PI0007782 (gene) Melon (PI 482460) v1

Overview


Name	PI0007782
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	DhaK domain-containing protein
Location	chr11: 14612197 .. 14615066 (-)
RNA-Seq Expression	PI0007782
Synteny	PI0007782

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTTAGGCGTTCAATCTTATTGAGACTAAAGGAAAGACTTAAAGCTAGGCGGCAAGGACAAAGTGTTTGTATGATAACCTCTAAAGAGAGGTGAGCTACGCGACGAAGGTGGCTTAGGCGTTTTAAAGATTAAAGGTTAACTAGGCGAGAAAGGTGTCTTAGACGTTATGAAAGCAAGAGGTTAGTTAGGTGAGAAAAGGGGGCTGAGGTGTGTGAAGTGCTATGCACGCGAGAAGTTTGACATTGACACAAGGCGTTTTGATTATTTATGGGCTTAACAAACTAAGCTTGGTTGATTAGGTATTTTCGGCAAGCCCTAGGCGTTTAGGTGGTCGGTTTAGTGGAAAACCAAGTGTCATTGGCATGCATAATTAAGAATTAAAGTAAGCATGAGGTGGCTTGAGGTTGCAATATTTTTGCATGCAAGGATCTCTATAAATAGGACACTTTAGAAGAGGAATTCTCTCATTCCTCTTGTGCGTTTTGGTTGAAACCATTTTCAGAGTTTCCAAATTGAGTGTAGTTTCTAACTTAGGGCTGCTATTTGATTTTGAGATAAGGAAGGTTGAGTTTAAGTGGAAGGAATAGAGAAAGGTAATTTTTGGAAGAAATCTAAGCAGGGTACACTTTTCAGAGGCTACAGAACGCATCATTTGGAATTCTGAGCTGAAAGTTTGAGGTAAGAAAGTTAAGACATTTCCAAGAAAGTTTTAAGAAGAAAGTTTTTTAATTTGATCATTGGTTTAAAAGTTATTTGCATTTGAAGTTGGAAGTTGAAATCTGGAAATTTACAGAATTTGGATTGGGTTGAAGGGTGGTCGAGTGTCAAAGAAGGTTCTGCACGTGGCTTCAAGGTAAGAGGTTCTCTTATGCGTTCAAAGGTGAGTGACATGGCCAACGCAGGGTAGAGCGTTTGGCTATGTGAGTGGCGAAATGCCAGGCGCGCAGGTCGTGGCGTGTGTGCACGCGAATGTTGCTCATGTGTGTGTGGCATACGTCTGGTGCGTGTGTGAGGTTGTCATTCGACCTAGGCTTGTGATGGGTATAGCGCGCGAGGCTAACACGCAACAAGATCATTTGAGGGCCTGTTCGCGTGCGTGCATGCCTGCTATCCATGCCATGCGGCTAGGTAGTGTCATGACACTAAAAAATGGTTGTTTTGGCATTTTTGAGATTTTTTAGCCATGTTTTGGTATTTTCTGAATTTAAGTGATTAATTTAGATTTAAATTCAATAATTTCAGGTCAAGAGGAAATTGGACAAATTTATCAATCTGGGAGATAAGCGGATATCAGTGAGTGACAAAATAATTTCCAAAATTGTTTTGAACAGTTTTCTTGAGAATTATTATAATATGCTTGAAATGCTTGAATTCTATGTCTTTAAGTAAGTATTACTCAATTGATTTCCAAAGCATGAGAGGCTTAAAAATTATTGAAATATTTGCATGAAGATTGAACTATTAAATTATTTACTGAAGTAAGAGTTGAGTTATGAACTCTTGAACAAAAGATTTGAGCATGTTTTAGTCTATACTTGCATTATTTCAAGTTACATATTGAGAAGACCCTTCGGGGGTATAATATGATTGGTCTGTGCACAGAGGTCCTTTGATGAGGGCATTCAGTAGATGCCTAGTTTTTCCATCACTGTGATTAAGTTTAAGATGAGAGCCTCAATGGACGCCTAGTTTTTTCCATCTCCTAGTAATTAATACAAGATAGGACACTACTGATGTCTAGTGTTTTCATCTTTTATTGTTATGTGAATATGTAAGGTATAGCAAATCAATGATTATTTGAAAGAGAAAGAAAGTTTGTTGAAGAAAGTTTGTTGAAATACTTTATGCTTTATGAAAATGTGTTTATTAAATCAGTTTTACAAAAACCGTCACTCATTAAGCTTTAGCTCATGTTTTCCCAAATGTTTTCCTTCTTTCCAGGTATAGAACGTGGACCCAATGTTCGTGCTTGACTCAAGTTGCCAGTTTTCCAAGTAAATCTCATAGGTGTGATTGATGTCTTTTCCTGTGTTTGTCTGAGCTGTTGGTCAAAAGTTTATCAAATTATGTGAGTTAAAAGAGTCTGTAAATGGTTGAAACTCTTATATTATAAATTTCGAAGTTTTGTATATATTATAAGCTACACTTTCATAATAATAGTATAAATTAAGATCATTTTCCACTATGTACTATAGTAATGGTTAAGTATAAAGGAAGGTCAACAGGTTCTGTACGGGAAGTGCAGTGTCTATTGGCTTCACGCCATCTCTCGAGATTAAGAGTAGGTGGTCTAGGAGGGGATGTGACATCTCAAGTCCATACCGTCAGAAACATTGAACTTAATCAGCTGTTCAGAAGCAAAAATAAAAGTCCAATCAAATATTTATGGTTTTATGCTAGCAACAATTGAATTAAAAGATGAGAATCGTGGTAACTTCTTCCTTTAACTTTAGAGATATTGAAGCACACGAAGAACCAAAGATTTTCCAAGAAGCATTATTCATTAAAGACTTCTCCTACCCAATAGATTTAGCAAGATTGAATCAAGTTTTAAAAGATGAAGAGTTTTGAAGCCTAGTTAGATGTTTTTAAATTCAGATCAGTCAAAACCAGGATTCCCAAGGAATCCATTCACGGATCTTAAAGAGAAGAAAGCAAAGGGAAAGAGGTTCAGAGATTCTTCCTCCTCTTATCAGAGTTCTTCATCCACGATAGAAAATTCAACATTGAAAAATCAGTTTGGTGTGAACACATCAAATGAAGTTGAAGAGCCACAATTAATAAAGAAAGAGAATGAGGTGGTTGCGACCCTTTTAGTTTCCAATGAGAATTCAAGAATGAATTTTTCCAATGAAGAGCAATAG

mRNA sequence

ATGGAGGTTAGGCGTTCAATCTTATTGAGACTAAAGGAAAGACTTAAAGCTAGGCGGCAAGGACAAAGTGTTTGTATGATAACCTCTAAAGAGAGTTGGAAGTTGAAATCTGGAAATTTACAGAATTTGGATTGGGTTGAAGGGTGGTCGAGTGTCAAAGAAGGTTCTGCACGTGGCTTCAAGGTAAGAGGTTCTCTTATGCGTTCAAAGGTCAAGAGGAAATTGGACAAATTTATCAATCTGGGAGATAAGCGGATATCAGTGAGTGACAAAATAATTTCCAAAATTGTTTTGAACAGTTTTCTTGAGAATTATTATAATATGCTTGAAATGCTTGAATTCTATGTCTTTAAGTATAGAACGTGGACCCAATGTTCGTGCTTGACTCAAGTTGCCAGTTTTCCAAATCAGTCAAAACCAGGATTCCCAAGGAATCCATTCACGGATCTTAAAGAGAAGAAAGCAAAGGGAAAGAGGTTCAGAGATTCTTCCTCCTCTTATCAGAGTTCTTCATCCACGATAGAAAATTCAACATTGAAAAATCAGTTTGGTGTGAACACATCAAATGAAGTTGAAGAGCCACAATTAATAAAGAAAGAGAATGAGGTGGTTGCGACCCTTTTAGTTTCCAATGAGAATTCAAGAATGAATTTTTCCAATGAAGAGCAATAG

Coding sequence (CDS)

ATGGAGGTTAGGCGTTCAATCTTATTGAGACTAAAGGAAAGACTTAAAGCTAGGCGGCAAGGACAAAGTGTTTGTATGATAACCTCTAAAGAGAGTTGGAAGTTGAAATCTGGAAATTTACAGAATTTGGATTGGGTTGAAGGGTGGTCGAGTGTCAAAGAAGGTTCTGCACGTGGCTTCAAGGTAAGAGGTTCTCTTATGCGTTCAAAGGTCAAGAGGAAATTGGACAAATTTATCAATCTGGGAGATAAGCGGATATCAGTGAGTGACAAAATAATTTCCAAAATTGTTTTGAACAGTTTTCTTGAGAATTATTATAATATGCTTGAAATGCTTGAATTCTATGTCTTTAAGTATAGAACGTGGACCCAATGTTCGTGCTTGACTCAAGTTGCCAGTTTTCCAAATCAGTCAAAACCAGGATTCCCAAGGAATCCATTCACGGATCTTAAAGAGAAGAAAGCAAAGGGAAAGAGGTTCAGAGATTCTTCCTCCTCTTATCAGAGTTCTTCATCCACGATAGAAAATTCAACATTGAAAAATCAGTTTGGTGTGAACACATCAAATGAAGTTGAAGAGCCACAATTAATAAAGAAAGAGAATGAGGTGGTTGCGACCCTTTTAGTTTCCAATGAGAATTCAAGAATGAATTTTTCCAATGAAGAGCAATAG

Protein sequence

MEVRRSILLRLKERLKARRQGQSVCMITSKESWKLKSGNLQNLDWVEGWSSVKEGSARGFKVRGSLMRSKVKRKLDKFINLGDKRISVSDKIISKIVLNSFLENYYNMLEMLEFYVFKYRTWTQCSCLTQVASFPNQSKPGFPRNPFTDLKEKKAKGKRFRDSSSSYQSSSSTIENSTLKNQFGVNTSNEVEEPQLIKKENEVVATLLVSNENSRMNFSNEEQ

Homology

[Close]

BLAST of PI0007782 vs. ExPASy TrEMBL
Match: A0A5D3BKE0 (DhaK domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00260 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 4.3e-23
Identity = 68/114 (59.65%), Postives = 84/114 (73.68%), Query Frame = 0


Query: 110 EMLEFYVFKYRTWTQCSCLTQVASFPNQSKPGFPRNPFTDLKEKKAKGKRFRDSSSSYQS 169
           +++ F++ K +       +++     +QSKPGF RNPFTDLKEKKAKGK   DSSSS+QS
Sbjct: 134 KVINFFLRKAKNDEGVVKISKFKDTSDQSKPGFARNPFTDLKEKKAKGKMAGDSSSSHQS 193

Query: 170 SSSTIENSTLKNQFGVNTSNEVEEPQLIKKENEVVATLLVSNENSRMNFSNEEQ 224
           SSST ++STLK+Q GVN S E EEP L++KE EV  TL  SNENSRMNFSNEEQ
Sbjct: 194 SSSTAKDSTLKSQSGVNASKEAEEPLLMRKEKEVAVTLSDSNENSRMNFSNEEQ 247

[Close]

BLAST of PI0007782 vs. NCBI nr
Match: TYJ98835.1 (hypothetical protein E5676_scaffold248G00260 [Cucumis melo var. makuwa])

HSP 1 Score: 118.2 bits (295), Expect = 8.8e-23
Identity = 68/114 (59.65%), Postives = 84/114 (73.68%), Query Frame = 0


Query: 110 EMLEFYVFKYRTWTQCSCLTQVASFPNQSKPGFPRNPFTDLKEKKAKGKRFRDSSSSYQS 169
           +++ F++ K +       +++     +QSKPGF RNPFTDLKEKKAKGK   DSSSS+QS
Sbjct: 134 KVINFFLRKAKNDEGVVKISKFKDTSDQSKPGFARNPFTDLKEKKAKGKMAGDSSSSHQS 193

Query: 170 SSSTIENSTLKNQFGVNTSNEVEEPQLIKKENEVVATLLVSNENSRMNFSNEEQ 224
           SSST ++STLK+Q GVN S E EEP L++KE EV  TL  SNENSRMNFSNEEQ
Sbjct: 194 SSSTAKDSTLKSQSGVNASKEAEEPLLMRKEKEVAVTLSDSNENSRMNFSNEEQ 247

The following BLAST results are available for this feature:

BLAST of PI0007782 vs.


Match Name	E-value	Identity	Description

BLAST of PI0007782 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BKE0	4.3e-23	59.65	DhaK domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of PI0007782 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98835.1	8.8e-23	59.65	hypothetical protein E5676_scaffold248G00260 [Cucumis melo var. makuwa]	[more]

BLAST of PI0007782 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0007782.1	PI0007782.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process