PI0007619 (gene) Melon (PI 482460) v1

Overview


Name	PI0007619
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	DNA-(apurinic or apyrimidinic site) endonuclease
Location	chr02: 15377312 .. 15378666 (-)
RNA-Seq Expression	PI0007619
Synteny	PI0007619

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTGGGTTATGCCTGCTTTAGCTATTGGGCTTCTTATTCTAGCCATGACTGGCCATTCAAGTAAGCTCCCTACATTTTTTTTATATATTTGCTATATACCTTGTAGTGTACACTAAAGTCATAATGCTTGTCTTTTTTACTTCTCATTAATCTTTTGGCTGATTCAAGCATTTTGCCTGTGAATTATAAATATTTTTTGAAATTGTTAATCTTTTGGCGGATTCTTTAATAATTTGTGGTTTCCCATATATTTCCACAGTTTATTTAAAATTAACTACAATATATTTATTTTTAATGCTCTTTTGCTTATAACCTGGTGAATAAACTTCTGTTATAGATACAACCAATTTCAGTTAGATATGGTTTAGGCATATCAAAACATGATGGTGAAGGGCGGGTTGTGATGGTGGAGTTTGATTCATTTTTTTTATTGAATGTTTATGTTCCTAATTCTAGAGACAGATTAAAGAGACTGGTATGACTTCCCAACTGTGTTTAGATTCTTGATATCATGGTTATAGATTCTAATTTGAAGCTTCTTGGTGCATTGCTATCTCTATTTTCACTTTTAGTCATACAGGATTACCCAATGGGATTCCATCTCTTAGTAACTATATTTGTATGCCTTTTTATTTTTTCAGCTTACTTCTTTATCATTCCCAATTTTGCATAGTTAGGGTGAGTTTGGGACGATTTTTGAATGGTGAAATTTGAAAAATGACTTCTAGCGTTTCACAATTTTCAGTGTTTGGATAGATAACTATGAGTGATCTTGAAAACTATAAAAAATGCTAAAAATGATAATGGGAGAGACACTTAACTAGTGTTTCCTCTAAAAGTGATTATCACTTTCAACAACACTTGATGTTCCCAAAGTCTTGGTGTGATTGTGGGAGTGGTCATTGGGTGCTTTTAGGTTGAATTCTTTCATCAAATTGTTACTAGTACTATGCTTTTAGTTGATATATCAAATTTTTGTTGAGTAAAGTTGTGATAGCTAGTGTCGGTACTTAGTTTGAAGACCTCTAATGCTTTTGTATTTTATGTCCAATGATGTTTAGCTCACATAAAAAAAAATTGTTGCAAATGTGGTTAGGTTAAAGCAACATTTCTGAATCTTGTGTATGTATGCTAAAATTTTGCAGGCAAAGAAGTTGAACAGATCGAACAATTTGAATCTTTTGGATGAATCTCCTTCCACTGCTTTTGCTTCTAACAAGTGAGACTTACTCATTTTTCTTATTTGTATGATTGCAATTATGATTCCCTTAGAGTTCTTATTTTTATATGTTTAAACAGTGTTTTGGGCAACGGGTTCAACAATGAGAGGAGAGGAGGAAGAGTAGAATAA

mRNA sequence

ATGTCTTGGGTTATGCCTGCTTTAGCTATTGGGCTTCTTATTCTAGCCATGACTGGCCATTCAATTAGATATGGTTTAGGCATATCAAAACATGATGGTGAAGGGCGGGTTGTGATGGTGGAGTTTGATTCATTTTTTTTATTGAATGTTTATGTTCCTAATTCTAGAGACAGATTAAAGAGACTGGCAAAGAAGTTGAACAGATCGAACAATTTGAATCTTTTGGATGAATCTCCTTCCACTGCTTTTGCTTCTAACAATGTTTTGGGCAACGGGTTCAACAATGAGAGGAGAGGAGGAAGAGTAGAATAA

Coding sequence (CDS)

ATGTCTTGGGTTATGCCTGCTTTAGCTATTGGGCTTCTTATTCTAGCCATGACTGGCCATTCAATTAGATATGGTTTAGGCATATCAAAACATGATGGTGAAGGGCGGGTTGTGATGGTGGAGTTTGATTCATTTTTTTTATTGAATGTTTATGTTCCTAATTCTAGAGACAGATTAAAGAGACTGGCAAAGAAGTTGAACAGATCGAACAATTTGAATCTTTTGGATGAATCTCCTTCCACTGCTTTTGCTTCTAACAATGTTTTGGGCAACGGGTTCAACAATGAGAGGAGAGGAGGAAGAGTAGAATAA

Protein sequence

MSWVMPALAIGLLILAMTGHSIRYGLGISKHDGEGRVVMVEFDSFFLLNVYVPNSRDRLKRLAKKLNRSNNLNLLDESPSTAFASNNVLGNGFNNERRGGRVE

Homology

[Close]

BLAST of PI0007619 vs. ExPASy Swiss-Prot
Match: P45951 (DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ARP PE=1 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 4.9e-11
Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 0


Query: 21  SIRYGLGISKHDGEGRVVMVEFDSFFLLNVYVPNSRDRLKRLAKKLNR-----SNNLNLL 79
           S+RYG G+S HD EGR+V  EFDSF+L+N YVPNS D LKRL+ ++       SN++  L
Sbjct: 359 SVRYGTGLSGHDTEGRIVTAEFDSFYLINTYVPNSGDGLKRLSYRIEEWDRTLSNHIKEL 418

[Close]

BLAST of PI0007619 vs. ExPASy Swiss-Prot
Match: P51173 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Dictyostelium discoideum OX=44689 GN=apeA PE=2 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 3.3e-07
Identity = 22/44 (50.00%), Postives = 36/44 (81.82%), Query Frame = 0


Query: 20  HSIRYGLGISKHDGEGRVVMVEFDSFFLLNVYVPNSRDR-LKRL 63
           ++I +G+GI+KHD EGRV+ +E+D F+++N Y+PN+  R L+RL
Sbjct: 180 NAITFGIGIAKHDNEGRVITLEYDQFYIVNTYIPNAGTRGLQRL 223

[Close]

BLAST of PI0007619 vs. ExPASy Swiss-Prot
Match: P37454 (Exodeoxyribonuclease OS=Bacillus subtilis (strain 168) OX=224308 GN=exoA PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.1e-06
Identity = 20/39 (51.28%), Postives = 31/39 (79.49%), Query Frame = 0


Query: 24  YGLGISKHDGEGRVVMVEFDSFFLLNVYVPNSRDRLKRL 63
           YG+G+ +HD EGRV+ +EF++ F++ VY PNSR  L+R+
Sbjct: 79  YGIGVEEHDQEGRVITLEFENVFVMTVYTPNSRRGLERI 117

[Close]

BLAST of PI0007619 vs. ExPASy Swiss-Prot
Match: A1YES6 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Gorilla gorilla gorilla OX=9595 GN=APEX1 PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 8.0e-06
Identity = 22/41 (53.66%), Postives = 29/41 (70.73%), Query Frame = 0


Query: 22  IRYGLGISKHDGEGRVVMVEFDSFFLLNVYVPNSRDRLKRL 63
           + YG+G  +HD EGRV++ EFDSF L+  YVPN+   L RL
Sbjct: 142 VSYGIGEEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRL 182

[Close]

BLAST of PI0007619 vs. ExPASy Swiss-Prot
Match: P27695 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Homo sapiens OX=9606 GN=APEX1 PE=1 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 8.0e-06
Identity = 22/41 (53.66%), Postives = 29/41 (70.73%), Query Frame = 0


Query: 22  IRYGLGISKHDGEGRVVMVEFDSFFLLNVYVPNSRDRLKRL 63
           + YG+G  +HD EGRV++ EFDSF L+  YVPN+   L RL
Sbjct: 142 VSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRL 182

[Close]

BLAST of PI0007619 vs. ExPASy TrEMBL
Match: A0A5D3DPL5 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007560 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.2e-12
Identity = 38/46 (82.61%), Postives = 43/46 (93.48%), Query Frame = 0


Query: 21  SIRYGLGISKHDGEGRVVMVEFDSFFLLNVYVPNSRDRLKRLAKKL 67
           S+RYGLGIS+HDGEGRVVMVEFDSFFLLNVYVPNS D LKRL+ ++
Sbjct: 335 SVRYGLGISEHDGEGRVVMVEFDSFFLLNVYVPNSGDGLKRLSYRI 380

[Close]

BLAST of PI0007619 vs. ExPASy TrEMBL
Match: A0A5A7UEY3 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G001900 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.2e-12
Identity = 38/46 (82.61%), Postives = 43/46 (93.48%), Query Frame = 0


Query: 21  SIRYGLGISKHDGEGRVVMVEFDSFFLLNVYVPNSRDRLKRLAKKL 67
           S+RYGLGIS+HDGEGRVVMVEFDSFFLLNVYVPNS D LKRL+ ++
Sbjct: 347 SVRYGLGISEHDGEGRVVMVEFDSFFLLNVYVPNSGDGLKRLSYRI 392

[Close]

BLAST of PI0007619 vs. ExPASy TrEMBL
Match: A0A0A0LF64 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis sativus OX=3659 GN=Csa_3G824160 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.2e-12
Identity = 42/63 (66.67%), Postives = 51/63 (80.95%), Query Frame = 0


Query: 21  SIRYGLGISKHDGEGRVVMVEFDSFFLLNVYVPNSRDRLKRLAKKLNR-----SNNLNLL 79
           S+RYGLGIS+HDGEGRVVMVEFDSFFLLNVYVPNS D LKRL+ ++ +     SN +  L
Sbjct: 324 SVRYGLGISEHDGEGRVVMVEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKEL 383

[Close]

BLAST of PI0007619 vs. ExPASy TrEMBL
Match: A0A1S3B7C7 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis melo OX=3656 GN=LOC103486961 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.2e-12
Identity = 38/46 (82.61%), Postives = 43/46 (93.48%), Query Frame = 0


Query: 21  SIRYGLGISKHDGEGRVVMVEFDSFFLLNVYVPNSRDRLKRLAKKL 67
           S+RYGLGIS+HDGEGRVVMVEFDSFFLLNVYVPNS D LKRL+ ++
Sbjct: 337 SVRYGLGISEHDGEGRVVMVEFDSFFLLNVYVPNSGDGLKRLSYRI 382

[Close]

BLAST of PI0007619 vs. ExPASy TrEMBL
Match: A0A1S4DUI2 (DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis melo OX=3656 GN=LOC103486961 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.2e-12
Identity = 38/46 (82.61%), Postives = 43/46 (93.48%), Query Frame = 0


Query: 21  SIRYGLGISKHDGEGRVVMVEFDSFFLLNVYVPNSRDRLKRLAKKL 67
           S+RYGLGIS+HDGEGRVVMVEFDSFFLLNVYVPNS D LKRL+ ++
Sbjct: 290 SVRYGLGISEHDGEGRVVMVEFDSFFLLNVYVPNSGDGLKRLSYRI 335

[Close]

BLAST of PI0007619 vs. NCBI nr
Match: XP_016899623.1 (PREDICTED: DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X3 [Cucumis melo])

HSP 1 Score: 82.4 bits (202), Expect = 2.5e-12
Identity = 38/46 (82.61%), Postives = 43/46 (93.48%), Query Frame = 0


Query: 21  SIRYGLGISKHDGEGRVVMVEFDSFFLLNVYVPNSRDRLKRLAKKL 67
           S+RYGLGIS+HDGEGRVVMVEFDSFFLLNVYVPNS D LKRL+ ++
Sbjct: 290 SVRYGLGISEHDGEGRVVMVEFDSFFLLNVYVPNSGDGLKRLSYRI 335

[Close]

BLAST of PI0007619 vs. NCBI nr
Match: TYK25597.1 (DNA-(apurinic or apyrimidinic site) lyase [Cucumis melo var. makuwa])

HSP 1 Score: 82.4 bits (202), Expect = 2.5e-12
Identity = 38/46 (82.61%), Postives = 43/46 (93.48%), Query Frame = 0


Query: 21  SIRYGLGISKHDGEGRVVMVEFDSFFLLNVYVPNSRDRLKRLAKKL 67
           S+RYGLGIS+HDGEGRVVMVEFDSFFLLNVYVPNS D LKRL+ ++
Sbjct: 335 SVRYGLGISEHDGEGRVVMVEFDSFFLLNVYVPNSGDGLKRLSYRI 380

[Close]

BLAST of PI0007619 vs. NCBI nr
Match: XP_031739368.1 (DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X4 [Cucumis sativus])

HSP 1 Score: 82.4 bits (202), Expect = 2.5e-12
Identity = 42/63 (66.67%), Postives = 51/63 (80.95%), Query Frame = 0


Query: 21  SIRYGLGISKHDGEGRVVMVEFDSFFLLNVYVPNSRDRLKRLAKKLNR-----SNNLNLL 79
           S+RYGLGIS+HDGEGRVVMVEFDSFFLLNVYVPNS D LKRL+ ++ +     SN +  L
Sbjct: 324 SVRYGLGISEHDGEGRVVMVEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKEL 383

[Close]

BLAST of PI0007619 vs. NCBI nr
Match: XP_011652215.1 (DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X5 [Cucumis sativus] >XP_031739369.1 DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X5 [Cucumis sativus])

HSP 1 Score: 82.4 bits (202), Expect = 2.5e-12
Identity = 42/63 (66.67%), Postives = 51/63 (80.95%), Query Frame = 0


Query: 21  SIRYGLGISKHDGEGRVVMVEFDSFFLLNVYVPNSRDRLKRLAKKLNR-----SNNLNLL 79
           S+RYGLGIS+HDGEGRVVMVEFDSFFLLNVYVPNS D LKRL+ ++ +     SN +  L
Sbjct: 290 SVRYGLGISEHDGEGRVVMVEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKEL 349

[Close]

BLAST of PI0007619 vs. NCBI nr
Match: XP_031739365.1 (DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 82.4 bits (202), Expect = 2.5e-12
Identity = 42/63 (66.67%), Postives = 51/63 (80.95%), Query Frame = 0


Query: 21  SIRYGLGISKHDGEGRVVMVEFDSFFLLNVYVPNSRDRLKRLAKKLNR-----SNNLNLL 79
           S+RYGLGIS+HDGEGRVVMVEFDSFFLLNVYVPNS D LKRL+ ++ +     SN +  L
Sbjct: 338 SVRYGLGISEHDGEGRVVMVEFDSFFLLNVYVPNSGDGLKRLSYRITQWDPSLSNYIKEL 397

[Close]

BLAST of PI0007619 vs. TAIR 10
Match: AT2G41460.1 (apurinic endonuclease-redox protein )

HSP 1 Score: 68.6 bits (166), Expect = 3.4e-12
Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 0


Query: 21  SIRYGLGISKHDGEGRVVMVEFDSFFLLNVYVPNSRDRLKRLAKKLNR-----SNNLNLL 79
           S+RYG G+S HD EGR+V  EFDSF+L+N YVPNS D LKRL+ ++       SN++  L
Sbjct: 359 SVRYGTGLSGHDTEGRIVTAEFDSFYLINTYVPNSGDGLKRLSYRIEEWDRTLSNHIKEL 418

[Close]

BLAST of PI0007619 vs. TAIR 10
Match: AT2G41460.2 (apurinic endonuclease-redox protein )

HSP 1 Score: 67.8 bits (164), Expect = 5.9e-12
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 21  SIRYGLGISKHDGEGRVVMVEFDSFFLLNVYVPNSRDRLKRLAKK 66
           S+RYG G+S HD EGR+V  EFDSF+L+N YVPNS D LKRL  K
Sbjct: 359 SVRYGTGLSGHDTEGRIVTAEFDSFYLINTYVPNSGDGLKRLVLK 403

[Close]

BLAST of PI0007619 vs. TAIR 10
Match: AT3G61030.1 (Calcium-dependent lipid-binding (CaLB domain) family protein )

HSP 1 Score: 54.3 bits (129), Expect = 6.7e-08
Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 22  IRYGLGI--SKHDGEGRVVMVEFDSFFLLNVYVPNSRDRLKRLA-KKLN 68
           +RYG G+  S HD EGR+V  EFDSF+L++ YVPNS D LK L   KLN
Sbjct: 446 VRYGTGLSGSDHDMEGRMVTAEFDSFYLISTYVPNSVDGLKGLVLLKLN 494

[Close]

BLAST of PI0007619 vs. TAIR 10
Match: AT3G60950.1 (C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase )

HSP 1 Score: 54.3 bits (129), Expect = 6.7e-08
Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 22  IRYGLGI--SKHDGEGRVVMVEFDSFFLLNVYVPNSRDRLKRLA-KKLN 68
           +RYG G+  S HD EGR+V  EFDSF+L++ YVPNS D LK L   KLN
Sbjct: 507 VRYGTGLSGSDHDMEGRMVTAEFDSFYLISTYVPNSVDGLKGLVLLKLN 555

The following BLAST results are available for this feature:

BLAST of PI0007619 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P45951	4.9e-11	52.38	DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic OS=Arabidopsis t...	[more]
P51173	3.3e-07	50.00	DNA-(apurinic or apyrimidinic site) endonuclease OS=Dictyostelium discoideum OX=...	[more]
P37454	2.1e-06	51.28	Exodeoxyribonuclease OS=Bacillus subtilis (strain 168) OX=224308 GN=exoA PE=1 SV...	[more]
A1YES6	8.0e-06	53.66	DNA-(apurinic or apyrimidinic site) endonuclease OS=Gorilla gorilla gorilla OX=9...	[more]
P27695	8.0e-06	53.66	DNA-(apurinic or apyrimidinic site) endonuclease OS=Homo sapiens OX=9606 GN=APEX...	[more]

BLAST of PI0007619 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DPL5	1.2e-12	82.61	DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis melo var. makuwa OX=...	[more]
A0A5A7UEY3	1.2e-12	82.61	DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis melo var. makuwa OX=...	[more]
A0A0A0LF64	1.2e-12	66.67	DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis sativus OX=3659 GN=C...	[more]
A0A1S3B7C7	1.2e-12	82.61	DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A1S4DUI2	1.2e-12	82.61	DNA-(apurinic or apyrimidinic site) endonuclease OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of PI0007619 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016899623.1	2.5e-12	82.61	PREDICTED: DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X3 [...	[more]
TYK25597.1	2.5e-12	82.61	DNA-(apurinic or apyrimidinic site) lyase [Cucumis melo var. makuwa]	[more]
XP_031739368.1	2.5e-12	66.67	DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X4 [Cucumis sat...	[more]
XP_011652215.1	2.5e-12	66.67	DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X5 [Cucumis sat...	[more]
XP_031739365.1	2.5e-12	66.67	DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1 [Cucumis sat...	[more]

BLAST of PI0007619 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41460.1	3.4e-12	52.38	apurinic endonuclease-redox protein	[more]
AT2G41460.2	5.9e-12	66.67	apurinic endonuclease-redox protein	[more]
AT3G61030.1	6.7e-08	59.18	Calcium-dependent lipid-binding (CaLB domain) family protein	[more]
AT3G60950.1	6.7e-08	59.18	C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 11..94 e-value: 3.5E-10 score: 42.0
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 21..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..103
None	No IPR available	PANTHER	PTHR22748:SF6	DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE	coord: 20..68
IPR004808	AP endonuclease 1	PANTHER	PTHR22748	AP ENDONUCLEASE	coord: 20..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0007619.1	PI0007619.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016311	dephosphorylation
biological_process	GO:0033683	nucleotide-excision repair, DNA incision
biological_process	GO:0006281	DNA repair
cellular_component	GO:0042644	chloroplast nucleoid
molecular_function	GO:0008408	3'-5' exonuclease activity
molecular_function	GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016791	phosphatase activity
molecular_function	GO:0004528	phosphodiesterase I activity
molecular_function	GO:0004518	nuclease activity