PI0007948 (gene) Melon (PI 482460) v1

Overview


Name	PI0007948
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr04: 15882483 .. 15882839 (+)
RNA-Seq Expression	PI0007948
Synteny	PI0007948

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAAAGCTATGAGGACCAGGAAGAACTGCGGCGCCGTGGGATTCAGTTTCGGAGGCGGCGAAGAATGGCAGTGGCACGACTTGGGGGGAAGAGATCGGGGCGGATCGTGGCATGGGGGAGGATGGTGAGGAAGATAAGACTGAAATGGGTGAAAATGAAATGCATAGAGATGGTGAAGAAGATGAAAAAATACTACAAGAAGTTGATGAAGGATATAATGGAAGCAGGAGCTTATGGATATGCTGACTCATATCAACATAGACTTCTTTTGGAGACTTCTTTTGCTATTCCAATTCTGGGTGTCTCTCTTTCTACTCATTCTAGTATTCATGCTGCTGCTGCTACTTCATAA

mRNA sequence

ATGGCTGAAAGCTATGAGGACCAGGAAGAACTGCGGCGCCGTGGGATTCAGTTTCGGAGGCGGCGAAGAATGGCAGTGGCACGACTTGGGGGGAAGAGATCGGGGCGGATCGTGGCATGGGGGAGGATGGTGAGGAAGATAAGACTGAAATGGGTGAAAATGAAATGCATAGAGATGGTGAAGAAGATGAAAAAATACTACAAGAAGTTGATGAAGGATATAATGGAAGCAGGAGCTTATGGATATGCTGACTCATATCAACATAGACTTCTTTTGGAGACTTCTTTTGCTATTCCAATTCTGGGTGTCTCTCTTTCTACTCATTCTAGTATTCATGCTGCTGCTGCTACTTCATAA

Coding sequence (CDS)

ATGGCTGAAAGCTATGAGGACCAGGAAGAACTGCGGCGCCGTGGGATTCAGTTTCGGAGGCGGCGAAGAATGGCAGTGGCACGACTTGGGGGGAAGAGATCGGGGCGGATCGTGGCATGGGGGAGGATGGTGAGGAAGATAAGACTGAAATGGGTGAAAATGAAATGCATAGAGATGGTGAAGAAGATGAAAAAATACTACAAGAAGTTGATGAAGGATATAATGGAAGCAGGAGCTTATGGATATGCTGACTCATATCAACATAGACTTCTTTTGGAGACTTCTTTTGCTATTCCAATTCTGGGTGTCTCTCTTTCTACTCATTCTAGTATTCATGCTGCTGCTGCTACTTCATAA

Protein sequence

MAESYEDQEELRRRGIQFRRRRRMAVARLGGKRSGRIVAWGRMVRKIRLKWVKMKCIEMVKKMKKYYKKLMKDIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSSIHAAAATS

Homology

[Close]

BLAST of PI0007948 vs. ExPASy TrEMBL
Match: A0A5D3DCV1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45855G00010 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.7e-48
Identity = 112/120 (93.33%), Postives = 115/120 (95.83%), Query Frame = 0


Query: 1   MAESYED-QEELRRRGIQFRRRRRMAVARLGGKRSGRIVAWGRMVRKIRLKWVKMKCIEM 60
           MAESY D QEELRR GIQFRRRR+MAVARLGGKRSGRI+AWGR+VRKIRLKWVKMKCIEM
Sbjct: 1   MAESYGDHQEELRRHGIQFRRRRKMAVARLGGKRSGRIMAWGRIVRKIRLKWVKMKCIEM 60

Query: 61  VKKMKKYYKKLMKDIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSS-IHAAAATS 119
           VKKMKKYYKKLMKDIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSS IHAAAA S
Sbjct: 61  VKKMKKYYKKLMKDIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSSIIHAAAAAS 120

[Close]

BLAST of PI0007948 vs. ExPASy TrEMBL
Match: A0A0A0LBW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G644780 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.7e-48
Identity = 110/119 (92.44%), Postives = 113/119 (94.96%), Query Frame = 0


Query: 1   MAESYED-QEELRRRGIQFRRRRRMAVARLGGKRSGRIVAWGRMVRKIRLKWVKMKCIEM 60
           MA SYED QEELRR GIQFRRRRRMAVARLGGKRSGRIV WGR+VRKIRLKWVKMKCIEM
Sbjct: 1   MAGSYEDHQEELRRCGIQFRRRRRMAVARLGGKRSGRIVGWGRIVRKIRLKWVKMKCIEM 60

Query: 61  VKKMKKYYKKLMKDIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSSIHAAAATS 119
           VKKMKKYYK+LMKDIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSSIHAA A +
Sbjct: 61  VKKMKKYYKELMKDIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSSIHAATAAT 119

[Close]

BLAST of PI0007948 vs. ExPASy TrEMBL
Match: A0A6J1GVZ8 (uncharacterized protein LOC111458050 OS=Cucurbita moschata OX=3662 GN=LOC111458050 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.4e-33
Identity = 84/104 (80.77%), Postives = 95/104 (91.35%), Query Frame = 0


Query: 13  RRGIQFRRRRRMAVARLGGKRSGRIVAWGRMVRKIRLKWVKMKCIEMVKKMKKYYKKLMK 72
           RRG++F RRRRM VARLGGKRSGR+VAWGRM+RKIRL+WVK+KCI MVKKMK+YY +LMK
Sbjct: 25  RRGMRF-RRRRMPVARLGGKRSGRLVAWGRMLRKIRLRWVKLKCIAMVKKMKEYYTRLMK 84

Query: 73  DIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSSIHAAAA 117
           DI+EAGA  YA SYQHRLLLETSFAIPILGVSLSTHSS+ AA +
Sbjct: 85  DIIEAGA--YARSYQHRLLLETSFAIPILGVSLSTHSSVLAATS 125

[Close]

BLAST of PI0007948 vs. ExPASy TrEMBL
Match: A0A6J1GAR0 (uncharacterized protein LOC111452314 OS=Cucurbita moschata OX=3662 GN=LOC111452314 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 7.0e-33
Identity = 85/104 (81.73%), Postives = 94/104 (90.38%), Query Frame = 0


Query: 13  RRGIQFRRRRRMAVARLGGKRSGRIVAWGRMVRKIRLKWVKMKCIEMVKKMKKYYKKLMK 72
           R+GIQF RRRRMAVARLGGKRSGR+VAWGR +RKIRL+WVK+KCI MVKK+KKY   LMK
Sbjct: 22  RQGIQF-RRRRMAVARLGGKRSGRLVAWGRRLRKIRLRWVKLKCIAMVKKVKKYCASLMK 81

Query: 73  DIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSSIHAAAA 117
           D+MEAGAYG  DSYQHRLLLETSFAIPILGVS STHS+ HAAA+
Sbjct: 82  DMMEAGAYG--DSYQHRLLLETSFAIPILGVSFSTHST-HAAAS 121

[Close]

BLAST of PI0007948 vs. ExPASy TrEMBL
Match: A0A6J1D3L4 (uncharacterized protein LOC111016963 OS=Momordica charantia OX=3673 GN=LOC111016963 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 3.0e-23
Identity = 71/115 (61.74%), Postives = 86/115 (74.78%), Query Frame = 0


Query: 1   MAESYEDQEE-----LRRRGIQFRRRRRMAVARLGGKRSGRIVA-WGRMVRKIRLKWVKM 60
           M E YE +         RRGIQFRRRRRM VARLGG  SG      GRMVRKIR++WVK+
Sbjct: 28  MGEGYETENGPGLRCAARRGIQFRRRRRMPVARLGGPGSGSGPGRLGRMVRKIRVRWVKL 87

Query: 61  KCIEMVKKMKKYYKKLMKDIMEA-GAYGYADSYQHRLLLETSFAIPILGVSLSTH 109
           +C+ MVKKMKK+Y+K++KD++EA  A  Y +SYQHR+LLETSFAIPIL  SLST+
Sbjct: 88  RCLAMVKKMKKWYRKVLKDVIEAQAAVAYPESYQHRVLLETSFAIPILPRSLSTY 142

[Close]

BLAST of PI0007948 vs. NCBI nr
Match: KAA0053479.1 (uncharacterized protein E6C27_scaffold190G00270 [Cucumis melo var. makuwa] >TYK21501.1 uncharacterized protein E5676_scaffold45855G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 201.1 bits (510), Expect = 5.5e-48
Identity = 112/120 (93.33%), Postives = 115/120 (95.83%), Query Frame = 0


Query: 1   MAESYED-QEELRRRGIQFRRRRRMAVARLGGKRSGRIVAWGRMVRKIRLKWVKMKCIEM 60
           MAESY D QEELRR GIQFRRRR+MAVARLGGKRSGRI+AWGR+VRKIRLKWVKMKCIEM
Sbjct: 1   MAESYGDHQEELRRHGIQFRRRRKMAVARLGGKRSGRIMAWGRIVRKIRLKWVKMKCIEM 60

Query: 61  VKKMKKYYKKLMKDIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSS-IHAAAATS 119
           VKKMKKYYKKLMKDIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSS IHAAAA S
Sbjct: 61  VKKMKKYYKKLMKDIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSSIIHAAAAAS 120

[Close]

BLAST of PI0007948 vs. NCBI nr
Match: XP_011652825.1 (uncharacterized protein LOC105435118 [Cucumis sativus] >KGN58439.1 hypothetical protein Csa_000856 [Cucumis sativus])

HSP 1 Score: 201.1 bits (510), Expect = 5.5e-48
Identity = 110/119 (92.44%), Postives = 113/119 (94.96%), Query Frame = 0


Query: 1   MAESYED-QEELRRRGIQFRRRRRMAVARLGGKRSGRIVAWGRMVRKIRLKWVKMKCIEM 60
           MA SYED QEELRR GIQFRRRRRMAVARLGGKRSGRIV WGR+VRKIRLKWVKMKCIEM
Sbjct: 1   MAGSYEDHQEELRRCGIQFRRRRRMAVARLGGKRSGRIVGWGRIVRKIRLKWVKMKCIEM 60

Query: 61  VKKMKKYYKKLMKDIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSSIHAAAATS 119
           VKKMKKYYK+LMKDIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSSIHAA A +
Sbjct: 61  VKKMKKYYKELMKDIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSSIHAATAAT 119

[Close]

BLAST of PI0007948 vs. NCBI nr
Match: XP_038891072.1 (uncharacterized protein LOC120080455 [Benincasa hispida])

HSP 1 Score: 162.2 bits (409), Expect = 2.8e-36
Identity = 97/125 (77.60%), Postives = 104/125 (83.20%), Query Frame = 0


Query: 1   MAESYEDQE-----ELR---RRGIQFRRRRRMAVARLGGKRSGRIVAWGRMVRKIRLKWV 60
           MA+SYE  E      LR   RRGIQF RRRRM VARLGGKRSGRIVAWGRM+RKIRL+WV
Sbjct: 1   MAQSYEQGEGQPAAGLRWGMRRGIQF-RRRRMPVARLGGKRSGRIVAWGRMLRKIRLRWV 60

Query: 61  KMKCIEMVKKMKKYYKKLMKDIMEAGAYGY-ADSYQHRLLLETSFAIPILGVSLSTHSSI 117
           K+KCI MVKK+KKYY  LMKDIME GAYGY ADSYQHRLL+ETSFAIPILGVSLSTHSSI
Sbjct: 61  KVKCIAMVKKIKKYYTSLMKDIMEGGAYGYAADSYQHRLLMETSFAIPILGVSLSTHSSI 120

[Close]

BLAST of PI0007948 vs. NCBI nr
Match: XP_022956317.1 (uncharacterized protein LOC111458050 [Cucurbita moschata])

HSP 1 Score: 151.4 bits (381), Expect = 5.0e-33
Identity = 84/104 (80.77%), Postives = 95/104 (91.35%), Query Frame = 0


Query: 13  RRGIQFRRRRRMAVARLGGKRSGRIVAWGRMVRKIRLKWVKMKCIEMVKKMKKYYKKLMK 72
           RRG++F RRRRM VARLGGKRSGR+VAWGRM+RKIRL+WVK+KCI MVKKMK+YY +LMK
Sbjct: 25  RRGMRF-RRRRMPVARLGGKRSGRLVAWGRMLRKIRLRWVKLKCIAMVKKMKEYYTRLMK 84

Query: 73  DIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSSIHAAAA 117
           DI+EAGA  YA SYQHRLLLETSFAIPILGVSLSTHSS+ AA +
Sbjct: 85  DIIEAGA--YARSYQHRLLLETSFAIPILGVSLSTHSSVLAATS 125

[Close]

BLAST of PI0007948 vs. NCBI nr
Match: KAG7018218.1 (hypothetical protein SDJN02_20086, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 151.0 bits (380), Expect = 6.5e-33
Identity = 87/120 (72.50%), Postives = 101/120 (84.17%), Query Frame = 0


Query: 1   MAESYEDQEEL----RRRGIQFRRRRRMAVARLGGKRSGRIVAWGRMVRKIRLKWVKMKC 60
           M + YE +E       RRG++F RRRRM VARLGGKRSGR+VAWGRM+RKIRL+WVK+KC
Sbjct: 1   MGQPYEPEEGQPGAGLRRGMRF-RRRRMPVARLGGKRSGRLVAWGRMLRKIRLRWVKLKC 60

Query: 61  IEMVKKMKKYYKKLMKDIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSSIHAAAA 117
           I MVKKMK+YY +LMKDI+EAGA  YA SYQHR+LLETSFAIPILGVSLSTHSS+ AA +
Sbjct: 61  IAMVKKMKEYYTRLMKDIIEAGA--YAHSYQHRVLLETSFAIPILGVSLSTHSSVLAATS 117

[Close]

BLAST of PI0007948 vs. TAIR 10
Match: AT1G54120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14060.1); Has 23 Blast hits to 23 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.8 bits (138), Expect = 7.0e-09
Identity = 42/103 (40.78%), Postives = 68/103 (66.02%), Query Frame = 0


Query: 13  RRGIQFRRRRRMAVARLGGKRSGRIVAWG-----RMVRKIRLKWVKMKCIEMVKKMKKYY 72
           RR I  RRR+   V RLGGK S   V+ G     +MVR+++L+W+K+  + +VKK+K +Y
Sbjct: 17  RRKIHIRRRKSQ-VVRLGGKNSA--VSRGGFSLKKMVRRMKLRWLKLHYVRVVKKIKVFY 76

Query: 73  KKLMKDIMEAGAYGYADSYQHRLLLE-TSFAIPILGVSLSTHS 110
           + L+K+ ++AGA    ++ Q R+ +E  +FA+P LG+S S+ S
Sbjct: 77  RNLVKEFVDAGA--ELEAIQQRMAVEAAAFAVPGLGLSFSSFS 114

[Close]

BLAST of PI0007948 vs. TAIR 10
Match: AT3G14060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54120.1); Has 30 Blast hits to 30 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.1 bits (126), Expect = 1.7e-07
Identity = 36/90 (40.00%), Postives = 59/90 (65.56%), Query Frame = 0


Query: 18  FRRRRRMAVARLGGKRSGRIVAWG--RMVRKIRLKWVKMKCIEMVKKMKKYYKKLMKDIM 77
           + RRR+  V RLGGK S    ++   ++V ++RLKW+++  + +VKK+K YY+ ++K+  
Sbjct: 24  YLRRRKPQVVRLGGKNSTPRGSFSLKKVVTRMRLKWLRLYYVRLVKKIKAYYRTIVKEFE 83

Query: 78  EAGAYGYADSYQHRLLLET-SFAIPILGVS 105
           EAG    A + Q R+ +ET +FA P LG+S
Sbjct: 84  EAG----AATIQQRMTVETAAFAAPGLGLS 109

The following BLAST results are available for this feature:

BLAST of PI0007948 vs.


Match Name	E-value	Identity	Description

BLAST of PI0007948 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DCV1	2.7e-48	93.33	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LBW7	2.7e-48	92.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G644780 PE=4 SV=1	[more]
A0A6J1GVZ8	2.4e-33	80.77	uncharacterized protein LOC111458050 OS=Cucurbita moschata OX=3662 GN=LOC1114580...	[more]
A0A6J1GAR0	7.0e-33	81.73	uncharacterized protein LOC111452314 OS=Cucurbita moschata OX=3662 GN=LOC1114523...	[more]
A0A6J1D3L4	3.0e-23	61.74	uncharacterized protein LOC111016963 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]

BLAST of PI0007948 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053479.1	5.5e-48	93.33	uncharacterized protein E6C27_scaffold190G00270 [Cucumis melo var. makuwa] >TYK2...	[more]
XP_011652825.1	5.5e-48	92.44	uncharacterized protein LOC105435118 [Cucumis sativus] >KGN58439.1 hypothetical ...	[more]
XP_038891072.1	2.8e-36	77.60	uncharacterized protein LOC120080455 [Benincasa hispida]	[more]
XP_022956317.1	5.0e-33	80.77	uncharacterized protein LOC111458050 [Cucurbita moschata]	[more]
KAG7018218.1	6.5e-33	72.50	hypothetical protein SDJN02_20086, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of PI0007948 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54120.1	7.0e-09	40.78	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G14060.1	1.7e-07	40.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34788	F15I1.22	coord: 10..111
None	No IPR available	PANTHER	PTHR34788:SF4	F15I1.22	coord: 10..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0007948.1	PI0007948.1	mRNA