PI0008336 (gene) Melon (PI 482460) v1

Overview
NamePI0008336
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr04: 3176636 .. 3177551 (-)
RNA-Seq ExpressionPI0008336
SyntenyPI0008336
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGGATTTTTGTGTAAAGGCGTGATAGACAGTGCGGGACCTGATCAGAAGAAGTGTTTTGGTGTCTTCAAATTATTTTGGTTATAGTTCAAATAACCAATAAAAATTTAGAGTAGAAAGAGCTTAACTTTATGCCTTTGACCGCTCACCCTCTCTCTACCTCTCTTCTATCTCTTCCCTTCTAATCCACCAGAAACCAGAAGCTAAATCCATTTTTATTACTTTCTTCTTCTCCCTTGCCTCTTCTCTCTCTCCCATTTCTCTCAGGGGTTGAGCTATTCGGAGAAGTCTTTCTACAGCACTCTTTTTATTCTGCCAAGAAAAGCAAAGCTGCTCAGCTCCAGTTCTTGAAATTTTCTTCTTCTTCTTCTTCTTCTTTTTTGGGTATACTTTTCGGCTTCTCTCGCTTTGCTTTTTGGTTTTCTTGCCTTTGTTCTTCAAGGGTCTGCATCGTCTTATCTTCTTGTTGTGTTTCTCGAATCTGGGTCGCGACCTGGCTTTGGATCTGTGATGGGGTTTCAACGAAAACTTTTGTTAAGTGAGAAAGATCTGGCCTTTTGGCTCGTACAAGTTCACATTAGTTGTGGATCATGTTTATGGAGTTCGTTTAGTAATTTTGATTCAGTTTAGACTAGTTGAAATTGTACCCAGAAACTGCATTTGCAGTGGCTATGTTGCTCGACTGATATTTCGCTTTGATGCTCATTTTATCTGTTAATTTTTGCCTCAAAATTTTCATTGCTTTCTTTGATTTTTACCTCCGTAACGCATCTGTATCTTTTCCGTTTGTGTGGGTCATTTAATTCTTTTTCATGTTTTTTTCACAGATCATTTGTTGCTTTCGGTGGACACGAAGGAGAAACTAGGATGGGCTGCTAATGGGAGGCAGAATGGTCCGGAGAACAGTTGCTGA

mRNA sequence

ATGAAGGGATTTTTGTGTAAAGGCGTGATAGACAGTGCGGGACCTGATCAGAAGAAGTGTTTTGGGGTTGAGCTATTCGGAGAAGTCTTTCTACAGCACTCTTTTTATTCTGCCAAGAAAAGCAAAGCTGCTCAGCTCCAGTTCTTGAAATTTTCTTCTTCTTCTTCTTCTTCTTTTTTGGATCATTTGTTGCTTTCGGTGGACACGAAGGAGAAACTAGGATGGGCTGCTAATGGGAGGCAGAATGGTCCGGAGAACAGTTGCTGA

Coding sequence (CDS)

ATGAAGGGATTTTTGTGTAAAGGCGTGATAGACAGTGCGGGACCTGATCAGAAGAAGTGTTTTGGGGTTGAGCTATTCGGAGAAGTCTTTCTACAGCACTCTTTTTATTCTGCCAAGAAAAGCAAAGCTGCTCAGCTCCAGTTCTTGAAATTTTCTTCTTCTTCTTCTTCTTCTTTTTTGGATCATTTGTTGCTTTCGGTGGACACGAAGGAGAAACTAGGATGGGCTGCTAATGGGAGGCAGAATGGTCCGGAGAACAGTTGCTGA

Protein sequence

MKGFLCKGVIDSAGPDQKKCFGVELFGEVFLQHSFYSAKKSKAAQLQFLKFSSSSSSSFLDHLLLSVDTKEKLGWAANGRQNGPENSC
Homology
[Close]
BLAST of PI0008336 vs. ExPASy TrEMBL
Match: A0A0A0KL18 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G510940 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.2e-34
Identity = 81/88 (92.05%), Postives = 81/88 (92.05%), Query Frame = 0 

Query: 1  MKGFLCKGVIDSAGPDQKKCFGVELFGEVFLQHSFYSAKKSKAAQLQFLKFSSSSSSSFL 60
          MKG LCKGVIDSAGP QK CFGVEL GEVF QHSFYSAKKSKAAQLQFLKF SSSSSSFL
Sbjct: 1  MKGLLCKGVIDSAGP-QKNCFGVELLGEVFRQHSFYSAKKSKAAQLQFLKF-SSSSSSFL 60

Query: 61 DHLLLSVDTKEKLGWAANGRQNGPENSC 89
          DHLLLSVDTKEKLGWAAN RQNGPENSC
Sbjct: 61 DHLLLSVDTKEKLGWAANVRQNGPENSC 86

[Close]
BLAST of PI0008336 vs. NCBI nr
Match: KGN49027.1 (hypothetical protein Csa_004046 [Cucumis sativus])

HSP 1 Score: 155.2 bits (391), Expect = 2.6e-34
Identity = 81/88 (92.05%), Postives = 81/88 (92.05%), Query Frame = 0 

Query: 1  MKGFLCKGVIDSAGPDQKKCFGVELFGEVFLQHSFYSAKKSKAAQLQFLKFSSSSSSSFL 60
          MKG LCKGVIDSAGP QK CFGVEL GEVF QHSFYSAKKSKAAQLQFLKF SSSSSSFL
Sbjct: 1  MKGLLCKGVIDSAGP-QKNCFGVELLGEVFRQHSFYSAKKSKAAQLQFLKF-SSSSSSFL 60

Query: 61 DHLLLSVDTKEKLGWAANGRQNGPENSC 89
          DHLLLSVDTKEKLGWAAN RQNGPENSC
Sbjct: 61 DHLLLSVDTKEKLGWAANVRQNGPENSC 86

The following BLAST results are available for this feature:
BLAST of PI0008336 vs.
Match NameE-valueIdentityDescription
BLAST of PI0008336 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KL181.2e-3492.05Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G510940 PE=4 SV=1[more]
BLAST of PI0008336 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49027.12.6e-3492.05hypothetical protein Csa_004046 [Cucumis sativus][more]
BLAST of PI0008336 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0008336.1PI0008336.1mRNA