PI0008379 (gene) Melon (PI 482460) v1

Overview


Name	PI0008379
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	F-box protein At1g67340
Location	chr12: 3135280 .. 3136984 (-)
RNA-Seq Expression	PI0008379
Synteny	PI0008379

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCCCAGCCGTTGCTGCGTGGCTTAGAGATATAAATTGAACGTACTCGATTCGTTTAGCCGTCACTACATCCAATTCTCAATTCTGGCTTCATTTCATCCTCCATTAACGGACCTCCATTTTTGCTCTCCTCCCATGACAGTTTCTTTTTCAAGGTGAACGTCACAACGAAGACCACTCTATTACATTCCGGAATGTTGTGCAATAAAAGAAGGAGAACTTCCACCAGCGCCGGCGCCGGGATTTCTGATCTCTTCGACGGTTTACCGGACGATCTAGTCGTCGTCGTCCTTGGCAAGCTTAGCGCCACCGCTTCTTCTCCTTCAGACCTCGTCAATGTTATGATAACGTAAGAATTTCTTTCCGTGTGATTCGCCTAATTTATCGAGTTTGTTGTAATTTTCTGTTTAATTTTTTTGTTGGCTAATTGTAGATGTAAAAGGTTCAATCGATTGGCTCTGCATCCGATTGTGTTATCGAAAGCTGGACCTAAAGCATTTGAAATCCAAACCAAGAACTGGTCTGAATCGACTCATCGATTTCTGAAATTGTGCGTTTCTGCTGGTAACGTGGAAGCTTGCTACACTCTCGGAATGGTTCGTGTAATTGATTGATTTTTTCTTTCTTCAATTTCAACCCGATTTTAATGTTAAACCTGTTTTGTTTCGTTTTCTGTTTTCGTTTTTTCAGATCGAGTTTTATTGTTTGAAGAACAGAGGGACTGGAGCTTCTTTAATGGCGAAAGCCGCGATTAAATCCCATCCGTTGGCGCTTTACTCGCTCGCCATCGTACAATTCAACGGAAGCGGTGGCTCCAAAAGCGACAAGAATCTCCGTGCCGGAGTTGCTCTGTGCGGACGAGCCGCTTATCTCGGCCATATCGACGCGCTTCGTGAACTAGGCCACTGCCTTCAAGACGGTTACGGCGTTCCTCAAAACGCATCCGAAGGACGTCGTCTCTTAATCGAAGCCAACGCGCGTGAACTCGCATACATAACAAACTCCTCCCTCCGCCGTCTCCACTGTTCCCGCCACCGTCAGTCCGCGACGGATTCCGGCGGATCGCTTCTCAGTGATTTTGGCTGTAACTTTCCAGCGCCAGAGGCTCATCCGGCGAACCAGTTTTTAAGAGATTGGTTCGCATCGAGGCGTGGATCTATCGCTGAAGGACTGAGACTGTGCTCAAACAGTGGATGTGGAAGGCCGGAGACTAGGCTACATGAATTCCGGCGATGCTCTGTTTGTGGTAATGTAAACTATTGTTCACGAGGATGCCAAGCTCTGGACTGGAAACTGCGGCACAAGACGGAATGTGCGCCGTTCGATCGGTGGCTGATCGAGGACGATGAACTTGAAGGCGACGACGACGGCGGCGTAAATAGAATAGAGCAGTTCGGCGACGGTGAGAATGTGGAATCTGAATAAAACTTGATGATTAAAAGCAAAGCTTAGGTCCCTGTTGCTGAATATCAATTTATTTATTTCTTTAAAGTTCTATTTATTTTATTTTTCATCTTCTCGTCTTTTTTTAACACATAGATGAGGTTTTTGTCTACAACTTTTTTTCTTCTCTTTTAAATTTTATATTTAGTTCTCTTTCCAAAATGTAAATTTAAAATGTGTATATTTATAACTTTTTTAGGTTAAAAAACTCGAAACACGTTTTTAAATGCATAGCTACATACTTACCCATCCCCAATTTTTT

mRNA sequence

CTTCCCAGCCGTTGCTGCGTGGCTTAGAGATATAAATTGAACGTACTCGATTCGTTTAGCCGTCACTACATCCAATTCTCAATTCTGGCTTCATTTCATCCTCCATTAACGGACCTCCATTTTTGCTCTCCTCCCATGACAGTTTCTTTTTCAAGGTGAACGTCACAACGAAGACCACTCTATTACATTCCGGAATGTTGTGCAATAAAAGAAGGAGAACTTCCACCAGCGCCGGCGCCGGGATTTCTGATCTCTTCGACGGTTTACCGGACGATCTAGTCGTCGTCGTCCTTGGCAAGCTTAGCGCCACCGCTTCTTCTCCTTCAGACCTCGTCAATGTTATGATAACATGTAAAAGGTTCAATCGATTGGCTCTGCATCCGATTGTGTTATCGAAAGCTGGACCTAAAGCATTTGAAATCCAAACCAAGAACTGGTCTGAATCGACTCATCGATTTCTGAAATTGTGCGTTTCTGCTGGTAACGTGGAAGCTTGCTACACTCTCGGAATGATCGAGTTTTATTGTTTGAAGAACAGAGGGACTGGAGCTTCTTTAATGGCGAAAGCCGCGATTAAATCCCATCCGTTGGCGCTTTACTCGCTCGCCATCGTACAATTCAACGGAAGCGGTGGCTCCAAAAGCGACAAGAATCTCCGTGCCGGAGTTGCTCTGTGCGGACGAGCCGCTTATCTCGGCCATATCGACGCGCTTCGTGAACTAGGCCACTGCCTTCAAGACGGTTACGGCGTTCCTCAAAACGCATCCGAAGGACGTCGTCTCTTAATCGAAGCCAACGCGCGTGAACTCGCATACATAACAAACTCCTCCCTCCGCCGTCTCCACTGTTCCCGCCACCGTCAGTCCGCGACGGATTCCGGCGGATCGCTTCTCAGTGATTTTGGCTGTAACTTTCCAGCGCCAGAGGCTCATCCGGCGAACCAGTTTTTAAGAGATTGGTTCGCATCGAGGCGTGGATCTATCGCTGAAGGACTGAGACTGTGCTCAAACAGTGGATGTGGAAGGCCGGAGACTAGGCTACATGAATTCCGGCGATGCTCTGTTTGTGGTAATGTAAACTATTGTTCACGAGGATGCCAAGCTCTGGACTGGAAACTGCGGCACAAGACGGAATGTGCGCCGTTCGATCGGTGGCTGATCGAGGACGATGAACTTGAAGGCGACGACGACGGCGGCGTAAATAGAATAGAGCAGTTCGGCGACGGTGAGAATGTGGAATCTGAATAAAACTTGATGATTAAAAGCAAAGCTTAGGTCCCTGTTGCTGAATATCAATTTATTTATTTCTTTAAAGTTCTATTTATTTTATTTTTCATCTTCTCGTCTTTTTTTAACACATAGATGAGGTTTTTGTCTACAACTTTTTTTCTTCTCTTTTAAATTTTATATTTAGTTCTCTTTCCAAAATGTAAATTTAAAATGTGTATATTTATAACTTTTTTAGGTTAAAAAACTCGAAACACGTTTTTAAATGCATAGCTACATACTTACCCATCCCCAATTTTTT

Coding sequence (CDS)

ATGTTGTGCAATAAAAGAAGGAGAACTTCCACCAGCGCCGGCGCCGGGATTTCTGATCTCTTCGACGGTTTACCGGACGATCTAGTCGTCGTCGTCCTTGGCAAGCTTAGCGCCACCGCTTCTTCTCCTTCAGACCTCGTCAATGTTATGATAACATGTAAAAGGTTCAATCGATTGGCTCTGCATCCGATTGTGTTATCGAAAGCTGGACCTAAAGCATTTGAAATCCAAACCAAGAACTGGTCTGAATCGACTCATCGATTTCTGAAATTGTGCGTTTCTGCTGGTAACGTGGAAGCTTGCTACACTCTCGGAATGATCGAGTTTTATTGTTTGAAGAACAGAGGGACTGGAGCTTCTTTAATGGCGAAAGCCGCGATTAAATCCCATCCGTTGGCGCTTTACTCGCTCGCCATCGTACAATTCAACGGAAGCGGTGGCTCCAAAAGCGACAAGAATCTCCGTGCCGGAGTTGCTCTGTGCGGACGAGCCGCTTATCTCGGCCATATCGACGCGCTTCGTGAACTAGGCCACTGCCTTCAAGACGGTTACGGCGTTCCTCAAAACGCATCCGAAGGACGTCGTCTCTTAATCGAAGCCAACGCGCGTGAACTCGCATACATAACAAACTCCTCCCTCCGCCGTCTCCACTGTTCCCGCCACCGTCAGTCCGCGACGGATTCCGGCGGATCGCTTCTCAGTGATTTTGGCTGTAACTTTCCAGCGCCAGAGGCTCATCCGGCGAACCAGTTTTTAAGAGATTGGTTCGCATCGAGGCGTGGATCTATCGCTGAAGGACTGAGACTGTGCTCAAACAGTGGATGTGGAAGGCCGGAGACTAGGCTACATGAATTCCGGCGATGCTCTGTTTGTGGTAATGTAAACTATTGTTCACGAGGATGCCAAGCTCTGGACTGGAAACTGCGGCACAAGACGGAATGTGCGCCGTTCGATCGGTGGCTGATCGAGGACGATGAACTTGAAGGCGACGACGACGGCGGCGTAAATAGAATAGAGCAGTTCGGCGACGGTGAGAATGTGGAATCTGAATAA

Protein sequence

MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLALHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNFPAPEAHPANQFLRDWFASRRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTECAPFDRWLIEDDELEGDDDGGVNRIEQFGDGENVESE

Homology

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BLAST of PI0008379 vs. ExPASy Swiss-Prot
Match: Q9FYF9 (F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 1.1e-123
Identity = 218/339 (64.31%), Postives = 260/339 (76.70%), Query Frame = 0


Query: 18  SDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLALHPIVLSKAGPKAFEIQ 77
           +DL D +PDDLV+ +L KL +T+  P+D +NV++TCKR   LA++PIVLS+  PKA  ++
Sbjct: 41  ADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVK 100

Query: 78  TKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGASLMAKAAIKSHPLALYSL 137
             NWSE +HRFLK CV AG++EACYTLGMI FYCL+NRG GASLMAKAAI SH  ALYSL
Sbjct: 101 AHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSL 160

Query: 138 AIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDGYGVPQNASEGRRLL 197
           A++QFNGSGGSK+DK+LRAGVALC RAA+LGH+DALRELGHCLQDGYGVPQN SEGRR L
Sbjct: 161 AVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFL 220

Query: 198 IEANARELAYITNSSLRR----LHCSRHRQSATDSGGS----LLSDFGCNFPAPEAHPAN 257
           ++ANARELA + +S ++     L  S+       + G     LLSDFGCN PAPE HPAN
Sbjct: 221 VQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETHPAN 280

Query: 258 QFLRDWFASRRGSI-AEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKL 317
           +FL DWFA R G    +GLRLCS++GCGRPETR HEFRRCSVCG VNYCSR CQALDWKL
Sbjct: 281 RFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKL 340

Query: 318 RHKTECAPFDRWLIEDDELEGDDDGGVNRIEQFGDGENV 348
           RHK +CAP  RWL      EGD   G  +I+  G+G+NV
Sbjct: 341 RHKMDCAPVQRWL-----EEGDGGEGNVQIDGNGNGDNV 374

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BLAST of PI0008379 vs. ExPASy Swiss-Prot
Match: Q9FK27 (F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 5.5e-115
Identity = 201/334 (60.18%), Postives = 250/334 (74.85%), Query Frame = 0


Query: 4   NKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLALHP 63
           NK++R   +    +++ F+ L DDL++ +L KL+ +ASSPSD + V+ TCKR NRL LHP
Sbjct: 5   NKKQRLENNHNNTVNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHP 64

Query: 64  IVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGASLMA 123
           +VLSKAG +   +  + WS+S+H+FLKLCV+AGN++A Y+LGMI FYCL+N  +GASLMA
Sbjct: 65  LVLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMA 124

Query: 124 KAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDG 183
           KAAIKSH  ALYSL+++QFNGSGGSK+DKNLRAGVALC R+AYLGH+DALRELGHCLQDG
Sbjct: 125 KAAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDG 184

Query: 184 YGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSG--GSLLSDFGCNFP 243
           YGVP++ SEGRRLLI+ANARELA           CS     +  SG     L+D     P
Sbjct: 185 YGVPRDVSEGRRLLIQANARELA-----------CSLRSYLSLKSGDENETLTDLSV-VP 244

Query: 244 APEAHPANQFLRDWFASRRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGC 303
             E HP N+FL++WF+S R  +AEGLR+CS+ GCGRPETR HEFRRCSVCG VNYCSRGC
Sbjct: 245 VQEIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGC 304

Query: 304 QALDWKLRHKTECAPFDRWLIEDDELEGDDDGGV 336
           QALDW+ +HK EC P D W+    E+ GDD   V
Sbjct: 305 QALDWRAKHKVECTPLDLWVAAAAEI-GDDGEAV 325

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BLAST of PI0008379 vs. ExPASy Swiss-Prot
Match: Q2YDC9 (Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 4.6e-05
Identity = 23/56 (41.07%), Postives = 29/56 (51.79%), Query Frame = 0


Query: 263 IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTECAPFD 319
           +  G  LC   GC  P       +RCS C   +YCS+  Q+LDW+L HK  CA  D
Sbjct: 128 LKSGAHLCRVCGCSGP-------KRCSRCHKAHYCSKEHQSLDWRLGHKQACAQTD 176

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BLAST of PI0008379 vs. ExPASy Swiss-Prot
Match: Q09415 (SET domain-containing protein 14 OS=Caenorhabditis elegans OX=6239 GN=set-14 PE=4 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 3.0e-04
Identity = 20/42 (47.62%), Postives = 26/42 (61.90%), Query Frame = 0


Query: 273 SGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTEC 315
           S C +  T + E ++CS C  + YCS+ CQ  DWKL HK EC
Sbjct: 24  SYCNQCLTSMAELKKCSACRRLAYCSQECQRADWKL-HKVEC 64

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BLAST of PI0008379 vs. ExPASy Swiss-Prot
Match: P46718 (Programmed cell death protein 2 OS=Mus musculus OX=10090 GN=Pdcd2 PE=2 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 5.1e-04
Identity = 22/57 (38.60%), Postives = 27/57 (47.37%), Query Frame = 0


Query: 263 IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTECAPFDR 320
           +  G  LC   GC  P T       CS C   +YCS+  Q LDW+L HK  C   D+
Sbjct: 127 LKSGAHLCRVCGCLAPMT-------CSRCKQAHYCSKEHQTLDWRLGHKQACTQSDK 176

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BLAST of PI0008379 vs. ExPASy TrEMBL
Match: A0A5A7UP50 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004680 PE=4 SV=1)

HSP 1 Score: 709.5 bits (1830), Expect = 6.8e-201
Identity = 346/350 (98.86%), Postives = 348/350 (99.43%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60
           MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240
           QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCS HRQSATDSGGSLLSDFGCNF
Sbjct: 181 QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSSHRQSATDSGGSLLSDFGCNF 240

Query: 241 PAPEAHPANQFLRDWFASRRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPEAHPANQFLRDWFAS RGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEDDELEGDDDGGVNRIEQFGDGENVESE 351
           CQALDWKLRHKTECAPFDRWLIED+ELEGD+DGGVNRIEQFGDGENVESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDEELEGDEDGGVNRIEQFGDGENVESE 350

[Close]

BLAST of PI0008379 vs. ExPASy TrEMBL
Match: A0A1S3AZD5 (F-box protein At1g67340 OS=Cucumis melo OX=3656 GN=LOC103484413 PE=4 SV=1)

HSP 1 Score: 709.5 bits (1830), Expect = 6.8e-201
Identity = 346/350 (98.86%), Postives = 348/350 (99.43%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60
           MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240
           QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCS HRQSATDSGGSLLSDFGCNF
Sbjct: 181 QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSSHRQSATDSGGSLLSDFGCNF 240

Query: 241 PAPEAHPANQFLRDWFASRRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPEAHPANQFLRDWFAS RGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEDDELEGDDDGGVNRIEQFGDGENVESE 351
           CQALDWKLRHKTECAPFDRWLIED+ELEGD+DGGVNRIEQFGDGENVESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDEELEGDEDGGVNRIEQFGDGENVESE 350

[Close]

BLAST of PI0008379 vs. ExPASy TrEMBL
Match: A0A0A0LTV0 (MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G050480 PE=4 SV=1)

HSP 1 Score: 698.4 bits (1801), Expect = 1.6e-197
Identity = 343/351 (97.72%), Postives = 344/351 (98.01%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60
           MLCNKRRRTSTSA  GISDLFDGLPDDLVVVVLGKLSATASSP DLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240
           QDGYGVPQN SEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF
Sbjct: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240

Query: 241 PAPEAHPANQFLRDWFASRRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPEAHPANQFLRDWFAS RGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEDDELEGDDDGG-VNRIEQFGDGENVESE 351
           CQALDWKLRHKTECAPFDRWLIE+DELEGDDDGG VNRIEQF DGENVESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 351

[Close]

BLAST of PI0008379 vs. ExPASy TrEMBL
Match: A0A6J1KQ99 (F-box protein At1g67340-like OS=Cucurbita maxima OX=3661 GN=LOC111495512 PE=4 SV=1)

HSP 1 Score: 652.9 bits (1683), Expect = 7.6e-184
Identity = 320/350 (91.43%), Postives = 326/350 (93.14%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60
           M+CNKRRRTSTS GAGISDLFD LPDDLVVVVLGKLSA ASSPSD+VNVMITCKR NRLA
Sbjct: 1   MVCNKRRRTSTSTGAGISDLFDSLPDDLVVVVLGKLSAAASSPSDIVNVMITCKRLNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHP VL KAGPK FEIQT NWSES+HRFLKLCVSAGNVEACYTLGMIEFYCLKNRG+GAS
Sbjct: 61  LHPFVLKKAGPKVFEIQTINWSESSHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240
           QDGYGV QNASEGRRLLIEANARELA ITNSSL RLHC   R  ATDS  SLLSDFGC F
Sbjct: 181 QDGYGVAQNASEGRRLLIEANARELASITNSSLLRLHCCGDRPPATDSSESLLSDFGCKF 240

Query: 241 PAPEAHPANQFLRDWFASRRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPE HPANQFLRDWFAS RG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPETHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEDDELEGDDDGGVNRIEQFGDGENVESE 351
           CQALDWKLRHKTECAPFDRWLIEDD+LEGDDDG VNRIEQ GDGE+VESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGDVNRIEQLGDGEDVESE 350

[Close]

BLAST of PI0008379 vs. ExPASy TrEMBL
Match: A0A6J1EA77 (F-box protein At5g50450-like OS=Cucurbita moschata OX=3662 GN=LOC111431294 PE=4 SV=1)

HSP 1 Score: 651.7 bits (1680), Expect = 1.7e-183
Identity = 320/350 (91.43%), Postives = 326/350 (93.14%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60
           M+CNKRRRTSTS  AGISDLFDGLPDDLVVVVLGKLSA ASSPSD+VNVMITCKRFNRLA
Sbjct: 1   MVCNKRRRTSTSTDAGISDLFDGLPDDLVVVVLGKLSAAASSPSDIVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHP VL KAGPK FEIQT NWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRG+GAS
Sbjct: 61  LHPFVLKKAGPKVFEIQTINWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240
           QDGYGV QNASEGRRLLIEANARELA ITNSSL RLHC   +  ATDS  SLLSDFGC F
Sbjct: 181 QDGYGVAQNASEGRRLLIEANARELASITNSSLLRLHCCGDQPPATDSSESLLSDFGCKF 240

Query: 241 PAPEAHPANQFLRDWFASRRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPE HPANQFLRDWFAS RG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPETHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEDDELEGDDDGGVNRIEQFGDGENVESE 351
           CQALDWKLRHKTECAPFDRWLIEDD+LEGDDDG VNRIEQ  DGE+VESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGDVNRIEQLEDGEDVESE 350

[Close]

BLAST of PI0008379 vs. NCBI nr
Match: XP_008439699.1 (PREDICTED: F-box protein At1g67340 [Cucumis melo] >KAA0055331.1 F-box protein [Cucumis melo var. makuwa] >TYJ99256.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 709.5 bits (1830), Expect = 1.4e-200
Identity = 346/350 (98.86%), Postives = 348/350 (99.43%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60
           MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240
           QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCS HRQSATDSGGSLLSDFGCNF
Sbjct: 181 QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSSHRQSATDSGGSLLSDFGCNF 240

Query: 241 PAPEAHPANQFLRDWFASRRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPEAHPANQFLRDWFAS RGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEDDELEGDDDGGVNRIEQFGDGENVESE 351
           CQALDWKLRHKTECAPFDRWLIED+ELEGD+DGGVNRIEQFGDGENVESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDEELEGDEDGGVNRIEQFGDGENVESE 350

[Close]

BLAST of PI0008379 vs. NCBI nr
Match: XP_004154118.1 (F-box protein At1g67340 [Cucumis sativus] >KGN64409.1 hypothetical protein Csa_013400 [Cucumis sativus])

HSP 1 Score: 698.4 bits (1801), Expect = 3.2e-197
Identity = 343/351 (97.72%), Postives = 344/351 (98.01%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60
           MLCNKRRRTSTSA  GISDLFDGLPDDLVVVVLGKLSATASSP DLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240
           QDGYGVPQN SEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF
Sbjct: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240

Query: 241 PAPEAHPANQFLRDWFASRRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPEAHPANQFLRDWFAS RGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEDDELEGDDDGG-VNRIEQFGDGENVESE 351
           CQALDWKLRHKTECAPFDRWLIE+DELEGDDDGG VNRIEQF DGENVESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 351

[Close]

BLAST of PI0008379 vs. NCBI nr
Match: XP_038894785.1 (F-box protein At1g67340 [Benincasa hispida])

HSP 1 Score: 674.9 bits (1740), Expect = 3.8e-190
Identity = 331/350 (94.57%), Postives = 336/350 (96.00%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60
           MLCNKRRRTSTSA AGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAAAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHPIVLSKAGPK FEI TKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRG+GAS
Sbjct: 61  LHPIVLSKAGPKLFEILTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240
           QDGYGVPQNASEGRRLLIEANAREL  ITNSSLRRLHCS    SA DSGGSLLSDFGCNF
Sbjct: 181 QDGYGVPQNASEGRRLLIEANARELTSITNSSLRRLHCSGDLPSAMDSGGSLLSDFGCNF 240

Query: 241 PAPEAHPANQFLRDWFASRRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PA EAHPAN+FLRDWFAS RG +AEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAAEAHPANRFLRDWFASGRGFVAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEDDELEGDDDGGVNRIEQFGDGENVESE 351
           CQALDWKLRHKTECAPFDRWLIEDD+LEGDD+G VNRIEQFGDGENVESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEGDDNGDVNRIEQFGDGENVESE 350

[Close]

BLAST of PI0008379 vs. NCBI nr
Match: XP_023519168.1 (F-box protein At5g50450-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 653.7 bits (1685), Expect = 9.2e-184
Identity = 321/350 (91.71%), Postives = 326/350 (93.14%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60
           M+CNKRRRTSTS  AGISDLFDGLPDDLVVVVLGKLSA ASSPSD+VNVM TCKRFNRLA
Sbjct: 1   MVCNKRRRTSTSTDAGISDLFDGLPDDLVVVVLGKLSAAASSPSDIVNVMRTCKRFNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHP VL KAGPK FEIQT NWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRG+GAS
Sbjct: 61  LHPFVLKKAGPKVFEIQTINWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240
           QDGYGV QNASEGRRLLIEANARELA ITNSSL RLHC   R  ATDS  SLLSDFGC F
Sbjct: 181 QDGYGVAQNASEGRRLLIEANARELASITNSSLLRLHCCGDRPPATDSSESLLSDFGCKF 240

Query: 241 PAPEAHPANQFLRDWFASRRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPE HPANQFLRDWFAS RG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPETHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEDDELEGDDDGGVNRIEQFGDGENVESE 351
           CQALDWKLRHKTECAPFDRWLIEDD+LEGDDDG VNRIEQ GDGE+VESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGDVNRIEQLGDGEDVESE 350

[Close]

BLAST of PI0008379 vs. NCBI nr
Match: KAG6584151.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 653.3 bits (1684), Expect = 1.2e-183
Identity = 321/350 (91.71%), Postives = 326/350 (93.14%), Query Frame = 0


Query: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60
           M+CNKRRRTSTS  AGISDLFDGLPDDLVVVVLGKLSA ASSPSD+VNVMITCKRFNRLA
Sbjct: 1   MVCNKRRRTSTSTDAGISDLFDGLPDDLVVVVLGKLSAAASSPSDIVNVMITCKRFNRLA 60

Query: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120
           LHP VL KAGPK FEIQT NWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRG+GAS
Sbjct: 61  LHPFVLKKAGPKVFEIQTINWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240
           QDGYGV QNASEGRRLLIEANARELA ITNSSL RLHC   R  ATDS  SLLSDFGC F
Sbjct: 181 QDGYGVAQNASEGRRLLIEANARELASITNSSLLRLHCCGDRPPATDSSESLLSDFGCKF 240

Query: 241 PAPEAHPANQFLRDWFASRRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPE HPANQFLRDWFAS RG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPETHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEDDELEGDDDGGVNRIEQFGDGENVESE 351
           CQALDWKLRHKTECAPFDRWLIEDD+LEGDDDG VNRIEQ  DGE+VESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGDVNRIEQLEDGEDVESE 350

[Close]

BLAST of PI0008379 vs. TAIR 10
Match: AT1G67340.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 444.5 bits (1142), Expect = 7.9e-125
Identity = 218/339 (64.31%), Postives = 260/339 (76.70%), Query Frame = 0


Query: 18  SDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLALHPIVLSKAGPKAFEIQ 77
           +DL D +PDDLV+ +L KL +T+  P+D +NV++TCKR   LA++PIVLS+  PKA  ++
Sbjct: 41  ADLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSPKAIAVK 100

Query: 78  TKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGASLMAKAAIKSHPLALYSL 137
             NWSE +HRFLK CV AG++EACYTLGMI FYCL+NRG GASLMAKAAI SH  ALYSL
Sbjct: 101 AHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSHAPALYSL 160

Query: 138 AIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDGYGVPQNASEGRRLL 197
           A++QFNGSGGSK+DK+LRAGVALC RAA+LGH+DALRELGHCLQDGYGVPQN SEGRR L
Sbjct: 161 AVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNVSEGRRFL 220

Query: 198 IEANARELAYITNSSLRR----LHCSRHRQSATDSGGS----LLSDFGCNFPAPEAHPAN 257
           ++ANARELA + +S ++     L  S+       + G     LLSDFGCN PAPE HPAN
Sbjct: 221 VQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPAPETHPAN 280

Query: 258 QFLRDWFASRRGSI-AEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKL 317
           +FL DWFA R G    +GLRLCS++GCGRPETR HEFRRCSVCG VNYCSR CQALDWKL
Sbjct: 281 RFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKL 340

Query: 318 RHKTECAPFDRWLIEDDELEGDDDGGVNRIEQFGDGENV 348
           RHK +CAP  RWL      EGD   G  +I+  G+G+NV
Sbjct: 341 RHKMDCAPVQRWL-----EEGDGGEGNVQIDGNGNGDNV 374

[Close]

BLAST of PI0008379 vs. TAIR 10
Match: AT5G50450.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 415.6 bits (1067), Expect = 3.9e-116
Identity = 201/334 (60.18%), Postives = 250/334 (74.85%), Query Frame = 0


Query: 4   NKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLALHP 63
           NK++R   +    +++ F+ L DDL++ +L KL+ +ASSPSD + V+ TCKR NRL LHP
Sbjct: 5   NKKQRLENNHNNTVNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHP 64

Query: 64  IVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGASLMA 123
           +VLSKAG +   +  + WS+S+H+FLKLCV+AGN++A Y+LGMI FYCL+N  +GASLMA
Sbjct: 65  LVLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMA 124

Query: 124 KAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDG 183
           KAAIKSH  ALYSL+++QFNGSGGSK+DKNLRAGVALC R+AYLGH+DALRELGHCLQDG
Sbjct: 125 KAAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDG 184

Query: 184 YGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSG--GSLLSDFGCNFP 243
           YGVP++ SEGRRLLI+ANARELA           CS     +  SG     L+D     P
Sbjct: 185 YGVPRDVSEGRRLLIQANARELA-----------CSLRSYLSLKSGDENETLTDLSV-VP 244

Query: 244 APEAHPANQFLRDWFASRRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGC 303
             E HP N+FL++WF+S R  +AEGLR+CS+ GCGRPETR HEFRRCSVCG VNYCSRGC
Sbjct: 245 VQEIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGC 304

Query: 304 QALDWKLRHKTECAPFDRWLIEDDELEGDDDGGV 336
           QALDW+ +HK EC P D W+    E+ GDD   V
Sbjct: 305 QALDWRAKHKVECTPLDLWVAAAAEI-GDDGEAV 325

[Close]

BLAST of PI0008379 vs. TAIR 10
Match: AT2G24640.1 (ubiquitin-specific protease 19 )

HSP 1 Score: 46.2 bits (108), Expect = 6.2e-05
Identity = 20/45 (44.44%), Postives = 25/45 (55.56%), Query Frame = 0


Query: 273 SGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTECAPF 318
           S CG+  T     ++CS C +V YCS  CQ  DWK  HK +C  F
Sbjct: 65  SVCGKATT-----KKCSRCKSVRYCSAACQTSDWKSGHKLKCKGF 104

[Close]

BLAST of PI0008379 vs. TAIR 10
Match: AT1G17110.1 (ubiquitin-specific protease 15 )

HSP 1 Score: 45.8 bits (107), Expect = 8.1e-05
Identity = 16/32 (50.00%), Postives = 21/32 (65.62%), Query Frame = 0


Query: 287 RCSVCGNVNYCSRGCQALDWKLRHKTECAPFD 319
           RCS C +V YCS  CQ + W++ HK EC P +
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of PI0008379 vs. TAIR 10
Match: AT1G17110.2 (ubiquitin-specific protease 15 )

HSP 1 Score: 45.8 bits (107), Expect = 8.1e-05
Identity = 16/32 (50.00%), Postives = 21/32 (65.62%), Query Frame = 0


Query: 287 RCSVCGNVNYCSRGCQALDWKLRHKTECAPFD 319
           RCS C +V YCS  CQ + W++ HK EC P +
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

The following BLAST results are available for this feature:

BLAST of PI0008379 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYF9	1.1e-123	64.31	F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1	[more]
Q9FK27	5.5e-115	60.18	F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1	[more]
Q2YDC9	4.6e-05	41.07	Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1	[more]
Q09415	3.0e-04	47.62	SET domain-containing protein 14 OS=Caenorhabditis elegans OX=6239 GN=set-14 PE=...	[more]
P46718	5.1e-04	38.60	Programmed cell death protein 2 OS=Mus musculus OX=10090 GN=Pdcd2 PE=2 SV=2	[more]

BLAST of PI0008379 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UP50	6.8e-201	98.86	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004680...	[more]
A0A1S3AZD5	6.8e-201	98.86	F-box protein At1g67340 OS=Cucumis melo OX=3656 GN=LOC103484413 PE=4 SV=1	[more]
A0A0A0LTV0	1.6e-197	97.72	MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G050480 P...	[more]
A0A6J1KQ99	7.6e-184	91.43	F-box protein At1g67340-like OS=Cucurbita maxima OX=3661 GN=LOC111495512 PE=4 SV...	[more]
A0A6J1EA77	1.7e-183	91.43	F-box protein At5g50450-like OS=Cucurbita moschata OX=3662 GN=LOC111431294 PE=4 ...	[more]

BLAST of PI0008379 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439699.1	1.4e-200	98.86	PREDICTED: F-box protein At1g67340 [Cucumis melo] >KAA0055331.1 F-box protein [C...	[more]
XP_004154118.1	3.2e-197	97.72	F-box protein At1g67340 [Cucumis sativus] >KGN64409.1 hypothetical protein Csa_0...	[more]
XP_038894785.1	3.8e-190	94.57	F-box protein At1g67340 [Benincasa hispida]	[more]
XP_023519168.1	9.2e-184	91.71	F-box protein At5g50450-like [Cucurbita pepo subsp. pepo]	[more]
KAG6584151.1	1.2e-183	91.71	F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of PI0008379 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67340.1	7.9e-125	64.31	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT5G50450.1	3.9e-116	60.18	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT2G24640.1	6.2e-05	44.44	ubiquitin-specific protease 19	[more]
AT1G17110.1	8.1e-05	50.00	ubiquitin-specific protease 15	[more]
AT1G17110.2	8.1e-05	50.00	ubiquitin-specific protease 15	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002893	Zinc finger, MYND-type	PFAM	PF01753	zf-MYND	coord: 274..314 e-value: 2.9E-8 score: 33.7
IPR002893	Zinc finger, MYND-type	PROSITE	PS50865	ZF_MYND_2	coord: 272..314 score: 11.205131
None	No IPR available	GENE3D	6.10.140.2220		coord: 263..317 e-value: 2.5E-11 score: 45.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 328..350
None	No IPR available	PANTHER	PTHR46758:SF9	HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN	coord: 1..346
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 86..200
None	No IPR available	SUPERFAMILY	144232	HIT/MYND zinc finger-like	coord: 270..319
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 73..258 e-value: 2.4E-16 score: 62.0
IPR044508	F-box protein At5g50450/At1g67340-like	PANTHER	PTHR46758	MYND DOMAIN-CONTAINING	coord: 1..346
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 18..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0008379.1	PI0008379.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding