PI0007690 (gene) Melon (PI 482460) v1

Overview
NamePI0007690
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr03: 11282519 .. 11282914 (-)
RNA-Seq ExpressionPI0007690
SyntenyPI0007690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATCCAGAATCTCGCCGGAAAACAATTCCGTCGTATCTCTGTTTCTTAAACCCGCCCACATAATTCCCCCGATTCCGATTCCAATTTCGACTGCCGTGGACATGCCGGGGGCGGACCGACAACAGTTTCCAATGAACTTAATGACTGGATCAGAATTGATCATGAAAGTGAGGCCTAAAGGAGAGTCCATGGACGTGGTGGAGGCAGTAACTCCGGAAGCATCGAACTGGGCGGCTCAAATGGCGATGGGGTACAAAACCGGCGGTGGAAAAATGAAATCAGTGGTTCCGAAGAAGAGAAAGCTAGTGAAGAGAATGATGTATGAGTCCATAAAGGATTTTCTCATATCACTCTTTTCGTCCTCCGGCTCCAGCGCCGGAGCACCACCGTGA

mRNA sequence

ATGGGATCCAGAATCTCGCCGGAAAACAATTCCGTCGTATCTCTGTTTCTTAAACCCGCCCACATAATTCCCCCGATTCCGATTCCAATTTCGACTGCCGTGGACATGCCGGGGGCGGACCGACAACAGTTTCCAATGAACTTAATGACTGGATCAGAATTGATCATGAAAGTGAGGCCTAAAGGAGAGTCCATGGACGTGGTGGAGGCAGTAACTCCGGAAGCATCGAACTGGGCGGCTCAAATGGCGATGGGGTACAAAACCGGCGGTGGAAAAATGAAATCAGTGGTTCCGAAGAAGAGAAAGCTAGTGAAGAGAATGATGTATGAGTCCATAAAGGATTTTCTCATATCACTCTTTTCGTCCTCCGGCTCCAGCGCCGGAGCACCACCGTGA

Coding sequence (CDS)

ATGGGATCCAGAATCTCGCCGGAAAACAATTCCGTCGTATCTCTGTTTCTTAAACCCGCCCACATAATTCCCCCGATTCCGATTCCAATTTCGACTGCCGTGGACATGCCGGGGGCGGACCGACAACAGTTTCCAATGAACTTAATGACTGGATCAGAATTGATCATGAAAGTGAGGCCTAAAGGAGAGTCCATGGACGTGGTGGAGGCAGTAACTCCGGAAGCATCGAACTGGGCGGCTCAAATGGCGATGGGGTACAAAACCGGCGGTGGAAAAATGAAATCAGTGGTTCCGAAGAAGAGAAAGCTAGTGAAGAGAATGATGTATGAGTCCATAAAGGATTTTCTCATATCACTCTTTTCGTCCTCCGGCTCCAGCGCCGGAGCACCACCGTGA

Protein sequence

MGSRISPENNSVVSLFLKPAHIIPPIPIPISTAVDMPGADRQQFPMNLMTGSELIMKVRPKGESMDVVEAVTPEASNWAAQMAMGYKTGGGKMKSVVPKKRKLVKRMMYESIKDFLISLFSSSGSSAGAPP
Homology
BLAST of PI0007690 vs. ExPASy TrEMBL
Match: A0A0A0KH01 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G374700 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 8.1e-30
Identity = 74/97 (76.29%), Postives = 82/97 (84.54%), Query Frame = 0

Query: 34  VDMPGADRQQFPMNLMTGSELIMKVRPKGESMDVVEAVTPEASNWAAQMAMGYKTGGGKM 93
           +D+PG   QQFPMNLMTGSEL M+VRP+GESM VVEAVT EAS+   QMAMGYKTGG KM
Sbjct: 1   MDVPGVGGQQFPMNLMTGSELGMRVRPEGESMAVVEAVTVEASDRVVQMAMGYKTGGPKM 60

Query: 94  KSVVPKKRKLVKRMMYESIKDFLISLFSSSGSSAGAP 131
           KSV+P KRKLVKRMMYESIK+F+IS F S GSSA AP
Sbjct: 61  KSVIPMKRKLVKRMMYESIKNFVISRFPSVGSSARAP 97

BLAST of PI0007690 vs. ExPASy TrEMBL
Match: A0A5D3D590 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold481G00190 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.0e-04
Identity = 29/50 (58.00%), Postives = 38/50 (76.00%), Query Frame = 0

Query: 71  VTPEASNWAAQMAMGYKTGGGKMKSVVPKKRKLVKRMMYESIKDFLISLF 121
           V PE +  A + A+ Y+ G G MKSV+PKKRKLVKRMMY+ IK+++ SLF
Sbjct: 12  VVPEKAQTALEPAIVYR-GAGNMKSVIPKKRKLVKRMMYDCIKEWIKSLF 60

BLAST of PI0007690 vs. NCBI nr
Match: KGN47677.1 (hypothetical protein Csa_018325 [Cucumis sativus])

HSP 1 Score: 139.8 bits (351), Expect = 1.7e-29
Identity = 74/97 (76.29%), Postives = 82/97 (84.54%), Query Frame = 0

Query: 34  VDMPGADRQQFPMNLMTGSELIMKVRPKGESMDVVEAVTPEASNWAAQMAMGYKTGGGKM 93
           +D+PG   QQFPMNLMTGSEL M+VRP+GESM VVEAVT EAS+   QMAMGYKTGG KM
Sbjct: 1   MDVPGVGGQQFPMNLMTGSELGMRVRPEGESMAVVEAVTVEASDRVVQMAMGYKTGGPKM 60

Query: 94  KSVVPKKRKLVKRMMYESIKDFLISLFSSSGSSAGAP 131
           KSV+P KRKLVKRMMYESIK+F+IS F S GSSA AP
Sbjct: 61  KSVIPMKRKLVKRMMYESIKNFVISRFPSVGSSARAP 97

BLAST of PI0007690 vs. NCBI nr
Match: KAE8647204.1 (hypothetical protein Csa_019006, partial [Cucumis sativus])

HSP 1 Score: 73.2 bits (178), Expect = 1.9e-09
Identity = 43/70 (61.43%), Postives = 49/70 (70.00%), Query Frame = 0

Query: 65  MDVVEAVTPEASNWAAQMAMGYKTGGGKMKSVVPKKRKLVKRMMYESIKDFLISLFSSSG 124
           +D+VE    EASN A QM MGYK G  KM SV+PK+RKLVK MMY SIK F+IS F  S 
Sbjct: 1   VDMVEGTVAEASNPAVQMTMGYKGGCRKMISVIPKQRKLVKTMMYHSIKCFIISFFRLSF 60

Query: 125 SSA---GAPP 132
           S+A   GAPP
Sbjct: 61  STATGTGAPP 70

BLAST of PI0007690 vs. NCBI nr
Match: KAG6602132.1 (hypothetical protein SDJN03_07365, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 60.1 bits (144), Expect = 1.7e-05
Identity = 46/129 (35.66%), Postives = 63/129 (48.84%), Query Frame = 0

Query: 1   MGSRISPENNSVVSLFLKPAHIIPPIPIPISTAVDMPGADRQQFPMNLMTGSELIMKVRP 60
           M  R+SP++N V+       H  P +       +D P +  +  P N  T    +M  RP
Sbjct: 1   MRFRVSPDHNRVIPDPHPTPHHPPSLNAHHLAPIDPPKSVLRLIPANPETA---VMSTRP 60

Query: 61  ---------KGESMDVVEAVTPEASNWAAQMAMGYKTGGGKMKSVVPKKRKLVKRMMYES 120
                    K +S+  + A T   S      + GY+ G GK KSV+PK+RKLVK MMY  
Sbjct: 61  VIGNKAGDGKAKSVLPLIAETAVTSTGTLTDSHGYRVGIGKGKSVIPKRRKLVKTMMYHC 120

BLAST of PI0007690 vs. NCBI nr
Match: KAG6578934.1 (hypothetical protein SDJN03_23382, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 58.5 bits (140), Expect = 4.9e-05
Identity = 41/102 (40.20%), Postives = 57/102 (55.88%), Query Frame = 0

Query: 30  ISTAVDMPGADRQQFPMNLMTGSELIMKVRPKGESMDVVEAVTPEASNWAAQMAMGYKTG 89
           I TA  +PG   ++FP +++ GS+  + VRP GES         E +N   Q        
Sbjct: 3   IPTAEYIPGVGSEKFPASIIAGSKPAL-VRPIGES-----PAAAELTNRTVQ-------- 62

Query: 90  GGKMKSVVPKKRKLVKRMMYESIKDFLISLFSSSGSSAGAPP 132
               KSV+PKKR+LVK MMY ++K+F+ S+F     SAGAPP
Sbjct: 63  ---KKSVIPKKRRLVKTMMYHAMKNFIKSVFRRK-PSAGAPP 86

BLAST of PI0007690 vs. NCBI nr
Match: KAG6602131.1 (hypothetical protein SDJN03_07364, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 56.6 bits (135), Expect = 1.9e-04
Identity = 30/60 (50.00%), Postives = 42/60 (70.00%), Query Frame = 0

Query: 61  KGESMDVVEAVTPEASNWAAQMAMGYKTGGGKMKSVVPKKRKLVKRMMYESIKDFLISLF 120
           K +S+  +   TPE +  +   ++GY+ G GK+KSV+PKKRKLVK MMY  IK+F+ SLF
Sbjct: 88  KAQSVLPLTPATPETAVTSTN-SLGYRAGVGKVKSVIPKKRKLVKTMMYHCIKNFIKSLF 146

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KH018.1e-3076.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G374700 PE=4 SV=1[more]
A0A5D3D5902.0e-0458.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KGN47677.11.7e-2976.29hypothetical protein Csa_018325 [Cucumis sativus][more]
KAE8647204.11.9e-0961.43hypothetical protein Csa_019006, partial [Cucumis sativus][more]
KAG6602132.11.7e-0535.66hypothetical protein SDJN03_07365, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6578934.14.9e-0540.20hypothetical protein SDJN03_23382, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6602131.11.9e-0450.00hypothetical protein SDJN03_07364, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0007690.1PI0007690.1mRNA