PI0008703 (gene) Melon (PI 482460) v1

Overview


Name	PI0008703
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	ANK_REP_REGION domain-containing protein
Location	chr12: 14945366 .. 14946546 (+)
RNA-Seq Expression	PI0008703
Synteny	PI0008703

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGCTCAAATAGATTATATATGGTGCCAAACCACCACACCTGAGAGTAATGACGTTGATTCCATCGGTATCCTTCGTCCCAAACATAACTGGAGCAGTGATACTGTCAAGGACGACTATCAGTACTTCAACATCTTAAGTAGTACCGAACCAGCATTAGAAAATAACAAACCAAAAATCAAAGAAGATGACATCGAATATTATGACTACCACGAAACCCCTCTCCTCCTCGCTGCTGCCAATGGAATCCTTGAAATCATCGAAGCAATCGTTGACGTTTACCCTCAAGCCATTGATTACGTAACGGATCTCCAAAGAAATGTGCTCCACGTGGCCATTGCTCACCGTCAATTAAAAGTGTTCGAGTGGATTCAAAAGCATAGACTAATCATGTCAAGGCTAGTCAAGCGAATCGATGTCTTCGGATTCACTGCACTCCACCACGTAGGCATAATGAATTTCTACTGCGGTGGGAATCACGGCCCTGCTTTACAACTTCAAGAAGAACTCAAATGGTATGAACGTGTAAAGTTTCATATCCCTGAGCCTTACAACATGCACCACAACAAAATGAAATGCACCCCTCGTCAATACTTCGAGTGTAAACATGAAGAAATGCTTGGAGAGGCTAAAGAATGGATCAAGAAAACCTCCGAGTCTTGTTCTGCAGTTGCCGTCCTTATTGCAACTGTTGTCTTCGCTTCTGCCTACACCGTCCCAGGTGGCCTCAATAGCAAGACTGGCTCTCCTATTCTCCTCGCTGAACCTATCTACACTGTCTTCACAATCATGGTCATTGTCGCACTCAGCAACTCCCTAACGTCCGTGGTTCTGTTTCTGTCAATTCTAACGTCATCATTTAAGATGGAGGCTTTTCTATTTTGGTTGCCGCTGAAACTGTCCCTTGGATTCCAGTTGTTGTTTTTCTCAGTGGCAACTACGATGATGGCGTTTGCATTGACGATTGTGTTGACGATGAAGTCGGAGGAGATGAAGTGGACGGTGAGTTTGTTGTATGTTGCAACATTTTTTCCAGTGAGCATGTTTATAATAATCCAGCTGCCTTTGTATGTGGATTTGGTGAAGAGTATTTGGAACTATCGCGGCAATGTTTTCAAGTTTCTTCCCACGGGTTTTTGTGTCCGGTTATGGAAGTTTCTTTCCAAAATGTCGGTTAG

mRNA sequence

ATGCTTGCTCAAATAGATTATATATGGTGCCAAACCACCACACCTGAGAGTAATGACGTTGATTCCATCGGTATCCTTCGTCCCAAACATAACTGGAGCAGTGATACTGTCAAGGACGACTATCAGTACTTCAACATCTTAAGTAGTACCGAACCAGCATTAGAAAATAACAAACCAAAAATCAAAGAAGATGACATCGAATATTATGACTACCACGAAACCCCTCTCCTCCTCGCTGCTGCCAATGGAATCCTTGAAATCATCGAAGCAATCGTTGACGTTTACCCTCAAGCCATTGATTACGTAACGGATCTCCAAAGAAATGTGCTCCACGTGGCCATTGCTCACCGTCAATTAAAAGTTGGCAACTACGATGATGGCGTTTGCATTGACGATTGTGTTGACGATGAAGTCGGAGGAGATGAAGTGGACGGTGAGTTTGTTGTATGTTGCAACATTTTTTCCAGTGAGCATGTTTATAATAATCCAGCTGCCTTTGTATGTGGATTTGGTGAAGAGTATTTGGAACTATCGCGGCAATGTTTTCAAGTTTCTTCCCACGGGTTTTTGTGTCCGGTTATGGAAGTTTCTTTCCAAAATGTCGGTTAG

Coding sequence (CDS)

ATGCTTGCTCAAATAGATTATATATGGTGCCAAACCACCACACCTGAGAGTAATGACGTTGATTCCATCGGTATCCTTCGTCCCAAACATAACTGGAGCAGTGATACTGTCAAGGACGACTATCAGTACTTCAACATCTTAAGTAGTACCGAACCAGCATTAGAAAATAACAAACCAAAAATCAAAGAAGATGACATCGAATATTATGACTACCACGAAACCCCTCTCCTCCTCGCTGCTGCCAATGGAATCCTTGAAATCATCGAAGCAATCGTTGACGTTTACCCTCAAGCCATTGATTACGTAACGGATCTCCAAAGAAATGTGCTCCACGTGGCCATTGCTCACCGTCAATTAAAAGTTGGCAACTACGATGATGGCGTTTGCATTGACGATTGTGTTGACGATGAAGTCGGAGGAGATGAAGTGGACGGTGAGTTTGTTGTATGTTGCAACATTTTTTCCAGTGAGCATGTTTATAATAATCCAGCTGCCTTTGTATGTGGATTTGGTGAAGAGTATTTGGAACTATCGCGGCAATGTTTTCAAGTTTCTTCCCACGGGTTTTTGTGTCCGGTTATGGAAGTTTCTTTCCAAAATGTCGGTTAG

Protein sequence

MLAQIDYIWCQTTTPESNDVDSIGILRPKHNWSSDTVKDDYQYFNILSSTEPALENNKPKIKEDDIEYYDYHETPLLLAAANGILEIIEAIVDVYPQAIDYVTDLQRNVLHVAIAHRQLKVGNYDDGVCIDDCVDDEVGGDEVDGEFVVCCNIFSSEHVYNNPAAFVCGFGEEYLELSRQCFQVSSHGFLCPVMEVSFQNVG

Homology

[Close]

BLAST of PI0008703 vs. ExPASy TrEMBL
Match: A0A0A0M140 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G700690 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 5.4e-41
Identity = 98/196 (50.00%), Postives = 126/196 (64.29%), Query Frame = 0


Query: 1   MLAQIDYIWCQT--TTPESNDVDSIGILRPKHNWSSDTVKDDYQYFNILSSTEPALENNK 60
           MLA ID+ W QT  T PE  +VDS G+  PK        + D      + +T P+ ++N+
Sbjct: 1   MLAHIDFSWRQTQATPPEITEVDSFGLPLPK--------EGDVDLH--ILTTHPSSDHNQ 60

Query: 61  PKIKEDDIEYYDYHETPLLLAAANGILEIIEAIVDVYPQAIDYVTDLQRNVLHVAIAHRQ 120
            +I   DIE+Y++HETPLLLAAANGI+EI++ IV+V+PQA+DYVT               
Sbjct: 61  GEI--GDIEFYEHHETPLLLAAANGIIEIVQQIVEVFPQAVDYVT--------------- 120

Query: 121 LKVGNYDDGVCIDDCVDDEVGGDEVDGEFVVCCNIFSSEHVYNNPAAFVCGFGEEYLELS 180
                +DDG+CIDDCVD EV GDEVDGEFVV  ++FS +HVYNN A  VCG  EEYLE+ 
Sbjct: 121 -----HDDGICIDDCVDSEVRGDEVDGEFVVYGDVFSGDHVYNNSAPSVCGISEEYLEIW 164

Query: 181 RQCFQVSSHGFLCPVM 195
            Q FQVSSHG  C ++
Sbjct: 181 PQDFQVSSHGVSCSML 164

[Close]

BLAST of PI0008703 vs. ExPASy TrEMBL
Match: A0A6J1FII8 (uncharacterized protein LOC111446049 OS=Cucurbita moschata OX=3662 GN=LOC111446049 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.4e-17
Identity = 56/121 (46.28%), Postives = 78/121 (64.46%), Query Frame = 0


Query: 2   LAQIDYIWCQT-TTPESNDVDSIGILRPKHNWSSDTVKDDYQYFNILSSTEPALENNKPK 61
           LAQID  W +T  TP++ ++DSIGI          ++ D+ +  +IL      + NN+ +
Sbjct: 301 LAQIDNSWRKTKVTPDTTEIDSIGI----------SLSDENEKLDILEIQSKPV-NNQGE 360

Query: 62  IKEDDIEYYDYHETPLLLAAANGILEIIEAIVDVYPQAIDYVTDLQRNVLHVAIAHRQLK 121
           I   D EY D+HETPLLLAAANGI+EI++ I    PQA+DY+T   RN+LHVAIAHR+  
Sbjct: 361 I--PDFEYNDHHETPLLLAAANGIIEIVDEIFQANPQAVDYLTVQDRNILHVAIAHRRKN 408

[Close]

BLAST of PI0008703 vs. ExPASy TrEMBL
Match: A0A6J1IIM4 (uncharacterized protein LOC111474320 OS=Cucurbita maxima OX=3661 GN=LOC111474320 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 9.2e-17
Identity = 55/121 (45.45%), Postives = 74/121 (61.16%), Query Frame = 0


Query: 2   LAQIDYIWCQT-TTPESNDVDSIGILRPKHNWSSDTVKDDYQYFNILSSTEPALENNKPK 61
           LAQID  W +T  TP++ ++DS GI R   N   D ++            +    NN+ +
Sbjct: 301 LAQIDNSWRKTKVTPDTTEIDSTGISRSDENEKLDILQ-----------IQSIPINNQGE 360

Query: 62  IKEDDIEYYDYHETPLLLAAANGILEIIEAIVDVYPQAIDYVTDLQRNVLHVAIAHRQLK 121
           I   D EY D+HETPLLLAAANGI+EI++ I    PQA+DY+T   RN+LHVAIAHR+  
Sbjct: 361 I--PDFEYNDHHETPLLLAAANGIIEIVDEIFQANPQAVDYLTVHDRNILHVAIAHRRKN 408

[Close]

BLAST of PI0008703 vs. ExPASy TrEMBL
Match: A0A6J1IIE1 (uncharacterized protein LOC111473443 OS=Cucurbita maxima OX=3661 GN=LOC111473443 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 6.0e-16
Identity = 54/121 (44.63%), Postives = 73/121 (60.33%), Query Frame = 0


Query: 2   LAQIDYIWCQT-TTPESNDVDSIGILRPKHNWSSDTVKDDYQYFNILSSTEPALENNKPK 61
           LAQID  W +T  TP++ ++DS GI R   N   D ++            +    NN+ +
Sbjct: 301 LAQIDNSWRKTKVTPDTTEIDSTGISRSDENEKLDILQ-----------IQSIPINNQGE 360

Query: 62  IKEDDIEYYDYHETPLLLAAANGILEIIEAIVDVYPQAIDYVTDLQRNVLHVAIAHRQLK 121
           I   D EY D+HETPLLLAAANGI+EI++ I    P A+DY+T   RN+LHVAIAHR+  
Sbjct: 361 I--PDFEYNDHHETPLLLAAANGIIEIVDEIFQANPLAVDYLTVHDRNILHVAIAHRRKN 408

[Close]

BLAST of PI0008703 vs. ExPASy TrEMBL
Match: A0A5A7TMX3 (Protein ACCELERATED CELL DEATH 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00880 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.0e-15
Identity = 44/56 (78.57%), Postives = 51/56 (91.07%), Query Frame = 0


Query: 66  IEYYDYHETPLLLAAANGILEIIEAIVDVYPQAIDYVTDLQRNVLHVAIAHRQLKV 122
           +EYYD+HETPLLLAAANGI+EI++ IV VYPQA+DYVT  QRNVLHVAIAHRQ +V
Sbjct: 1   MEYYDHHETPLLLAAANGIIEIVQQIVHVYPQAVDYVTVNQRNVLHVAIAHRQKQV 56

[Close]

BLAST of PI0008703 vs. NCBI nr
Match: XP_038894050.1 (uncharacterized protein LOC120082801 isoform X2 [Benincasa hispida])

HSP 1 Score: 125.2 bits (313), Expect = 6.5e-25
Identity = 68/126 (53.97%), Postives = 90/126 (71.43%), Query Frame = 0


Query: 1   MLAQIDYIWCQT--TTPESNDVDSIGILRPKHNWSSDTVKDDYQYFNILSSTEPALENNK 60
           MLA +D+ W QT  T PE+ +VDS+GI RP      +         NIL  T+P+ + N+
Sbjct: 254 MLAHVDFSWRQTQLTPPENTEVDSLGIHRPNEGNGVN--------LNIL-RTQPSSDQNQ 313

Query: 61  PKIKEDDIEYYDYHETPLLLAAANGILEIIEAIVDVYPQAIDYVTDLQRNVLHVAIAHRQ 120
            ++  +DIEYYD+HETPLLLAAANGI+EI++ IV+VYPQA+DY+T  QRNVLHVAIA+RQ
Sbjct: 314 GEV--EDIEYYDHHETPLLLAAANGIIEIVQQIVEVYPQAVDYLTVHQRNVLHVAIAYRQ 368

Query: 121 LKVGNY 125
             V N+
Sbjct: 374 KTVFNW 368

[Close]

BLAST of PI0008703 vs. NCBI nr
Match: XP_038894049.1 (uncharacterized protein LOC120082801 isoform X1 [Benincasa hispida])

HSP 1 Score: 125.2 bits (313), Expect = 6.5e-25
Identity = 68/126 (53.97%), Postives = 90/126 (71.43%), Query Frame = 0


Query: 1   MLAQIDYIWCQT--TTPESNDVDSIGILRPKHNWSSDTVKDDYQYFNILSSTEPALENNK 60
           MLA +D+ W QT  T PE+ +VDS+GI RP      +         NIL  T+P+ + N+
Sbjct: 307 MLAHVDFSWRQTQLTPPENTEVDSLGIHRPNEGNGVN--------LNIL-RTQPSSDQNQ 366

Query: 61  PKIKEDDIEYYDYHETPLLLAAANGILEIIEAIVDVYPQAIDYVTDLQRNVLHVAIAHRQ 120
            ++  +DIEYYD+HETPLLLAAANGI+EI++ IV+VYPQA+DY+T  QRNVLHVAIA+RQ
Sbjct: 367 GEV--EDIEYYDHHETPLLLAAANGIIEIVQQIVEVYPQAVDYLTVHQRNVLHVAIAYRQ 421

Query: 121 LKVGNY 125
             V N+
Sbjct: 427 KTVFNW 421

[Close]

BLAST of PI0008703 vs. NCBI nr
Match: KAE8653649.1 (hypothetical protein Csa_006883 [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 5.2e-22
Identity = 64/123 (52.03%), Postives = 86/123 (69.92%), Query Frame = 0


Query: 1   MLAQIDYIWCQT--TTPESNDVDSIGILRPKHNWSSDTVKDDYQYFNILSSTEPALENNK 60
           MLA ID+ W QT  T PE  +VDS G+  PK        + D      + +T P+ ++N+
Sbjct: 1   MLAHIDFSWRQTQATPPEITEVDSFGLPLPK--------EGDVDLH--ILTTHPSSDHNQ 60

Query: 61  PKIKEDDIEYYDYHETPLLLAAANGILEIIEAIVDVYPQAIDYVTDLQRNVLHVAIAHRQ 120
            +I   DIE+Y++HETPLLLAAANGI+EI++ IV+V+PQA+DYVT  QRN+LHVAIAHRQ
Sbjct: 61  GEI--GDIEFYEHHETPLLLAAANGIIEIVQQIVEVFPQAVDYVTVHQRNLLHVAIAHRQ 111

Query: 121 LKV 122
            +V
Sbjct: 121 KQV 111

[Close]

BLAST of PI0008703 vs. NCBI nr
Match: XP_031739511.1 (uncharacterized protein LOC101203890 [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 5.2e-22
Identity = 64/123 (52.03%), Postives = 86/123 (69.92%), Query Frame = 0


Query: 1   MLAQIDYIWCQT--TTPESNDVDSIGILRPKHNWSSDTVKDDYQYFNILSSTEPALENNK 60
           MLA ID+ W QT  T PE  +VDS G+  PK        + D      + +T P+ ++N+
Sbjct: 310 MLAHIDFSWRQTQATPPEITEVDSFGLPLPK--------EGDVDLH--ILTTHPSSDHNQ 369

Query: 61  PKIKEDDIEYYDYHETPLLLAAANGILEIIEAIVDVYPQAIDYVTDLQRNVLHVAIAHRQ 120
            +I   DIE+Y++HETPLLLAAANGI+EI++ IV+V+PQA+DYVT  QRN+LHVAIAHRQ
Sbjct: 370 GEI--GDIEFYEHHETPLLLAAANGIIEIVQQIVEVFPQAVDYVTVHQRNLLHVAIAHRQ 420

Query: 121 LKV 122
            +V
Sbjct: 430 KQV 420

[Close]

BLAST of PI0008703 vs. NCBI nr
Match: KAE8653644.1 (hypothetical protein Csa_007665 [Cucumis sativus])

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-18
Identity = 47/78 (60.26%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 122 GNYDDGVCIDDCVDDEVGGDEVDGEFVVCCNIFSSEHVYNNPAAFVCGFGEEYLELSRQC 181
           G Y+DG+ IDDCVD+++ GDEVD EFV+ C+I S +HVY N   FVCG G++Y+ELS + 
Sbjct: 90  GEYNDGIRIDDCVDNKIEGDEVDDEFVIYCDISSGDHVYYNSTTFVCGVGKKYMELSPKY 149

Query: 182 FQVSSHGFLCPVMEVSFQ 200
           FQVSSHGF C V+  SFQ
Sbjct: 150 FQVSSHGFSCFVLGTSFQ 167

The following BLAST results are available for this feature:

BLAST of PI0008703 vs.


Match Name	E-value	Identity	Description

BLAST of PI0008703 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M140	5.4e-41	50.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G700690 PE=4 SV=1	[more]
A0A6J1FII8	1.4e-17	46.28	uncharacterized protein LOC111446049 OS=Cucurbita moschata OX=3662 GN=LOC1114460...	[more]
A0A6J1IIM4	9.2e-17	45.45	uncharacterized protein LOC111474320 OS=Cucurbita maxima OX=3661 GN=LOC111474320...	[more]
A0A6J1IIE1	6.0e-16	44.63	uncharacterized protein LOC111473443 OS=Cucurbita maxima OX=3661 GN=LOC111473443...	[more]
A0A5A7TMX3	1.0e-15	78.57	Protein ACCELERATED CELL DEATH 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of PI0008703 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894050.1	6.5e-25	53.97	uncharacterized protein LOC120082801 isoform X2 [Benincasa hispida]	[more]
XP_038894049.1	6.5e-25	53.97	uncharacterized protein LOC120082801 isoform X1 [Benincasa hispida]	[more]
KAE8653649.1	5.2e-22	52.03	hypothetical protein Csa_006883 [Cucumis sativus]	[more]
XP_031739511.1	5.2e-22	52.03	uncharacterized protein LOC101203890 [Cucumis sativus]	[more]
KAE8653644.1	1.2e-18	60.26	hypothetical protein Csa_007665 [Cucumis sativus]	[more]

BLAST of PI0008703 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 18..137 e-value: 1.0E-5 score: 27.0
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 70..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0008703.1	PI0008703.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane