PI0007318 (gene) Melon (PI 482460) v1

Overview


Name	PI0007318
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Titin-like protein isoform X2
Location	chr07: 21687790 .. 21688737 (-)
RNA-Seq Expression	PI0007318
Synteny	PI0007318

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAGTGCTATCAACTCAATCAGATTTACTAGCTATTGCTGATGGTGAAATAGCACTACCAACCCGAGCTGGAGAAGAGGAAATTGATTTGAGGAAGGCTGATGTTGCACTCGAGAAACAACATTCCAATATATCTGATTTGTTTGAGCCACCATCTTTTATGACATTGGTTGAACCAAATGATGGTGGGTCCCCAAAGTCAACCAGTACCGAAATCCATACTATACAAAATCGAGAACAACCAAATCCTACATCTCTACAAGCTGGCTGGTTTCCATCTTATATTCATGTTGCAAACAACTCGCCAGGAAGAAAGAAAAACGAAGCAATAATTGCTAAGGTGACGAACTGAAGTGCAGAAAGCCACAGATAGTTGGTAAATGGCTTAGCACCGTGTTTAATCTCAAGAACCTTTTGGATGATTTTGCATTTAAAAACAAGTAGAAATCGTCACCAAAGCAAAAAGATAATCTGGCTTCTATGACTTAGAAAGATAAAAAACCAACAAAAAGGGCTCATTTGAGAAAAAGGTCGACTTCGTTATGCAGTTGAAATCGCCTACCTCATAGTTAGTAAATAAAGAGATTGTAATAGGGTGGAACTCTCCGGCAAGATATCAATCATGCATCAGGAGAGAGAGGAGAGAAGTTAACTAACTCCCTGTTTTTACATTTCCATTTTGATCTTTTTTATCTTGGCTTTTCGTTCCCTCTTTCAGTGGAGTTCATGTTTGAAACAAATGTGGATGACTCTTCCAAACCCTCATCTGAGTGCCAAACGTATGCATGCACATAAGAGGGCTTGTGGAACAATTGAAGGTTTCAAGTTGGTTGAGTCTGAGGCTAATGCCCATTTGACTGTTGTTTCAGATGATGATGTTGATCACAAAATCTCTGGTCCAAAAGTCTGGGAGGGAGATACGGTGATGACGGTGTTGATGACATGA

mRNA sequence

ATGTTAGTGCTATCAACTCAATCAGATTTACTAGCTATTGCTGATGGTGAAATAGCACTACCAACCCGAGCTGGAGAAGAGGAAATTGATTTGAGGAAGGCTGATGTTGCACTCGAGAAACAACATTCCAATATATCTGATTTGTTTGAGCCACCATCTTTTATGACATTGGTTGAACCAAATGATGGTGGGTCCCCAAAGTCAACCAGTACCGAAATCCATACTATACAAAATCGAGAACAACCAAATCCTACATCTCTACAAGCTGGCTGGTTTCCATCTTATATTCATGTTGCAAACAACTCGCCAGGAAGAAAGAAAAACGAAGCAATAATTGCTAAGTGGAGTTCATGTTTGAAACAAATGTGGATGACTCTTCCAAACCCTCATCTGAGTGCCAAACGTATGCATGCACATAAGAGGGCTTGTGGAACAATTGAAGGTTTCAAGTTGGTTGAGTCTGAGGCTAATGCCCATTTGACTGTTGTTTCAGATGATGATGTTGATCACAAAATCTCTGGTCCAAAAGTCTGGGAGGGAGATACGGTGATGACGGTGTTGATGACATGA

Coding sequence (CDS)

ATGTTAGTGCTATCAACTCAATCAGATTTACTAGCTATTGCTGATGGTGAAATAGCACTACCAACCCGAGCTGGAGAAGAGGAAATTGATTTGAGGAAGGCTGATGTTGCACTCGAGAAACAACATTCCAATATATCTGATTTGTTTGAGCCACCATCTTTTATGACATTGGTTGAACCAAATGATGGTGGGTCCCCAAAGTCAACCAGTACCGAAATCCATACTATACAAAATCGAGAACAACCAAATCCTACATCTCTACAAGCTGGCTGGTTTCCATCTTATATTCATGTTGCAAACAACTCGCCAGGAAGAAAGAAAAACGAAGCAATAATTGCTAAGTGGAGTTCATGTTTGAAACAAATGTGGATGACTCTTCCAAACCCTCATCTGAGTGCCAAACGTATGCATGCACATAAGAGGGCTTGTGGAACAATTGAAGGTTTCAAGTTGGTTGAGTCTGAGGCTAATGCCCATTTGACTGTTGTTTCAGATGATGATGTTGATCACAAAATCTCTGGTCCAAAAGTCTGGGAGGGAGATACGGTGATGACGGTGTTGATGACATGA

Protein sequence

MLVLSTQSDLLAIADGEIALPTRAGEEEIDLRKADVALEKQHSNISDLFEPPSFMTLVEPNDGGSPKSTSTEIHTIQNREQPNPTSLQAGWFPSYIHVANNSPGRKKNEAIIAKWSSCLKQMWMTLPNPHLSAKRMHAHKRACGTIEGFKLVESEANAHLTVVSDDDVDHKISGPKVWEGDTVMTVLMT

Homology

[Close]

BLAST of PI0007318 vs. ExPASy TrEMBL
Match: A0A5D3DJ29 (Titin-like protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00090 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 5.9e-42
Identity = 91/118 (77.12%), Postives = 99/118 (83.90%), Query Frame = 0


Query: 3   VLSTQSDLLAIADGEIALPTRAGEEEIDLRKADVALEKQHSNISDLFEPPSFMTLVEPND 62
           VLSTQSDLLA+ DGE+   TRAG EE DLRKAD A E+QHS+ SDLFEPPSFMTLVEPN 
Sbjct: 837 VLSTQSDLLAVVDGEVTPQTRAGAEETDLRKADAAPERQHSDRSDLFEPPSFMTLVEPNG 896

Query: 63  GGSPKSTSTEIHTIQNREQPNPTSLQAGWFPSYIHVANNSPGRKKNEAIIAK---WSS 118
           GG P S +TEI T +NREQPNPTSLQAGWFPSY HVAN+SPGRKKNEAIIAK   WS+
Sbjct: 897 GGIPNSATTEIQTARNREQPNPTSLQAGWFPSYTHVANDSPGRKKNEAIIAKVTNWSA 954

[Close]

BLAST of PI0007318 vs. ExPASy TrEMBL
Match: A0A1S3AXS0 (titin homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483951 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 2.3e-41
Identity = 90/118 (76.27%), Postives = 98/118 (83.05%), Query Frame = 0


Query: 3   VLSTQSDLLAIADGEIALPTRAGEEEIDLRKADVALEKQHSNISDLFEPPSFMTLVEPND 62
           VLSTQSDLLA+ DGE+    RAG EE DLRKAD A E+QHS+ SDLFEPPSFMTLVEPN 
Sbjct: 841 VLSTQSDLLAVVDGEVTPQARAGAEETDLRKADAAPERQHSDRSDLFEPPSFMTLVEPNG 900

Query: 63  GGSPKSTSTEIHTIQNREQPNPTSLQAGWFPSYIHVANNSPGRKKNEAIIAK---WSS 118
           GG P S +TEI T +NREQPNPTSLQAGWFPSY HVAN+SPGRKKNEAIIAK   WS+
Sbjct: 901 GGIPNSATTEIQTARNREQPNPTSLQAGWFPSYTHVANDSPGRKKNEAIIAKVTNWSA 958

[Close]

BLAST of PI0007318 vs. ExPASy TrEMBL
Match: A0A1S3AYF3 (titin homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483951 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 2.3e-41
Identity = 90/118 (76.27%), Postives = 98/118 (83.05%), Query Frame = 0


Query: 3   VLSTQSDLLAIADGEIALPTRAGEEEIDLRKADVALEKQHSNISDLFEPPSFMTLVEPND 62
           VLSTQSDLLA+ DGE+    RAG EE DLRKAD A E+QHS+ SDLFEPPSFMTLVEPN 
Sbjct: 837 VLSTQSDLLAVVDGEVTPQARAGAEETDLRKADAAPERQHSDRSDLFEPPSFMTLVEPNG 896

Query: 63  GGSPKSTSTEIHTIQNREQPNPTSLQAGWFPSYIHVANNSPGRKKNEAIIAK---WSS 118
           GG P S +TEI T +NREQPNPTSLQAGWFPSY HVAN+SPGRKKNEAIIAK   WS+
Sbjct: 897 GGIPNSATTEIQTARNREQPNPTSLQAGWFPSYTHVANDSPGRKKNEAIIAKVTNWSA 954

[Close]

BLAST of PI0007318 vs. ExPASy TrEMBL
Match: A0A1S3AYG7 (titin homolog isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483951 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 2.3e-41
Identity = 90/118 (76.27%), Postives = 98/118 (83.05%), Query Frame = 0


Query: 3   VLSTQSDLLAIADGEIALPTRAGEEEIDLRKADVALEKQHSNISDLFEPPSFMTLVEPND 62
           VLSTQSDLLA+ DGE+    RAG EE DLRKAD A E+QHS+ SDLFEPPSFMTLVEPN 
Sbjct: 755 VLSTQSDLLAVVDGEVTPQARAGAEETDLRKADAAPERQHSDRSDLFEPPSFMTLVEPNG 814

Query: 63  GGSPKSTSTEIHTIQNREQPNPTSLQAGWFPSYIHVANNSPGRKKNEAIIAK---WSS 118
           GG P S +TEI T +NREQPNPTSLQAGWFPSY HVAN+SPGRKKNEAIIAK   WS+
Sbjct: 815 GGIPNSATTEIQTARNREQPNPTSLQAGWFPSYTHVANDSPGRKKNEAIIAKVTNWSA 872

[Close]

BLAST of PI0007318 vs. ExPASy TrEMBL
Match: A0A0A0LAY3 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G172410 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 8.6e-41
Identity = 89/118 (75.42%), Postives = 98/118 (83.05%), Query Frame = 0


Query: 3   VLSTQSDLLAIADGEIALPTRAGEEEIDLRKADVALEKQHSNISDLFEPPSFMTLVEPND 62
           VLSTQSDLLA+ DGE+    RAG EE DLRKA+ A E+QHS+ SDLFEPPSFMTLVEPN 
Sbjct: 846 VLSTQSDLLAVVDGEVTPQARAGAEETDLRKANAAPERQHSDRSDLFEPPSFMTLVEPNG 905

Query: 63  GGSPKSTSTEIHTIQNREQPNPTSLQAGWFPSYIHVANNSPGRKKNEAIIAK---WSS 118
           GG P S +TEI T +NREQPNPTSLQAGWFPSY HVAN+SPGRKKNEAIIAK   WS+
Sbjct: 906 GGIPNSATTEIQTARNREQPNPTSLQAGWFPSYTHVANDSPGRKKNEAIIAKVTNWSA 963

[Close]

BLAST of PI0007318 vs. NCBI nr
Match: KAA0067642.1 (titin-like protein isoform X2 [Cucumis melo var. makuwa] >TYK23644.1 titin-like protein isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 180.6 bits (457), Expect = 1.2e-41
Identity = 91/118 (77.12%), Postives = 99/118 (83.90%), Query Frame = 0


Query: 3   VLSTQSDLLAIADGEIALPTRAGEEEIDLRKADVALEKQHSNISDLFEPPSFMTLVEPND 62
           VLSTQSDLLA+ DGE+   TRAG EE DLRKAD A E+QHS+ SDLFEPPSFMTLVEPN 
Sbjct: 837 VLSTQSDLLAVVDGEVTPQTRAGAEETDLRKADAAPERQHSDRSDLFEPPSFMTLVEPNG 896

Query: 63  GGSPKSTSTEIHTIQNREQPNPTSLQAGWFPSYIHVANNSPGRKKNEAIIAK---WSS 118
           GG P S +TEI T +NREQPNPTSLQAGWFPSY HVAN+SPGRKKNEAIIAK   WS+
Sbjct: 897 GGIPNSATTEIQTARNREQPNPTSLQAGWFPSYTHVANDSPGRKKNEAIIAKVTNWSA 954

[Close]

BLAST of PI0007318 vs. NCBI nr
Match: XP_008439048.1 (PREDICTED: titin homolog isoform X3 [Cucumis melo])

HSP 1 Score: 178.7 bits (452), Expect = 4.7e-41
Identity = 90/118 (76.27%), Postives = 98/118 (83.05%), Query Frame = 0


Query: 3   VLSTQSDLLAIADGEIALPTRAGEEEIDLRKADVALEKQHSNISDLFEPPSFMTLVEPND 62
           VLSTQSDLLA+ DGE+    RAG EE DLRKAD A E+QHS+ SDLFEPPSFMTLVEPN 
Sbjct: 755 VLSTQSDLLAVVDGEVTPQARAGAEETDLRKADAAPERQHSDRSDLFEPPSFMTLVEPNG 814

Query: 63  GGSPKSTSTEIHTIQNREQPNPTSLQAGWFPSYIHVANNSPGRKKNEAIIAK---WSS 118
           GG P S +TEI T +NREQPNPTSLQAGWFPSY HVAN+SPGRKKNEAIIAK   WS+
Sbjct: 815 GGIPNSATTEIQTARNREQPNPTSLQAGWFPSYTHVANDSPGRKKNEAIIAKVTNWSA 872

[Close]

BLAST of PI0007318 vs. NCBI nr
Match: XP_008439047.1 (PREDICTED: titin homolog isoform X2 [Cucumis melo])

HSP 1 Score: 178.7 bits (452), Expect = 4.7e-41
Identity = 90/118 (76.27%), Postives = 98/118 (83.05%), Query Frame = 0


Query: 3   VLSTQSDLLAIADGEIALPTRAGEEEIDLRKADVALEKQHSNISDLFEPPSFMTLVEPND 62
           VLSTQSDLLA+ DGE+    RAG EE DLRKAD A E+QHS+ SDLFEPPSFMTLVEPN 
Sbjct: 837 VLSTQSDLLAVVDGEVTPQARAGAEETDLRKADAAPERQHSDRSDLFEPPSFMTLVEPNG 896

Query: 63  GGSPKSTSTEIHTIQNREQPNPTSLQAGWFPSYIHVANNSPGRKKNEAIIAK---WSS 118
           GG P S +TEI T +NREQPNPTSLQAGWFPSY HVAN+SPGRKKNEAIIAK   WS+
Sbjct: 897 GGIPNSATTEIQTARNREQPNPTSLQAGWFPSYTHVANDSPGRKKNEAIIAKVTNWSA 954

[Close]

BLAST of PI0007318 vs. NCBI nr
Match: XP_008439045.1 (PREDICTED: titin homolog isoform X1 [Cucumis melo] >XP_008439046.1 PREDICTED: titin homolog isoform X1 [Cucumis melo])

HSP 1 Score: 178.7 bits (452), Expect = 4.7e-41
Identity = 90/118 (76.27%), Postives = 98/118 (83.05%), Query Frame = 0


Query: 3   VLSTQSDLLAIADGEIALPTRAGEEEIDLRKADVALEKQHSNISDLFEPPSFMTLVEPND 62
           VLSTQSDLLA+ DGE+    RAG EE DLRKAD A E+QHS+ SDLFEPPSFMTLVEPN 
Sbjct: 841 VLSTQSDLLAVVDGEVTPQARAGAEETDLRKADAAPERQHSDRSDLFEPPSFMTLVEPNG 900

Query: 63  GGSPKSTSTEIHTIQNREQPNPTSLQAGWFPSYIHVANNSPGRKKNEAIIAK---WSS 118
           GG P S +TEI T +NREQPNPTSLQAGWFPSY HVAN+SPGRKKNEAIIAK   WS+
Sbjct: 901 GGIPNSATTEIQTARNREQPNPTSLQAGWFPSYTHVANDSPGRKKNEAIIAKVTNWSA 958

[Close]

BLAST of PI0007318 vs. NCBI nr
Match: XP_011651106.1 (uncharacterized protein LOC101215780 [Cucumis sativus] >KAE8650420.1 hypothetical protein Csa_010576 [Cucumis sativus])

HSP 1 Score: 176.8 bits (447), Expect = 1.8e-40
Identity = 89/118 (75.42%), Postives = 98/118 (83.05%), Query Frame = 0


Query: 3   VLSTQSDLLAIADGEIALPTRAGEEEIDLRKADVALEKQHSNISDLFEPPSFMTLVEPND 62
           VLSTQSDLLA+ DGE+    RAG EE DLRKA+ A E+QHS+ SDLFEPPSFMTLVEPN 
Sbjct: 850 VLSTQSDLLAVVDGEVTPQARAGAEETDLRKANAAPERQHSDRSDLFEPPSFMTLVEPNG 909

Query: 63  GGSPKSTSTEIHTIQNREQPNPTSLQAGWFPSYIHVANNSPGRKKNEAIIAK---WSS 118
           GG P S +TEI T +NREQPNPTSLQAGWFPSY HVAN+SPGRKKNEAIIAK   WS+
Sbjct: 910 GGIPNSATTEIQTARNREQPNPTSLQAGWFPSYTHVANDSPGRKKNEAIIAKVTNWSA 967

[Close]

BLAST of PI0007318 vs. TAIR 10
Match: AT4G14200.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 49.7 bits (117), Expect = 3.0e-06
Identity = 26/56 (46.43%), Postives = 33/56 (58.93%), Query Frame = 0


Query: 100 NNSPGRKKNEAIIAKWSSCLKQMWMTLPNPHLSAKRMHAHKRACGTIEGFKLVESE 156
           +NSPG  KN         C K  W +  NPH SAK   AHK+ CGTI+GF++ +SE
Sbjct: 8   SNSPGGGKNHV-------CTKCGW-SYSNPHPSAKNRRAHKKICGTIKGFEIFDSE 55

The following BLAST results are available for this feature:

BLAST of PI0007318 vs.


Match Name	E-value	Identity	Description

BLAST of PI0007318 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DJ29	5.9e-42	77.12	Titin-like protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3AXS0	2.3e-41	76.27	titin homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483951 PE=4 SV=1	[more]
A0A1S3AYF3	2.3e-41	76.27	titin homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483951 PE=4 SV=1	[more]
A0A1S3AYG7	2.3e-41	76.27	titin homolog isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483951 PE=4 SV=1	[more]
A0A0A0LAY3	8.6e-41	75.42	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G172410 P...	[more]

BLAST of PI0007318 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067642.1	1.2e-41	77.12	titin-like protein isoform X2 [Cucumis melo var. makuwa] >TYK23644.1 titin-like ...	[more]
XP_008439048.1	4.7e-41	76.27	PREDICTED: titin homolog isoform X3 [Cucumis melo]	[more]
XP_008439047.1	4.7e-41	76.27	PREDICTED: titin homolog isoform X2 [Cucumis melo]	[more]
XP_008439045.1	4.7e-41	76.27	PREDICTED: titin homolog isoform X1 [Cucumis melo] >XP_008439046.1 PREDICTED: ti...	[more]
XP_011651106.1	1.8e-40	75.42	uncharacterized protein LOC101215780 [Cucumis sativus] >KAE8650420.1 hypothetica...	[more]

BLAST of PI0007318 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14200.1	3.0e-06	46.43	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35746	PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN	coord: 126..181
None	No IPR available	PANTHER	PTHR35746:SF1	PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN	coord: 23..114
None	No IPR available	PANTHER	PTHR35746	PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN	coord: 23..114
None	No IPR available	PANTHER	PTHR35746:SF1	PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN	coord: 126..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0007318.1	PI0007318.1	mRNA