PI0007735 (gene) Melon (PI 482460) v1

Overview


Name	PI0007735
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr08: 14101241 .. 14101579 (-)
RNA-Seq Expression	PI0007735
Synteny	PI0007735

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGTATCCAAGAAAACGAGTTGAGGAATCGTTCAGAGCATCAAAAGAATCAAAACACCCGTCTCACCATGAAAGAGACATACAGATTCATTTCTCAGGAATTGCAACCAAAATCCAAAACAAGAGAAACTAACTAAAGAAGAAGATTTCAAGAAGAAGAAAGCAAAAGAAAAACGAAACCCCACCACCCCACCACCGTTCTTTCTCCTTTCTTCTCAGTTCCAAGAAAAACAGAGCAACAGAAGCAAAATGGAAGACAAAGAAGAAGAAGAAGAAATGAAAAGGGGTAATAATGGCGGCGTTAAAACGGCAAATGGAGGTGGAAGAAGAGCTTGA

mRNA sequence

ATGTGGGTATCCAAGAAAACGAATTCATTTCTCAGGAATTGCAACCAAAATCCAAAACAAGAGAAACTAACTAAAGAAGAAGATTTCAAGAAGAAGAAAGCAAAAGAAAAACGAAACCCCACCACCCCACCACCGTTCTTTCTCCTTTCTTCTCAGTTCCAAGAAAAACAGAGCAACAGAAGCAAAATGGAAGACAAAGAAGAAGAAGAAGAAATGAAAAGGGGTAATAATGGCGGCGTTAAAACGGCAAATGGAGGTGGAAGAAGAGCTTGA

Coding sequence (CDS)

ATGTGGGTATCCAAGAAAACGAATTCATTTCTCAGGAATTGCAACCAAAATCCAAAACAAGAGAAACTAACTAAAGAAGAAGATTTCAAGAAGAAGAAAGCAAAAGAAAAACGAAACCCCACCACCCCACCACCGTTCTTTCTCCTTTCTTCTCAGTTCCAAGAAAAACAGAGCAACAGAAGCAAAATGGAAGACAAAGAAGAAGAAGAAGAAATGAAAAGGGGTAATAATGGCGGCGTTAAAACGGCAAATGGAGGTGGAAGAAGAGCTTGA

Protein sequence

MWVSKKTNSFLRNCNQNPKQEKLTKEEDFKKKKAKEKRNPTTPPPFFLLSSQFQEKQSNRSKMEDKEEEEEMKRGNNGGVKTANGGGRRA

Homology

[Close]

BLAST of PI0007735 vs. ExPASy TrEMBL
Match: A0A0A0KYB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G337300 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.6e-11
Identity = 54/93 (58.06%), Postives = 70/93 (75.27%), Query Frame = 0


Query: 5   KKTNSFLRNCNQNPKQEKLT-------KEEDFKKKKAKEKRNPTTPPPFFLLSSQFQEKQ 64
           + T+SF+RNCNQNPKQE+ T       +EE+ K+K+    R+ +     FLLSS  ++KQ
Sbjct: 27  RHTDSFVRNCNQNPKQEEKTNYRRRFEEEEESKRKRKLHHRSFS-----FLLSS--KKKQ 86

Query: 65  SNRSKMEDKEEEEEMKRGNNGGVKTANGGGRRA 91
           SNRSKMED+ EEE+++RGNNGGVKTANGGGRRA
Sbjct: 87  SNRSKMEDR-EEEDIRRGNNGGVKTANGGGRRA 111

[Close]

BLAST of PI0007735 vs. NCBI nr
Match: KGN54473.1 (hypothetical protein Csa_012524 [Cucumis sativus])

HSP 1 Score: 77.8 bits (190), Expect = 5.3e-11
Identity = 54/93 (58.06%), Postives = 70/93 (75.27%), Query Frame = 0


Query: 5   KKTNSFLRNCNQNPKQEKLT-------KEEDFKKKKAKEKRNPTTPPPFFLLSSQFQEKQ 64
           + T+SF+RNCNQNPKQE+ T       +EE+ K+K+    R+ +     FLLSS  ++KQ
Sbjct: 27  RHTDSFVRNCNQNPKQEEKTNYRRRFEEEEESKRKRKLHHRSFS-----FLLSS--KKKQ 86

Query: 65  SNRSKMEDKEEEEEMKRGNNGGVKTANGGGRRA 91
           SNRSKMED+ EEE+++RGNNGGVKTANGGGRRA
Sbjct: 87  SNRSKMEDR-EEEDIRRGNNGGVKTANGGGRRA 111

The following BLAST results are available for this feature:

BLAST of PI0007735 vs.


Match Name	E-value	Identity	Description

BLAST of PI0007735 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYB2	2.6e-11	58.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G337300 PE=4 SV=1	[more]

BLAST of PI0007735 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN54473.1	5.3e-11	58.06	hypothetical protein Csa_012524 [Cucumis sativus]	[more]

BLAST of PI0007735 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 53..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..39

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0007735.1	PI0007735.1	mRNA