PI0007806 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACCTCACTCTTTTTCCTTTTACTACACGGAGGGGGAGACAGTTCAGAAGACGGGGAAGAAGGCTGTGGCGCCTCCACGGCCGACACCACCGCAGGTTTATAAGGTGGATCCGATCAACTTCCGGGATGTTGTTCAGAAGCTAACTGCAGCTCCTGAGTTTCAGGATCGTCGTCTTCAAGCCATGCCGCCTCCACGGTCTAATGTTGCTGATCAGTCCCGACGACCTTTGGTTGGTCGTCTGGATTTGTCTATGGAGGGAGAGGGTGGTGCTGTTTCTTACAATGGCTTTTTCTTGGGACAGTCCTCTGAGAGATATTAG ATGGAACCTCACTCTTTTTCCTTTTACTACACGGAGGGGGAGACAGTTCAGAAGACGGGGAAGAAGGCTGTGGCGCCTCCACGGCCGACACCACCGCAGGTTTATAAGGTGGATCCGATCAACTTCCGGGATGTTGTTCAGAAGCTAACTGCAGCTCCTGAGTTTCAGGATCGTCGTCTTCAAGCCATGCCGCCTCCACGGTCTAATGTTGCTGATCAGTCCCGACGACCTTTGGTTGGTCGTCTGGATTTGTCTATGGAGGGAGAGGGTGGTGCTGTTTCTTACAATGGCTTTTTCTTGGGACAGTCCTCTGAGAGATATTAG ATGGAACCTCACTCTTTTTCCTTTTACTACACGGAGGGGGAGACAGTTCAGAAGACGGGGAAGAAGGCTGTGGCGCCTCCACGGCCGACACCACCGCAGGTTTATAAGGTGGATCCGATCAACTTCCGGGATGTTGTTCAGAAGCTAACTGCAGCTCCTGAGTTTCAGGATCGTCGTCTTCAAGCCATGCCGCCTCCACGGTCTAATGTTGCTGATCAGTCCCGACGACCTTTGGTTGGTCGTCTGGATTTGTCTATGGAGGGAGAGGGTGGTGCTGTTTCTTACAATGGCTTTTTCTTGGGACAGTCCTCTGAGAGATATTAG MEPHSFSFYYTEGETVQKTGKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPPPRSNVADQSRRPLVGRLDLSMEGEGGAVSYNGFFLGQSSERY Homology
BLAST of PI0007806 vs. ExPASy TrEMBL
Match: A0A5A7TW54 (VQ motif-containing protein 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00880 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 5.2e-43 Identity = 94/108 (87.04%), Postives = 97/108 (89.81%), Query Frame = 0
BLAST of PI0007806 vs. ExPASy TrEMBL
Match: A0A0A0LPS3 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G271490 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 3.3e-29 Identity = 73/96 (76.04%), Postives = 78/96 (81.25%), Query Frame = 0
BLAST of PI0007806 vs. ExPASy TrEMBL
Match: A0A6J1D7B4 (VQ motif-containing protein 29 OS=Momordica charantia OX=3673 GN=LOC111017949 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 2.7e-15 Identity = 58/107 (54.21%), Postives = 65/107 (60.75%), Query Frame = 0
BLAST of PI0007806 vs. ExPASy TrEMBL
Match: A0A7N2R6U6 (VQ domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 3.6e-12 Identity = 47/86 (54.65%), Postives = 61/86 (70.93%), Query Frame = 0
BLAST of PI0007806 vs. ExPASy TrEMBL
Match: A0A2N9FPV7 (VQ domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20638 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.2e-10 Identity = 40/71 (56.34%), Postives = 50/71 (70.42%), Query Frame = 0
BLAST of PI0007806 vs. NCBI nr
Match: KAA0045761.1 (VQ motif-containing protein 29 [Cucumis melo var. makuwa] >TYJ99521.1 VQ motif-containing protein 29 [Cucumis melo var. makuwa]) HSP 1 Score: 183.3 bits (464), Expect = 1.1e-42 Identity = 94/108 (87.04%), Postives = 97/108 (89.81%), Query Frame = 0
BLAST of PI0007806 vs. NCBI nr
Match: KAE8651906.1 (hypothetical protein Csa_006780 [Cucumis sativus]) HSP 1 Score: 155.6 bits (392), Expect = 2.4e-34 Identity = 83/108 (76.85%), Postives = 88/108 (81.48%), Query Frame = 0
BLAST of PI0007806 vs. NCBI nr
Match: KAG6605217.1 (hypothetical protein SDJN03_02534, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 91.7 bits (226), Expect = 4.2e-15 Identity = 48/83 (57.83%), Postives = 59/83 (71.08%), Query Frame = 0
BLAST of PI0007806 vs. NCBI nr
Match: XP_022149539.1 (VQ motif-containing protein 29 [Momordica charantia]) HSP 1 Score: 91.3 bits (225), Expect = 5.5e-15 Identity = 58/107 (54.21%), Postives = 65/107 (60.75%), Query Frame = 0
BLAST of PI0007806 vs. NCBI nr
Match: XP_030973483.1 (uncharacterized protein LOC115993677 [Quercus lobata]) HSP 1 Score: 80.9 bits (198), Expect = 7.5e-12 Identity = 47/86 (54.65%), Postives = 61/86 (70.93%), Query Frame = 0
BLAST of PI0007806 vs. TAIR 10
Match: AT4G37710.1 (VQ motif-containing protein ) HSP 1 Score: 40.8 bits (94), Expect = 8.0e-04 Identity = 24/66 (36.36%), Postives = 39/66 (59.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|