP 1 Score: 293.1 bits (749), Expect = 2.7e-75
Identity = 178/395 (45.06%), Postives = 220/395 (55.70%), Query Frame = 0


Query: 32   RIISFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSPMQNLHDLKPVLRIHFGRHIRGLS 91
            +++SFRFFNHWVED SF +VV+  W R  GVSPLVS M+NLH LKP+LR  FGRHI+ L+
Sbjct: 756  KVVSFRFFNHWVEDPSFIEVVARRWSRHEGVSPLVSLMKNLHHLKPILRGRFGRHIKSLN 815

Query: 92   EEVRSAKEAMDRAQREVEQDPGSVERSRDAGVATDAFWSAIRQEEASLRQKSPVRWLELG 151
            E+VR AK AMD AQR+VE++P S   SR A +AT+ FW+A+R EEASLRQKS +RWL+LG
Sbjct: 816  EKVRIAKLAMDIAQRKVERNPMSDVLSRQASLATETFWTAVRLEEASLRQKSRIRWLKLG 875

Query: 152  DQNSAFFHRSIRSRIGRNNLLSIVDS--EGIRVTSHE----------------------- 211
            DQN+AFFHR + SR+ RN+LLS+VDS  +G RV+SH+                       
Sbjct: 876  DQNTAFFHRFVYSRMSRNSLLSLVDSDGDGSRVSSHDGVVHMAALQLPISREEVRRVLLT 935

Query: 212  -----------------------------------------RP----------------- 271
                                                     RP                 
Sbjct: 936  MDSGKAPGPDGFSLGFFKVWVNATAITLIPKHNGAERLEDFRPISCFDLQKAYDSVNWDF 995

Query: 272  -----------------------------------------SLDFKYHHRCKKVCLTHLT 303
                                                        F++HHRC+KV LTHLT
Sbjct: 996  LFGLLIAIGTLLKKGVRQGDPLSPFLFVMVMEVLSRMLNKIPQSFQFHHRCEKVKLTHLT 1055

[Close]

BLAST of PI0008878 vs. NCBI nr
Match: KAA0046247.1 (uncharacterized protein E6C27_scaffold284G00450 [Cucumis melo var. makuwa])

HSP 1 Score: 293.1 bits (749), Expect = 2.7e-75
Identity = 178/395 (45.06%), Postives = 220/395 (55.70%), Query Frame = 0


Query: 32   RIISFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSPMQNLHDLKPVLRIHFGRHIRGLS 91
            +++SFRFFNHWVED SF +VV+  W R  GVSPLVS M+NLH LKP+LR  FGRHI+ L+
Sbjct: 757  KVVSFRFFNHWVEDPSFIEVVARRWSRHEGVSPLVSLMKNLHHLKPILRGRFGRHIKSLN 816

Query: 92   EEVRSAKEAMDRAQREVEQDPGSVERSRDAGVATDAFWSAIRQEEASLRQKSPVRWLELG 151
            E+VR AK AMD AQR+VE++P S   SR A +AT+ FW+A+R EEASLRQKS +RWL+LG
Sbjct: 817  EKVRIAKLAMDIAQRKVERNPMSDVLSRQASLATETFWTAVRLEEASLRQKSRIRWLKLG 876

Query: 152  DQNSAFFHRSIRSRIGRNNLLSIVDS--EGIRVTSHE----------------------- 211
            DQN+AFFHR + SR+ RN+LLS+VDS  +G RV+SH+                       
Sbjct: 877  DQNTAFFHRFVYSRMSRNSLLSLVDSDGDGSRVSSHDGVVHMAALQLPISREEVRRVLLT 936

Query: 212  -----------------------------------------RP----------------- 271
                                                     RP                 
Sbjct: 937  MDSGKAPGPDGFSLGFFKVWVNATAITLIPKHNGAERLEDFRPISCFDLQKAYDSVNWDF 996

Query: 272  -----------------------------------------SLDFKYHHRCKKVCLTHLT 303
                                                        F++HHRC+KV LTHLT
Sbjct: 997  LFGLLIAIGTLLKKGVRQGDPLSPFLFVMVMEVLSRMLNKIPQSFQFHHRCEKVKLTHLT 1056

[Close]

BLAST of PI0008878 vs. NCBI nr
Match: XP_031740402.1 (uncharacterized protein LOC116403409 [Cucumis sativus] >XP_031740413.1 uncharacterized protein LOC116403417 [Cucumis sativus] >XP_031745405.1 uncharacterized protein LOC116405607 [Cucumis sativus] >XP_031745422.1 uncharacterized protein LOC116405638 [Cucumis sativus] >XP_031745640.1 uncharacterized protein LOC116406072 [Cucumis sativus])

HSP 1 Score: 268.1 bits (684), Expect = 9.3e-68
Identity = 176/488 (36.07%), Postives = 228/488 (46.72%), Query Frame = 0


Query: 6   LRVTVLPWGISDHSPILFYPAVEQQRRIISFRFFNHWVEDTSFSDVVSSVWVRRLGVSPL 65
           +RV VLPWGISDHSPIL YP+ ++ ++++SFRFFNHWV++ SF DVVSS W +   VSP+
Sbjct: 1   MRVNVLPWGISDHSPILVYPSNQRSQQVVSFRFFNHWVQEASFMDVVSSAWTKDTRVSPI 60

Query: 66  VSPMQNLHDLKPVLRIHFGRHIRGLSEEVRSAKEAMDRAQREVEQDPGSVERSRDAGVAT 125
           V+ ++NL +LK +LR HFGRHIR +SE+VR A + MDRA+RE+E +  S E S  A +AT
Sbjct: 61  VNIVRNLRNLKSILRRHFGRHIRTISEDVRLANDTMDRAEREMETNSLSEEASNHASLAT 120

Query: 126 DAFWSAIRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDSEGIRVTSH 185
             FW A+R EEA++RQKS  RWL+L DQN+AFFHRS+RSR   N L S++D +G R+T+H
Sbjct: 121 VNFWKAVRVEEAAMRQKSRTRWLKLDDQNTAFFHRSVRSRQSSNALRSVIDPDGNRLTNH 180

Query: 186 ER---------------------------------------------------------- 245
           ++                                                          
Sbjct: 181 DQVTQVVVNYFKDSLGSQNISYGELSTSIEEIVQFRWTEECCQALQSPIGREEVRRVLFS 240

Query: 246 ------PSLD------FK------------------------------------------ 303
                 P  D      FK                                          
Sbjct: 241 MDGGKAPGPDGYSVGFFKGAWTVVGEGFCDVVLHFFETNYFPQGVNTTAITLIPKRNGAD 300

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BLAST of PI0008878 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 53.9 bits (128), Expect = 2.6e-07
Identity = 41/171 (23.98%), Postives = 82/171 (47.95%), Query Frame = 0


Query: 14  GISDHSPILFYPAVEQQRRIISFRFFNHWVEDTSFSDVVSSVWVRRLGV-SPLVSPMQNL 73
           G+SDHSP +       +R    FR+F+      +F   ++  W  ++ V S + S  ++L
Sbjct: 310 GVSDHSPCIIILENLPKRSKKCFRYFSFLSTHPTFLVSLTVAWEEQIPVGSHMFSLGEHL 369

Query: 74  HDLKPVLRIHFGRHIRGLSEEVRSAKEAMDRAQREVEQDPG-SVERSRDAGVATDAFWSA 133
              K   ++   +    +  + + A ++++  Q ++  +P  S+ R          F++A
Sbjct: 370 KAAKKCCKLLNRQGFGNIQHKTKEALDSLESIQSQLLTNPSDSLFRVEHVARKKWNFFAA 429

Query: 134 IRQEEASLRQKSPVRWLELGDQNSAFFHRSIRSRIGRNNLLSIVDSEGIRV 183
               E+  RQKS ++WL+ GD N+ FFH+ I +   +N +  +   + +RV
Sbjct: 430 AL--ESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRV 478

[Close]

BLAST of PI0008878 vs. TAIR 10
Match: AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 42.7 bits (99), Expect = 5.9e-04
Identity = 23/53 (43.40%), Postives = 32/53 (60.38%), Query Frame = 0


Query: 250 VAGVDIEAATVLAGSMGFALGTLPVRYLGVPLLSGRLRASDCASLIQRITSRI 303
           +AGV       +  S  FA G LPVRYLG+PLL+ ++  SD   L+++I  RI
Sbjct: 1   MAGVKDNDKADILHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRI 53

The following BLAST results are available for this feature:

BLAST of PI0008878 vs.


Match Name	E-value	Identity	Description

BLAST of PI0008878 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DT20	7.2e-82	39.88	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5A7V3Z0	2.2e-78	37.71	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5A7TWG5	1.3e-75	45.06	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5D3D5X6	1.3e-75	45.06	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5A7TZS0	1.1e-66	33.22	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of PI0008878 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK26658.1	1.5e-81	39.88	uncharacterized protein E5676_scaffold313G003080 [Cucumis melo var. makuwa]	[more]
KAA0062318.1	4.5e-78	37.71	uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa]	[more]
TYK18951.1	2.7e-75	45.06	uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa]	[more]
KAA0046247.1	2.7e-75	45.06	uncharacterized protein E6C27_scaffold284G00450 [Cucumis melo var. makuwa]	[more]
XP_031740402.1	9.3e-68	36.07	uncharacterized protein LOC116403409 [Cucumis sativus] >XP_031740413.1 uncharact...	[more]

BLAST of PI0008878 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43760.1	2.6e-07	23.98	DNAse I-like superfamily protein	[more]
AT3G24255.1	5.9e-04	43.40	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 87..107
None	No IPR available	PANTHER	PTHR46890	NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED	coord: 201..270
None	No IPR available	PANTHER	PTHR46890:SF8	SUBFAMILY NOT NAMED	coord: 201..270

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0008878.1	PI0008878.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0003964	RNA-directed DNA polymerase activity