PI0007806 (gene) Melon (PI 482460) v1

Overview
NamePI0007806
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionVQ domain-containing protein
Locationchr11: 28816799 .. 28817122 (+)
RNA-Seq ExpressionPI0007806
SyntenyPI0007806
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACCTCACTCTTTTTCCTTTTACTACACGGAGGGGGAGACAGTTCAGAAGACGGGGAAGAAGGCTGTGGCGCCTCCACGGCCGACACCACCGCAGGTTTATAAGGTGGATCCGATCAACTTCCGGGATGTTGTTCAGAAGCTAACTGCAGCTCCTGAGTTTCAGGATCGTCGTCTTCAAGCCATGCCGCCTCCACGGTCTAATGTTGCTGATCAGTCCCGACGACCTTTGGTTGGTCGTCTGGATTTGTCTATGGAGGGAGAGGGTGGTGCTGTTTCTTACAATGGCTTTTTCTTGGGACAGTCCTCTGAGAGATATTAG

mRNA sequence

ATGGAACCTCACTCTTTTTCCTTTTACTACACGGAGGGGGAGACAGTTCAGAAGACGGGGAAGAAGGCTGTGGCGCCTCCACGGCCGACACCACCGCAGGTTTATAAGGTGGATCCGATCAACTTCCGGGATGTTGTTCAGAAGCTAACTGCAGCTCCTGAGTTTCAGGATCGTCGTCTTCAAGCCATGCCGCCTCCACGGTCTAATGTTGCTGATCAGTCCCGACGACCTTTGGTTGGTCGTCTGGATTTGTCTATGGAGGGAGAGGGTGGTGCTGTTTCTTACAATGGCTTTTTCTTGGGACAGTCCTCTGAGAGATATTAG

Coding sequence (CDS)

ATGGAACCTCACTCTTTTTCCTTTTACTACACGGAGGGGGAGACAGTTCAGAAGACGGGGAAGAAGGCTGTGGCGCCTCCACGGCCGACACCACCGCAGGTTTATAAGGTGGATCCGATCAACTTCCGGGATGTTGTTCAGAAGCTAACTGCAGCTCCTGAGTTTCAGGATCGTCGTCTTCAAGCCATGCCGCCTCCACGGTCTAATGTTGCTGATCAGTCCCGACGACCTTTGGTTGGTCGTCTGGATTTGTCTATGGAGGGAGAGGGTGGTGCTGTTTCTTACAATGGCTTTTTCTTGGGACAGTCCTCTGAGAGATATTAG

Protein sequence

MEPHSFSFYYTEGETVQKTGKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPPPRSNVADQSRRPLVGRLDLSMEGEGGAVSYNGFFLGQSSERY
Homology
BLAST of PI0007806 vs. ExPASy TrEMBL
Match: A0A5A7TW54 (VQ motif-containing protein 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00880 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.2e-43
Identity = 94/108 (87.04%), Postives = 97/108 (89.81%), Query Frame = 0

Query: 1   MEPHSFSFYYT-EGETVQKTGKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRR 60
           MEPHSFSFYYT +G +VQKTGKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRR
Sbjct: 1   MEPHSFSFYYTDQGASVQKTGKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRR 60

Query: 61  LQAMPPPRSNVADQSRRPLVGRLDLSMEGEGGAVSYNGFFLGQSSERY 108
           LQAMPPPR NVADQSRRP     D S EGEGG VSY+GFFLGQSSERY
Sbjct: 61  LQAMPPPRPNVADQSRRP----RDSSGEGEGGVVSYHGFFLGQSSERY 104

BLAST of PI0007806 vs. ExPASy TrEMBL
Match: A0A0A0LPS3 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G271490 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.3e-29
Identity = 73/96 (76.04%), Postives = 78/96 (81.25%), Query Frame = 0

Query: 12  EGETVQKTGKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPPPRSNVA 71
           +G  VQKTGKK VAPPRP+PPQVYKVDPINFRDVVQKLTAAP+FQDRRLQAMPPPR ++A
Sbjct: 3   QGAPVQKTGKKPVAPPRPSPPQVYKVDPINFRDVVQKLTAAPQFQDRRLQAMPPPRPDLA 62

Query: 72  DQSRRPLVGRLDLSMEGEGGAVSYNGFFLGQSSERY 108
           DQS RP     DLS EGEG      GFFLGQSS RY
Sbjct: 63  DQSSRP----RDLSGEGEG------GFFLGQSSHRY 88

BLAST of PI0007806 vs. ExPASy TrEMBL
Match: A0A6J1D7B4 (VQ motif-containing protein 29 OS=Momordica charantia OX=3673 GN=LOC111017949 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.7e-15
Identity = 58/107 (54.21%), Postives = 65/107 (60.75%), Query Frame = 0

Query: 1   MEPHSFSFYYTEGETVQKTGKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRL 60
           MEPHS S          K   +AVAP  PTPPQ+YKV+P++FRDVVQKLTAAPEFQDRRL
Sbjct: 1   MEPHSSS-----SSPAVKPWNRAVAPLPPTPPQIYKVNPVDFRDVVQKLTAAPEFQDRRL 60

Query: 61  QAMPPPRSNVADQSRRPLVGRLDLSMEGEGGAVSYNGFFLGQSSERY 108
           QAMP PR +    S        D S E   GAV Y G+     SERY
Sbjct: 61  QAMPAPRPSPPPGS----AACTDFSGE---GAVIYYGYPGVGFSERY 95

BLAST of PI0007806 vs. ExPASy TrEMBL
Match: A0A7N2R6U6 (VQ domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 3.6e-12
Identity = 47/86 (54.65%), Postives = 61/86 (70.93%), Query Frame = 0

Query: 3   PHSF-SFYYTEGETVQKTGKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDR-RL 62
           PH F S  +T  +T  K  KK VAP  PTPP++YKVDPINFRD+VQKLT A EFQ + RL
Sbjct: 27  PHPFNSSLHTVKKTPTKPWKKPVAPLPPTPPRIYKVDPINFRDLVQKLTGATEFQSKQRL 86

Query: 63  QAMPPPRSNVADQSRRPLVGRLDLSM 87
           Q++ PP  NVA+ S +PL+   ++S+
Sbjct: 87  QSVAPPPLNVAN-STQPLMCNRNISV 111

BLAST of PI0007806 vs. ExPASy TrEMBL
Match: A0A2N9FPV7 (VQ domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20638 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.2e-10
Identity = 40/71 (56.34%), Postives = 50/71 (70.42%), Query Frame = 0

Query: 3   PHSF-SFYYTEGETVQKTGKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQ 62
           P  F S  +T  +   K  KK VAP  PTPP++YKVDPINFRD+VQKLT A EFQ +RLQ
Sbjct: 30  PQQFNSSLHTVRKPPSKPWKKPVAPLPPTPPRIYKVDPINFRDLVQKLTGANEFQSQRLQ 89

Query: 63  AMPPPRSNVAD 73
           ++ PP  NV++
Sbjct: 90  SVAPPPLNVSN 100

BLAST of PI0007806 vs. NCBI nr
Match: KAA0045761.1 (VQ motif-containing protein 29 [Cucumis melo var. makuwa] >TYJ99521.1 VQ motif-containing protein 29 [Cucumis melo var. makuwa])

HSP 1 Score: 183.3 bits (464), Expect = 1.1e-42
Identity = 94/108 (87.04%), Postives = 97/108 (89.81%), Query Frame = 0

Query: 1   MEPHSFSFYYT-EGETVQKTGKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRR 60
           MEPHSFSFYYT +G +VQKTGKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRR
Sbjct: 1   MEPHSFSFYYTDQGASVQKTGKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRR 60

Query: 61  LQAMPPPRSNVADQSRRPLVGRLDLSMEGEGGAVSYNGFFLGQSSERY 108
           LQAMPPPR NVADQSRRP     D S EGEGG VSY+GFFLGQSSERY
Sbjct: 61  LQAMPPPRPNVADQSRRP----RDSSGEGEGGVVSYHGFFLGQSSERY 104

BLAST of PI0007806 vs. NCBI nr
Match: KAE8651906.1 (hypothetical protein Csa_006780 [Cucumis sativus])

HSP 1 Score: 155.6 bits (392), Expect = 2.4e-34
Identity = 83/108 (76.85%), Postives = 88/108 (81.48%), Query Frame = 0

Query: 1   MEPHSFSFYY-TEGETVQKTGKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRR 60
           MEPHSFSFYY  +G  VQKTGKK VAPPRP+PPQVYKVDPINFRDVVQKLTAAP+FQDRR
Sbjct: 1   MEPHSFSFYYMDQGAPVQKTGKKPVAPPRPSPPQVYKVDPINFRDVVQKLTAAPQFQDRR 60

Query: 61  LQAMPPPRSNVADQSRRPLVGRLDLSMEGEGGAVSYNGFFLGQSSERY 108
           LQAMPPPR ++ADQS RP     DLS EGEG      GFFLGQSS RY
Sbjct: 61  LQAMPPPRPDLADQSSRP----RDLSGEGEG------GFFLGQSSHRY 98

BLAST of PI0007806 vs. NCBI nr
Match: KAG6605217.1 (hypothetical protein SDJN03_02534, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 91.7 bits (226), Expect = 4.2e-15
Identity = 48/83 (57.83%), Postives = 59/83 (71.08%), Query Frame = 0

Query: 1  MEPH-------SFSFYYTEGETVQKTG----KKAVAPPRPTPPQVYKVDPINFRDVVQKL 60
          MEPH       SFSFYY++ + V K      KKAVAPP P PP+VYKV+PI FRDVVQKL
Sbjct: 1  MEPHSYSSSSSSFSFYYSDPDGVHKASSRSPKKAVAPPPPMPPRVYKVEPIEFRDVVQKL 60

Query: 61 TAAPEFQDRRLQAMPPPRSNVAD 73
          T+ PE+ D RL+AMP PR N+++
Sbjct: 61 TSPPEYLDPRLKAMPAPRPNLSN 83

BLAST of PI0007806 vs. NCBI nr
Match: XP_022149539.1 (VQ motif-containing protein 29 [Momordica charantia])

HSP 1 Score: 91.3 bits (225), Expect = 5.5e-15
Identity = 58/107 (54.21%), Postives = 65/107 (60.75%), Query Frame = 0

Query: 1   MEPHSFSFYYTEGETVQKTGKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRL 60
           MEPHS S          K   +AVAP  PTPPQ+YKV+P++FRDVVQKLTAAPEFQDRRL
Sbjct: 1   MEPHSSS-----SSPAVKPWNRAVAPLPPTPPQIYKVNPVDFRDVVQKLTAAPEFQDRRL 60

Query: 61  QAMPPPRSNVADQSRRPLVGRLDLSMEGEGGAVSYNGFFLGQSSERY 108
           QAMP PR +    S        D S E   GAV Y G+     SERY
Sbjct: 61  QAMPAPRPSPPPGS----AACTDFSGE---GAVIYYGYPGVGFSERY 95

BLAST of PI0007806 vs. NCBI nr
Match: XP_030973483.1 (uncharacterized protein LOC115993677 [Quercus lobata])

HSP 1 Score: 80.9 bits (198), Expect = 7.5e-12
Identity = 47/86 (54.65%), Postives = 61/86 (70.93%), Query Frame = 0

Query: 3   PHSF-SFYYTEGETVQKTGKKAVAPPRPTPPQVYKVDPINFRDVVQKLTAAPEFQDR-RL 62
           PH F S  +T  +T  K  KK VAP  PTPP++YKVDPINFRD+VQKLT A EFQ + RL
Sbjct: 27  PHPFNSSLHTVKKTPTKPWKKPVAPLPPTPPRIYKVDPINFRDLVQKLTGATEFQSKQRL 86

Query: 63  QAMPPPRSNVADQSRRPLVGRLDLSM 87
           Q++ PP  NVA+ S +PL+   ++S+
Sbjct: 87  QSVAPPPLNVAN-STQPLMCNRNISV 111

BLAST of PI0007806 vs. TAIR 10
Match: AT4G37710.1 (VQ motif-containing protein )

HSP 1 Score: 40.8 bits (94), Expect = 8.0e-04
Identity = 24/66 (36.36%), Postives = 39/66 (59.09%), Query Frame = 0

Query: 7  SFYYTEGETVQKTGKKAVAPP-RPTPPQVYKVDPINFRDVVQKLTAAPEFQDRRLQAMPP 66
          S + T  +  +   + A++ P  P  P VY+V+P+NF+ +VQ+LT APE +   +QA P 
Sbjct: 30 SLHSTRKQPSKPLKRPAISSPLNPMHPHVYRVEPVNFKVLVQRLTGAPEHE--TVQAKPL 89

Query: 67 PRSNVA 72
            S+ A
Sbjct: 90 KTSDDA 93

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TW545.2e-4387.04VQ motif-containing protein 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A0A0LPS33.3e-2976.04VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G271490 PE=4 SV=... [more]
A0A6J1D7B42.7e-1554.21VQ motif-containing protein 29 OS=Momordica charantia OX=3673 GN=LOC111017949 PE... [more]
A0A7N2R6U63.6e-1254.65VQ domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
A0A2N9FPV71.2e-1056.34VQ domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20638 PE=4 ... [more]
Match NameE-valueIdentityDescription
KAA0045761.11.1e-4287.04VQ motif-containing protein 29 [Cucumis melo var. makuwa] >TYJ99521.1 VQ motif-c... [more]
KAE8651906.12.4e-3476.85hypothetical protein Csa_006780 [Cucumis sativus][more]
KAG6605217.14.2e-1557.83hypothetical protein SDJN03_02534, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022149539.15.5e-1554.21VQ motif-containing protein 29 [Momordica charantia][more]
XP_030973483.17.5e-1254.65uncharacterized protein LOC115993677 [Quercus lobata][more]
Match NameE-valueIdentityDescription
AT4G37710.18.0e-0436.36VQ motif-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008889VQPFAMPF05678VQcoord: 30..50
e-value: 9.5E-9
score: 34.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..107
NoneNo IPR availablePANTHERPTHR34794:SF1EXPRESSED PROTEINcoord: 17..75
IPR039610VQ motif-containing protein 29PANTHERPTHR34794EXPRESSED PROTEINcoord: 17..75

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0007806.1PI0007806.1mRNA