PI0008645 (gene) Melon (PI 482460) v1

Overview


Name	PI0008645
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr02: 20230405 .. 20230987 (+)
RNA-Seq Expression	PI0008645
Synteny	PI0008645

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAACACTTAGTCCCTATTTTCTCCCACCAACCAAACACACAGCTTCCCTCCTATATCTAATTCAATCCTTCTCTTAACCATTTCCACGCTTAAATTGAAATCATGGCCACCTCAATTAAGCTAACAATCATATTCCTAGTTTGCATAGCCATTTTAGCGTTACCCGTGATGGCACGTACCACGACAACGCTTGATCAATTCACAATCAAGGATTTTGCATCGGTGAACTGCACGGTGTTTACTTTCGAGGCGACGAAATGTATGATTGAGGTGATGAAGAATTCAATTCCTCCTCATCCTTCATGTTGCAGAGCCATTCTTAAGCTTAACGACTGTAATCCCGAGGTTTACAAAGATGTTCCCTCTGCTGACAAGAAATTGGTTAAGAAGATTTGTGCTTTGTGGGGTGTTTGATCGATTTCTTATGCTAAAGGTTGTTTGAGTTAATTGGATCATAATGAATAAGAGAAAACTATCATTTTGTTACCTACATCAGTAGTGTTTTATAAATTTAAGGAAGAGTGGATTTTGTTTCCATTTGAAATATGAGAATTAGTATTTTTTTATTTTTACTGTTTGTCA

mRNA sequence

TCAACACTTAGTCCCTATTTTCTCCCACCAACCAAACACACAGCTTCCCTCCTATATCTAATTCAATCCTTCTCTTAACCATTTCCACGCTTAAATTGAAATCATGGCCACCTCAATTAAGCTAACAATCATATTCCTAGTTTGCATAGCCATTTTAGCGTTACCCGTGATGGCACGTACCACGACAACGCTTGATCAATTCACAATCAAGGATTTTGCATCGGTGAACTGCACGGTGTTTACTTTCGAGGCGACGAAATGTATGATTGAGGTGATGAAGAATTCAATTCCTCCTCATCCTTCATGTTGCAGAGCCATTCTTAAGCTTAACGACTGTAATCCCGAGGTTTACAAAGATGTTCCCTCTGCTGACAAGAAATTGGTTAAGAAGATTTGTGCTTTGTGGGGTGTTTGATCGATTTCTTATGCTAAAGGTTGTTTGAGTTAATTGGATCATAATGAATAAGAGAAAACTATCATTTTGTTACCTACATCAGTAGTGTTTTATAAATTTAAGGAAGAGTGGATTTTGTTTCCATTTGAAATATGAGAATTAGTATTTTTTTATTTTTACTGTTTGTCA

Coding sequence (CDS)

ATGGCCACCTCAATTAAGCTAACAATCATATTCCTAGTTTGCATAGCCATTTTAGCGTTACCCGTGATGGCACGTACCACGACAACGCTTGATCAATTCACAATCAAGGATTTTGCATCGGTGAACTGCACGGTGTTTACTTTCGAGGCGACGAAATGTATGATTGAGGTGATGAAGAATTCAATTCCTCCTCATCCTTCATGTTGCAGAGCCATTCTTAAGCTTAACGACTGTAATCCCGAGGTTTACAAAGATGTTCCCTCTGCTGACAAGAAATTGGTTAAGAAGATTTGTGCTTTGTGGGGTGTTTGA

Protein sequence

MATSIKLTIIFLVCIAILALPVMARTTTTLDQFTIKDFASVNCTVFTFEATKCMIEVMKNSIPPHPSCCRAILKLNDCNPEVYKDVPSADKKLVKKICALWGV

Homology

[Close]

BLAST of PI0008645 vs. ExPASy TrEMBL
Match: A0A5A7U471 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00640 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 5.9e-44
Identity = 90/103 (87.38%), Postives = 97/103 (94.17%), Query Frame = 0


Query: 1   MATSIKLTIIFLVCIAILALPVMARTTTTLDQFTIKDFASVNCTVFTFEATKCMIEVMKN 60
           MA S+K+ +IFLVCIAIL LPVMART TTLDQF +KDFASVNCTVFTFEATKCMI+VMKN
Sbjct: 1   MAASMKVPLIFLVCIAILTLPVMARTVTTLDQFVMKDFASVNCTVFTFEATKCMIDVMKN 60

Query: 61  SIPPHPSCCRAILKLNDCNPEVYKDVPSADKKLVKKICALWGV 104
           S+PPHPSCCRAILKLNDCNPE YKDVPSADK+LVKKICALWGV
Sbjct: 61  SMPPHPSCCRAILKLNDCNPEAYKDVPSADKELVKKICALWGV 103

[Close]

BLAST of PI0008645 vs. ExPASy TrEMBL
Match: A0A0A0LTE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G263980 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.9e-43
Identity = 89/102 (87.25%), Postives = 94/102 (92.16%), Query Frame = 0


Query: 1   MATSIKLTIIFLVCIAILALPVMARTTTTLDQFTIKDFASVNCTVFTFEATKCMIEVMKN 60
           M  S+KL IIFLVCIAILALPVM RTTTTLDQF+ KD ASVNCTVFTFEATKCMI+VMKN
Sbjct: 1   MVASLKLPIIFLVCIAILALPVMTRTTTTLDQFSTKDVASVNCTVFTFEATKCMIDVMKN 60

Query: 61  SIPPHPSCCRAILKLNDCNPEVYKDVPSADKKLVKKICALWG 103
           S+PPHPSCCRAILKLNDCNPEVYKDVPS DKKL+KKIC LWG
Sbjct: 61  SMPPHPSCCRAILKLNDCNPEVYKDVPSTDKKLIKKICELWG 102

[Close]

BLAST of PI0008645 vs. ExPASy TrEMBL
Match: A0A5D3CG41 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00010 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 9.8e-23
Identity = 57/102 (55.88%), Postives = 74/102 (72.55%), Query Frame = 0


Query: 4   SIKLTIIFLVCIAILALPVMART--TTTLDQFTIKDFASVNCTVFTFEATKCMIEVMKNS 63
           SIKL ++F VC+AILA+  +A T      D FT ++ + + CT F  EATKC+I+VMKN+
Sbjct: 3   SIKLPLVFFVCMAILAVSGIAHTGAAAPSDPFTAEELSLLGCTSFISEATKCVIDVMKNA 62

Query: 64  IPPHPSCCRAILKLNDCNPEVYKDVPSADKKLVKKICALWGV 104
           + PHPSCC+A  KLNDC+PE  K +PSAD  L+K ICALWGV
Sbjct: 63  VAPHPSCCKAFSKLNDCSPEFLKGIPSADMILIKGICALWGV 104

[Close]

BLAST of PI0008645 vs. ExPASy TrEMBL
Match: A0A5A7U483 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00620 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 2.2e-22
Identity = 57/102 (55.88%), Postives = 73/102 (71.57%), Query Frame = 0


Query: 4   SIKLTIIFLVCIAILALPVMART--TTTLDQFTIKDFASVNCTVFTFEATKCMIEVMKNS 63
           SIKL ++F VC+AILA+  +A T      D FT +  + + CT F  EATKC+I+VMKN+
Sbjct: 3   SIKLPLVFFVCMAILAVSGIAHTGAAAPSDPFTAEKLSLLGCTSFISEATKCVIDVMKNA 62

Query: 64  IPPHPSCCRAILKLNDCNPEVYKDVPSADKKLVKKICALWGV 104
           + PHPSCC+A  KLNDC+PE  K +PSAD  L+K ICALWGV
Sbjct: 63  VAPHPSCCKAFSKLNDCSPEFLKGIPSADMILIKGICALWGV 104

[Close]

BLAST of PI0008645 vs. ExPASy TrEMBL
Match: A0A5D3CFS6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00210 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 3.3e-18
Identity = 56/106 (52.83%), Postives = 72/106 (67.92%), Query Frame = 0


Query: 1   MATS--IKLTIIFLVCIAILALPVMARTTTTLDQF-TIKDFASVNCTVFTFEATKCMIEV 60
           MATS   KL ++ LVCIAILA  V AR T       T +DF+   C  F  +ATKC+I+V
Sbjct: 1   MATSAITKLPLVLLVCIAILASSVTARPTIVAAATPTSEDFSLFPCISFVPKATKCVIDV 60

Query: 61  MKNSIPPHPSCCRAILKLNDCNPEVYKDVPSADKKLVKKICALWGV 104
           +KN++ PHPSCC AI +L+DC+ +  KD+PS+D  LVK ICA WGV
Sbjct: 61  LKNAVAPHPSCCEAISQLHDCSSQFLKDIPSSDMILVKSICASWGV 106

[Close]

BLAST of PI0008645 vs. NCBI nr
Match: KAA0050080.1 (hypothetical protein E6C27_scaffold675G00640 [Cucumis melo var. makuwa])

HSP 1 Score: 186.4 bits (472), Expect = 1.2e-43
Identity = 90/103 (87.38%), Postives = 97/103 (94.17%), Query Frame = 0


Query: 1   MATSIKLTIIFLVCIAILALPVMARTTTTLDQFTIKDFASVNCTVFTFEATKCMIEVMKN 60
           MA S+K+ +IFLVCIAIL LPVMART TTLDQF +KDFASVNCTVFTFEATKCMI+VMKN
Sbjct: 1   MAASMKVPLIFLVCIAILTLPVMARTVTTLDQFVMKDFASVNCTVFTFEATKCMIDVMKN 60

Query: 61  SIPPHPSCCRAILKLNDCNPEVYKDVPSADKKLVKKICALWGV 104
           S+PPHPSCCRAILKLNDCNPE YKDVPSADK+LVKKICALWGV
Sbjct: 61  SMPPHPSCCRAILKLNDCNPEAYKDVPSADKELVKKICALWGV 103

[Close]

BLAST of PI0008645 vs. NCBI nr
Match: KGN65195.1 (hypothetical protein Csa_019746 [Cucumis sativus])

HSP 1 Score: 184.1 bits (466), Expect = 6.0e-43
Identity = 89/102 (87.25%), Postives = 94/102 (92.16%), Query Frame = 0


Query: 1   MATSIKLTIIFLVCIAILALPVMARTTTTLDQFTIKDFASVNCTVFTFEATKCMIEVMKN 60
           M  S+KL IIFLVCIAILALPVM RTTTTLDQF+ KD ASVNCTVFTFEATKCMI+VMKN
Sbjct: 1   MVASLKLPIIFLVCIAILALPVMTRTTTTLDQFSTKDVASVNCTVFTFEATKCMIDVMKN 60

Query: 61  SIPPHPSCCRAILKLNDCNPEVYKDVPSADKKLVKKICALWG 103
           S+PPHPSCCRAILKLNDCNPEVYKDVPS DKKL+KKIC LWG
Sbjct: 61  SMPPHPSCCRAILKLNDCNPEVYKDVPSTDKKLIKKICELWG 102

[Close]

BLAST of PI0008645 vs. NCBI nr
Match: KAE8653021.1 (hypothetical protein Csa_004567 [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 6.9e-23
Identity = 58/102 (56.86%), Postives = 74/102 (72.55%), Query Frame = 0


Query: 4   SIKLTIIFLVCIAILALPVMART--TTTLDQFTIKDFASVNCTVFTFEATKCMIEVMKNS 63
           S+KL ++FLVCIAILA+  MA T      D FT ++F+ + CT F  EAT CM++VMKN+
Sbjct: 3   SMKLPLVFLVCIAILAVSGMAHTGALAPADPFTAEEFSLLGCTSFISEATNCMVDVMKNA 62

Query: 64  IPPHPSCCRAILKLNDCNPEVYKDVPSADKKLVKKICALWGV 104
           + PHPSCC+A  KLNDC+ E  K +PSAD  L+K ICALWGV
Sbjct: 63  VAPHPSCCKAFSKLNDCSSEFLKGIPSADMILIKGICALWGV 104

[Close]

BLAST of PI0008645 vs. NCBI nr
Match: TYK10330.1 (hypothetical protein E5676_scaffold367G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 115.9 bits (289), Expect = 2.0e-22
Identity = 57/102 (55.88%), Postives = 74/102 (72.55%), Query Frame = 0


Query: 4   SIKLTIIFLVCIAILALPVMART--TTTLDQFTIKDFASVNCTVFTFEATKCMIEVMKNS 63
           SIKL ++F VC+AILA+  +A T      D FT ++ + + CT F  EATKC+I+VMKN+
Sbjct: 3   SIKLPLVFFVCMAILAVSGIAHTGAAAPSDPFTAEELSLLGCTSFISEATKCVIDVMKNA 62

Query: 64  IPPHPSCCRAILKLNDCNPEVYKDVPSADKKLVKKICALWGV 104
           + PHPSCC+A  KLNDC+PE  K +PSAD  L+K ICALWGV
Sbjct: 63  VAPHPSCCKAFSKLNDCSPEFLKGIPSADMILIKGICALWGV 104

[Close]

BLAST of PI0008645 vs. NCBI nr
Match: KAA0050078.1 (hypothetical protein E6C27_scaffold675G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 114.8 bits (286), Expect = 4.5e-22
Identity = 57/102 (55.88%), Postives = 73/102 (71.57%), Query Frame = 0


Query: 4   SIKLTIIFLVCIAILALPVMART--TTTLDQFTIKDFASVNCTVFTFEATKCMIEVMKNS 63
           SIKL ++F VC+AILA+  +A T      D FT +  + + CT F  EATKC+I+VMKN+
Sbjct: 3   SIKLPLVFFVCMAILAVSGIAHTGAAAPSDPFTAEKLSLLGCTSFISEATKCVIDVMKNA 62

Query: 64  IPPHPSCCRAILKLNDCNPEVYKDVPSADKKLVKKICALWGV 104
           + PHPSCC+A  KLNDC+PE  K +PSAD  L+K ICALWGV
Sbjct: 63  VAPHPSCCKAFSKLNDCSPEFLKGIPSADMILIKGICALWGV 104

The following BLAST results are available for this feature:

BLAST of PI0008645 vs.


Match Name	E-value	Identity	Description

BLAST of PI0008645 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U471	5.9e-44	87.38	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0LTE1	2.9e-43	87.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G263980 PE=4 SV=1	[more]
A0A5D3CG41	9.8e-23	55.88	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U483	2.2e-22	55.88	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CFS6	3.3e-18	52.83	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0008645 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050080.1	1.2e-43	87.38	hypothetical protein E6C27_scaffold675G00640 [Cucumis melo var. makuwa]	[more]
KGN65195.1	6.0e-43	87.25	hypothetical protein Csa_019746 [Cucumis sativus]	[more]
KAE8653021.1	6.9e-23	56.86	hypothetical protein Csa_004567 [Cucumis sativus]	[more]
TYK10330.1	2.0e-22	55.88	hypothetical protein E5676_scaffold367G00010 [Cucumis melo var. makuwa]	[more]
KAA0050078.1	4.5e-22	55.88	hypothetical protein E6C27_scaffold675G00620 [Cucumis melo var. makuwa]	[more]

BLAST of PI0008645 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0008645.1	PI0008645.1	mRNA