PI0007630 (gene) Melon (PI 482460) v1

Overview


Name	PI0007630
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Ribosomal L28 family
Location	chr06: 30189334 .. 30193391 (+)
RNA-Seq Expression	PI0007630
Synteny	PI0007630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTAATTCCTTTTCTTCCTAAACCCTATTTCACCTTCAGCCAGTCCCATCACTCCCATTACCAGCCACTGCACCCCACCACCACCGCACGACGTTCACCTCTTGCTCTCCACCGCCGCAGTCTTAGCCTCCTGAGGAACTCGTCGTCGCTCCCTCCCTTTCACAATCCATCACATCTTAGAGCAATCAGAGTTACTCGTCTTTGTTTATTTTTGTTCTTTCTTCTCTCAAATATTTGAAATCCTTCGAGGGTCCCGAAGAGGGCTAAGGTAACATATCTGAAATTCCGATCAATTTTGCACCTGCATTCTCTTAATACACCATTCCTCTAATCAGAATTTCAGACTATTGTTTCTTGCTTCATTACTTTGTTATTGTGATTAGTTGGAACCAAAATAGATTCTTAGAAGCTTGTTGGCCATAATTCAAGCTCCTTGTCGCAGATCGTTCTACTTCTGTTCCTATTTTTAGGATTACGGTTGATTCTACAAGAGAGAGAGTCCATAATGGCCTTTAGAGGAAAAGAAATGATGAAGAAGATACTGAAGAAAGTTGGAGAGAACAATTTGGCGCCTGGAGTGAAGGATTCATTGAAGAAATATATTCCGGACAGCAAAATAGTGATGGGTAGAGCAAACCGCGGTATTTATGCTGGCCGTCACATACGATTCGGCAACCGTGTCAGTGAAGATGGTGGTAACAAGTATGAACCTCTTGTATACCCTTTATTTTTCTTAGAATCATTGGTCGATATTTCTCTCTGAATATGAGTTAAGACATCAATCATTTTACTTATTTGCCGAAGTCTATGGTGTTAGACCCGTAGAATATGAGTTAAGGCATCAACGTCTACTTCTTCTTTCTTTGGGGTGTTGCATATTCAAATTTCCACGCCCTCACTGTACTGAAAAAGAGTGAGAGCTCATTGGTAGTATGAAATTACAAAAAGGGAAGACCTCATGAGATGATTACAAAAGATGTCTCCAATTGAAAAGGAGGGAGGAATAGCCATAGGGATGGAAGAGGGGAGTATTTACACTAAAAAACTAGCATGTTAACTATAGCTTAAAAATCTGTGATAGGGTAGTTCTTTCTCTTTGAAGATCCAATTATTTCTTTCTTGTCAATTGATCCATCAGAAGGCTCTTATGAAATCTCCCTTTTAATTTATTATTCTTTTTCTCTTAGTACCTTTTAGTTGGAGATGTCTTTTGTAAATCTCCCTAATGGGGTCTGATCTTTTATGATTTCACACCGTTGATGAAATTGTTTCTTATCCAAAACAAAAAATCATGGCACGTGAAGGTACCCCAAATAGAATCCTTGCATACGTGCTTTTGATTTTTGATTTTCAAGTAAGAGAAGATTGTTGTTTATAAGTTTTGCTGAAGAAGTTATTTGATAGGACTTGGCCATCAATTTTATTTATCAACATGTATCAAGGGAAGTTTTGACTTTGAGAGCATCCTGTCTCTCCCAATTCTCGTCGGAGAACCACAACAAAATCACAGCCATAAAGATCCCCTATGGAACAACACTCCCCTCTATGACAGCCTCCTCCCTCTACCCATTACCCATCATATTCCCTTTTTCTTCCTCGCATGCCTGCTCATAAACTGTAGTGATTTGGGGCTTATCATTATTGAATTTATTGTTTTTCTGCTCTCCTTCACTTTGTAAGAATAGCCATGCTTGCCTTTAAAAGCAATGTTCATAGATTGCTGGATCACTGACCATAACTGGAATTGGGTATTCATCAATGTAAGTTTGAGATAACGAATTGTCATCTCAGCGGTCTAAGGGGAATTTTATCTGTTCTTTTTGTGCCTCATCTTGATGAATGTTTGGATTTGGATGCGGGATAAGCTCAAGTTTATTGTACTTCTGGAACTCTTAAACACACTGCTTGATTAGGAATTATAGATCTAGAATCAAGTGGAGATTTTATTTTAATCATATAATGCGTTTTTCTGCGAGGTGTTTATGTCCTGCTTCTATACTAATCTATATATACGTGGAAGATCCCTTAGGAAAGATGATTAGGGCATGAGCTAGGATTTAGTGTATAGGTTTGGCTTACTAAGGCGACCTTTAATTTGGCAACCGAAGTTCAATTGGGGAAACCAACCGGCTTGAACAATGGCCTACCGTCACAATTTTCAATCCAAGCTTTCTAGACTTGTTTGTCTCCAAACACAGAACCTGTGACCCAGACGACCCATTAGATTTTAAGAAGAGAAAATGAACTTAAGGTTGTGTTACCTTCTAAAGCTTCGTAATTAGCTATTGGTAGTGGAGCTTCAGCATTAGTTTGCAAGCTCTCACCGTCAATGTTTTAAAAAGCTATTGAGGCTTACGACTTGAGGCTCGCCTCAAGGCAAGGCTCTAAGTCTTAGCCTTGAGACATACGCCTTGTTGAACCATAAGAGGTGTACGCCTCTCATAAATGAGGGTTACACCTTTGCGAAAACGCATTGTGGCTTAAAATCTCTATGCCTCGCCTAGTGACTAGAAAAATAATAGTGATATTAAGGTTTGAGCTATGACAATTTGAACTAGGACTATTTTGACATCTTCATCATCATTAATACTGCTATTATTATTAGTGATGATGAAGATGTCCTTTTAGAATTTTTTATTAAGTGAAAATTGTGGAGGTGAAGTTTCTTTTTTACACATTTTATATAACTATCATGTTTAGCAATTTGATCATACCAATTTAGGTTTTGTTGTATTTAATTCATTATTTGAGGCGTACGCCTTCTATCGCCTTGAGGCTTACAGCTCGCCTCTTGGAGAGGAAAAGCCTCAAGGCCACCTTTAGCCTTTTAAAACATTGCTCACCGTCCTTCCAATTTTCGAATCAATTATTAGATTAGTTCTTTGCTCTTTTCATTTCTTCTTTTTCATTATATTCATGAGACGTTTCCTGTTTAATAAAATTCGGTTTCCTTTTGCATGCCATTGGTTTTTGTTGTATTTTTGTAGCCTCTTATTTACATTTCTAGGGTATGCCTCTCTCTCTTGTATTCTGATATTTGAGGCACGATATTATACTTTTGTGTTCTTCCTTTGTATTGGCTTTATGTCATATATTAAGAGTTAGGTGCCTTTTATTAGTTCTTTTGCTCACAGACATTCATATTGACATATGATCGTATACCCTTCCTCTTGTATTTCTCTCTAATGTTTCTTGTTTTTGGAGCGTTAGACTCTTCTCGTTACATCAATAAAAGGTTAATGTTTTTGTTTTTCTAAAAAGGGAAACCTTCATATGACATGTGATCTTATACTGTTTCATATTGTCATGCAATCATTTTTTTTCAATTTTGGAGTATTTAGCCTTTATGTGCTGGTGCTTATAGGTCAAGGAGGAAATGGAAACCAAACGTCCAAGAGAAGCGACTTTTCAGCTATATTCTAGACCGCCATATTCGAGTTAAAATTACCACTCATGCCCTTCGATGCATCGACAAGGCTGGTGGGATCGATGAGTACCTGCTGAAAACTCCGTACCACAAAATGGACACTGAACTGGGGCTGTTTTGGAAGTCAAAGATTGAGACACTGTATGAAGAACTCGGGAAGATGGAGGTTGCTTTCTTCTTGCCAGAGGACGAAGCTAAATTTGAACAACGCTTTAAAGAAATGAAATTATCTGAGAGGGCAGCACGAAAGGAGGCAAGAAGACAGATGTATGGCAGTTCGACTAAACTCGATCAGATCAAAGAGGGCCAAGAAGATCGTAATGGATCTAATGAGGAAGCTGCAAGTTCTGAAGGAGGTTCCCATGATGATGATAGTCATCAGCAGCGGGTTGCCAGTGTCTAATTATTTACTGGAGACGTTTTCTTCTTCTCAACTTGGGAGTTCAAGCTTTGACTTCTTATTCTCTCTTTCCAAAGATTTGTTTCTTCATTTTTCACTATAACCCTTTTGTAGCTTATATTTGTATTTTGTTTAAGATATACAGTTAGAAATGAGAATTGTTTTTGGAAATTGAGATGTGAAATCTTAAAACTTTTTGTTCAATAAGATTAGCCATAGGCTTTGAGATTT

mRNA sequence

CCTAATTCCTTTTCTTCCTAAACCCTATTTCACCTTCAGCCAGTCCCATCACTCCCATTACCAGCCACTGCACCCCACCACCACCGCACGACGTTCACCTCTTGCTCTCCACCGCCGCAGTCTTAGCCTCCTGAGGAACTCGTCGTCGCTCCCTCCCTTTCACAATCCATCACATCTTAGAGCAATCAGAGTTACTCGTCTTTGTTTATTTTTGTTCTTTCTTCTCTCAAATATTTGAAATCCTTCGAGGGTCCCGAAGAGGGCTAAGATCGTTCTACTTCTGTTCCTATTTTTAGGATTACGGTTGATTCTACAAGAGAGAGAGTCCATAATGGCCTTTAGAGGAAAAGAAATGATGAAGAAGATACTGAAGAAAGTTGGAGAGAACAATTTGGCGCCTGGAGTGAAGGATTCATTGAAGAAATATATTCCGGACAGCAAAATAGTGATGGGTAGAGCAAACCGCGGTATTTATGCTGGCCGTCACATACGATTCGGCAACCGTGTCAGTGAAGATGGTGGTAACAAGTCAAGGAGGAAATGGAAACCAAACGTCCAAGAGAAGCGACTTTTCAGCTATATTCTAGACCGCCATATTCGAGTTAAAATTACCACTCATGCCCTTCGATGCATCGACAAGGCTGGTGGGATCGATGAGTACCTGCTGAAAACTCCGTACCACAAAATGGACACTGAACTGGGGCTGTTTTGGAAGTCAAAGATTGAGACACTGTATGAAGAACTCGGGAAGATGGAGGTTGCTTTCTTCTTGCCAGAGGACGAAGCTAAATTTGAACAACGCTTTAAAGAAATGAAATTATCTGAGAGGGCAGCACGAAAGGAGGCAAGAAGACAGATGTATGGCAGTTCGACTAAACTCGATCAGATCAAAGAGGGCCAAGAAGATCGTAATGGATCTAATGAGGAAGCTGCAAGTTCTGAAGGAGGTTCCCATGATGATGATAGTCATCAGCAGCGGGTTGCCAGTGTCTAATTATTTACTGGAGACGTTTTCTTCTTCTCAACTTGGGAGTTCAAGCTTTGACTTCTTATTCTCTCTTTCCAAAGATTTGTTTCTTCATTTTTCACTATAACCCTTTTGTAGCTTATATTTGTATTTTGTTTAAGATATACAGTTAGAAATGAGAATTGTTTTTGGAAATTGAGATGTGAAATCTTAAAACTTTTTGTTCAATAAGATTAGCCATAGGCTTTGAGATTT

Coding sequence (CDS)

ATGGCCTTTAGAGGAAAAGAAATGATGAAGAAGATACTGAAGAAAGTTGGAGAGAACAATTTGGCGCCTGGAGTGAAGGATTCATTGAAGAAATATATTCCGGACAGCAAAATAGTGATGGGTAGAGCAAACCGCGGTATTTATGCTGGCCGTCACATACGATTCGGCAACCGTGTCAGTGAAGATGGTGGTAACAAGTCAAGGAGGAAATGGAAACCAAACGTCCAAGAGAAGCGACTTTTCAGCTATATTCTAGACCGCCATATTCGAGTTAAAATTACCACTCATGCCCTTCGATGCATCGACAAGGCTGGTGGGATCGATGAGTACCTGCTGAAAACTCCGTACCACAAAATGGACACTGAACTGGGGCTGTTTTGGAAGTCAAAGATTGAGACACTGTATGAAGAACTCGGGAAGATGGAGGTTGCTTTCTTCTTGCCAGAGGACGAAGCTAAATTTGAACAACGCTTTAAAGAAATGAAATTATCTGAGAGGGCAGCACGAAAGGAGGCAAGAAGACAGATGTATGGCAGTTCGACTAAACTCGATCAGATCAAAGAGGGCCAAGAAGATCGTAATGGATCTAATGAGGAAGCTGCAAGTTCTGAAGGAGGTTCCCATGATGATGATAGTCATCAGCAGCGGGTTGCCAGTGTCTAA

Protein sequence

MAFRGKEMMKKILKKVGENNLAPGVKDSLKKYIPDSKIVMGRANRGIYAGRHIRFGNRVSEDGGNKSRRKWKPNVQEKRLFSYILDRHIRVKITTHALRCIDKAGGIDEYLLKTPYHKMDTELGLFWKSKIETLYEELGKMEVAFFLPEDEAKFEQRFKEMKLSERAARKEARRQMYGSSTKLDQIKEGQEDRNGSNEEAASSEGGSHDDDSHQQRVASV

Homology

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BLAST of PI0007630 vs. ExPASy Swiss-Prot
Match: P36525 (54S ribosomal protein L24, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MRPL24 PE=1 SV=2)

HSP 1 Score: 75.9 bits (185), Expect = 6.5e-13
Identity = 44/110 (40.00%), Postives = 64/110 (58.18%), Query Frame = 0


Query: 30  KKYIPDSKI----VMGRANRGIYAGRHIRFGNRVSEDGGNKSRRKWKPNVQEKRLFSYIL 89
           +K  PD K     +  ++N+G+Y G  ++FGN +SE    K+R+KW PNV +K L+S  L
Sbjct: 52  RKKFPDYKYGESNIFKQSNKGLYGGSFVQFGNNISESKA-KTRKKWLPNVVKKGLWSETL 111

Query: 90  DRHIRVKITTHALRCIDKAGGIDEYLLKTPYHKMDTELG-LFWKSKIETL 135
           +R I +K+T   L+ I K GGID YL K    ++  ELG   WK +   L
Sbjct: 112 NRKISIKMTAKVLKTISKEGGIDNYLTKEKSARI-KELGPTGWKLRYRVL 159

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BLAST of PI0007630 vs. ExPASy Swiss-Prot
Match: A0L5U1 (50S ribosomal protein L28 OS=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) OX=156889 GN=rpmB PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.0e-09
Identity = 32/71 (45.07%), Postives = 46/71 (64.79%), Query Frame = 0


Query: 43  ANRGIYAGRHIRFGNRVSEDGGNKSRRKWKPNVQEKRLFSYILDRHIRVKITTHALRCID 102
           A +    G+  + GN+VS     K+RR+W PN+Q K L+S  L + ++V I+T ALR +D
Sbjct: 2   ARKRTLGGKAPQAGNKVSH-SQRKTRRQWMPNIQTKALWSITLGQSVKVTISTSALRSVD 61

Query: 103 KAGGIDEYLLK 114
            AGG+D YLLK
Sbjct: 62  NAGGLDNYLLK 71

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BLAST of PI0007630 vs. ExPASy Swiss-Prot
Match: A9HS05 (50S ribosomal protein L28 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / CCUG 37298 / CIP 103539 / LMG 7603 / PAl5) OX=272568 GN=rpmB PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.6e-09
Identity = 31/73 (42.47%), Postives = 48/73 (65.75%), Query Frame = 0


Query: 50  GRHIRFGNRVSEDGGNKSRRKWKPNVQEKRLFSYILDRHIRVKITTHALRCIDKAGGIDE 109
           G+ +  GN VS    NKSRR++ PN+QE  L S IL   +R++++T+ +R ++  GG+D 
Sbjct: 9   GKGVLTGNNVSH-ANNKSRRRFLPNLQETSLLSDILGSAVRLRLSTNGIRTVEHNGGLDA 68

Query: 110 YLLKTPYHKMDTE 123
           +LL TP  K+ TE
Sbjct: 69  FLLSTPNRKLPTE 80

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BLAST of PI0007630 vs. ExPASy Swiss-Prot
Match: Q5FUP5 (50S ribosomal protein L28 OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=rpmB PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.4e-09
Identity = 31/73 (42.47%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 50  GRHIRFGNRVSEDGGNKSRRKWKPNVQEKRLFSYILDRHIRVKITTHALRCIDKAGGIDE 109
           G+ +  GN VS    NKSRR++ PN+QE  L S IL   +R++++T  +R ++  GG+D 
Sbjct: 9   GKGVLTGNNVSH-ANNKSRRRFLPNLQETTLISDILGASVRMRLSTDGIRTVEHNGGLDS 68

Query: 110 YLLKTPYHKMDTE 123
           +LL TP  K+ TE
Sbjct: 69  FLLGTPNRKLPTE 80

[Close]

BLAST of PI0007630 vs. ExPASy Swiss-Prot
Match: O60091 (54S ribosomal protein L24, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mrpl24 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.2e-08
Identity = 50/167 (29.94%), Postives = 82/167 (49.10%), Query Frame = 0


Query: 8   MMKKILKKVGENNLAPGVKDSLKKYIPDSKIVMGRANRGIYAGRHIRFGNRVSEDGGNKS 67
           M  K+L+K+      P +    K Y P SK       + +Y G     GN      G+K+
Sbjct: 1   MASKLLRKLA----YPTLPVKGKIYDPFSKF-----QQNLYGGSKTEAGNNKIPKFGHKT 60

Query: 68  RRKWKPNVQEKRLFSYILDRHIRVKITTHALRCIDKAGGIDEYLLKTPYHKMDTELGLFW 127
           RR W PN   K L+S +L+    + +T+  LR IDK GG+DEYL+K+   ++ + LGL  
Sbjct: 61  RRVWIPNGHSKWLYSNVLEEKFHLYVTSRVLRTIDKEGGLDEYLVKSTPSRLKS-LGLRG 120

Query: 128 KSKIETLYEELG-KMEVAFFLPED---EAKFEQRFKEMKLSERAARK 171
                 +  +LG K  +   LP D   + ++ ++ K++ L    ++K
Sbjct: 121 VELRALVLHKLGAKNPILEKLPSDSGAQKRYLEKVKDVVLKLNRSKK 157

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BLAST of PI0007630 vs. ExPASy TrEMBL
Match: A0A0A0L1P8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G005030 PE=3 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.3e-104
Identity = 203/221 (91.86%), Postives = 209/221 (94.57%), Query Frame = 0


Query: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKYIPDSKIVMGRANRGIYAGRHIRFGNRVS 60
           MAFRGKEMMKKILKKVGENNLAPGVKDSLKK IPDSKIVMGRANRGIYAGRHIRFGNRVS
Sbjct: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMGRANRGIYAGRHIRFGNRVS 60

Query: 61  EDGGNKSRRKWKPNVQEKRLFSYILDRHIRVKITTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRR WKPNVQEKRLFSYILDRHIRVK+TTHALRCIDKAGGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 121 TELGLFWKSKIETLYEELGKMEVAFFLPEDEAKFEQRFKEMKLSERAARKEARRQMYGSS 180
           TELGLFWKSKIETLYEELGKMEV FF PEDE KFEQRFKE+KLSERAAR+EARRQMYGSS
Sbjct: 121 TELGLFWKSKIETLYEELGKMEVVFFSPEDEVKFEQRFKELKLSERAARREARRQMYGSS 180

Query: 181 TKLDQIKEGQEDRNGSNEE-AASSEGGSHDDDSHQQRVASV 221
            KL+QIKEG E  NGS+EE AASSEGGSH DDSHQQ VA+V
Sbjct: 181 AKLNQIKEGGEKGNGSSEEAAASSEGGSHGDDSHQQWVANV 221

[Close]

BLAST of PI0007630 vs. ExPASy TrEMBL
Match: A0A1S3BK21 (54S ribosomal protein L24, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103490718 PE=3 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.2e-103
Identity = 201/222 (90.54%), Postives = 213/222 (95.95%), Query Frame = 0


Query: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKYIPDSKIVMGRANRGIYAGRHIRFGNRVS 60
           MAFRGKEMMKKILKKVGENNLAPGVK+SLKK++PDSKIVMGRANRGIYAGRHIRFGNRVS
Sbjct: 1   MAFRGKEMMKKILKKVGENNLAPGVKESLKKWVPDSKIVMGRANRGIYAGRHIRFGNRVS 60

Query: 61  EDGGNKSRRKWKPNVQEKRLFSYILDRHIRVKITTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRRKWKPNVQEKRLFSYILDRHIRVK+TTHALRCIDKAGGIDEYLLKTPY KMD
Sbjct: 61  EDGGNKSRRKWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYQKMD 120

Query: 121 TELGLFWKSKIETLYEELGKMEVAFFLPEDEAKFEQRFKEMKLSERAARKEARRQMYGSS 180
           TELGLFWK+KIETLYEELGKMEV FF PEDEAKFEQRFK++KLSERAARKEARR++YGSS
Sbjct: 121 TELGLFWKAKIETLYEELGKMEVVFFSPEDEAKFEQRFKDLKLSERAARKEARRKIYGSS 180

Query: 181 T-KLDQIKEGQEDRNGSNEEAASSEGGSH-DDDSHQQRVASV 221
           T KL+QIKEG ED N S+EEAASSEGGSH DDDSHQQ VA+V
Sbjct: 181 TNKLNQIKEGGEDTNVSSEEAASSEGGSHGDDDSHQQWVANV 222

[Close]

BLAST of PI0007630 vs. ExPASy TrEMBL
Match: A0A6J1E6M9 (uncharacterized protein LOC111431195 OS=Cucurbita moschata OX=3662 GN=LOC111431195 PE=3 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 8.9e-98
Identity = 187/219 (85.39%), Postives = 202/219 (92.24%), Query Frame = 0


Query: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKYIPDSKIVMGRANRGIYAGRHIRFGNRVS 60
           MAFRGKEMMKKILKKVGENNLAPGVKDSLKK IPDSKIVM RA RGI+AGRHI+FGNR+S
Sbjct: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMNRAKRGIFAGRHIQFGNRIS 60

Query: 61  EDGGNKSRRKWKPNVQEKRLFSYILDRHIRVKITTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRR WKPNVQEKRLFSYILDRHIRVK+TTHALRCIDKAGGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 121 TELGLFWKSKIETLYEELGKMEVAFFLPEDEAKFEQRFKEMKLSERAARKEARRQMYGSS 180
           TE+GLFWK+KIE LYEELG+MEV FF PEDEAKFEQ F+++KLSERAARKEARR+MYGSS
Sbjct: 121 TEIGLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGFRDLKLSERAARKEARRRMYGSS 180

Query: 181 TKLDQIKEGQEDRNGSNEEAASSEGGSHDDDSHQQRVAS 220
           T+ DQI+EGQ DR GS+EE A SEGGSH DD  QQ VA+
Sbjct: 181 TQHDQIEEGQADRAGSSEEVAGSEGGSHGDDGPQQCVAN 219

[Close]

BLAST of PI0007630 vs. ExPASy TrEMBL
Match: A0A6J1HLI0 (uncharacterized protein LOC111465250 OS=Cucurbita maxima OX=3661 GN=LOC111465250 PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 6.4e-96
Identity = 182/211 (86.26%), Postives = 196/211 (92.89%), Query Frame = 0


Query: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKYIPDSKIVMGRANRGIYAGRHIRFGNRVS 60
           MAFRGKEMMKKILKKVGENNLAPGVKDSLKK IPDSK+VM RA RGI+AGRHI+FGNRVS
Sbjct: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKVVMNRAKRGIFAGRHIQFGNRVS 60

Query: 61  EDGGNKSRRKWKPNVQEKRLFSYILDRHIRVKITTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRR WKPNVQEKRLFSYILDRHIRVK+TTHALRCIDKAGGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRSWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 121 TELGLFWKSKIETLYEELGKMEVAFFLPEDEAKFEQRFKEMKLSERAARKEARRQMYGSS 180
           TE+GLFWK+KIE LYEELG+MEV FF PEDEAKFEQ F+++KLSERAARKE RR+MYGSS
Sbjct: 121 TEIGLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGFRDLKLSERAARKETRRRMYGSS 180

Query: 181 TKLDQIKEGQEDRNGSNEEAASSEGGSHDDD 212
           T+ DQI+EGQ DR GS+EE A SEGGSH DD
Sbjct: 181 TQRDQIEEGQADRVGSSEEVAGSEGGSHGDD 211

[Close]

BLAST of PI0007630 vs. ExPASy TrEMBL
Match: A0A6J1CUG4 (uncharacterized protein LOC111014872 OS=Momordica charantia OX=3673 GN=LOC111014872 PE=3 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.3e-92
Identity = 179/220 (81.36%), Postives = 198/220 (90.00%), Query Frame = 0


Query: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKYIPDSKIVMGRANRGIYAGRHIRFGNRVS 60
           MAFRGKEMMKK+LKKVGE NLAPGVK+SLKK IPDSK+VM RA RGI+AGRHI+FGNRVS
Sbjct: 1   MAFRGKEMMKKVLKKVGEINLAPGVKESLKKCIPDSKVVMNRAKRGIFAGRHIQFGNRVS 60

Query: 61  EDGGNKSRRKWKPNVQEKRLFSYILDRHIRVKITTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRR WKPNVQEKRLFSYILDRHIRVK+TTHALRCIDK GGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRTWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKVGGIDEYLLKTPYHKMD 120

Query: 121 TELGLFWKSKIETLYEELGKMEVAFFLPEDEAKFEQRFKEMKLSERAARKEARRQMYGSS 180
           TE+GLFWK+KI  LYEELG+MEV FF PEDEAKFEQ F+E+KL+ERAARKEARRQ YGSS
Sbjct: 121 TEIGLFWKAKITKLYEELGQMEVVFFSPEDEAKFEQGFRELKLAERAARKEARRQTYGSS 180

Query: 181 TKLDQIKEGQEDRNGSNEEAA-SSEGGSHDDDSHQQRVAS 220
           +  DQI+EG+ DR+G+ +EAA  SEGGSH DD  QQ VA+
Sbjct: 181 SNHDQIEEGRADRHGTGKEAADGSEGGSHGDDGSQQWVAN 220

[Close]

BLAST of PI0007630 vs. NCBI nr
Match: XP_004146126.1 (54S ribosomal protein L24, mitochondrial [Cucumis sativus] >KGN55688.1 hypothetical protein Csa_010295 [Cucumis sativus])

HSP 1 Score: 389.0 bits (998), Expect = 2.6e-104
Identity = 203/221 (91.86%), Postives = 209/221 (94.57%), Query Frame = 0


Query: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKYIPDSKIVMGRANRGIYAGRHIRFGNRVS 60
           MAFRGKEMMKKILKKVGENNLAPGVKDSLKK IPDSKIVMGRANRGIYAGRHIRFGNRVS
Sbjct: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMGRANRGIYAGRHIRFGNRVS 60

Query: 61  EDGGNKSRRKWKPNVQEKRLFSYILDRHIRVKITTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRR WKPNVQEKRLFSYILDRHIRVK+TTHALRCIDKAGGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 121 TELGLFWKSKIETLYEELGKMEVAFFLPEDEAKFEQRFKEMKLSERAARKEARRQMYGSS 180
           TELGLFWKSKIETLYEELGKMEV FF PEDE KFEQRFKE+KLSERAAR+EARRQMYGSS
Sbjct: 121 TELGLFWKSKIETLYEELGKMEVVFFSPEDEVKFEQRFKELKLSERAARREARRQMYGSS 180

Query: 181 TKLDQIKEGQEDRNGSNEE-AASSEGGSHDDDSHQQRVASV 221
            KL+QIKEG E  NGS+EE AASSEGGSH DDSHQQ VA+V
Sbjct: 181 AKLNQIKEGGEKGNGSSEEAAASSEGGSHGDDSHQQWVANV 221

[Close]

BLAST of PI0007630 vs. NCBI nr
Match: XP_038876561.1 (uncharacterized protein LOC120068991 [Benincasa hispida])

HSP 1 Score: 386.0 bits (990), Expect = 2.2e-103
Identity = 196/219 (89.50%), Postives = 208/219 (94.98%), Query Frame = 0


Query: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKYIPDSKIVMGRANRGIYAGRHIRFGNRVS 60
           MAFRGKEMMKKILKKVGE NLAPGVKDSLKK IPDSKIVM RANRGIYAGRHIRFGNRVS
Sbjct: 1   MAFRGKEMMKKILKKVGEKNLAPGVKDSLKKCIPDSKIVMNRANRGIYAGRHIRFGNRVS 60

Query: 61  EDGGNKSRRKWKPNVQEKRLFSYILDRHIRVKITTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRR WKPNVQEKRLFSYILDRHIRVK+TTHALRCIDKAGGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRSWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 121 TELGLFWKSKIETLYEELGKMEVAFFLPEDEAKFEQRFKEMKLSERAARKEARRQMYGSS 180
           TE+GLFWK+KIE +YEELG+MEV FF PEDEAKFEQ F+E+KL+ERAARKEARRQMYGSS
Sbjct: 121 TEIGLFWKTKIEKMYEELGQMEVVFFSPEDEAKFEQGFRELKLTERAARKEARRQMYGSS 180

Query: 181 TKLDQIKEGQEDRNGSNEEAASSEGGSHDDDSHQQRVAS 220
           TK DQIKEGQEDR+GS+EEAASSEGGSH DD HQQ+VA+
Sbjct: 181 TKHDQIKEGQEDRHGSSEEAASSEGGSHGDDGHQQKVAN 219

[Close]

BLAST of PI0007630 vs. NCBI nr
Match: XP_008448584.1 (PREDICTED: 54S ribosomal protein L24, mitochondrial [Cucumis melo] >XP_008448585.1 PREDICTED: 54S ribosomal protein L24, mitochondrial [Cucumis melo] >XP_008448586.1 PREDICTED: 54S ribosomal protein L24, mitochondrial [Cucumis melo] >XP_008448587.1 PREDICTED: 54S ribosomal protein L24, mitochondrial [Cucumis melo] >XP_008448588.1 PREDICTED: 54S ribosomal protein L24, mitochondrial [Cucumis melo])

HSP 1 Score: 384.4 bits (986), Expect = 6.5e-103
Identity = 201/222 (90.54%), Postives = 213/222 (95.95%), Query Frame = 0


Query: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKYIPDSKIVMGRANRGIYAGRHIRFGNRVS 60
           MAFRGKEMMKKILKKVGENNLAPGVK+SLKK++PDSKIVMGRANRGIYAGRHIRFGNRVS
Sbjct: 1   MAFRGKEMMKKILKKVGENNLAPGVKESLKKWVPDSKIVMGRANRGIYAGRHIRFGNRVS 60

Query: 61  EDGGNKSRRKWKPNVQEKRLFSYILDRHIRVKITTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRRKWKPNVQEKRLFSYILDRHIRVK+TTHALRCIDKAGGIDEYLLKTPY KMD
Sbjct: 61  EDGGNKSRRKWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYQKMD 120

Query: 121 TELGLFWKSKIETLYEELGKMEVAFFLPEDEAKFEQRFKEMKLSERAARKEARRQMYGSS 180
           TELGLFWK+KIETLYEELGKMEV FF PEDEAKFEQRFK++KLSERAARKEARR++YGSS
Sbjct: 121 TELGLFWKAKIETLYEELGKMEVVFFSPEDEAKFEQRFKDLKLSERAARKEARRKIYGSS 180

Query: 181 T-KLDQIKEGQEDRNGSNEEAASSEGGSH-DDDSHQQRVASV 221
           T KL+QIKEG ED N S+EEAASSEGGSH DDDSHQQ VA+V
Sbjct: 181 TNKLNQIKEGGEDTNVSSEEAASSEGGSHGDDDSHQQWVANV 222

[Close]

BLAST of PI0007630 vs. NCBI nr
Match: XP_022923524.1 (uncharacterized protein LOC111431195 [Cucurbita moschata])

HSP 1 Score: 366.3 bits (939), Expect = 1.8e-97
Identity = 187/219 (85.39%), Postives = 202/219 (92.24%), Query Frame = 0


Query: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKYIPDSKIVMGRANRGIYAGRHIRFGNRVS 60
           MAFRGKEMMKKILKKVGENNLAPGVKDSLKK IPDSKIVM RA RGI+AGRHI+FGNR+S
Sbjct: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMNRAKRGIFAGRHIQFGNRIS 60

Query: 61  EDGGNKSRRKWKPNVQEKRLFSYILDRHIRVKITTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRR WKPNVQEKRLFSYILDRHIRVK+TTHALRCIDKAGGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 121 TELGLFWKSKIETLYEELGKMEVAFFLPEDEAKFEQRFKEMKLSERAARKEARRQMYGSS 180
           TE+GLFWK+KIE LYEELG+MEV FF PEDEAKFEQ F+++KLSERAARKEARR+MYGSS
Sbjct: 121 TEIGLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGFRDLKLSERAARKEARRRMYGSS 180

Query: 181 TKLDQIKEGQEDRNGSNEEAASSEGGSHDDDSHQQRVAS 220
           T+ DQI+EGQ DR GS+EE A SEGGSH DD  QQ VA+
Sbjct: 181 TQHDQIEEGQADRAGSSEEVAGSEGGSHGDDGPQQCVAN 219

[Close]

BLAST of PI0007630 vs. NCBI nr
Match: KAG6577758.1 (hypothetical protein SDJN03_25332, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 364.0 bits (933), Expect = 9.1e-97
Identity = 186/219 (84.93%), Postives = 201/219 (91.78%), Query Frame = 0


Query: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKYIPDSKIVMGRANRGIYAGRHIRFGNRVS 60
           MAFRGKEMMKKILKKVGENNLAPGVKDSLKK IPDSKIVM RA RGI+AGRHI+FGNR+S
Sbjct: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKCIPDSKIVMNRAKRGIFAGRHIQFGNRIS 60

Query: 61  EDGGNKSRRKWKPNVQEKRLFSYILDRHIRVKITTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRR WKPNVQEKRLFSYILDRHIRVK+TTHALRCIDKAGGIDEYLLKTPYHKMD
Sbjct: 61  EDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 121 TELGLFWKSKIETLYEELGKMEVAFFLPEDEAKFEQRFKEMKLSERAARKEARRQMYGSS 180
           TE+GLFWK+KIE LYEELG+MEV FF PEDEAKFEQ F+++KLSERAARKEARR+MYGS 
Sbjct: 121 TEIGLFWKAKIEKLYEELGQMEVVFFSPEDEAKFEQGFRDLKLSERAARKEARRRMYGSL 180

Query: 181 TKLDQIKEGQEDRNGSNEEAASSEGGSHDDDSHQQRVAS 220
           T+ DQI+EGQ DR GS+EE A SEGGSH DD  QQ VA+
Sbjct: 181 TQHDQIEEGQADRAGSSEEVAGSEGGSHGDDGPQQCVAN 219

[Close]

BLAST of PI0007630 vs. TAIR 10
Match: AT4G31460.1 (Ribosomal L28 family )

HSP 1 Score: 270.0 bits (689), Expect = 1.7e-72
Identity = 140/215 (65.12%), Postives = 171/215 (79.53%), Query Frame = 0


Query: 1   MAFRGKEMMKKILKKVGENNLAPGVKDSLKKYIPDSKIVMGRANRGIYAGRHIRFGNRVS 60
           MAFRGKEMMKK++KKVG  N+ P +K+ LK  +PD+K+VMGRA RG+YAGRHI++GNRVS
Sbjct: 1   MAFRGKEMMKKLVKKVGAENITPELKEKLKACVPDTKVVMGRAKRGLYAGRHIQYGNRVS 60

Query: 61  EDGGNKSRRKWKPNVQEKRLFSYILDRHIRVKITTHALRCIDKAGGIDEYLLKTPYHKMD 120
           EDGGNKSRR WKPNVQEKRLFSYI D HI+VK+TTHALRCIDKAGGIDEYLLKTPY KMD
Sbjct: 61  EDGGNKSRRCWKPNVQEKRLFSYIFDSHIKVKVTTHALRCIDKAGGIDEYLLKTPYQKMD 120

Query: 121 TELGLFWKSKIETLYEELGKMEVAFFLPEDEAKFEQRFKEMKLSERAARKEARRQMYGSS 180
           TE+GL+WK+K+E  Y ELG+MEVAFF PEDEAK EQ FK++ ++++ AR+EARR      
Sbjct: 121 TEMGLYWKTKVEARYAELGQMEVAFFNPEDEAKLEQGFKDLNIAKKDARREARRTFR--- 180

Query: 181 TKLDQIKEGQEDRNGSNEEAASSEGGSHDDDSHQQ 216
                 K+G  ++    +E AS EGG    +SHQ+
Sbjct: 181 ------KKGGGNK---GDEEASIEGGG-GSESHQE 202

The following BLAST results are available for this feature:

BLAST of PI0007630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P36525	6.5e-13	40.00	54S ribosomal protein L24, mitochondrial OS=Saccharomyces cerevisiae (strain ATC...	[more]
A0L5U1	2.0e-09	45.07	50S ribosomal protein L28 OS=Magnetococcus marinus (strain ATCC BAA-1437 / JCM 1...	[more]
A9HS05	2.6e-09	42.47	50S ribosomal protein L28 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037...	[more]
Q5FUP5	4.4e-09	42.47	50S ribosomal protein L28 OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=rp...	[more]
O60091	2.2e-08	29.94	54S ribosomal protein L24, mitochondrial OS=Schizosaccharomyces pombe (strain 97...	[more]

BLAST of PI0007630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1P8	1.3e-104	91.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G005030 PE=3 SV=1	[more]
A0A1S3BK21	3.2e-103	90.54	54S ribosomal protein L24, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103490718...	[more]
A0A6J1E6M9	8.9e-98	85.39	uncharacterized protein LOC111431195 OS=Cucurbita moschata OX=3662 GN=LOC1114311...	[more]
A0A6J1HLI0	6.4e-96	86.26	uncharacterized protein LOC111465250 OS=Cucurbita maxima OX=3661 GN=LOC111465250...	[more]
A0A6J1CUG4	3.3e-92	81.36	uncharacterized protein LOC111014872 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]

BLAST of PI0007630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146126.1	2.6e-104	91.86	54S ribosomal protein L24, mitochondrial [Cucumis sativus] >KGN55688.1 hypotheti...	[more]
XP_038876561.1	2.2e-103	89.50	uncharacterized protein LOC120068991 [Benincasa hispida]	[more]
XP_008448584.1	6.5e-103	90.54	PREDICTED: 54S ribosomal protein L24, mitochondrial [Cucumis melo] >XP_008448585...	[more]
XP_022923524.1	1.8e-97	85.39	uncharacterized protein LOC111431195 [Cucurbita moschata]	[more]
KAG6577758.1	9.1e-97	84.93	hypothetical protein SDJN03_25332, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of PI0007630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31460.1	1.7e-72	65.12	Ribosomal L28 family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026569	Ribosomal protein L28/L24	PFAM	PF00830	Ribosomal_L28	coord: 48..104 e-value: 4.3E-19 score: 68.4
IPR026569	Ribosomal protein L28/L24	PANTHER	PTHR13528	39S RIBOSOMAL PROTEIN L28, MITOCHONDRIAL	coord: 1..211
IPR037147	Ribosomal protein L28/L24 superfamily	GENE3D	2.30.170.40	Ribosomal protein L28/L24	coord: 48..118 e-value: 3.0E-21 score: 77.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..220
None	No IPR available	PANTHER	PTHR13528:SF11	BNAC03G67590D PROTEIN	coord: 1..211
IPR001383	Ribosomal protein L28	HAMAP	MF_00373	Ribosomal_L28	coord: 40..110 score: 14.14926
IPR034704	L28p-like	SUPERFAMILY	143800	L28p-like	coord: 43..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0007630.1	PI0007630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome