PI0008012 (gene) Melon (PI 482460) v1

Overview
NamePI0008012
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionStress response protein NST1-like
Locationchr07: 15860866 .. 15861702 (+)
RNA-Seq ExpressionPI0008012
SyntenyPI0008012
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGGATCTTCAAGCACGTATCAAGATCGCATCAAAGTTCGCTCTGATGCCCCTGAATCGGAGCAATCTGTATCGCGAAGGAGTGGCGAACAAAGAACGCCACAGTACACCCACCTGAAGCACAACAAAGGAAAGGTGTTGATAAAACCTCTACCAGAAGCAACCGAACTTTTTGAAGAAGTGGAGGTTGATAATTTGGATAAGGATGCCATACTTGAGTTCCTCAACGATCGGTTGAGAAAGCGAAAAGAGGCACACATGAAGAGAACAAAGGAAGCTCGCCGCAGAAAGGATGAGCGTGAGCGATTGAGATTTAAGGAACGACGTAAGGCGGGGAGTAAGTCCCTAGAAATACGCTCACCGCCTAACGAGGTCGTAGAGCTTCATAAGAAAATATCAGACAAGGTCGCTCAAGTCTCCTTCGACAAAACAAGGAAAACAATAGAGGCGTTCAAAACCGCCTTAAAAAGGAAGGAAGAGAAAAAGAAAATGTTCGCGGACCTAAGCGAACAAGTGGCAGAGCTCCCCGCGAAGTTTAAGGCTTTGGAGTCAGAGAGAGACCTCGAGGTCATCGCTGAAGAACTCGAGGATGAGCTGGAGGCGATGAGCCCAAATGAACAAAGGCCACCGCCTAGAAAACAAAGGGAGGTCACCGGACCACCCAAAGGGAAAAAGAAGGTTGGGAGCTCTGGACGTGAAGAGAAACCATCAGGAGGTGAAGCCAAAACGAAAACACCCTCAATCAACTCTCTCATAAAGGTTGAAAAAGGGTTGTTTCCATTTAATGGCCCACTCCCAGACTTCCTCTACGTGCCTATCCAGATGTTTGGCTAA

mRNA sequence

ATGGTTGGATCTTCAAGCACGTATCAAGATCGCATCAAAGTTCGCTCTGATGCCCCTGAATCGGAGCAATCTGTATCGCGAAGGAGTGGCGAACAAAGAACGCCACAGTACACCCACCTGAAGCACAACAAAGGAAAGGTGTTGATAAAACCTCTACCAGAAGCAACCGAACTTTTTGAAGAAGTGGAGGTTGATAATTTGGATAAGGATGCCATACTTGAGTTCCTCAACGATCGGTTGAGAAAGCGAAAAGAGGCACACATGAAGAGAACAAAGGAAGCTCGCCGCAGAAAGGATGAGCGTGAGCGATTGAGATTTAAGGAACGACGTAAGGCGGGGAGTAAGTCCCTAGAAATACGCTCACCGCCTAACGAGGTCGTAGAGCTTCATAAGAAAATATCAGACAAGGTCGCTCAAGTCTCCTTCGACAAAACAAGGAAAACAATAGAGGCGTTCAAAACCGCCTTAAAAAGGAAGGAAGAGAAAAAGAAAATGTTCGCGGACCTAAGCGAACAAGTGGCAGAGCTCCCCGCGAAGTTTAAGGCTTTGGAGTCAGAGAGAGACCTCGAGGTCATCGCTGAAGAACTCGAGGATGAGCTGGAGGCGATGAGCCCAAATGAACAAAGGCCACCGCCTAGAAAACAAAGGGAGGTCACCGGACCACCCAAAGGGAAAAAGAAGGTTGGGAGCTCTGGACGTGAAGAGAAACCATCAGGAGGTGAAGCCAAAACGAAAACACCCTCAATCAACTCTCTCATAAAGGTTGAAAAAGGGTTGTTTCCATTTAATGGCCCACTCCCAGACTTCCTCTACGTGCCTATCCAGATGTTTGGCTAA

Coding sequence (CDS)

ATGGTTGGATCTTCAAGCACGTATCAAGATCGCATCAAAGTTCGCTCTGATGCCCCTGAATCGGAGCAATCTGTATCGCGAAGGAGTGGCGAACAAAGAACGCCACAGTACACCCACCTGAAGCACAACAAAGGAAAGGTGTTGATAAAACCTCTACCAGAAGCAACCGAACTTTTTGAAGAAGTGGAGGTTGATAATTTGGATAAGGATGCCATACTTGAGTTCCTCAACGATCGGTTGAGAAAGCGAAAAGAGGCACACATGAAGAGAACAAAGGAAGCTCGCCGCAGAAAGGATGAGCGTGAGCGATTGAGATTTAAGGAACGACGTAAGGCGGGGAGTAAGTCCCTAGAAATACGCTCACCGCCTAACGAGGTCGTAGAGCTTCATAAGAAAATATCAGACAAGGTCGCTCAAGTCTCCTTCGACAAAACAAGGAAAACAATAGAGGCGTTCAAAACCGCCTTAAAAAGGAAGGAAGAGAAAAAGAAAATGTTCGCGGACCTAAGCGAACAAGTGGCAGAGCTCCCCGCGAAGTTTAAGGCTTTGGAGTCAGAGAGAGACCTCGAGGTCATCGCTGAAGAACTCGAGGATGAGCTGGAGGCGATGAGCCCAAATGAACAAAGGCCACCGCCTAGAAAACAAAGGGAGGTCACCGGACCACCCAAAGGGAAAAAGAAGGTTGGGAGCTCTGGACGTGAAGAGAAACCATCAGGAGGTGAAGCCAAAACGAAAACACCCTCAATCAACTCTCTCATAAAGGTTGAAAAAGGGTTGTTTCCATTTAATGGCCCACTCCCAGACTTCCTCTACGTGCCTATCCAGATGTTTGGCTAA

Protein sequence

MVGSSSTYQDRIKVRSDAPESEQSVSRRSGEQRTPQYTHLKHNKGKVLIKPLPEATELFEEVEVDNLDKDAILEFLNDRLRKRKEAHMKRTKEARRRKDERERLRFKERRKAGSKSLEIRSPPNEVVELHKKISDKVAQVSFDKTRKTIEAFKTALKRKEEKKKMFADLSEQVAELPAKFKALESERDLEVIAEELEDELEAMSPNEQRPPPRKQREVTGPPKGKKKVGSSGREEKPSGGEAKTKTPSINSLIKVEKGLFPFNGPLPDFLYVPIQMFG
Homology
[Close]
BLAST of PI0008012 vs. ExPASy TrEMBL
Match: A0A5D3DQE7 (Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00740 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 4.2e-04
Identity = 56/180 (31.11%), Postives = 90/180 (50.00%), Query Frame = 0 

Query: 98  KDERERLRFKERRKAGSKSLEIRSPPNEVVELHKKISDKVAQVSFDKTRKTIEAFKTALK 157
           K + E +R  + R    K+  ++   N+V+  H++ S K A+    + + T         
Sbjct: 84  KPDMETMRLDDNR---PKNKHLKHEANKVLVGHREASKKEAKTKLAEIQTT--------- 143

Query: 158 RKEEKKKMFADLSEQVAELPAKFKALESER--DLEVIAEELEDELEAMSPNEQRPPPRKQ 217
            K++K++  A LSEQV  +  + K  E +    ++V+ EE   E+E MSP   RP P ++
Sbjct: 144 -KKKKQETLASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEEK 203

Query: 218 R----EVTGPPKGKKKVGSSGREEKPSGGEAKTKTPSINSLIKVEKGLFPFNGPLPDFLY 272
                E     K K+K G+S  ++   G   K     ++ LIK+EKGL PFN PL +FLY
Sbjct: 204 GLTNIEFPKKSKSKRKAGTSRPKDIQRGN--KMSAQKLDKLIKIEKGLLPFNDPLLNFLY 248

[Close]
BLAST of PI0008012 vs. NCBI nr
Match: TYK25768.1 (stress response protein NST1-like [Cucumis melo var. makuwa])

HSP 1 Score: 55.5 bits (132), Expect = 8.8e-04
Identity = 56/180 (31.11%), Postives = 90/180 (50.00%), Query Frame = 0 

Query: 98  KDERERLRFKERRKAGSKSLEIRSPPNEVVELHKKISDKVAQVSFDKTRKTIEAFKTALK 157
           K + E +R  + R    K+  ++   N+V+  H++ S K A+    + + T         
Sbjct: 84  KPDMETMRLDDNR---PKNKHLKHEANKVLVGHREASKKEAKTKLAEIQTT--------- 143

Query: 158 RKEEKKKMFADLSEQVAELPAKFKALESER--DLEVIAEELEDELEAMSPNEQRPPPRKQ 217
            K++K++  A LSEQV  +  + K  E +    ++V+ EE   E+E MSP   RP P ++
Sbjct: 144 -KKKKQETLASLSEQVESVVTRSKVAEHQEVDRVDVMVEEFSREIEGMSPLGPRPRPEEK 203

Query: 218 R----EVTGPPKGKKKVGSSGREEKPSGGEAKTKTPSINSLIKVEKGLFPFNGPLPDFLY 272
                E     K K+K G+S  ++   G   K     ++ LIK+EKGL PFN PL +FLY
Sbjct: 204 GLTNIEFPKKSKSKRKAGTSRPKDIQRGN--KMSAQKLDKLIKIEKGLLPFNDPLLNFLY 248

The following BLAST results are available for this feature:
BLAST of PI0008012 vs.
Match NameE-valueIdentityDescription
BLAST of PI0008012 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DQE74.2e-0431.11Stress response protein NST1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
BLAST of PI0008012 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK25768.18.8e-0431.11stress response protein NST1-like [Cucumis melo var. makuwa][more]
BLAST of PI0008012 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 77..97
NoneNo IPR availableCOILSCoilCoilcoord: 142..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 210..241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..250

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0008012.1PI0008012.1mRNA