PI0008571 (gene) Melon (PI 482460) v1

Overview
NamePI0008571
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Locationchr03: 18652758 .. 18653813 (-)
RNA-Seq ExpressionPI0008571
SyntenyPI0008571
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAATAACAACAGAAATGCCCCTCCGCCGCAAGCTGACCCAAAACCAAACGCCGCCTATATAGCACATGACTTGGATAGGTCGATTAGATCTTATGCGGCGCCCAACCTCTATTACTTCAACCCAGGAATCGCCTACCCTATATTCGGCGAGAACGCCAGGTTTGAAATCAAACCTGTTATGCTTCAAATGATTCAGAATGTCGGACAATTCGACGGACATCCTGGGGAAGATCCACACGAACATATAAGGAGTTTCTACTCCATCTGCGCTTCCTTCCATATGCCAGGCATCTCACCTGAAGAATTAAGATTCGCCCTCTTCCTGTTAACTCTGAGGGATGAGGCGAAGAGATGGGCGAATGCCCTGGAAGATGGCGAGGTGGGAATATGGGATCAATTAATAGAAAAATTTATGAAGAAATTTTTCCCACTTCACGAAAATGCTAGAAGAAGGAAGGAGCTTATGAGCTTCCAGCAGAAGGATAGAGAAAACCTACATAACGCGTGGAGTAGGTTCAAACGGATGGTCAAAGCATGCCCCCACAATGGCATTCCTAAATGCATATTGATGGAGGTTTTCTATTTTGGACTAAACAAGGCTACACAGCAGACTGCTGATGCTGTGTTTGTAGATGGTATGCTGAAAAGTACATACAACCAGATTAAGACGACGCTGGACACGATGGCCAGCAACAATGAAGAGTGGGATGAAGATGATTTCGAAAATCGCCGAGAAGGACGAGCAAAAGAGGATGACATGGATAAGAGCGCCGTGGTTGCATTGCAGGGACAAATGACTGCGATGAACAATTTACTTAAATCAATGGCAATATCGCAAGTCAACGCCGCAGGAAGCTCTGTGCTCGCGGCTAACCAAATTGATGAAATGGAATGCATGGGATGCGACGGTCATCATAACACTGACGCATGCCCACTCAATACTGAAACCGTCGCGTTCGTAAGGAACGACCCCTTCTCCAATACTTACAACCCTGGTTGGAGGAACCATCCCAACTTTGGATGGGGAGGATCGGGTCAACAACAAGGATGA

mRNA sequence

ATGGAAAATAACAACAGAAATGCCCCTCCGCCGCAAGCTGACCCAAAACCAAACGCCGCCTATATAGCACATGACTTGGATAGGTCGATTAGATCTTATGCGGCGCCCAACCTCTATTACTTCAACCCAGGAATCGCCTACCCTATATTCGGCGAGAACGCCAGGTTTGAAATCAAACCTGTTATGCTTCAAATGATTCAGAATGTCGGACAATTCGACGGACATCCTGGGGAAGATCCACACGAACATATAAGGAGTTTCTACTCCATCTGCGCTTCCTTCCATATGCCAGGCATCTCACCTGAAGAATTAAGATTCGCCCTCTTCCTGTTAACTCTGAGGGATGAGGCGAAGAGATGGGCGAATGCCCTGGAAGATGGCGAGGTGGGAATATGGGATCAATTAATAGAAAAATTTATGAAGAAATTTTTCCCACTTCACGAAAATGCTAGAAGAAGGAAGGAGCTTATGAGCTTCCAGCAGAAGGATAGAGAAAACCTACATAACGCGTGGAGTAGGTTCAAACGGATGGTCAAAGCATGCCCCCACAATGGCATTCCTAAATGCATATTGATGGAGGTTTTCTATTTTGGACTAAACAAGGCTACACAGCAGACTGCTGATGCTGTGTTTGTAGATGGTATGCTGAAAAGTACATACAACCAGATTAAGACGACGCTGGACACGATGGCCAGCAACAATGAAGAGTGGGATGAAGATGATTTCGAAAATCGCCGAGAAGGACGAGCAAAAGAGGATGACATGGATAAGAGCGCCGTGGTTGCATTGCAGGGACAAATGACTGCGATGAACAATTTACTTAAATCAATGGCAATATCGCAAGTCAACGCCGCAGGAAGCTCTGTGCTCGCGGCTAACCAAATTGATGAAATGGAATGCATGGGATGCGACGGTCATCATAACACTGACGCATGCCCACTCAATACTGAAACCGTCGCGTTCGTAAGGAACGACCCCTTCTCCAATACTTACAACCCTGGTTGGAGGAACCATCCCAACTTTGGATGGGGAGGATCGGGTCAACAACAAGGATGA

Coding sequence (CDS)

ATGGAAAATAACAACAGAAATGCCCCTCCGCCGCAAGCTGACCCAAAACCAAACGCCGCCTATATAGCACATGACTTGGATAGGTCGATTAGATCTTATGCGGCGCCCAACCTCTATTACTTCAACCCAGGAATCGCCTACCCTATATTCGGCGAGAACGCCAGGTTTGAAATCAAACCTGTTATGCTTCAAATGATTCAGAATGTCGGACAATTCGACGGACATCCTGGGGAAGATCCACACGAACATATAAGGAGTTTCTACTCCATCTGCGCTTCCTTCCATATGCCAGGCATCTCACCTGAAGAATTAAGATTCGCCCTCTTCCTGTTAACTCTGAGGGATGAGGCGAAGAGATGGGCGAATGCCCTGGAAGATGGCGAGGTGGGAATATGGGATCAATTAATAGAAAAATTTATGAAGAAATTTTTCCCACTTCACGAAAATGCTAGAAGAAGGAAGGAGCTTATGAGCTTCCAGCAGAAGGATAGAGAAAACCTACATAACGCGTGGAGTAGGTTCAAACGGATGGTCAAAGCATGCCCCCACAATGGCATTCCTAAATGCATATTGATGGAGGTTTTCTATTTTGGACTAAACAAGGCTACACAGCAGACTGCTGATGCTGTGTTTGTAGATGGTATGCTGAAAAGTACATACAACCAGATTAAGACGACGCTGGACACGATGGCCAGCAACAATGAAGAGTGGGATGAAGATGATTTCGAAAATCGCCGAGAAGGACGAGCAAAAGAGGATGACATGGATAAGAGCGCCGTGGTTGCATTGCAGGGACAAATGACTGCGATGAACAATTTACTTAAATCAATGGCAATATCGCAAGTCAACGCCGCAGGAAGCTCTGTGCTCGCGGCTAACCAAATTGATGAAATGGAATGCATGGGATGCGACGGTCATCATAACACTGACGCATGCCCACTCAATACTGAAACCGTCGCGTTCGTAAGGAACGACCCCTTCTCCAATACTTACAACCCTGGTTGGAGGAACCATCCCAACTTTGGATGGGGAGGATCGGGTCAACAACAAGGATGA

Protein sequence

MENNNRNAPPPQADPKPNAAYIAHDLDRSIRSYAAPNLYYFNPGIAYPIFGENARFEIKPVMLQMIQNVGQFDGHPGEDPHEHIRSFYSICASFHMPGISPEELRFALFLLTLRDEAKRWANALEDGEVGIWDQLIEKFMKKFFPLHENARRRKELMSFQQKDRENLHNAWSRFKRMVKACPHNGIPKCILMEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFENRREGRAKEDDMDKSAVVALQGQMTAMNNLLKSMAISQVNAAGSSVLAANQIDEMECMGCDGHHNTDACPLNTETVAFVRNDPFSNTYNPGWRNHPNFGWGGSGQQQG
Homology
BLAST of PI0008571 vs. ExPASy TrEMBL
Match: A0A6J1EEI2 (uncharacterized protein LOC111433394 OS=Cucurbita moschata OX=3662 GN=LOC111433394 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 9.6e-70
Identity = 141/342 (41.23%), Postives = 200/342 (58.48%), Query Frame = 0

Query: 18  NAAYIAHDLDRSIRSYAAPNLYYFNPGIAYPIFGENARFEIKPVMLQMIQNVGQFDGHPG 77
           NA ++A D +R+IR+YA P +   NP I  P   +   FE+KPVM QM+Q +GQF G P 
Sbjct: 40  NAIHLADDRERAIRAYAHPAVEELNPCIIRPEM-QATTFELKPVMFQMLQTIGQFHGLPS 99

Query: 78  EDPHEHIRSFYSICASFHMPGISPEELRFALFLLTLRDEAKRWANALEDGEVGIWDQLIE 137
           EDPH H++SF  +  SF    +  + +R +LF  +LRD AK W N L  G +  W+ L+E
Sbjct: 100 EDPHLHLKSFLGVSDSFRFQRVDKDVIRLSLFPYSLRDGAKSWLNTLALGTIDSWNSLVE 159

Query: 138 KFMKKFFPLHENARRRKELMSFQQKDRENLHNAWSRFKRMVKACPHNGIPKCILMEVFYF 197
           KF+ K+FP   NAR R E++ FQQ + + L  AW RFK M++ CPH+G+P CI ME FY 
Sbjct: 160 KFLIKYFPPTRNARFRNEIVVFQQFEDDTLSEAWERFKEMLRKCPHHGLPHCIQMETFYN 219

Query: 198 GLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFENRREGRAKEDDMDK 257
           GLN AT+Q  DA     +L  TYN+    L+ +ASNN +W +        GR     ++ 
Sbjct: 220 GLNIATKQVVDASANGAILSKTYNEAYEILERIASNNCQWAD---VRSNPGRKTRGVLEV 279

Query: 258 SAVVALQGQMTAMNNLLKSMAISQ---VNAAGSSVLAANQIDEMECMGCDGHHNTDACPL 317
            A+ ++  Q+ ++ N+L+++A+ Q   + A   +V   NQ     C+ C   H  D CP 
Sbjct: 280 DALSSINAQLASVTNILQNLALGQDSMIKAPVHTVAVINQTAAESCVYCGEEHTFDQCPS 339

Query: 318 NTETVAFV---------RNDPFSNTYNPGWRNHPNFGWGGSG 348
           N  ++ +V         +N+PFSNTYNPGWRNHPNF W G G
Sbjct: 340 NPASIFYVGNQASQGNPKNNPFSNTYNPGWRNHPNFSWKGQG 377

BLAST of PI0008571 vs. ExPASy TrEMBL
Match: A0A6J1H7E4 (uncharacterized protein LOC111461168 OS=Cucurbita moschata OX=3662 GN=LOC111461168 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 1.8e-68
Identity = 140/342 (40.94%), Postives = 195/342 (57.02%), Query Frame = 0

Query: 18  NAAYIAHDLDRSIRSYAAPNLYYFNPGIAYPIFGENARFEIKPVMLQMIQNVGQFDGHPG 77
           NA  +A D +R+IR+YA P +   NP I  P   +   FE+KPVM QM+Q +GQF G P 
Sbjct: 31  NAIQLADDRERAIRAYAHPAVDELNPCIIRPEM-QATTFELKPVMFQMLQTIGQFHGLPS 90

Query: 78  EDPHEHIRSFYSICASFHMPGISPEELRFALFLLTLRDEAKRWANALEDGEVGIWDQLIE 137
           EDPH H++SF  +  SF   G+  + +R +LF  +LRD AK W N L    +  W+ L E
Sbjct: 91  EDPHLHLKSFLGVSDSFRFQGVDKDVIRLSLFPYSLRDGAKSWLNTLAPRTIDSWNSLAE 150

Query: 138 KFMKKFFPLHENARRRKELMSFQQKDRENLHNAWSRFKRMVKACPHNGIPKCILMEVFYF 197
           KF+ K+FP   NAR R E+++FQQ + E L  AW RFK M++ CPH+G+P CI ME FY 
Sbjct: 151 KFLIKYFPPTRNARFRNEIVAFQQFEDETLSEAWERFKEMLRKCPHHGLPHCIQMETFYN 210

Query: 198 GLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFENRREGRAKEDDMDK 257
           GLN AT+Q  DA     ML  TYN+    L+ +ASNN +W +        G+     ++ 
Sbjct: 211 GLNIATKQVVDASANGAMLSKTYNEAYEILERIASNNCQWAD---VRSNPGKKTRGVLEV 270

Query: 258 SAVVALQGQMTAMNNLLKSMAISQ---VNAAGSSVLAANQIDEMECMGCDGHHNTDACPL 317
            A+ ++  Q+ ++ N+L+++A  Q   + A   +     Q     C+ C   H  D CP 
Sbjct: 271 DALSSINAQLASVTNILQNLAFGQGTMIKAPAHTAAVMTQTATESCVYCGEEHTFDQCPR 330

Query: 318 NTETVAFVR---------NDPFSNTYNPGWRNHPNFGWGGSG 348
           N  ++ +VR         N+P SNTYNPGWRNHPNF W G G
Sbjct: 331 NPASILYVRNQASQGNQKNNPSSNTYNPGWRNHPNFSWKGQG 368

BLAST of PI0008571 vs. ExPASy TrEMBL
Match: A0A6J1EQ90 (uncharacterized protein LOC111436411 OS=Cucurbita moschata OX=3662 GN=LOC111436411 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 9.3e-65
Identity = 137/347 (39.48%), Postives = 195/347 (56.20%), Query Frame = 0

Query: 18  NAAYIAHDLDRSIRSYAAPNLYYFNPGIAYPIFGENARFEIKPVMLQMIQNVGQFDGHPG 77
           N  ++A D +R+IR+YA P +   NP I  P   +   FE+KPVM QM+Q +GQF G P 
Sbjct: 62  NPIHLADDRERAIRAYAHPAVEELNPCIIRPEI-QGTTFELKPVMFQMLQTIGQFHGLPL 121

Query: 78  EDPHEHIRSFYSI-------CASFHMPGISPEELRFALFLLTLRDEAKRWANALEDGEVG 137
           EDPH H++SF  +         SF   G+  + +R +LF   LRD AK W N L  G + 
Sbjct: 122 EDPHLHLKSFLGVSDSFRFHSDSFRFQGVDKDMIRLSLFPYLLRDGAKSWLNTLAPGTID 181

Query: 138 IWDQLIEKFMKKFFPLHENARRRKELMSFQQKDRENLHNAWSRFKRMVKACPHNGIPKCI 197
            W+ L E F+ K+FP   NAR + E+++FQQ + E L  A  RFK M++ CPH+G+P CI
Sbjct: 182 SWNSLAENFLIKYFPPTRNARFKNEIVTFQQFEDETLSEACERFKEMLRKCPHHGLPHCI 241

Query: 198 LMEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFENRREGRA 257
            ME FY GLN  T+Q  DA     +L  TYN+    L+ +ASNN +W +        GR 
Sbjct: 242 QMETFYNGLNIVTKQVVDASANGAILSKTYNEAYEILERIASNNCQWAD---VRSNPGRK 301

Query: 258 KEDDMDKSAVVALQGQMTAMNNLLKSMAISQ---VNAAGSSVLAANQIDEMECMGCDGHH 317
               ++  A+ ++  Q+ ++ N+L+++A+ Q   + A   +  A NQ     C+ C   H
Sbjct: 302 TRGVLEVDALSSINAQLASVTNILQNLALGQDSMIKAPVHTAAAINQTAAESCVYCGEEH 361

Query: 318 NTDACPLNTETVAFV---------RNDPFSNTYNPGWRNHPNFGWGG 346
             D CP N  ++ +V         +N+PFSNTYNPGWRNHPNF W G
Sbjct: 362 TFDQCPSNPASIFYVGNQASQGNLKNNPFSNTYNPGWRNHPNFSWKG 404

BLAST of PI0008571 vs. ExPASy TrEMBL
Match: U5CUI2 (Retrotrans_gag domain-containing protein OS=Amborella trichopoda OX=13333 GN=AMTR_s04947p00003620 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 8.7e-63
Identity = 133/313 (42.49%), Postives = 183/313 (58.47%), Query Frame = 0

Query: 18  NAAYIAHDLDRSIRSYAAPNLYYFNPGIAYPIFGENARFEIKPVMLQMIQNVGQFDGHPG 77
           N   +A D  R+IR YAAP     NPGI  P   +  +FE+KPVM QM+Q VGQF G P 
Sbjct: 11  NPIILADDRARAIREYAAPMFNELNPGIVRPEI-QAPQFELKPVMFQMLQTVGQFSGMPT 70

Query: 78  EDPHEHIRSFYSICASFHMPGISPEELRFALFLLTLRDEAKRWANALEDGEVGIWDQLIE 137
           EDPH H+RSF  +  SF + G+S E LR  LF  +LRD A+ W N L    V  W+ L E
Sbjct: 71  EDPHLHLRSFLEVSDSFKIQGVSEEVLRLKLFPFSLRDRARSWLNTLPPDSVTNWNDLAE 130

Query: 138 KFMKKFFPLHENARRRKELMSFQQKDRENLHNAWSRFKRMVKACPHNGIPKCILMEVFYF 197
           KF++K+FP   NA+ R E+MSFQQ + E+  +AW RFK +++ CPH+GIP CI ME FY 
Sbjct: 131 KFLRKYFPPTRNAKFRSEIMSFQQLEDESTSDAWERFKELLRKCPHHGIPHCIQMETFYN 190

Query: 198 GLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFENRREGRAKEDDMDK 257
           GLN A++   DA     +L  +YN+    L+T+ASNN +W        R+       ++ 
Sbjct: 191 GLNAASRMVLDASANGAILSKSYNEAFEILETIASNNYQWSNTRAPTSRKVAGV---LEV 250

Query: 258 SAVVALQGQMTAMNNLLKSMAISQVNAAGSSVLAANQIDEMECMGCDGHHNTDACPLNTE 317
            A+ AL  QM +M N+LK+++I   NA      AA Q D++ C+ C   H  + CP N E
Sbjct: 251 DAITALTAQMASMTNVLKNLSIG--NAKNIQPAAAIQSDDVSCVFCGEGHVFEKCPSNPE 310

Query: 318 TVAFVRNDPFSNT 331
           +V ++ N   + T
Sbjct: 311 SVCYMGNQNLTET 317

BLAST of PI0008571 vs. ExPASy TrEMBL
Match: A0A6J1G7Q6 (uncharacterized protein LOC111451598 OS=Cucurbita moschata OX=3662 GN=LOC111451598 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 1.5e-62
Identity = 132/342 (38.60%), Postives = 193/342 (56.43%), Query Frame = 0

Query: 18  NAAYIAHDLDRSIRSYAAPNLYYFNPGIAYPIFGENARFEIKPVMLQMIQNVGQFDGHPG 77
           NA ++A D +R+IR+YA P +   NP I  P   +   FE+KPVM QM+Q +GQF G   
Sbjct: 10  NAIHVADDRERAIRAYAHPAVEELNPCIIRPEM-QATTFELKPVMFQMLQTIGQFHGLSS 69

Query: 78  EDPHEHIRSFYSICASFHMPGISPEELRFALFLLTLRDEAKRWANALEDGEVGIWDQLIE 137
           +DPH H++SF  +  SF   G+  + +R + F  +LRD AK W N L  G +  W+ L E
Sbjct: 70  KDPHLHLKSFLGVSDSFRFQGVDKDVIRLSFFSYSLRDGAKSWLNILALGIIDSWNSLAE 129

Query: 138 KFMKKFFPLHENARRRKELMSFQQKDRENLHNAWSRFKRMVKACPHNGIPKCILMEVFYF 197
           KF+ K+FP   +AR R E+++FQ+ + E L  AW RFK  ++ CPH+G+P CI +E FY 
Sbjct: 130 KFLFKYFPPTRSARFRNEIVAFQKFENETLSEAWERFKETLRKCPHHGLPHCIQIETFYN 189

Query: 198 GLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFENRREGRAKEDDMDK 257
           GLN AT+Q  DA     +L  TYN+    L+ +ASNN +W +        G+   + ++ 
Sbjct: 190 GLNTATKQVVDASANGDILSKTYNEAYEILERIASNNCQWVD---VRSNPGKKTREVLEV 249

Query: 258 SAVVALQGQMTAMNNLLKSMAISQ---VNAAGSSVLAANQIDEMECMGCDGHHNTDACPL 317
            A+ ++  Q+ +M N+L+++A  Q   + A   +     Q     C+ C   H  D CP 
Sbjct: 250 DALSSINAQLASMTNILQNLAFGQGSMIKAPAHTATVMIQTATESCVYCGEKHTFDQCPS 309

Query: 318 NTETVAFVRN---------DPFSNTYNPGWRNHPNFGWGGSG 348
           N  ++ +V N         +P SNTYNPGWRNHPNF   G G
Sbjct: 310 NPASIFYVGNQASQGNPKTNPSSNTYNPGWRNHPNFLCKGQG 347

BLAST of PI0008571 vs. NCBI nr
Match: XP_038887458.1 (uncharacterized protein LOC120077591 [Benincasa hispida])

HSP 1 Score: 306.2 bits (783), Expect = 3.6e-79
Identity = 160/350 (45.71%), Postives = 227/350 (64.86%), Query Frame = 0

Query: 2   ENNNRNAPPPQAD---PKPNAAYIAHDLDRSIRSYAAPNLYYFNPGIAYPIFGENARFEI 61
           +NNN  AP        P  +  ++A D +  IR+YAAPNLY F+PGI+ PI  ENARFEI
Sbjct: 37  DNNNNEAPEGNQGVNRPVQDPVFLAADHNIPIRNYAAPNLYDFSPGISRPIVEENARFEI 96

Query: 62  KPVMLQMIQNVGQFDGHPGEDPHEHIRSFYSICASFHMPGISPEELRFALFLLTLRDEAK 121
           KPVM+QMIQN+ QF+    E+PH H+  F  +C++F +PGI+P  +R  LF  TLRD+AK
Sbjct: 97  KPVMVQMIQNMRQFESLQCENPHAHLTIFVEMCSTFSIPGITPVGIRLYLFPYTLRDKAK 156

Query: 122 RWANALEDGEVGIWDQLIEKFMKKFFPLHENARRRKELMSFQQKDRENLHNAWSRFKRMV 181
           RWA++LE  E+   DQL+E FMKKFFP   N RRRK +++F++ D E L  AW RF+R+V
Sbjct: 157 RWAHSLEANEITSSDQLVEWFMKKFFPPAINTRRRKNVLNFEKMDNETLSTAWVRFRRLV 216

Query: 182 KACPHNGIPKCILMEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWD 241
           K CPH GI  C+LME+FY GLN++TQ  ADA  V+  +  TY + K  LD ++ N ++W 
Sbjct: 217 KNCPHIGILDCVLMEMFYNGLNRSTQAVADASAVERFMDKTYTKAKVILDRISWNMDDWV 276

Query: 242 EDDFENRREGRAKEDD--MDKSAVVALQGQMTAMNNLLKSMAISQ-VNAAGSS-VLAANQ 301
           +D +  R   R + D+  +  + +  L  QM  + +LL+ MA++Q V++ GS+   A  Q
Sbjct: 277 DDGYRGRGSERRRNDNAIVFANTMTTLATQMAMVTSLLQLMALNQGVHSQGSTQPNAPTQ 336

Query: 302 IDEMECMGCDGHHNTDACPLNTETVAFVRNDPFSNTYNPGWRNHPNFGWG 345
           +  +  +     H  + CP N + V  ++N+P++NTYNP WRNHPNFGWG
Sbjct: 337 VAVISYIQYGKGHAVEMCPSNRQKVCVIQNNPYNNTYNPDWRNHPNFGWG 386

BLAST of PI0008571 vs. NCBI nr
Match: XP_038880527.1 (uncharacterized protein LOC120072192 [Benincasa hispida])

HSP 1 Score: 283.9 bits (725), Expect = 1.9e-72
Identity = 144/337 (42.73%), Postives = 215/337 (63.80%), Query Frame = 0

Query: 22  IAHDLDRSIRSYAAPNLYYFNPGIAYPIFGENARFEIKPVMLQMIQNVGQFDGHPGEDPH 81
           +A++  R +R YA+P LY F+PGI YP+  +  RFE+K VMLQM+Q   QF G  GEDPH
Sbjct: 1   MANNSTRPMREYASPVLYDFSPGIIYPM-PDGTRFEMKSVMLQMLQTARQFGGSHGEDPH 60

Query: 82  EHIRSFYSICASFHMPGISPEELRFALFLLTLRDEAKRWANALEDGEVGIWDQLIEKFMK 141
            H++ F   C  F +P I+PE++R +LF  +LRD+AK+W ++LE  E+  W++L+EKFM+
Sbjct: 61  AHMKRFLETCNFFVIPRITPEKIRLSLFPNSLRDDAKQWVSSLEPEEITTWEKLVEKFMQ 120

Query: 142 KFFPLHENARRRKELMSFQQKDRENLHNAWSRFKRMVKACPHNGIPKCILMEVFYFGLNK 201
           K+FP   NARRR+E+M+F+Q+D E L  A  RF  +VK CP++ +   I ME FY GLN+
Sbjct: 121 KYFPPTTNARRRREIMNFEQEDIETLSVACERFNGLVKNCPNHALLLNIQMETFYGGLNR 180

Query: 202 ATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFENRREGRAKE---DDMDKS 261
           A+Q  ADA   +G++  +Y + K  L  +A +N EW +D ++ R + R +    + +D +
Sbjct: 181 ASQIAADAAAAEGLMDKSYTEAKEILLYIAKHNMEWVDDTYDGRNDRRRRSQNINSVDAN 240

Query: 262 AVVALQGQMTAMNNLLKSMAISQVNAAGSSVLAANQI-----DEMECMGCDGHHNTDACP 321
           A+  L  Q+  M +LL+++ +   NA        NQ+       + C+GC   H+   CP
Sbjct: 241 AIATLSTQVATMTSLLQNIMLG--NAPNQQ--KVNQVKVFGQPTVTCVGCGDFHSYVECP 300

Query: 322 LNTETVAFVRNDPFSNTYNPGWRNHPNFGWGGSGQQQ 351
            N ++V F++N+PFSNTYNPGW NHPNF W G  QQ+
Sbjct: 301 QNPQSVCFIKNNPFSNTYNPGWCNHPNFSWTGGNQQE 332

BLAST of PI0008571 vs. NCBI nr
Match: XP_030497803.1 (uncharacterized protein LOC115713460 [Cannabis sativa])

HSP 1 Score: 274.2 bits (700), Expect = 1.5e-69
Identity = 148/345 (42.90%), Postives = 198/345 (57.39%), Query Frame = 0

Query: 13  ADPKPNAAYIAHDLDRSIRSYAAPNLYYFNPGIAYPIFGENARFEIKPVMLQMIQNVGQF 72
           A  + N   +A D  R+IR YAAP     NPGI  P   +   FE+KPVM QM+Q VGQF
Sbjct: 10  AHNEANPIALADDRTRAIREYAAPMFNELNPGIVRPEI-QAPHFELKPVMFQMLQTVGQF 69

Query: 73  DGHPGEDPHEHIRSFYSICASFHMPGISPEELRFALFLLTLRDEAKRWANALEDGEVGIW 132
            G P EDPH HIRSF  +  SF + G+S E LR  LF  +LRD A+ W N L    V  W
Sbjct: 70  GGSPTEDPHLHIRSFLEVSDSFKLQGVSEEALRLKLFPFSLRDRARAWLNTLPPDSVTNW 129

Query: 133 DQLIEKFMKKFFPLHENARRRKELMSFQQKDRENLHNAWSRFKRMVKACPHNGIPKCILM 192
           + L EKF++K+FP   NA+ R E+MSFQQ + E   +AW RFK +++ CPH+GIP CI +
Sbjct: 130 NDLAEKFLRKYFPPTRNAKFRSEIMSFQQSEDETTSDAWERFKELLRKCPHHGIPHCIQL 189

Query: 193 EVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFENRREGRAKE 252
           E FY GLN A++   DA     +L  +YN+    L+ +ASNN +W  +        R   
Sbjct: 190 ETFYNGLNAASRMVLDASANGAILSKSYNEAFEILERIASNNYQWSTN---RAHTSRKVA 249

Query: 253 DDMDKSAVVALQGQMTAMNNLLKSMAISQVNAAGS-SVLAANQIDEMECMGCDGHHNTDA 312
             ++  A+ AL  QM +M N+LK+M     N  GS    AA Q  +  C+ C   H  + 
Sbjct: 250 GVLEVDALTALTAQMASMTNILKNM-----NMGGSVQPAAAIQRAKNSCVYCGDGHTFEN 309

Query: 313 CPLNTETVAFV-------RNDPFSNTYNPGWRNHPNFGWGGSGQQ 350
           CP N  +V +V        N+P+SN+YNP W++HPNF WGG G+Q
Sbjct: 310 CPSNLASVCYVGNQNFNRNNNPYSNSYNPAWKHHPNFSWGGQGKQ 345

BLAST of PI0008571 vs. NCBI nr
Match: XP_022926214.1 (uncharacterized protein LOC111433394 [Cucurbita moschata])

HSP 1 Score: 273.9 bits (699), Expect = 2.0e-69
Identity = 141/342 (41.23%), Postives = 200/342 (58.48%), Query Frame = 0

Query: 18  NAAYIAHDLDRSIRSYAAPNLYYFNPGIAYPIFGENARFEIKPVMLQMIQNVGQFDGHPG 77
           NA ++A D +R+IR+YA P +   NP I  P   +   FE+KPVM QM+Q +GQF G P 
Sbjct: 40  NAIHLADDRERAIRAYAHPAVEELNPCIIRPEM-QATTFELKPVMFQMLQTIGQFHGLPS 99

Query: 78  EDPHEHIRSFYSICASFHMPGISPEELRFALFLLTLRDEAKRWANALEDGEVGIWDQLIE 137
           EDPH H++SF  +  SF    +  + +R +LF  +LRD AK W N L  G +  W+ L+E
Sbjct: 100 EDPHLHLKSFLGVSDSFRFQRVDKDVIRLSLFPYSLRDGAKSWLNTLALGTIDSWNSLVE 159

Query: 138 KFMKKFFPLHENARRRKELMSFQQKDRENLHNAWSRFKRMVKACPHNGIPKCILMEVFYF 197
           KF+ K+FP   NAR R E++ FQQ + + L  AW RFK M++ CPH+G+P CI ME FY 
Sbjct: 160 KFLIKYFPPTRNARFRNEIVVFQQFEDDTLSEAWERFKEMLRKCPHHGLPHCIQMETFYN 219

Query: 198 GLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFENRREGRAKEDDMDK 257
           GLN AT+Q  DA     +L  TYN+    L+ +ASNN +W +        GR     ++ 
Sbjct: 220 GLNIATKQVVDASANGAILSKTYNEAYEILERIASNNCQWAD---VRSNPGRKTRGVLEV 279

Query: 258 SAVVALQGQMTAMNNLLKSMAISQ---VNAAGSSVLAANQIDEMECMGCDGHHNTDACPL 317
            A+ ++  Q+ ++ N+L+++A+ Q   + A   +V   NQ     C+ C   H  D CP 
Sbjct: 280 DALSSINAQLASVTNILQNLALGQDSMIKAPVHTVAVINQTAAESCVYCGEEHTFDQCPS 339

Query: 318 NTETVAFV---------RNDPFSNTYNPGWRNHPNFGWGGSG 348
           N  ++ +V         +N+PFSNTYNPGWRNHPNF W G G
Sbjct: 340 NPASIFYVGNQASQGNPKNNPFSNTYNPGWRNHPNFSWKGQG 377

BLAST of PI0008571 vs. NCBI nr
Match: XP_017233063.1 (PREDICTED: uncharacterized protein LOC108207110 [Daucus carota subsp. sativus])

HSP 1 Score: 270.0 bits (689), Expect = 2.9e-68
Identity = 141/356 (39.61%), Postives = 203/356 (57.02%), Query Frame = 0

Query: 1   MENNNRNAPPPQADPKPNAAYIAHDLDRSIRSYAAPNLYYFNPGIAYPIFGENARFEIKP 60
           M++N  N   P     P  A+I  D DR+IR YAAP     N GI  P   +  +FE+KP
Sbjct: 36  MDDNVNNGDIPIV---PRGAFIVDDKDRAIRQYAAPRFEELNSGIIRPNI-QATQFELKP 95

Query: 61  VMLQMIQNVGQFDGHPGEDPHEHIRSFYSICASFHMPGISPEELRFALFLLTLRDEAKRW 120
           VM QM+Q +GQF G P EDPH H+R F  I  SF   G+  + LR  LF  ++RD A+ W
Sbjct: 96  VMFQMLQTIGQFSGMPTEDPHLHLRLFMEISDSFKFQGVPEDALRLKLFPYSVRDRARTW 155

Query: 121 ANALEDGEVGIWDQLIEKFMKKFFPLHENARRRKELMSFQQKDRENLHNAWSRFKRMVKA 180
            N+L  G V  W+ L EKF+ K+FP + NA+ R E+ SFQQ+D E+L++AW RFK +++ 
Sbjct: 156 LNSLPAGSVTTWNDLTEKFLSKYFPPNMNAKLRNEINSFQQQDDESLYDAWERFKELLRK 215

Query: 181 CPHNGIPKCILMEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDED 240
           CPH+GI  CI ME FY GLN  T+   DA     +L  +YNQ    L+T+A+ N +W   
Sbjct: 216 CPHHGILHCIQMETFYNGLNAQTKMVVDASANGALLSKSYNQAYEILETIATKNYQWSS- 275

Query: 241 DFENRREGRAKEDDMDKSAVVALQGQMTAMNNLLKSMAISQVNAAGSSVLA-ANQIDEME 300
                + G+      D  ++ +++ Q+ +M ++LK++++    +   S+ +  NQ   + 
Sbjct: 276 --SRAQTGKKVAGIYDVDSITSMKAQLASMEHMLKNLSMGNNQSKEQSLSSQINQTKNVS 335

Query: 301 CMGCDGHHNTDACPLNTETVAFVRND----PFSNTYNPGWRNHPNFGWGGSGQQQG 352
           C+ C   H  D+CP N E+V ++ N     P+SNTYN  WR HPNF W   G   G
Sbjct: 336 CVFCGEAHTYDSCPSNPESVFYMGNQNKAGPYSNTYNQSWRQHPNFSWSNQGANSG 384

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1EEI29.6e-7041.23uncharacterized protein LOC111433394 OS=Cucurbita moschata OX=3662 GN=LOC1114333... [more]
A0A6J1H7E41.8e-6840.94uncharacterized protein LOC111461168 OS=Cucurbita moschata OX=3662 GN=LOC1114611... [more]
A0A6J1EQ909.3e-6539.48uncharacterized protein LOC111436411 OS=Cucurbita moschata OX=3662 GN=LOC1114364... [more]
U5CUI28.7e-6342.49Retrotrans_gag domain-containing protein OS=Amborella trichopoda OX=13333 GN=AMT... [more]
A0A6J1G7Q61.5e-6238.60uncharacterized protein LOC111451598 OS=Cucurbita moschata OX=3662 GN=LOC1114515... [more]
Match NameE-valueIdentityDescription
XP_038887458.13.6e-7945.71uncharacterized protein LOC120077591 [Benincasa hispida][more]
XP_038880527.11.9e-7242.73uncharacterized protein LOC120072192 [Benincasa hispida][more]
XP_030497803.11.5e-6942.90uncharacterized protein LOC115713460 [Cannabis sativa][more]
XP_022926214.12.0e-6941.23uncharacterized protein LOC111433394 [Cucurbita moschata][more]
XP_017233063.12.9e-6839.61PREDICTED: uncharacterized protein LOC108207110 [Daucus carota subsp. sativus][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 108..200
e-value: 5.7E-16
score: 58.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..255
NoneNo IPR availablePANTHERPTHR24559:SF334SUBFAMILY NOT NAMEDcoord: 83..345
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 83..345

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0008571.1PI0008571.1mRNA