PI0008647 (gene) Melon (PI 482460) v1

Overview


Name	PI0008647
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	LINE-1 retrotransposable element ORF2 protein
Location	chr06: 28449053 .. 28450684 (+)
RNA-Seq Expression	PI0008647
Synteny	PI0008647

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAGAGGTTGAATGATGAGATAAAGTCAAGCAAATAAATTTTGGGACACTTACAAAAATAGCAAAAAAATTTATGATAATAGGATCCATGTCACTACATTTTTTAAATTGCAAAAATAGCAAATTTAAAAGTGGATAACCCTCTGATAACCCTCTAATAGCATTCTGATAGTCGTCTGATAGTGATAAAGCACTACTATTCTTTGATGACCCAACCCAAGCAAAACTTCTCTGTAACAATCAAAAATCCGGCTGGTCTACTGTGGGGAATTTCTATGTCAAATTTGAATTCTAGAATAAAGAAATTCATGCAAATTTCAGACTTATTCCCAGTTATGGTGGGTGGACTGCTTTCAGAGGGATACCCTTACATGCATGGAACTTAGAAACTTTTAAGCAAATTGGCAGTGCATGTGGGGGCTTTATCTCTGTGGCTAAGGAAACTAATGACTTGTCATCAATTGTGGAAGCTCATATCAAAATTAAGCATAATTACACGGGCTTCATCCCAGCATCCATTTGCATTACTGATCAAGAGGGACTTCAACATACTGTCCACCCGGTTGCCCCTGCTGAAGGTAAATGGCTGGTTAAAAGACATGCCCAGATTCACAACTCTTTTACCAGACAGGCCGCAAAAGCTTTTGATGAAATTAATCCAGATGAGGAACAGTATCTTTTCATCGGAAGTCAAGCTTTCCCGCCGAATTTTTTTGAATCCAACTTGAAGAAAGGTTTAATTGCTGAGATGACATGCACAGAAAATCCCCCTTTGTCCAAGACAAATAATGAAGTTAATCAGTCAGGCTGCAAACGGGACTCCAGAATTGTGGATAGATGGAGGGAGAAGGGCAAAAATAAGGTGTTCGATAATGATGAGATATCTGAGAAGGAAGATCCTTCCTTATCCTCATTTAAGAACCCTGACACTTCACTTAATACTGCTTCATCAAAGAAAATAGTTAGTTTTACATCCCCCAGGAACAAAACCTTCTTTTATTACCCGGATCATGCTCCAGCTAAGCAATTAAATGTTGAAGTACTGCGCTCAAAAGAATTAAAAAATCCATCAAAACTTTCTCCACCCAAGATTCCTCCACCAAAGATTCATTCTCCAAAGACAAGGGCCCAACAGAAATACTACAGAGCTAAGAAAAGGCCCAATACAAACCTGGAAATCCAACCTTTACAGATGGTATTTAATGAGTGTGACAAAAATGTTTGCAATTTGACAGTGGACTTGGGGATCATTTCCCCTCTAAATGACAACTCAGCTGGGCCTGTAAATGGACAAGAGACTTTGGAAAATATTGTTGTTACAAGCCCAGTAGCAACTCTTGAGTCCCTCCCACATTGTCGTGTCTCACTACCAAGGAAATCCAAGCAATCCTTAATCAAAGAAAAGCCCAAAGTTAACCAGAGGGACTCAGTCAGAAAAGAAGCTTTTGTTGAAGAGAGTATAGAATTTAAAAAGCAGCTAGTTAGTTGGTTGAAAGCAAACAATTTGAAGTTAGCCCCTTCAGCAGCAACCGATTGTCCAAGCTCCTCTACTCTAGAGACAGATATGGTTCAGGAAGACTTTGTTCTAGCTGGAAGTAATGAAGACCAGGGTAATCACGGTCTAGAATGA

mRNA sequence

ATGTTAGAGAATAAAGAAATTCATGCAAATTTCAGACTTATTCCCAGTTATGGTGGGTGGACTGCTTTCAGAGGGATACCCTTACATGCATGGAACTTAGAAACTTTTAAGCAAATTGGCAGTGCATGTGGGGGCTTTATCTCTGTGGCTAAGGAAACTAATGACTTGTCATCAATTGTGGAAGCTCATATCAAAATTAAGCATAATTACACGGGCTTCATCCCAGCATCCATTTGCATTACTGATCAAGAGGGACTTCAACATACTGTCCACCCGGTTGCCCCTGCTGAAGGTAAATGGCTGGTTAAAAGACATGCCCAGATTCACAACTCTTTTACCAGACAGGCCGCAAAAGCTTTTGATGAAATTAATCCAGATGAGGAACAGTATCTTTTCATCGGAAGTCAAGCTTTCCCGCCGAATTTTTTTGAATCCAACTTGAAGAAAGGTTTAATTGCTGAGATGACATGCACAGAAAATCCCCCTTTGTCCAAGACAAATAATGAAGTTAATCAGTCAGGCTGCAAACGGGACTCCAGAATTGTGGATAGATGGAGGGAGAAGGGCAAAAATAAGGTGTTCGATAATGATGAGATATCTGAGAAGGAAGATCCTTCCTTATCCTCATTTAAGAACCCTGACACTTCACTTAATACTGCTTCATCAAAGAAAATAGTTAGTTTTACATCCCCCAGGAACAAAACCTTCTTTTATTACCCGGATCATGCTCCAGCTAAGCAATTAAATGTTGAAGTACTGCGCTCAAAAGAATTAAAAAATCCATCAAAACTTTCTCCACCCAAGATTCCTCCACCAAAGATTCATTCTCCAAAGACAAGGGCCCAACAGAAATACTACAGAGCTAAGAAAAGGCCCAATACAAACCTGGAAATCCAACCTTTACAGATGGTATTTAATGAGTGTGACAAAAATGTTTGCAATTTGACAGTGGACTTGGGGATCATTTCCCCTCTAAATGACAACTCAGCTGGGCCTGTAAATGGACAAGAGACTTTGGAAAATATTGTTGTTACAAGCCCAGTAGCAACTCTTGAGTCCCTCCCACATTGTCGTGTCTCACTACCAAGGAAATCCAAGCAATCCTTAATCAAAGAAAAGCCCAAAGTTAACCAGAGGGACTCAGTCAGAAAAGAAGCTTTTGTTGAAGAGAGTATAGAATTTAAAAAGCAGCTAGTTAGTTGGTTGAAAGCAAACAATTTGAAGTTAGCCCCTTCAGCAGCAACCGATTGTCCAAGCTCCTCTACTCTAGAGACAGATATGGTTCAGGAAGACTTTGTTCTAGCTGGAAGTAATGAAGACCAGGGTAATCACGGTCTAGAATGA

Coding sequence (CDS)

ATGTTAGAGAATAAAGAAATTCATGCAAATTTCAGACTTATTCCCAGTTATGGTGGGTGGACTGCTTTCAGAGGGATACCCTTACATGCATGGAACTTAGAAACTTTTAAGCAAATTGGCAGTGCATGTGGGGGCTTTATCTCTGTGGCTAAGGAAACTAATGACTTGTCATCAATTGTGGAAGCTCATATCAAAATTAAGCATAATTACACGGGCTTCATCCCAGCATCCATTTGCATTACTGATCAAGAGGGACTTCAACATACTGTCCACCCGGTTGCCCCTGCTGAAGGTAAATGGCTGGTTAAAAGACATGCCCAGATTCACAACTCTTTTACCAGACAGGCCGCAAAAGCTTTTGATGAAATTAATCCAGATGAGGAACAGTATCTTTTCATCGGAAGTCAAGCTTTCCCGCCGAATTTTTTTGAATCCAACTTGAAGAAAGGTTTAATTGCTGAGATGACATGCACAGAAAATCCCCCTTTGTCCAAGACAAATAATGAAGTTAATCAGTCAGGCTGCAAACGGGACTCCAGAATTGTGGATAGATGGAGGGAGAAGGGCAAAAATAAGGTGTTCGATAATGATGAGATATCTGAGAAGGAAGATCCTTCCTTATCCTCATTTAAGAACCCTGACACTTCACTTAATACTGCTTCATCAAAGAAAATAGTTAGTTTTACATCCCCCAGGAACAAAACCTTCTTTTATTACCCGGATCATGCTCCAGCTAAGCAATTAAATGTTGAAGTACTGCGCTCAAAAGAATTAAAAAATCCATCAAAACTTTCTCCACCCAAGATTCCTCCACCAAAGATTCATTCTCCAAAGACAAGGGCCCAACAGAAATACTACAGAGCTAAGAAAAGGCCCAATACAAACCTGGAAATCCAACCTTTACAGATGGTATTTAATGAGTGTGACAAAAATGTTTGCAATTTGACAGTGGACTTGGGGATCATTTCCCCTCTAAATGACAACTCAGCTGGGCCTGTAAATGGACAAGAGACTTTGGAAAATATTGTTGTTACAAGCCCAGTAGCAACTCTTGAGTCCCTCCCACATTGTCGTGTCTCACTACCAAGGAAATCCAAGCAATCCTTAATCAAAGAAAAGCCCAAAGTTAACCAGAGGGACTCAGTCAGAAAAGAAGCTTTTGTTGAAGAGAGTATAGAATTTAAAAAGCAGCTAGTTAGTTGGTTGAAAGCAAACAATTTGAAGTTAGCCCCTTCAGCAGCAACCGATTGTCCAAGCTCCTCTACTCTAGAGACAGATATGGTTCAGGAAGACTTTGTTCTAGCTGGAAGTAATGAAGACCAGGGTAATCACGGTCTAGAATGA

Protein sequence

MLENKEIHANFRLIPSYGGWTAFRGIPLHAWNLETFKQIGSACGGFISVAKETNDLSSIVEAHIKIKHNYTGFIPASICITDQEGLQHTVHPVAPAEGKWLVKRHAQIHNSFTRQAAKAFDEINPDEEQYLFIGSQAFPPNFFESNLKKGLIAEMTCTENPPLSKTNNEVNQSGCKRDSRIVDRWREKGKNKVFDNDEISEKEDPSLSSFKNPDTSLNTASSKKIVSFTSPRNKTFFYYPDHAPAKQLNVEVLRSKELKNPSKLSPPKIPPPKIHSPKTRAQQKYYRAKKRPNTNLEIQPLQMVFNECDKNVCNLTVDLGIISPLNDNSAGPVNGQETLENIVVTSPVATLESLPHCRVSLPRKSKQSLIKEKPKVNQRDSVRKEAFVEESIEFKKQLVSWLKANNLKLAPSAATDCPSSSTLETDMVQEDFVLAGSNEDQGNHGLE

Homology

[Close]

BLAST of PI0008647 vs. ExPASy TrEMBL
Match: A0A5D3DJE1 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G001100 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 4.7e-53
Identity = 151/441 (34.24%), Postives = 227/441 (51.47%), Query Frame = 0


Query: 8   HANFRLIPSYGGWTAFRGIPLHAWNLETFKQIGSACGGFISVAKETNDLSSIVEAHIKIK 67
           HA  +LIPSYGGWT FRGIPLH WN+ TF+QIG ACGG I VA+ET    +++EA IK++
Sbjct: 277 HATPKLIPSYGGWTTFRGIPLHLWNMTTFQQIGKACGGLIKVAEETKSAKNLIEARIKVR 336

Query: 68  HNYTGFIPASICITDQEGLQHTVHPVAPAEGKWLVKRHAQIHNSFTRQAAKAFDEINPDE 127
           +NY+GF+PA++ I D EG + ++  V   EGKWL++R+ ++H +F RQAA  FD+ NP+ 
Sbjct: 337 YNYSGFLPANVRIFDNEGNKFSIQVVTHPEGKWLIERNVRLHGTFKRQAAATFDDFNPES 396

Query: 128 EQYLFIGSQAFPPNFF--ESNLKKGLIAEMTCTENPPLSKTNNEVNQSGCKRDSRIVDRW 187
           EQ+ F G +A  P+F    S+ +K    +        + K +          +  + D  
Sbjct: 397 EQFFFEGMEAISPDFLSTSSDDRKSSTPDQPSALKSVIIKPDRAATSPSFLNEEVVNDSN 456

Query: 188 REKGKNKV-------FDNDEISEKEDPSLSSFKNPDTSLNTASSKKIVSFTSPRNKTFFY 247
                NK          ND + +K    +     P+++LN   SK+ VSF SP NKT  +
Sbjct: 457 LHATVNKSKLEILPGISNDGVLDKGKQKVDIQLQPNSALNLDKSKRKVSFNSPCNKTNIF 516

Query: 248 YPDHAPAKQLNVEVLRSKELKNPSKLSPPKIPPPKIHSPKTRAQQKYYRAKKRPNTNLEI 307
            PD APA         S  L +P K    K+   +    +  + Q   +A ++ +  L  
Sbjct: 517 NPDSAPAN-------HSPSLSSPEK--KQKVSRERSIKKRLPSTQPNSKANQKKDV-LIT 576

Query: 308 QPLQMVFN--ECDKNVCNLTVDLGIISPLNDNSAGPVNGQETLENIVVTSPVATLESLPH 367
           QP+Q+V +  E  K   +LTVDLG +  L+ N +   +       ++  +    +   P 
Sbjct: 577 QPIQIVAHDREASKKGLSLTVDLGDLPVLDPNKSFEDHHSSDNAEVIDITNTEVVPETPE 636

Query: 368 CRVSLPRKSKQS--LIKEKPK-VNQRD-SVRKEAFVE---ESIEFKKQLVSWLKANNLKL 427
            ++ +   S  S      KPK V++R    RK+   E   +S  FKKQLVSWLK N LKL
Sbjct: 637 MKMQVNENSNSSSEANYRKPKHVHKRKYYYRKKEEKEKDPDSEAFKKQLVSWLKENGLKL 696

Query: 428 APSAATDCPSSSTLETDMVQE 431
             S  TD   ++T    ++ +
Sbjct: 697 --STVTDSSGATTSTNVLINQ 705

[Close]

BLAST of PI0008647 vs. ExPASy TrEMBL
Match: A0A5D3BLV7 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005290 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 4.7e-53
Identity = 153/434 (35.25%), Postives = 224/434 (51.61%), Query Frame = 0


Query: 8   HANFRLIPSYGGWTAFRGIPLHAWNLETFKQIGSACGGFISVAKETNDLSSIVEAHIKIK 67
           HA  +LIPSYGGWT FRGIPLH WN+ TF+QIG AC G I VA+ET    +++EA IK++
Sbjct: 333 HATPKLIPSYGGWTTFRGIPLHLWNMMTFQQIGKACEGLIKVAEETRSAKNLIEARIKVR 392

Query: 68  HNYTGFIPASICITDQEGLQHTVHPVAPAEGKWLVKRHAQIHNSFTRQAAKAFDEINPDE 127
           +NY+GF+PA++ I D EG +  V  V   EGKWL++R+ ++H +F RQAA +FD+ NP+ 
Sbjct: 393 YNYSGFLPANVRIFDNEGNKFFVQVVTHPEGKWLIERNVRLHGTFKRQAAASFDDFNPES 452

Query: 128 EQYLFIGSQAFPPNFF--ESNLKKGLIAEMTCTENPPLSKTNNEVNQSGCKRDSRIVDRW 187
           EQ+ F GS+A  P+F    S+ +K    +        + K +          +  + D  
Sbjct: 453 EQFFFEGSEAISPDFLSTSSDGRKSSTPDQPSALKSVIIKPDRNATLPSFLNEELVNDSN 512

Query: 188 REKGKNKV-------FDNDEISEKEDPSLSSFKNPDTSLNTASSKKIVSFTSPRNKTFFY 247
                NK          ND + +K    +     P+++LN   SK+ VSF SP NKT  +
Sbjct: 513 LHATANKSKLEILSGISNDGVLDKGKQKVDIQLQPNSALNLDKSKRKVSFNSPSNKTNIF 572

Query: 248 YPDHAPAKQLNVEVLRSKELKNPSKLSPPKIPPPKIHSPKTRAQQKYYRAKKRPNTNLEI 307
            PD APA         S  L +P K    K    +  S K ++      +K   N  + I
Sbjct: 573 NPDSAPAN-------HSPSLNSPEK----KQKVSRERSIKKKSSSTQPNSKANQNKGVFI 632

Query: 308 -QPLQMVFNECD--KNVCNLTVDLGIISPLNDNSAGPVNGQETLENIVVTSPVATLESLP 367
            QP+Q+V ++ D  K   +LTVDLG +  L+ N +   +       +V  +    +   P
Sbjct: 633 TQPIQIVAHDRDAAKKGLSLTVDLGDLPALDPNKSLEDHHNSDNAEVVDITNTEVVPETP 692

Query: 368 HCRVSLPRKSKQS--LIKEKPK-VNQRD-SVRKEAFVE---ESIEFKKQLVSWLKANNLK 423
             ++ +   S  S      KPK V++R    RK+   E   +S  FKKQLVSWLK N LK
Sbjct: 693 EMKMPVNENSNSSSEANYRKPKHVHKRKYYYRKKEEKEKDPDSEAFKKQLVSWLKKNGLK 752

[Close]

BLAST of PI0008647 vs. ExPASy TrEMBL
Match: A0A5A7TDG1 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G001050 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 6.1e-53
Identity = 154/436 (35.32%), Postives = 220/436 (50.46%), Query Frame = 0


Query: 8   HANFRLIPSYGGWTAFRGIPLHAWNLETFKQIGSACGGFISVAKETNDLSSIVEAHIKIK 67
           HA+ +LIPSYGGWT FRGIPLH WN+ TF+QIG ACGG I VA+ET    +++EA +KI+
Sbjct: 279 HASPKLIPSYGGWTTFRGIPLHLWNMMTFQQIGKACGGLIKVAEETKTARNLIEAKLKIR 338

Query: 68  HNYTGFIPASICITDQEGLQHTVHPVAPAEGKWLVKRHAQIHNSFTRQAAKAFDEINPDE 127
           +NY+GF+PA + I DQEG +  V  V  +EGKWL++R+ ++H +F RQAA +FD+ NPD 
Sbjct: 339 YNYSGFLPAYVKIFDQEGNKFVVQVVTHSEGKWLMERNVRLHGTFKRQAAASFDDFNPDS 398

Query: 128 EQYLFIGSQAFPPNFFE--SNLKKGLIAEMTCTENPPLSKTNNEVNQSGCKRDSRIVDR- 187
           EQ+LF G +A  P+     S  +K +  E        + K            +  + D  
Sbjct: 399 EQFLFDGLEAISPDLLNTISGSRKSISPEQPSALKSVIIKPAKYATSPTTLNEEVVNDNS 458

Query: 188 ---WREKGKNKV---FDNDEISEKEDPSLSSFKNPDTSLNTASSKKIVSFTSPRNKTFFY 247
                 K K K+     ND   +K    +       ++      K+ VSF SP NKT F+
Sbjct: 459 LHATANKSKLKILSGISNDGSLDKGKQKVDIPSQLTSAFIFYKPKRKVSFNSPSNKTTFF 518

Query: 248 YPDHAPAK---QLNVEVLRSKELKNPSKLSPPKIPPPKIHSPKTRAQQKYYRAKKRPNTN 307
            PD APA    +    V R + +K  S    PK+          RA Q           N
Sbjct: 519 NPDSAPANHSPEKKKRVSRERSVKKKSSTIQPKL----------RANQ--------GKGN 578

Query: 308 LEIQPLQMVFNECD--KNVCNLTVDLGIISPLNDNSAGPVNGQETLENIVVTSPVATLES 367
           L  QPLQ+V ++ D  K   +LTVDLG +  L+ + +   +       ++  +    +  
Sbjct: 579 LITQPLQVVAHDLDASKKGLSLTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPE 638

Query: 368 LPHCRVSLPRKSKQS----LIKEKPKVNQRDSVRKEAFVEE---SIEFKKQLVSWLKANN 423
            P  +++ P KS  S      K+K    +R   RK+   E+   S  FK QLV+WLK N 
Sbjct: 639 TPELKMTDPEKSNSSPEVNYRKQKHSHRRRHYYRKKEDKEKDTNSEAFKNQLVTWLKENG 694

[Close]

BLAST of PI0008647 vs. ExPASy TrEMBL
Match: A0A5D3BL61 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001020 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 6.1e-53
Identity = 154/436 (35.32%), Postives = 220/436 (50.46%), Query Frame = 0


Query: 8   HANFRLIPSYGGWTAFRGIPLHAWNLETFKQIGSACGGFISVAKETNDLSSIVEAHIKIK 67
           HA+ +LIPSYGGWT FRGIPLH WN+ TF+QIG ACGG I VA+ET    +++EA +KI+
Sbjct: 279 HASPKLIPSYGGWTTFRGIPLHLWNMMTFQQIGKACGGLIKVAEETKTARNLIEAKLKIR 338

Query: 68  HNYTGFIPASICITDQEGLQHTVHPVAPAEGKWLVKRHAQIHNSFTRQAAKAFDEINPDE 127
           +NY+GF+PA + I DQEG +  V  V  +EGKWL++R+ ++H +F RQAA +FD+ NPD 
Sbjct: 339 YNYSGFLPAYVKIFDQEGNKFVVQVVTHSEGKWLMERNVRLHGTFKRQAAASFDDFNPDS 398

Query: 128 EQYLFIGSQAFPPNFFE--SNLKKGLIAEMTCTENPPLSKTNNEVNQSGCKRDSRIVDR- 187
           EQ+LF G +A  P+     S  +K +  E        + K            +  + D  
Sbjct: 399 EQFLFDGLEAISPDLLNTISGSRKSISPEQPSALKSVIIKPAKYATSPTTLNEEVVNDNS 458

Query: 188 ---WREKGKNKV---FDNDEISEKEDPSLSSFKNPDTSLNTASSKKIVSFTSPRNKTFFY 247
                 K K K+     ND   +K    +       ++      K+ VSF SP NKT F+
Sbjct: 459 LHATANKSKLKILSGISNDGSLDKGKQKVDIPSQLTSAFIFYKPKRKVSFNSPSNKTTFF 518

Query: 248 YPDHAPAK---QLNVEVLRSKELKNPSKLSPPKIPPPKIHSPKTRAQQKYYRAKKRPNTN 307
            PD APA    +    V R + +K  S    PK+          RA Q           N
Sbjct: 519 NPDSAPANHSPEKKKRVSRERSVKKKSSTIQPKL----------RANQ--------GKGN 578

Query: 308 LEIQPLQMVFNECD--KNVCNLTVDLGIISPLNDNSAGPVNGQETLENIVVTSPVATLES 367
           L  QPLQ+V ++ D  K   +LTVDLG +  L+ + +   +       ++  +    +  
Sbjct: 579 LITQPLQVVAHDLDASKKGLSLTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPE 638

Query: 368 LPHCRVSLPRKSKQS----LIKEKPKVNQRDSVRKEAFVEE---SIEFKKQLVSWLKANN 423
            P  +++ P KS  S      K+K    +R   RK+   E+   S  FK QLV+WLK N 
Sbjct: 639 TPELKMTDPEKSNSSPEVNYRKQKHSHRRRHYYRKKEDKEKDTNSEAFKNQLVTWLKENG 694

[Close]

BLAST of PI0008647 vs. ExPASy TrEMBL
Match: A0A5D3DKV0 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00050 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.0e-52
Identity = 149/444 (33.56%), Postives = 228/444 (51.35%), Query Frame = 0


Query: 8   HANFRLIPSYGGWTAFRGIPLHAWNLETFKQIGSACGGFISVAKETNDLSSIVEAHIKIK 67
           HA  +LIPSYGGWT FRGIPLH WN+ TF+Q+G ACGG I VA+ET    ++V+A IK++
Sbjct: 277 HATPKLIPSYGGWTTFRGIPLHLWNMTTFQQLGKACGGLIKVAEETRSAKNLVKARIKVR 336

Query: 68  HNYTGFIPASICITDQEGLQHTVHPVAPAEGKWLVKRHAQIHNSFTRQAAKAFDEINPDE 127
           +NY+GF+PA++ I D EG + ++  V   EGKWL++R+ ++H +F RQAA AFDE NP+ 
Sbjct: 337 YNYSGFLPANVRIFDNEGNKFSIQVVTHPEGKWLIERNVRLHGTFKRQAAAAFDEFNPES 396

Query: 128 EQYLFIGSQAFPPNFFESNLKKGLIAEMTCTENPPLSKT----NNEVNQSGCKRDSRIVD 187
           EQ+ F G +A  P+F  ++       +    + PP  K+    ++ V  S    +  +V+
Sbjct: 397 EQFFFEGMEAISPDFLSTSSDG---RKSNTPDQPPALKSVIIKSDRVATSPSFLNEEVVN 456

Query: 188 -----RWREKGKNKV---FDNDEISEKEDPSLSSFKNPDTSLNTASSKKIVSFTSPRNKT 247
                    K K+++     ND + +K    +     P+++LN   SK+ VSF SP NKT
Sbjct: 457 DSNLHATANKSKSEILPGISNDGVLDKGKQKVDIQLQPNSALNLDKSKRKVSFNSPCNKT 516

Query: 248 FFYYPDHAPAKQLNVEVLRSKELKNPSKLSPPKIPPPKIHSPKTRAQQKYYRAKKRPNTN 307
             + PD APA                             HSP   + +K  +  K+   +
Sbjct: 517 NIFNPDSAPAN----------------------------HSPSLSSPEKKQKLPKK--VS 576

Query: 308 LEIQPLQMVFN--ECDKNVCNLTVDLGIISPLNDNSAGPVNGQETLENIVVTSPVATLES 367
              QP+Q+V +  E  K   +LTVDLG +  L+ N +   +       ++  +    +  
Sbjct: 577 XITQPIQIVAHDREASKKGLSLTVDLGDLPVLDPNKSFEDHHSSDNAEVIDITNTEVVPE 636

Query: 368 LPHCRVSLPRKSKQS--LIKEKPK-VNQRD-SVRKEAFVE---ESIEFKKQLVSWLKANN 427
            P  ++ +   S  S      KPK V++R    RK+   E   +S  FKKQL SWLK N 
Sbjct: 637 TPEMKMQVNENSNSSSEANYRKPKHVHKRKYYYRKKEEKEKDPDSKAFKKQLASWLKENG 685

Query: 428 LKLAPSAATDCPSSSTLETDMVQE 431
           LK+  S  TD   ++T    ++ +
Sbjct: 697 LKI--STVTDSSGATTSTNVLINQ 685

[Close]

BLAST of PI0008647 vs. NCBI nr
Match: TYJ99315.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 218.8 bits (556), Expect = 9.6e-53
Identity = 153/434 (35.25%), Postives = 224/434 (51.61%), Query Frame = 0


Query: 8   HANFRLIPSYGGWTAFRGIPLHAWNLETFKQIGSACGGFISVAKETNDLSSIVEAHIKIK 67
           HA  +LIPSYGGWT FRGIPLH WN+ TF+QIG AC G I VA+ET    +++EA IK++
Sbjct: 333 HATPKLIPSYGGWTTFRGIPLHLWNMMTFQQIGKACEGLIKVAEETRSAKNLIEARIKVR 392

Query: 68  HNYTGFIPASICITDQEGLQHTVHPVAPAEGKWLVKRHAQIHNSFTRQAAKAFDEINPDE 127
           +NY+GF+PA++ I D EG +  V  V   EGKWL++R+ ++H +F RQAA +FD+ NP+ 
Sbjct: 393 YNYSGFLPANVRIFDNEGNKFFVQVVTHPEGKWLIERNVRLHGTFKRQAAASFDDFNPES 452

Query: 128 EQYLFIGSQAFPPNFF--ESNLKKGLIAEMTCTENPPLSKTNNEVNQSGCKRDSRIVDRW 187
           EQ+ F GS+A  P+F    S+ +K    +        + K +          +  + D  
Sbjct: 453 EQFFFEGSEAISPDFLSTSSDGRKSSTPDQPSALKSVIIKPDRNATLPSFLNEELVNDSN 512

Query: 188 REKGKNKV-------FDNDEISEKEDPSLSSFKNPDTSLNTASSKKIVSFTSPRNKTFFY 247
                NK          ND + +K    +     P+++LN   SK+ VSF SP NKT  +
Sbjct: 513 LHATANKSKLEILSGISNDGVLDKGKQKVDIQLQPNSALNLDKSKRKVSFNSPSNKTNIF 572

Query: 248 YPDHAPAKQLNVEVLRSKELKNPSKLSPPKIPPPKIHSPKTRAQQKYYRAKKRPNTNLEI 307
            PD APA         S  L +P K    K    +  S K ++      +K   N  + I
Sbjct: 573 NPDSAPAN-------HSPSLNSPEK----KQKVSRERSIKKKSSSTQPNSKANQNKGVFI 632

Query: 308 -QPLQMVFNECD--KNVCNLTVDLGIISPLNDNSAGPVNGQETLENIVVTSPVATLESLP 367
            QP+Q+V ++ D  K   +LTVDLG +  L+ N +   +       +V  +    +   P
Sbjct: 633 TQPIQIVAHDRDAAKKGLSLTVDLGDLPALDPNKSLEDHHNSDNAEVVDITNTEVVPETP 692

Query: 368 HCRVSLPRKSKQS--LIKEKPK-VNQRD-SVRKEAFVE---ESIEFKKQLVSWLKANNLK 423
             ++ +   S  S      KPK V++R    RK+   E   +S  FKKQLVSWLK N LK
Sbjct: 693 EMKMPVNENSNSSSEANYRKPKHVHKRKYYYRKKEEKEKDPDSEAFKKQLVSWLKKNGLK 752

[Close]

BLAST of PI0008647 vs. NCBI nr
Match: TYK23598.1 (hypothetical protein E5676_scaffold500G001100 [Cucumis melo var. makuwa])

HSP 1 Score: 218.8 bits (556), Expect = 9.6e-53
Identity = 151/441 (34.24%), Postives = 227/441 (51.47%), Query Frame = 0


Query: 8   HANFRLIPSYGGWTAFRGIPLHAWNLETFKQIGSACGGFISVAKETNDLSSIVEAHIKIK 67
           HA  +LIPSYGGWT FRGIPLH WN+ TF+QIG ACGG I VA+ET    +++EA IK++
Sbjct: 277 HATPKLIPSYGGWTTFRGIPLHLWNMTTFQQIGKACGGLIKVAEETKSAKNLIEARIKVR 336

Query: 68  HNYTGFIPASICITDQEGLQHTVHPVAPAEGKWLVKRHAQIHNSFTRQAAKAFDEINPDE 127
           +NY+GF+PA++ I D EG + ++  V   EGKWL++R+ ++H +F RQAA  FD+ NP+ 
Sbjct: 337 YNYSGFLPANVRIFDNEGNKFSIQVVTHPEGKWLIERNVRLHGTFKRQAAATFDDFNPES 396

Query: 128 EQYLFIGSQAFPPNFF--ESNLKKGLIAEMTCTENPPLSKTNNEVNQSGCKRDSRIVDRW 187
           EQ+ F G +A  P+F    S+ +K    +        + K +          +  + D  
Sbjct: 397 EQFFFEGMEAISPDFLSTSSDDRKSSTPDQPSALKSVIIKPDRAATSPSFLNEEVVNDSN 456

Query: 188 REKGKNKV-------FDNDEISEKEDPSLSSFKNPDTSLNTASSKKIVSFTSPRNKTFFY 247
                NK          ND + +K    +     P+++LN   SK+ VSF SP NKT  +
Sbjct: 457 LHATVNKSKLEILPGISNDGVLDKGKQKVDIQLQPNSALNLDKSKRKVSFNSPCNKTNIF 516

Query: 248 YPDHAPAKQLNVEVLRSKELKNPSKLSPPKIPPPKIHSPKTRAQQKYYRAKKRPNTNLEI 307
            PD APA         S  L +P K    K+   +    +  + Q   +A ++ +  L  
Sbjct: 517 NPDSAPAN-------HSPSLSSPEK--KQKVSRERSIKKRLPSTQPNSKANQKKDV-LIT 576

Query: 308 QPLQMVFN--ECDKNVCNLTVDLGIISPLNDNSAGPVNGQETLENIVVTSPVATLESLPH 367
           QP+Q+V +  E  K   +LTVDLG +  L+ N +   +       ++  +    +   P 
Sbjct: 577 QPIQIVAHDREASKKGLSLTVDLGDLPVLDPNKSFEDHHSSDNAEVIDITNTEVVPETPE 636

Query: 368 CRVSLPRKSKQS--LIKEKPK-VNQRD-SVRKEAFVE---ESIEFKKQLVSWLKANNLKL 427
            ++ +   S  S      KPK V++R    RK+   E   +S  FKKQLVSWLK N LKL
Sbjct: 637 MKMQVNENSNSSSEANYRKPKHVHKRKYYYRKKEEKEKDPDSEAFKKQLVSWLKENGLKL 696

Query: 428 APSAATDCPSSSTLETDMVQE 431
             S  TD   ++T    ++ +
Sbjct: 697 --STVTDSSGATTSTNVLINQ 705

[Close]

BLAST of PI0008647 vs. NCBI nr
Match: KAA0039309.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 218.4 bits (555), Expect = 1.3e-52
Identity = 154/436 (35.32%), Postives = 220/436 (50.46%), Query Frame = 0


Query: 8   HANFRLIPSYGGWTAFRGIPLHAWNLETFKQIGSACGGFISVAKETNDLSSIVEAHIKIK 67
           HA+ +LIPSYGGWT FRGIPLH WN+ TF+QIG ACGG I VA+ET    +++EA +KI+
Sbjct: 279 HASPKLIPSYGGWTTFRGIPLHLWNMMTFQQIGKACGGLIKVAEETKTARNLIEAKLKIR 338

Query: 68  HNYTGFIPASICITDQEGLQHTVHPVAPAEGKWLVKRHAQIHNSFTRQAAKAFDEINPDE 127
           +NY+GF+PA + I DQEG +  V  V  +EGKWL++R+ ++H +F RQAA +FD+ NPD 
Sbjct: 339 YNYSGFLPAYVKIFDQEGNKFVVQVVTHSEGKWLMERNVRLHGTFKRQAAASFDDFNPDS 398

Query: 128 EQYLFIGSQAFPPNFFE--SNLKKGLIAEMTCTENPPLSKTNNEVNQSGCKRDSRIVDR- 187
           EQ+LF G +A  P+     S  +K +  E        + K            +  + D  
Sbjct: 399 EQFLFDGLEAISPDLLNTISGSRKSISPEQPSALKSVIIKPAKYATSPTTLNEEVVNDNS 458

Query: 188 ---WREKGKNKV---FDNDEISEKEDPSLSSFKNPDTSLNTASSKKIVSFTSPRNKTFFY 247
                 K K K+     ND   +K    +       ++      K+ VSF SP NKT F+
Sbjct: 459 LHATANKSKLKILSGISNDGSLDKGKQKVDIPSQLTSAFIFYKPKRKVSFNSPSNKTTFF 518

Query: 248 YPDHAPAK---QLNVEVLRSKELKNPSKLSPPKIPPPKIHSPKTRAQQKYYRAKKRPNTN 307
            PD APA    +    V R + +K  S    PK+          RA Q           N
Sbjct: 519 NPDSAPANHSPEKKKRVSRERSVKKKSSTIQPKL----------RANQ--------GKGN 578

Query: 308 LEIQPLQMVFNECD--KNVCNLTVDLGIISPLNDNSAGPVNGQETLENIVVTSPVATLES 367
           L  QPLQ+V ++ D  K   +LTVDLG +  L+ + +   +       ++  +    +  
Sbjct: 579 LITQPLQVVAHDLDASKKGLSLTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPE 638

Query: 368 LPHCRVSLPRKSKQS----LIKEKPKVNQRDSVRKEAFVEE---SIEFKKQLVSWLKANN 423
            P  +++ P KS  S      K+K    +R   RK+   E+   S  FK QLV+WLK N 
Sbjct: 639 TPELKMTDPEKSNSSPEVNYRKQKHSHRRRHYYRKKEDKEKDTNSEAFKNQLVTWLKENG 694

[Close]

BLAST of PI0008647 vs. NCBI nr
Match: TYK00493.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 218.4 bits (555), Expect = 1.3e-52
Identity = 154/436 (35.32%), Postives = 220/436 (50.46%), Query Frame = 0


Query: 8   HANFRLIPSYGGWTAFRGIPLHAWNLETFKQIGSACGGFISVAKETNDLSSIVEAHIKIK 67
           HA+ +LIPSYGGWT FRGIPLH WN+ TF+QIG ACGG I VA+ET    +++EA +KI+
Sbjct: 279 HASPKLIPSYGGWTTFRGIPLHLWNMMTFQQIGKACGGLIKVAEETKTARNLIEAKLKIR 338

Query: 68  HNYTGFIPASICITDQEGLQHTVHPVAPAEGKWLVKRHAQIHNSFTRQAAKAFDEINPDE 127
           +NY+GF+PA + I DQEG +  V  V  +EGKWL++R+ ++H +F RQAA +FD+ NPD 
Sbjct: 339 YNYSGFLPAYVKIFDQEGNKFVVQVVTHSEGKWLMERNVRLHGTFKRQAAASFDDFNPDS 398

Query: 128 EQYLFIGSQAFPPNFFE--SNLKKGLIAEMTCTENPPLSKTNNEVNQSGCKRDSRIVDR- 187
           EQ+LF G +A  P+     S  +K +  E        + K            +  + D  
Sbjct: 399 EQFLFDGLEAISPDLLNTISGSRKSISPEQPSALKSVIIKPAKYATSPTTLNEEVVNDNS 458

Query: 188 ---WREKGKNKV---FDNDEISEKEDPSLSSFKNPDTSLNTASSKKIVSFTSPRNKTFFY 247
                 K K K+     ND   +K    +       ++      K+ VSF SP NKT F+
Sbjct: 459 LHATANKSKLKILSGISNDGSLDKGKQKVDIPSQLTSAFIFYKPKRKVSFNSPSNKTTFF 518

Query: 248 YPDHAPAK---QLNVEVLRSKELKNPSKLSPPKIPPPKIHSPKTRAQQKYYRAKKRPNTN 307
            PD APA    +    V R + +K  S    PK+          RA Q           N
Sbjct: 519 NPDSAPANHSPEKKKRVSRERSVKKKSSTIQPKL----------RANQ--------GKGN 578

Query: 308 LEIQPLQMVFNECD--KNVCNLTVDLGIISPLNDNSAGPVNGQETLENIVVTSPVATLES 367
           L  QPLQ+V ++ D  K   +LTVDLG +  L+ + +   +       ++  +    +  
Sbjct: 579 LITQPLQVVAHDLDASKKGLSLTVDLGNLPVLDPSKSFEDHHSSDNAEVIDITNTEVVPE 638

Query: 368 LPHCRVSLPRKSKQS----LIKEKPKVNQRDSVRKEAFVEE---SIEFKKQLVSWLKANN 423
            P  +++ P KS  S      K+K    +R   RK+   E+   S  FK QLV+WLK N 
Sbjct: 639 TPELKMTDPEKSNSSPEVNYRKQKHSHRRRHYYRKKEDKEKDTNSEAFKNQLVTWLKENG 694

[Close]

BLAST of PI0008647 vs. NCBI nr
Match: TYK24247.1 (hypothetical protein E5676_scaffold205G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 217.6 bits (553), Expect = 2.1e-52
Identity = 149/444 (33.56%), Postives = 228/444 (51.35%), Query Frame = 0


Query: 8   HANFRLIPSYGGWTAFRGIPLHAWNLETFKQIGSACGGFISVAKETNDLSSIVEAHIKIK 67
           HA  +LIPSYGGWT FRGIPLH WN+ TF+Q+G ACGG I VA+ET    ++V+A IK++
Sbjct: 277 HATPKLIPSYGGWTTFRGIPLHLWNMTTFQQLGKACGGLIKVAEETRSAKNLVKARIKVR 336

Query: 68  HNYTGFIPASICITDQEGLQHTVHPVAPAEGKWLVKRHAQIHNSFTRQAAKAFDEINPDE 127
           +NY+GF+PA++ I D EG + ++  V   EGKWL++R+ ++H +F RQAA AFDE NP+ 
Sbjct: 337 YNYSGFLPANVRIFDNEGNKFSIQVVTHPEGKWLIERNVRLHGTFKRQAAAAFDEFNPES 396

Query: 128 EQYLFIGSQAFPPNFFESNLKKGLIAEMTCTENPPLSKT----NNEVNQSGCKRDSRIVD 187
           EQ+ F G +A  P+F  ++       +    + PP  K+    ++ V  S    +  +V+
Sbjct: 397 EQFFFEGMEAISPDFLSTSSDG---RKSNTPDQPPALKSVIIKSDRVATSPSFLNEEVVN 456

Query: 188 -----RWREKGKNKV---FDNDEISEKEDPSLSSFKNPDTSLNTASSKKIVSFTSPRNKT 247
                    K K+++     ND + +K    +     P+++LN   SK+ VSF SP NKT
Sbjct: 457 DSNLHATANKSKSEILPGISNDGVLDKGKQKVDIQLQPNSALNLDKSKRKVSFNSPCNKT 516

Query: 248 FFYYPDHAPAKQLNVEVLRSKELKNPSKLSPPKIPPPKIHSPKTRAQQKYYRAKKRPNTN 307
             + PD APA                             HSP   + +K  +  K+   +
Sbjct: 517 NIFNPDSAPAN----------------------------HSPSLSSPEKKQKLPKK--VS 576

Query: 308 LEIQPLQMVFN--ECDKNVCNLTVDLGIISPLNDNSAGPVNGQETLENIVVTSPVATLES 367
              QP+Q+V +  E  K   +LTVDLG +  L+ N +   +       ++  +    +  
Sbjct: 577 XITQPIQIVAHDREASKKGLSLTVDLGDLPVLDPNKSFEDHHSSDNAEVIDITNTEVVPE 636

Query: 368 LPHCRVSLPRKSKQS--LIKEKPK-VNQRD-SVRKEAFVE---ESIEFKKQLVSWLKANN 427
            P  ++ +   S  S      KPK V++R    RK+   E   +S  FKKQL SWLK N 
Sbjct: 637 TPEMKMQVNENSNSSSEANYRKPKHVHKRKYYYRKKEEKEKDPDSKAFKKQLASWLKENG 685

Query: 428 LKLAPSAATDCPSSSTLETDMVQE 431
           LK+  S  TD   ++T    ++ +
Sbjct: 697 LKI--STVTDSSGATTSTNVLINQ 685

The following BLAST results are available for this feature:

BLAST of PI0008647 vs.


Match Name	E-value	Identity	Description

BLAST of PI0008647 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DJE1	4.7e-53	34.24	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3BLV7	4.7e-53	35.25	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7TDG1	6.1e-53	35.32	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5D3BL61	6.1e-53	35.32	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5D3DKV0	1.0e-52	33.56	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of PI0008647 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ99315.1	9.6e-53	35.25	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]
TYK23598.1	9.6e-53	34.24	hypothetical protein E5676_scaffold500G001100 [Cucumis melo var. makuwa]	[more]
KAA0039309.1	1.3e-52	35.32	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]
TYK00493.1	1.3e-52	35.32	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]
TYK24247.1	2.1e-52	33.56	hypothetical protein E5676_scaffold205G00050 [Cucumis melo var. makuwa]	[more]

BLAST of PI0008647 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 20..66 e-value: 1.6E-9 score: 37.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 428..447
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..280
None	No IPR available	PANTHER	PTHR34427:SF5	DUF4283 DOMAIN PROTEIN	coord: 14..203
None	No IPR available	PANTHER	PTHR34427	DUF4283 DOMAIN PROTEIN	coord: 14..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0008647.1	PI0008647.1	mRNA