PI0008184 (gene) Melon (PI 482460) v1

Overview


Name	PI0008184
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	30S ribosomal protein S9
Location	chr04: 28336176 .. 28338414 (-)
RNA-Seq Expression	PI0008184
Synteny	PI0008184

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGATATAGTAAATTCACACACATTATCCCCTTCCAGTTTCATCATCTCATCTCAGCTGTTCTTGGATACACTGCAGTTTCAATTTCTTGAAGGGACTACCTTCATTCTGGATAGACAATGGCTACTTCTATATCCTCACTTGCATTTTCTCTATCTTCTCTCTCCTTTTCTTCCCAAGTATCACACAAGCCAAATGCCCTCTCCTTTCCCCGCTCAAAATCTCTTCTAATTTCCCCTACCTCCTCTACTTCCCCACTTGTCGTATCTGCCTCCGCCGCTTCCGCTGTCGAGACGGCCGACCTTAAGACCTTCGTCAAATCGAGCCTCCCTGGTGGTTTCGCCGCTCAAACGCTTATTGGTACTGGTCGCCGGAAATCTGCCGTAGCTCGTGTTGTCCTTCGAGAAGGCACTGGCAAAGTTATTATCAATTACCGCGACGCTAAGGTCCTCTATCTTTTTTTTTTTGTTCGCCTACTTTCCTTTAGTTTAATCCATTTCCACTTCCTAATTTTGGTACTGGATGTTCTTTGGACGATTTAGGGTTTTTGTTTCTTTTGCTGAATTCGACTAGGTTCGTTTGATGGCAATGCAAATGTCTTTTTTTTATTAAACCAACAATTGTTATTATATGTTCCCGATTACCCTCTTCTATATGCCATGGAACTGATTCTTTTCTTTAATCTTTCCCCACCGACTCTGTTATCGATCTGCGACATTATGTTGAATTGGAAATGAACTTGAGAATAACATTCTTTACATTCTAGAATTAAATTCTAAGGCTATTGTTTCTTCATCTAATACGGTGAATTTATATTAGATTCCATCGCTTGGTGCTAAATTCGGATAAAGGACTGATGCGACTGTATCTATATATCTTGTGTTTCTTGTAAGTTTGAGCTTCCAGTGAAATGGTTCATAATGCCAAACACATATTTATTTCGGGGATTTAGTAGTTCCCTTTCTTTCTAATGGGTGTGGGAGGGAAAATGTGCCATTGTTCTTCCTCTTACATCAGATATGGAAATCTTTTACATCTGTTAACGTTAGATCACACTGCAAATCCTTCATTTGCCATTTGCCAGTGTTCATTTGTCATAGTGCTTCCGGAGATGGCAACCATAATCTCACGACCTTACTTAGACAGGATCAGTTCTATTGGTTGTACCACTCTCTCCTTTAAGTTCTAAAGAGATGGAAACCATAGTATCAAGTCTAGTACGGGTGTAACCAATGCCTACATTTGTTCCTTATATGTTAAAGATGTTTGTTTCACCTATAAATACGTGAATTTAGTGTACAGTTTTTCTTTCTTTCTTCCAACGAGAGGGAGTGGCAGCTTTTGTTCAAGTGTATATGTCTTTCGAGCTTTGCTCATAGTGAAGAAACGTATTTCGTTTCTTGTTAGGATGCCACTTTCCGTTACATGTTTTTAAGGTTTTTCTTTTGTTGTGTACAATAAGTGGAGTTATGAAGATTTATTACCGTTGAGATCAGGTTTTTCTAGTATTGATGCTTGAATAATCTCTTCTAAACTCTATTTGGAGTAAGTAGAAGATTCACCCAATTTGTACTGAGCTTCTAGCTCTTTTATTTATTTAAGACAAGTTGTTATAACAACCAATTGATTTTGTATGAAGTTTTTAAGCTGTTACTCACCTCTACATTGGAATACACTAATTATTGCAGGAATACCTTCAAGGAAATCCATTATGGCTTCAATATGTAAGAGTTCCATTAGTAACATTAGGATATGAAAGTAGCTACGATGTATTCGTGAAAGCCGAAGGAGGTGGGCTGTCTGGCCAGGCTCAGGCAATTTCCCTTGGCATTGCTCGTGCTCTGCTAAAGGTGAGTGATGATCACAGATCACCTCTAAAGAAAGAGGGGCTTTTGACAAGAGACGCTAGAGTTGTGGAGAGAAAGAAGGCTGGTCTCAAGAAAGCTCGTAAAGCCCCACAATTCTCCAAGCGTTGAGGTTCAATTTTCCTCTTCAATTGTTTTACGTTCCCCCGTTTCCTACTTTATTTGTACAACCCAGATGTTTTCTTCTACTTTTCCTTTACTCTCTAATGTAGTGTTATTCCAACATTTCTCCATATGAAAAAAAAAAAGTCAACCCAAAATTGATCATTGTAATTCTTTTAAAATAAACATTTTCTCGTTGGAAAAACCCTCGTGAATAAGCAGAAAAGTAATAGAGAAATTGGAATACATGAATTAAAGTGAGTTTTTTAATCT

mRNA sequence

AGGATATAGTAAATTCACACACATTATCCCCTTCCAGTTTCATCATCTCATCTCAGCTGTTCTTGGATACACTGCAGTTTCAATTTCTTGAAGGGACTACCTTCATTCTGGATAGACAATGGCTACTTCTATATCCTCACTTGCATTTTCTCTATCTTCTCTCTCCTTTTCTTCCCAAGTATCACACAAGCCAAATGCCCTCTCCTTTCCCCGCTCAAAATCTCTTCTAATTTCCCCTACCTCCTCTACTTCCCCACTTGTCGTATCTGCCTCCGCCGCTTCCGCTGTCGAGACGGCCGACCTTAAGACCTTCGTCAAATCGAGCCTCCCTGGTGGTTTCGCCGCTCAAACGCTTATTGGTACTGGTCGCCGGAAATCTGCCGTAGCTCGTGTTGTCCTTCGAGAAGGCACTGGCAAAGTTATTATCAATTACCGCGACGCTAAGGAATACCTTCAAGGAAATCCATTATGGCTTCAATATGTAAGAGTTCCATTAGTAACATTAGGATATGAAAGTAGCTACGATGTATTCGTGAAAGCCGAAGGAGGTGGGCTGTCTGGCCAGGCTCAGGCAATTTCCCTTGGCATTGCTCGTGCTCTGCTAAAGGTGAGTGATGATCACAGATCACCTCTAAAGAAAGAGGGGCTTTTGACAAGAGACGCTAGAGTTGTGGAGAGAAAGAAGGCTGGTCTCAAGAAAGCTCGTAAAGCCCCACAATTCTCCAAGCGTTGAGGTTCAATTTTCCTCTTCAATTGTTTTACGTTCCCCCGTTTCCTACTTTATTTGTACAACCCAGATGTTTTCTTCTACTTTTCCTTTACTCTCTAATGTAGTGTTATTCCAACATTTCTCCATATGAAAAAAAAAAAGTCAACCCAAAATTGATCATTGTAATTCTTTTAAAATAAACATTTTCTCGTTGGAAAAACCCTCGTGAATAAGCAGAAAAGTAATAGAGAAATTGGAATACATGAATTAAAGTGAGTTTTTTAATCT

Coding sequence (CDS)

ATGGCTACTTCTATATCCTCACTTGCATTTTCTCTATCTTCTCTCTCCTTTTCTTCCCAAGTATCACACAAGCCAAATGCCCTCTCCTTTCCCCGCTCAAAATCTCTTCTAATTTCCCCTACCTCCTCTACTTCCCCACTTGTCGTATCTGCCTCCGCCGCTTCCGCTGTCGAGACGGCCGACCTTAAGACCTTCGTCAAATCGAGCCTCCCTGGTGGTTTCGCCGCTCAAACGCTTATTGGTACTGGTCGCCGGAAATCTGCCGTAGCTCGTGTTGTCCTTCGAGAAGGCACTGGCAAAGTTATTATCAATTACCGCGACGCTAAGGAATACCTTCAAGGAAATCCATTATGGCTTCAATATGTAAGAGTTCCATTAGTAACATTAGGATATGAAAGTAGCTACGATGTATTCGTGAAAGCCGAAGGAGGTGGGCTGTCTGGCCAGGCTCAGGCAATTTCCCTTGGCATTGCTCGTGCTCTGCTAAAGGTGAGTGATGATCACAGATCACCTCTAAAGAAAGAGGGGCTTTTGACAAGAGACGCTAGAGTTGTGGAGAGAAAGAAGGCTGGTCTCAAGAAAGCTCGTAAAGCCCCACAATTCTCCAAGCGTTGA

Protein sequence

MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISPTSSTSPLVVSASAASAVETADLKTFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQYVRVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTRDARVVERKKAGLKKARKAPQFSKR

Homology

[Close]

BLAST of PI0008184 vs. ExPASy Swiss-Prot
Match: Q9XJ27 (30S ribosomal protein S9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS9 PE=2 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.5e-75
Identity = 156/206 (75.73%), Postives = 175/206 (84.95%), Query Frame = 0


Query: 4   SISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISPTSSTSPLVVSASAASAV-----E 63
           SI++LA SLSSLSFSSQVS +PN +SFPR+ S+   P  S     +S +A  +      E
Sbjct: 3   SITNLASSLSSLSFSSQVSQRPNTISFPRANSVFALPAKSARRASLSITATVSAPPEEEE 62

Query: 64  TADLKTFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLW 123
             +LK +VKS LPGGFAAQ +IGTGRRK A+ARVVL+EGTGKVIINYRDAKEYLQGNPLW
Sbjct: 63  IVELKKYVKSRLPGGFAAQKIIGTGRRKCAIARVVLQEGTGKVIINYRDAKEYLQGNPLW 122

Query: 124 LQYVRVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLL 183
           LQYV+VPLVTLGYE+SYD+FVKA GGGLSGQAQAI+LG+ARALLKVS DHRSPLKKEGLL
Sbjct: 123 LQYVKVPLVTLGYENSYDIFVKAHGGGLSGQAQAITLGVARALLKVSADHRSPLKKEGLL 182

Query: 184 TRDARVVERKKAGLKKARKAPQFSKR 205
           TRDARVVERKKAGLKKARKAPQFSKR
Sbjct: 183 TRDARVVERKKAGLKKARKAPQFSKR 208

[Close]

BLAST of PI0008184 vs. ExPASy Swiss-Prot
Match: P82278 (30S ribosomal protein S9, chloroplastic OS=Spinacia oleracea OX=3562 GN=PRPS9 PE=1 SV=2)

HSP 1 Score: 273.9 bits (699), Expect = 1.5e-72
Identity = 150/208 (72.12%), Postives = 174/208 (83.65%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISPTSSTSPLVVSASAASA---- 60
           MA SISSL  S +SLSF+S ++ KP  L   R+K   +S  +   PLV++A++A+A    
Sbjct: 1   MAVSISSLTSSFASLSFTSNLTPKPQTLPMARTKPFSLSNPAVVKPLVITATSATAPVEV 60

Query: 61  VETADLKTFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNP 120
            ETADL+ FVKS LPGGFAAQT+IGTGRRK A+ARVVL+EGTGK IINYRDAKEYLQGNP
Sbjct: 61  AETADLEKFVKSRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNP 120

Query: 121 LWLQYVRVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEG 180
           LWLQYV+ PL TLGYE++YDVFVKA GGGLSGQAQAISLG+ARALLKVS  HR+PLK+EG
Sbjct: 121 LWLQYVKTPLATLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEG 180

Query: 181 LLTRDARVVERKKAGLKKARKAPQFSKR 205
           LLTRD+R+VERKK GLKKARKAPQFSKR
Sbjct: 181 LLTRDSRIVERKKPGLKKARKAPQFSKR 208

[Close]

BLAST of PI0008184 vs. ExPASy Swiss-Prot
Match: Q9MUV1 (30S ribosomal protein S9, chloroplastic OS=Mesostigma viride OX=41882 GN=rps9 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.1e-35
Identity = 83/125 (66.40%), Postives = 94/125 (75.20%), Query Frame = 0


Query: 80  IGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQYVRVPLVTLGYESSYDVFV 139
           +GTGRRKSAVARV L  G G+VIIN      YLQ N  +L  VR PL TLG E +YD+ V
Sbjct: 13  LGTGRRKSAVARVRLVPGNGEVIINGLPGTNYLQFNGSYLSAVRSPLETLGLEDNYDIIV 72

Query: 140 KAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTRDARVVERKKAGLKKARKAP 199
           KA GGGL+GQA+AI LG+ARAL  +   +R PLKKEG LTRD+RV ERKK GLKKARKAP
Sbjct: 73  KAVGGGLTGQAEAIRLGVARALCTIDTSNRHPLKKEGFLTRDSRVKERKKYGLKKARKAP 132

Query: 200 QFSKR 205
           QFSKR
Sbjct: 133 QFSKR 137

[Close]

BLAST of PI0008184 vs. ExPASy Swiss-Prot
Match: Q8DMK7 (30S ribosomal protein S9 OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=rpsI PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.5e-35
Identity = 78/125 (62.40%), Postives = 98/125 (78.40%), Query Frame = 0


Query: 80  IGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQYVRVPLVTLGYESSYDVFV 139
           +GTGRRKSAVARV L  G+G++ IN R+  +YLQ NP++L  V+ PL TLG E+SYD++V
Sbjct: 13  LGTGRRKSAVARVRLIPGSGQLWINGRNGADYLQNNPIYLNLVKAPLETLGLENSYDIYV 72

Query: 140 KAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTRDARVVERKKAGLKKARKAP 199
            A GGGL+GQA AI LGIARAL ++  ++R PLK EG LTRD R  ER+K GL+KARKAP
Sbjct: 73  NATGGGLTGQADAIRLGIARALCQLDIENRKPLKTEGYLTRDPRAKERRKYGLRKARKAP 132

Query: 200 QFSKR 205
           Q+SKR
Sbjct: 133 QYSKR 137

[Close]

BLAST of PI0008184 vs. ExPASy Swiss-Prot
Match: B2ITM7 (30S ribosomal protein S9 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=rpsI PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.7e-34
Identity = 75/124 (60.48%), Postives = 93/124 (75.00%), Query Frame = 0


Query: 81  GTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQYVRVPLVTLGYESSYDVFVK 140
           GTGRRK+AVARV L  GTG++ +N +D   Y Q NP +L  ++ PL TLG E+ YD+ VK
Sbjct: 15  GTGRRKNAVARVRLVPGTGQLTVNGKDGNLYFQFNPNYLGVIKAPLETLGLENEYDILVK 74

Query: 141 AEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTRDARVVERKKAGLKKARKAPQ 200
           AEGGGL+GQA ++ LG+ARAL ++  D+R PLK EG LTRD R  ERKK GL KARKAPQ
Sbjct: 75  AEGGGLTGQADSVRLGVARALCQLDPDNRPPLKTEGYLTRDPRAKERKKYGLHKARKAPQ 134

Query: 201 FSKR 205
           +SKR
Sbjct: 135 YSKR 138

[Close]

BLAST of PI0008184 vs. ExPASy TrEMBL
Match: A0A5A7UBW5 (30S ribosomal protein S9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold234G00010 PE=3 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.0e-95
Identity = 197/204 (96.57%), Postives = 203/204 (99.51%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISPTSSTSPLVVSASAASAVETA 60
           MATSISSLAFSLSSLSFSSQVSHKP ALSFPRSKSLLISP+SSTSPL+VSASAA+AVETA
Sbjct: 1   MATSISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAVETA 60

Query: 61  DLKTFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           DLK+FVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  DLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVRVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YV+VPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR
Sbjct: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180

Query: 181 DARVVERKKAGLKKARKAPQFSKR 205
           D+RVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

[Close]

BLAST of PI0008184 vs. ExPASy TrEMBL
Match: A0A1S3CRR0 (30S ribosomal protein S9, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503984 PE=3 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.0e-95
Identity = 197/204 (96.57%), Postives = 203/204 (99.51%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISPTSSTSPLVVSASAASAVETA 60
           MATSISSLAFSLSSLSFSSQVSHKP ALSFPRSKSLLISP+SSTSPL+VSASAA+AVETA
Sbjct: 1   MATSISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAVETA 60

Query: 61  DLKTFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           DLK+FVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  DLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVRVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YV+VPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR
Sbjct: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180

Query: 181 DARVVERKKAGLKKARKAPQFSKR 205
           D+RVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

[Close]

BLAST of PI0008184 vs. ExPASy TrEMBL
Match: A0A0A0LDS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G854240 PE=3 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.2e-94
Identity = 194/204 (95.10%), Postives = 201/204 (98.53%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISPTSSTSPLVVSASAASAVETA 60
           MATSISSLAFSLSSLSFSSQVSHKP+ALSFPRSKSLLISP+SSTS LVV+ASAA+ VETA
Sbjct: 1   MATSISSLAFSLSSLSFSSQVSHKPSALSFPRSKSLLISPSSSTSSLVVTASAAAVVETA 60

Query: 61  DLKTFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           DLKTFVKSSLPGGFAAQTL GTGRRKSAVARVVLREGTGKVIINYR+AKEYLQGNPLWLQ
Sbjct: 61  DLKTFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYREAKEYLQGNPLWLQ 120

Query: 121 YVRVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YV++PLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR
Sbjct: 121 YVKIPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180

Query: 181 DARVVERKKAGLKKARKAPQFSKR 205
           DARVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DARVVERKKAGLKKARKAPQFSKR 204

[Close]

BLAST of PI0008184 vs. ExPASy TrEMBL
Match: A0A6J1CNY0 (30S ribosomal protein S9, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111013001 PE=3 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 9.1e-89
Identity = 182/204 (89.22%), Postives = 197/204 (96.57%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISPTSSTSPLVVSASAASAVETA 60
           MA+SISSLAFSLSSLSFSSQ+S KPN LSFPRSKSL+IS   ++SPLVVSASAA+ VETA
Sbjct: 1   MASSISSLAFSLSSLSFSSQISQKPNGLSFPRSKSLVISHPCNSSPLVVSASAATGVETA 60

Query: 61  DLKTFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           +L++FVKS LPGGFAAQTLIGTGRRKSA+ARVV++EGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  ELRSFVKSRLPGGFAAQTLIGTGRRKSAIARVVIQEGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVRVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YV+VPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHR+PLKKEGLLTR
Sbjct: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRAPLKKEGLLTR 180

Query: 181 DARVVERKKAGLKKARKAPQFSKR 205
           D+RVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

[Close]

BLAST of PI0008184 vs. ExPASy TrEMBL
Match: A0A6J1FS60 (30S ribosomal protein S9, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111446382 PE=3 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.2e-88
Identity = 185/204 (90.69%), Postives = 194/204 (95.10%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISPTSSTSPLVVSASAASAVETA 60
           MATS+SSLAFSLSSLSFSSQVS  PN+LSFPRSKSL+IS   S SPLVVSASA SAVETA
Sbjct: 1   MATSVSSLAFSLSSLSFSSQVSQMPNSLSFPRSKSLVISHPKSNSPLVVSASATSAVETA 60

Query: 61  DLKTFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           +LK +VKS LPGGFAAQTLIGTGRRKSAVARVVL+EGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  ELKNYVKSRLPGGFAAQTLIGTGRRKSAVARVVLQEGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVRVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YV+VPL+TLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVS DHRSPLKKEGLLTR
Sbjct: 121 YVKVPLLTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSADHRSPLKKEGLLTR 180

Query: 181 DARVVERKKAGLKKARKAPQFSKR 205
           D+RVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

[Close]

BLAST of PI0008184 vs. NCBI nr
Match: XP_008466625.1 (PREDICTED: 30S ribosomal protein S9, chloroplastic [Cucumis melo] >KAA0051696.1 30S ribosomal protein S9 [Cucumis melo var. makuwa] >TYJ97914.1 30S ribosomal protein S9 [Cucumis melo var. makuwa])

HSP 1 Score: 359.4 bits (921), Expect = 2.1e-95
Identity = 197/204 (96.57%), Postives = 203/204 (99.51%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISPTSSTSPLVVSASAASAVETA 60
           MATSISSLAFSLSSLSFSSQVSHKP ALSFPRSKSLLISP+SSTSPL+VSASAA+AVETA
Sbjct: 1   MATSISSLAFSLSSLSFSSQVSHKPTALSFPRSKSLLISPSSSTSPLLVSASAAAAVETA 60

Query: 61  DLKTFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           DLK+FVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  DLKSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVRVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YV+VPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR
Sbjct: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180

Query: 181 DARVVERKKAGLKKARKAPQFSKR 205
           D+RVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

[Close]

BLAST of PI0008184 vs. NCBI nr
Match: XP_004147796.1 (30S ribosomal protein S9, chloroplastic [Cucumis sativus] >KGN59928.1 hypothetical protein Csa_002564 [Cucumis sativus])

HSP 1 Score: 354.4 bits (908), Expect = 6.7e-94
Identity = 194/204 (95.10%), Postives = 201/204 (98.53%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISPTSSTSPLVVSASAASAVETA 60
           MATSISSLAFSLSSLSFSSQVSHKP+ALSFPRSKSLLISP+SSTS LVV+ASAA+ VETA
Sbjct: 1   MATSISSLAFSLSSLSFSSQVSHKPSALSFPRSKSLLISPSSSTSSLVVTASAAAVVETA 60

Query: 61  DLKTFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           DLKTFVKSSLPGGFAAQTL GTGRRKSAVARVVLREGTGKVIINYR+AKEYLQGNPLWLQ
Sbjct: 61  DLKTFVKSSLPGGFAAQTLFGTGRRKSAVARVVLREGTGKVIINYREAKEYLQGNPLWLQ 120

Query: 121 YVRVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YV++PLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR
Sbjct: 121 YVKIPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180

Query: 181 DARVVERKKAGLKKARKAPQFSKR 205
           DARVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DARVVERKKAGLKKARKAPQFSKR 204

[Close]

BLAST of PI0008184 vs. NCBI nr
Match: XP_038903352.1 (30S ribosomal protein S9, chloroplastic [Benincasa hispida])

HSP 1 Score: 352.4 bits (903), Expect = 2.5e-93
Identity = 193/204 (94.61%), Postives = 200/204 (98.04%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISPTSSTSPLVVSASAASAVETA 60
           MATS+SSLAFSLSSLSFSSQVSHKPNALSFPRSKSL IS  SST+PLVVSASAA+ VETA
Sbjct: 1   MATSVSSLAFSLSSLSFSSQVSHKPNALSFPRSKSLQISHASSTTPLVVSASAAAGVETA 60

Query: 61  DLKTFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           DL++FVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  DLRSFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVRVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YV+VPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR
Sbjct: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180

Query: 181 DARVVERKKAGLKKARKAPQFSKR 205
           D+RVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

[Close]

BLAST of PI0008184 vs. NCBI nr
Match: XP_022143016.1 (30S ribosomal protein S9, chloroplastic [Momordica charantia])

HSP 1 Score: 336.3 bits (861), Expect = 1.9e-88
Identity = 182/204 (89.22%), Postives = 197/204 (96.57%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISPTSSTSPLVVSASAASAVETA 60
           MA+SISSLAFSLSSLSFSSQ+S KPN LSFPRSKSL+IS   ++SPLVVSASAA+ VETA
Sbjct: 1   MASSISSLAFSLSSLSFSSQISQKPNGLSFPRSKSLVISHPCNSSPLVVSASAATGVETA 60

Query: 61  DLKTFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           +L++FVKS LPGGFAAQTLIGTGRRKSA+ARVV++EGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  ELRSFVKSRLPGGFAAQTLIGTGRRKSAIARVVIQEGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVRVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YV+VPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHR+PLKKEGLLTR
Sbjct: 121 YVKVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRAPLKKEGLLTR 180

Query: 181 DARVVERKKAGLKKARKAPQFSKR 205
           D+RVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

[Close]

BLAST of PI0008184 vs. NCBI nr
Match: XP_022940950.1 (30S ribosomal protein S9, chloroplastic [Cucurbita moschata] >KAG6608514.1 30S ribosomal protein S9, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037838.1 30S ribosomal protein S9, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 335.9 bits (860), Expect = 2.5e-88
Identity = 185/204 (90.69%), Postives = 194/204 (95.10%), Query Frame = 0


Query: 1   MATSISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISPTSSTSPLVVSASAASAVETA 60
           MATS+SSLAFSLSSLSFSSQVS  PN+LSFPRSKSL+IS   S SPLVVSASA SAVETA
Sbjct: 1   MATSVSSLAFSLSSLSFSSQVSQMPNSLSFPRSKSLVISHPKSNSPLVVSASATSAVETA 60

Query: 61  DLKTFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQ 120
           +LK +VKS LPGGFAAQTLIGTGRRKSAVARVVL+EGTGKVIINYRDAKEYLQGNPLWLQ
Sbjct: 61  ELKNYVKSRLPGGFAAQTLIGTGRRKSAVARVVLQEGTGKVIINYRDAKEYLQGNPLWLQ 120

Query: 121 YVRVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTR 180
           YV+VPL+TLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVS DHRSPLKKEGLLTR
Sbjct: 121 YVKVPLLTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSADHRSPLKKEGLLTR 180

Query: 181 DARVVERKKAGLKKARKAPQFSKR 205
           D+RVVERKKAGLKKARKAPQFSKR
Sbjct: 181 DSRVVERKKAGLKKARKAPQFSKR 204

[Close]

BLAST of PI0008184 vs. TAIR 10
Match: AT1G74970.1 (ribosomal protein S9 )

HSP 1 Score: 283.9 bits (725), Expect = 1.0e-76
Identity = 156/206 (75.73%), Postives = 175/206 (84.95%), Query Frame = 0


Query: 4   SISSLAFSLSSLSFSSQVSHKPNALSFPRSKSLLISPTSSTSPLVVSASAASAV-----E 63
           SI++LA SLSSLSFSSQVS +PN +SFPR+ S+   P  S     +S +A  +      E
Sbjct: 3   SITNLASSLSSLSFSSQVSQRPNTISFPRANSVFALPAKSARRASLSITATVSAPPEEEE 62

Query: 64  TADLKTFVKSSLPGGFAAQTLIGTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLW 123
             +LK +VKS LPGGFAAQ +IGTGRRK A+ARVVL+EGTGKVIINYRDAKEYLQGNPLW
Sbjct: 63  IVELKKYVKSRLPGGFAAQKIIGTGRRKCAIARVVLQEGTGKVIINYRDAKEYLQGNPLW 122

Query: 124 LQYVRVPLVTLGYESSYDVFVKAEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLL 183
           LQYV+VPLVTLGYE+SYD+FVKA GGGLSGQAQAI+LG+ARALLKVS DHRSPLKKEGLL
Sbjct: 123 LQYVKVPLVTLGYENSYDIFVKAHGGGLSGQAQAITLGVARALLKVSADHRSPLKKEGLL 182

Query: 184 TRDARVVERKKAGLKKARKAPQFSKR 205
           TRDARVVERKKAGLKKARKAPQFSKR
Sbjct: 183 TRDARVVERKKAGLKKARKAPQFSKR 208

[Close]

BLAST of PI0008184 vs. TAIR 10
Match: AT3G49080.1 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 84.3 bits (207), Expect = 1.2e-16
Identity = 54/124 (43.55%), Postives = 72/124 (58.06%), Query Frame = 0


Query: 81  GTGRRKSAVARVVLREGTGKVIINYRDAKEYLQGNPLWLQYVRVPLVTLGYESSYDVFVK 140
           GTGRRK ++ARV ++ G GK  +N ++   Y          +R PL        +D+   
Sbjct: 308 GTGRRKCSIARVWIQPGEGKFQVNEKEFDVYFPMLDHRAALLR-PLAETKTLGRWDIKCT 367

Query: 141 AEGGGLSGQAQAISLGIARALLKVSDDHRSPLKKEGLLTRDARVVERKKAGLKKARKAPQ 200
            +GGG +GQ  AI LGI+RAL     D R+ L+  G LTRD+RVVERKK G  KARK+ Q
Sbjct: 368 VKGGGTTGQVGAIQLGISRALQNWEPDMRTSLRAAGFLTRDSRVVERKKPGKAKARKSFQ 427

Query: 201 FSKR 205
           + KR
Sbjct: 428 WVKR 430

The following BLAST results are available for this feature:

BLAST of PI0008184 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XJ27	1.5e-75	75.73	30S ribosomal protein S9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS9 ...	[more]
P82278	1.5e-72	72.12	30S ribosomal protein S9, chloroplastic OS=Spinacia oleracea OX=3562 GN=PRPS9 PE...	[more]
Q9MUV1	1.1e-35	66.40	30S ribosomal protein S9, chloroplastic OS=Mesostigma viride OX=41882 GN=rps9 PE...	[more]
Q8DMK7	1.5e-35	62.40	30S ribosomal protein S9 OS=Thermosynechococcus elongatus (strain BP-1) OX=19722...	[more]
B2ITM7	4.7e-34	60.48	30S ribosomal protein S9 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) O...	[more]

BLAST of PI0008184 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UBW5	1.0e-95	96.57	30S ribosomal protein S9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CRR0	1.0e-95	96.57	30S ribosomal protein S9, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503984 ...	[more]
A0A0A0LDS0	3.2e-94	95.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G854240 PE=3 SV=1	[more]
A0A6J1CNY0	9.1e-89	89.22	30S ribosomal protein S9, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1FS60	1.2e-88	90.69	30S ribosomal protein S9, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of PI0008184 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466625.1	2.1e-95	96.57	PREDICTED: 30S ribosomal protein S9, chloroplastic [Cucumis melo] >KAA0051696.1 ...	[more]
XP_004147796.1	6.7e-94	95.10	30S ribosomal protein S9, chloroplastic [Cucumis sativus] >KGN59928.1 hypothetic...	[more]
XP_038903352.1	2.5e-93	94.61	30S ribosomal protein S9, chloroplastic [Benincasa hispida]	[more]
XP_022143016.1	1.9e-88	89.22	30S ribosomal protein S9, chloroplastic [Momordica charantia]	[more]
XP_022940950.1	2.5e-88	90.69	30S ribosomal protein S9, chloroplastic [Cucurbita moschata] >KAG6608514.1 30S r...	[more]

BLAST of PI0008184 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74970.1	1.0e-76	75.73	ribosomal protein S9	[more]
AT3G49080.1	1.2e-16	43.55	Ribosomal protein S5 domain 2-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000754	Ribosomal protein S9	PFAM	PF00380	Ribosomal_S9	coord: 83..204 e-value: 3.0E-41 score: 140.7
IPR000754	Ribosomal protein S9	PANTHER	PTHR21569	RIBOSOMAL PROTEIN S9	coord: 59..204
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 70..204 e-value: 2.1E-49 score: 169.1
None	No IPR available	PANTHER	PTHR21569:SF1	28S RIBOSOMAL PROTEIN S9, MITOCHONDRIAL	coord: 59..204
IPR020574	Ribosomal protein S9, conserved site	PROSITE	PS00360	RIBOSOMAL_S9	coord: 143..161
IPR023035	Ribosomal protein S9, bacterial/plastid	HAMAP	MF_00532_B	Ribosomal_S9_B	coord: 74..204 score: 32.671982
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 78..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0008184.1	PI0008184.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0000312	plastid small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome