PI0007274 (gene) Melon (PI 482460) v1

Overview
NamePI0007274
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
Descriptionrubisco accumulation factor 1, chloroplastic
Locationchr02: 14112038 .. 14113863 (-)
RNA-Seq ExpressionPI0007274
SyntenyPI0007274
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAATATCTCCCAATCCCATATTTCCAAACTGAGTATCAAATAGATAAGATACAGAGACTCTCTTCCTCCTCTCTTCCCACCATTTCCATTCACCATGCTCTCCTCCACCATCACCAACGCCAACTCTCTCACTTCTCTCTCCTCCATCGCCCACACCACCGCCATCTTCCTCCATCAACCCAGAGATTCCCCTCTCCGCTTCTTCCTCCATCGCCGTCCAAACCCCATTTCCGCCATTATTAACCCTTCCCCTTCCCCCTTAGCCGCAAAGCAACAAGTGTACCAGCCATTCCGCCCCCCTCCCTCTCCTCTTCCTCCTCAATACCGCTCCCTCGACACCGAAGGCAAGCTCAATGTCCTCTCCAACCGCCTCGGCCTCTGGTTCGAGTACGCCCCCCTCATTTCCTCCTTGTTTCAAGAGGGCTTCACTCCTCCCACTCTAGAAGAAATCACCGGAATTAGCGGTGTCCAGCAGAACATCTTCGTCGTTGGCGCTCAGGTTCGCGATTCTCTAGTTCAGTCCGATGACTCGGATCCAGATGTAATCGCCTCCTTCGATACTGGTGGTGCAGAGTTGCTCTATGAAATTCGGCTTCTAAGTACTGAGAAACGCGCTGCGGCGGCCAAATATATAGTGGAGAACAGGCTTGATACCAAAGGCGCCCAGGATCTGGCTCGAGCGATGAAGGATTTTCCTCGACGAAGAGGGGATAAAGGTTGGGAGTGTTTTGATTACGATTCTGCTGGGGATTGTTTGGCGTATATGTATTACAGGTTAAGTAGAGAGTACAATAATTCATCGGAGCGGAGGACGGCGGCGTTGGAGGAGGCGTTGAAAGTGGTAGTGACGGAGAAGGCGAGGGATTTGATTGTTGGGGATTTGGAGAGGAAAGGAGATGGGAAGGACGGGGTTGAAGAGGAAATTGGAGCGGGAGTTAGGGTTCCGGTGGTGCGGATGAAGATTGGGGAGGTGGCAGAGGCGACGACGGTGGTGGTGATGCCGGTGTGCAAGGCAGGGGAAGGGGAAAAGGGAGTTGGAGAGGCGCCAATGGAGGTGAGAAGCGAGGGAGAATTCGGGGTTGTGGTGGCGGAAAAGGGGTGGAGCAGGTGGGTGGTGCTGCCGGGATGGGAGCCTGTGGCTGGGTTGGTGAAGGGCGGTGGCGTAGTGGTGGCGTTTGGGGATGCGAGGGTTCTGCCATGGCGAGTGAACAGGTGGTACAAGGAGGAGCCAATTCTGGTAGTGGCTGATCGGAGAAGGAAGGAGGTGGTGGCGGGAGATGGGTTTTATCTGATGGGTGGAACTGTGGGCGGCGGCGATGGAGGTGGGGAGTTGAAGGTGGAGAGAGGAAATGCATTGTTGGAAAAGGGAGTGAAGGAGAGTTTAGGAACAGTATTGTTGGTGGTTAGGCCACCAAAGGAGATGGAAGATGATCAATTGAGTGATGAAGATTGGGATTAAACTAAACAAAACTCATTTTTAAGACTCACAACAGTTCAGTATTAGGTATTATTATATTATATTCTACACTTACAAATGTTGTATCATTGATTTTGGTTATTCAATTTTATGTGCTTCCCACTTTCTTTTCCTCTTTTATTTCATTTATTTTCTCCTTTCCTCTTTTCACTATACATGCGTGTGGTTTTGGAGCTTTTTCCATTGTAATTTAACTTTGCTTAATAGATCTTTATAGAGGTGATTTGGTTATAATAATAATTTGTGATTAGGATGCCTACTACTTTTTGTGATTGTAATGGTTTATTTTTCGATTAGTACATGCTATTTTGATCGGTTAAACATGGCCACTTGCAAGATCGACG

mRNA sequence

AAAAAAAATATCTCCCAATCCCATATTTCCAAACTGAGTATCAAATAGATAAGATACAGAGACTCTCTTCCTCCTCTCTTCCCACCATTTCCATTCACCATGCTCTCCTCCACCATCACCAACGCCAACTCTCTCACTTCTCTCTCCTCCATCGCCCACACCACCGCCATCTTCCTCCATCAACCCAGAGATTCCCCTCTCCGCTTCTTCCTCCATCGCCGTCCAAACCCCATTTCCGCCATTATTAACCCTTCCCCTTCCCCCTTAGCCGCAAAGCAACAAGTGTACCAGCCATTCCGCCCCCCTCCCTCTCCTCTTCCTCCTCAATACCGCTCCCTCGACACCGAAGGCAAGCTCAATGTCCTCTCCAACCGCCTCGGCCTCTGGTTCGAGTACGCCCCCCTCATTTCCTCCTTGTTTCAAGAGGGCTTCACTCCTCCCACTCTAGAAGAAATCACCGGAATTAGCGGTGTCCAGCAGAACATCTTCGTCGTTGGCGCTCAGGTTCGCGATTCTCTAGTTCAGTCCGATGACTCGGATCCAGATGTAATCGCCTCCTTCGATACTGGTGGTGCAGAGTTGCTCTATGAAATTCGGCTTCTAAGTACTGAGAAACGCGCTGCGGCGGCCAAATATATAGTGGAGAACAGGCTTGATACCAAAGGCGCCCAGGATCTGGCTCGAGCGATGAAGGATTTTCCTCGACGAAGAGGGGATAAAGGTTGGGAGTGTTTTGATTACGATTCTGCTGGGGATTGTTTGGCGTATATGTATTACAGGTTAAGTAGAGAGTACAATAATTCATCGGAGCGGAGGACGGCGGCGTTGGAGGAGGCGTTGAAAGTGGTAGTGACGGAGAAGGCGAGGGATTTGATTGTTGGGGATTTGGAGAGGAAAGGAGATGGGAAGGACGGGGTTGAAGAGGAAATTGGAGCGGGAGTTAGGGTTCCGGTGGTGCGGATGAAGATTGGGGAGGTGGCAGAGGCGACGACGGTGGTGGTGATGCCGGTGTGCAAGGCAGGGGAAGGGGAAAAGGGAGTTGGAGAGGCGCCAATGGAGGTGAGAAGCGAGGGAGAATTCGGGGTTGTGGTGGCGGAAAAGGGGTGGAGCAGGTGGGTGGTGCTGCCGGGATGGGAGCCTGTGGCTGGGTTGGTGAAGGGCGGTGGCGTAGTGGTGGCGTTTGGGGATGCGAGGGTTCTGCCATGGCGAGTGAACAGGTGGTACAAGGAGGAGCCAATTCTGGTAGTGGCTGATCGGAGAAGGAAGGAGGTGGTGGCGGGAGATGGGTTTTATCTGATGGGTGGAACTGTGGGCGGCGGCGATGGAGGTGGGGAGTTGAAGGTGGAGAGAGGAAATGCATTGTTGGAAAAGGGAGTGAAGGAGAGTTTAGGAACAGTATTGTTGGTGGTTAGGCCACCAAAGGAGATGGAAGATGATCAATTGAGTGATGAAGATTGGGATTAAACTAAACAAAACTCATTTTTAAGACTCACAACAGTTCAGTATTAGGTATTATTATATTATATTCTACACTTACAAATGTTGTATCATTGATTTTGGTTATTCAATTTTATGTGCTTCCCACTTTCTTTTCCTCTTTTATTTCATTTATTTTCTCCTTTCCTCTTTTCACTATACATGCGTGTGGTTTTGGAGCTTTTTCCATTGTAATTTAACTTTGCTTAATAGATCTTTATAGAGGTGATTTGGTTATAATAATAATTTGTGATTAGGATGCCTACTACTTTTTGTGATTGTAATGGTTTATTTTTCGATTAGTACATGCTATTTTGATCGGTTAAACATGGCCACTTGCAAGATCGACG

Coding sequence (CDS)

ATGCTCTCCTCCACCATCACCAACGCCAACTCTCTCACTTCTCTCTCCTCCATCGCCCACACCACCGCCATCTTCCTCCATCAACCCAGAGATTCCCCTCTCCGCTTCTTCCTCCATCGCCGTCCAAACCCCATTTCCGCCATTATTAACCCTTCCCCTTCCCCCTTAGCCGCAAAGCAACAAGTGTACCAGCCATTCCGCCCCCCTCCCTCTCCTCTTCCTCCTCAATACCGCTCCCTCGACACCGAAGGCAAGCTCAATGTCCTCTCCAACCGCCTCGGCCTCTGGTTCGAGTACGCCCCCCTCATTTCCTCCTTGTTTCAAGAGGGCTTCACTCCTCCCACTCTAGAAGAAATCACCGGAATTAGCGGTGTCCAGCAGAACATCTTCGTCGTTGGCGCTCAGGTTCGCGATTCTCTAGTTCAGTCCGATGACTCGGATCCAGATGTAATCGCCTCCTTCGATACTGGTGGTGCAGAGTTGCTCTATGAAATTCGGCTTCTAAGTACTGAGAAACGCGCTGCGGCGGCCAAATATATAGTGGAGAACAGGCTTGATACCAAAGGCGCCCAGGATCTGGCTCGAGCGATGAAGGATTTTCCTCGACGAAGAGGGGATAAAGGTTGGGAGTGTTTTGATTACGATTCTGCTGGGGATTGTTTGGCGTATATGTATTACAGGTTAAGTAGAGAGTACAATAATTCATCGGAGCGGAGGACGGCGGCGTTGGAGGAGGCGTTGAAAGTGGTAGTGACGGAGAAGGCGAGGGATTTGATTGTTGGGGATTTGGAGAGGAAAGGAGATGGGAAGGACGGGGTTGAAGAGGAAATTGGAGCGGGAGTTAGGGTTCCGGTGGTGCGGATGAAGATTGGGGAGGTGGCAGAGGCGACGACGGTGGTGGTGATGCCGGTGTGCAAGGCAGGGGAAGGGGAAAAGGGAGTTGGAGAGGCGCCAATGGAGGTGAGAAGCGAGGGAGAATTCGGGGTTGTGGTGGCGGAAAAGGGGTGGAGCAGGTGGGTGGTGCTGCCGGGATGGGAGCCTGTGGCTGGGTTGGTGAAGGGCGGTGGCGTAGTGGTGGCGTTTGGGGATGCGAGGGTTCTGCCATGGCGAGTGAACAGGTGGTACAAGGAGGAGCCAATTCTGGTAGTGGCTGATCGGAGAAGGAAGGAGGTGGTGGCGGGAGATGGGTTTTATCTGATGGGTGGAACTGTGGGCGGCGGCGATGGAGGTGGGGAGTTGAAGGTGGAGAGAGGAAATGCATTGTTGGAAAAGGGAGTGAAGGAGAGTTTAGGAACAGTATTGTTGGTGGTTAGGCCACCAAAGGAGATGGAAGATGATCAATTGAGTGATGAAGATTGGGATTAA

Protein sequence

MLSSTITNANSLTSLSSIAHTTAIFLHQPRDSPLRFFLHRRPNPISAIINPSPSPLAAKQQVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLFQEGFTPPTLEEITGISGVQQNIFVVGAQVRDSLVQSDDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYIVENRLDTKGAQDLARAMKDFPRRRGDKGWECFDYDSAGDCLAYMYYRLSREYNNSSERRTAALEEALKVVVTEKARDLIVGDLERKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATTVVVMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVAFGDARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNALLEKGVKESLGTVLLVVRPPKEMEDDQLSDEDWD
Homology
BLAST of PI0007274 vs. ExPASy Swiss-Prot
Match: Q9LKR8 (Rubisco accumulation factor 1.1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RAF1.1 PE=1 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 4.5e-125
Identity = 258/458 (56.33%), Postives = 330/458 (72.05%), Query Frame = 0

Query: 1   MLSSTITNANSLTSLSSIAHTTAIFLHQPRDSPLRFFLHRRP--NPISAIINPSPSPLAA 60
           MLS T T  +S  S+ + + T   F  +P        ++R+P     SA+I  S      
Sbjct: 1   MLSLTATTLSS--SIFTQSKTHGFFNTRP--------VYRKPFTTITSALIPASNRQAPP 60

Query: 61  KQQVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLFQEGFTPPTLEE 120
           KQQ+YQPFRPPPSP+PP++RSLDT GK+ VL++RLGLWFEYAPLISSL+ EGFTPP++EE
Sbjct: 61  KQQLYQPFRPPPSPIPPKFRSLDTAGKIEVLADRLGLWFEYAPLISSLYTEGFTPPSIEE 120

Query: 121 ITGISGVQQNIFVVGAQVRDSLVQSDDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAK 180
           +TGISGV+QN  +VGAQVRDSLVQS  + P++IA+FDT GAELLYEIRLL+T +R AAA+
Sbjct: 121 LTGISGVEQNSLIVGAQVRDSLVQS-GAKPELIAAFDTNGAELLYEIRLLNTTQRVAAAE 180

Query: 181 YIVENRLDTKGAQDLARAMKDFPRRRGDKGWECFDYDSAGDCLAYMYYRLSREYNNSSER 240
           YIV++  DTKGA DLARA+KDFP RRGD G   FDY+  GDCL++M YR SRE+ + SE 
Sbjct: 181 YIVDHGFDTKGAGDLARAIKDFPHRRGDVGLGDFDYNLPGDCLSFMLYRKSREHRSPSEI 240

Query: 241 RTAALEEALKVVVTEKARDLIVGDLERKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATT 300
           RT  LE+AL+  VTEKA+  ++ +L  + + +   EEEI   +RVPVVR++ GEVA A++
Sbjct: 241 RTTLLEQALETAVTEKAKKAVLRELHGESEEERVKEEEIKI-IRVPVVRLRFGEVAGASS 300

Query: 301 VVVMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVV 360
           VVV+PVCKA EGE+ + EAPME  S GEFGVV AEK WSRWVVLPGW+PV  + K  GV 
Sbjct: 301 VVVLPVCKAEEGEEKLLEAPMEFESGGEFGVVEAEKDWSRWVVLPGWDPVVAVRK--GVA 360

Query: 361 VAFGDAR-VLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGELKVER 420
           V+F D R VLPW      K E I+VV DR +K V A +G+Y +    GG      +K++R
Sbjct: 361 VSFSDDREVLPWN----GKGEAIMVVIDREKKTVEADNGYYYLVVADGG------MKLDR 420

Query: 421 GNALLEKGVKESLGTVLLVVRPPKEMEDD-QLSDEDWD 455
           G  L EKGV ESLG V+LVVRPP++ +D+ Q++DEDWD
Sbjct: 421 GLVLKEKGVNESLGMVVLVVRPPRDDDDEWQINDEDWD 434

BLAST of PI0007274 vs. ExPASy Swiss-Prot
Match: Q9SR19 (Rubisco accumulation factor 1.2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RAF1.2 PE=1 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 3.5e-122
Identity = 234/416 (56.25%), Postives = 305/416 (73.32%), Query Frame = 0

Query: 44  PISAIINPSPSPLAAKQQVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLI 103
           P  +  N  P    A+QQ+YQPFRPP SP+P Q+RSLD+ GK+ +L+ R+ LWFEYAPLI
Sbjct: 46  PKRSSANMIPKNPPARQQLYQPFRPPSSPIPTQFRSLDSAGKIEILAGRMALWFEYAPLI 105

Query: 104 SSLFQEGFTPPTLEEITGISGVQQNIFVVGAQVRDSLVQSDDSDPDVIASFDTGGAELLY 163
           SSL+ +GFTPPT+EE+TGIS ++QN  +VGAQVRDS++QS   +P++I++FDTGGAELLY
Sbjct: 106 SSLYTDGFTPPTIEELTGISSIEQNRLIVGAQVRDSILQS-IHEPELISAFDTGGAELLY 165

Query: 164 EIRLLSTEKRAAAAKYIVENRLDTKGAQDLARAMKDFPRRRGDKGWECFDYDSAGDCLAY 223
           EIRLLST +R AAA +I++  +D+KGAQDLARA+KD+P RRGD GW  FDY+  GDCL++
Sbjct: 166 EIRLLSTTQRVAAATFIIDRNIDSKGAQDLARAIKDYPNRRGDVGWLDFDYNLPGDCLSF 225

Query: 224 MYYRLSREYNNSSERRTAALEEALKVVVTEKARDL----IVGDLERKGDGKDGVEEEIGA 283
           +YYR SRE  N S++RT+ L +AL V  +EKA++     + GD E + + +   +EE   
Sbjct: 226 LYYRQSRENKNPSDQRTSMLLQALGVAESEKAKNRLNTELYGDKEAEKEKEKKKKEEEVK 285

Query: 284 GVRVPVVRMKIGEVAEATTVVVMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRW 343
            +R+PVVR+K GEVAEAT+VVV+PVCKA EGEK + EAPME+ + G+F VV AEKGW RW
Sbjct: 286 AIRIPVVRLKFGEVAEATSVVVLPVCKAEEGEKKILEAPMEIIAGGDFKVVEAEKGWKRW 345

Query: 344 VVLPGWEPVAGLVKGGGVVVAFGDARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYL 403
           VVLP W PVA + KGG  V    D +VLPW      KEEP+LVVADR R  V A DG+YL
Sbjct: 346 VVLPSWNPVAAIGKGGVAVSFRDDRKVLPWD----GKEEPLLVVADRVRNVVEADDGYYL 405

Query: 404 MGGTVGGGDGGGELKVERGNALLEKGVKESLGTVLLVVRPPKEMEDD-QLSDEDWD 455
           +    G       LK+E+G+ L  + VKESLG V+LVVRPP+E +DD Q S ++WD
Sbjct: 406 VVAENG-------LKLEKGSDLKAREVKESLGMVVLVVRPPREDDDDWQTSHQNWD 449

BLAST of PI0007274 vs. ExPASy Swiss-Prot
Match: Q7XDY9 (Rubisco accumulation factor 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RAF1 PE=2 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.8e-97
Identity = 203/415 (48.92%), Postives = 275/415 (66.27%), Query Frame = 0

Query: 52  SPSPLAAKQQVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLFQEGF 111
           +P P A   Q+YQPF PPPSPLP +Y+ LD   +L VL +RLGLW EYAPLIS+L +EGF
Sbjct: 69  TPPPTAPPDQLYQPFHPPPSPLPDKYKDLDLGQRLAVLRDRLGLWHEYAPLISALSREGF 128

Query: 112 TPPTLEEITGISGVQQNIFVVGAQVRDSLVQSDDSDP-DVIASFDT-GGAELLYEIRLLS 171
           TP ++EE TGISGV+QN  VV  QVRDSLV  +   P +++  FD+ GG ELLYE+R L+
Sbjct: 129 TPSSIEEATGISGVEQNSVVVATQVRDSLVADEGGFPAELLRYFDSYGGPELLYELRFLN 188

Query: 172 TEKRAAAAKYIVENRLDTKGAQDLARAMKDFPRRRGDKGWECFDYDSAGDCLAYMYYRLS 231
             +RA AA++ ++ RL+ +G ++LAR+MKDFP+RRGD GWE F  D+ GDCLA+  +R S
Sbjct: 189 ARQRADAARHAIDRRLEPRGVRELARSMKDFPQRRGDDGWEAFTRDNPGDCLAFARFRQS 248

Query: 232 REYNNSSERRTAALEEALKVVVTEKARDLIVGDLER--------KGDGKDGVEEEIGAGV 291
           RE  + +E   A LE AL+VV TE AR  +  +L+R        + D +DG      A  
Sbjct: 249 REAID-AEDSVAELERALEVVDTEPARARVEAELDRARRKAAGEEVDDEDGAANAAAAAS 308

Query: 292 R--VPVVRMKIGEVAEATTVVVMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRW 351
           R  VPVVR+  GEVAEATTV+++PV + G+G + +  AP   R++ + G+V  +KGW+RW
Sbjct: 309 RPAVPVVRLMYGEVAEATTVLLLPVVREGDGGEALAHAPRRTRTDADLGMVEVDKGWTRW 368

Query: 352 VVLPGWEPVAGLVKGGGVVVAFGDARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYL 411
            V+PGW PVA  V G  VV+   D R LPWR     + E +LVVA+R R+EVV  DG Y+
Sbjct: 369 AVVPGWGPVAE-VAGEAVVIELADGRTLPWRS---AEAERVLVVANRGRREVVE-DGIYV 428

Query: 412 MGGTVGGGDGGGELKVERGNALLEKGVKESLGTVLLVVRPPKEMEDDQLSDEDWD 455
           +       +  G L VE+G  L  +GV E+   VL+VVRPP++ EDD +SD++WD
Sbjct: 429 V-------EREGRLVVEKGRKLAAEGVGEAAAEVLVVVRPPRD-EDDMISDDEWD 469

BLAST of PI0007274 vs. ExPASy Swiss-Prot
Match: B4FR29 (Rubisco accumulation factor 1, chloroplastic OS=Zea mays OX=4577 GN=RAF1 PE=1 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 3.4e-93
Identity = 197/416 (47.36%), Postives = 273/416 (65.62%), Query Frame = 0

Query: 52  SPSPLAAKQQVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLFQEGF 111
           +P P+A   Q+YQPF PPPSPLPP  R+LD   +L +L +R+GLW EYAPLISSL ++GF
Sbjct: 62  TPPPMAPPGQLYQPFHPPPSPLPPSLRNLDLSERLQILRDRMGLWHEYAPLISSLSRDGF 121

Query: 112 TPPTLEEITGISGVQQNIFVVGAQVRDSLVQSDDS--DPDVIASFDT-GGAELLYEIRLL 171
            P +++E TGISGV+QN  VV +QVRDSL+    +   PD++  FD+ GG E+LYE+R L
Sbjct: 122 NPSSIQEATGISGVEQNCLVVASQVRDSLLDDRAAAFPPDLLPYFDSLGGPEVLYELRFL 181

Query: 172 STEKRAAAAKYIVENRLDTKGAQDLARAMKDFPRRRGDKGWECFDYDSAGDCLAYMYYRL 231
           +  +RA AA++ +  RL+ KG ++LARAMK FPR RG++GWE F  DS  DCLA+  +R 
Sbjct: 182 NARQRADAARHAIGYRLEPKGVRELARAMKGFPRWRGEEGWEAFSKDSPADCLAFARFRQ 241

Query: 232 SREYNNSSERRTAALEEALKVVVTEKARDLIVGDLE---RKGDGKDGVEEE-----IGAG 291
           SRE  +  + R A LE AL+VV TE  R  +  +LE   RK  G++ V+EE       A 
Sbjct: 242 SREAIDVQD-RVAELERALQVVETESGRARVELELERARRKAAGEEEVDEEGEEDDAAAS 301

Query: 292 VR--VPVVRMKIGEVAEATTVVVMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSR 351
           +R  V VVR++ GEVAEATTV+++PV +  +G   +  AP   +++   GVV  ++ W+R
Sbjct: 302 LRPGVTVVRLRYGEVAEATTVILLPVVRETDGVAAMESAPRRAKTDVGLGVVEVDRAWAR 361

Query: 352 WVVLPGWEPVAGLVKGGGVVVAFGDARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFY 411
           W V+PGW PVA       VVV   D R LPWR++    EEP+LV+A+R +KEVV  +G Y
Sbjct: 362 WAVVPGWGPVAE-AADDAVVVELADGRRLPWRMS---DEEPVLVIANRSKKEVVE-EGVY 421

Query: 412 LMGGTVGGGDGGGELKVERGNALLEKGVKESLGTVLLVVRPPKEMEDDQLSDEDWD 455
           ++       +  G L VERG  L E+G+  +   V++VVRPPK+ EDD +SDE+WD
Sbjct: 422 VL-------EREGRLVVERGKKLAEQGIAAAAAEVVIVVRPPKD-EDDMVSDEEWD 463

BLAST of PI0007274 vs. ExPASy Swiss-Prot
Match: Q8YLP6 (RuBisCO accumulation factor 1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=raf1 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 5.4e-22
Identity = 113/400 (28.25%), Postives = 189/400 (47.25%), Query Frame = 0

Query: 68  PPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLFQEGFTPPTLEEITGISGVQQ 127
           PP +P P    +   +  L  L  + G W E+   I+SL + G+ P  + E TG   VQQ
Sbjct: 5   PPNAPNPENATNELAQELLRKLRQKQGNWVEWGQAIASLQKSGYNPQDIFEATGFEPVQQ 64

Query: 128 NIFVVGAQVRDSLVQSDDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYIVENRLDT 187
           N  +VG+QV +SL +S  S    +A + T G+++LYE+RLL+ E+RAAA      +++D 
Sbjct: 65  NQVIVGSQVYNSLEKSGAS-AATLAHYATRGSDVLYELRLLTHEERAAAGDLTFTHKVDA 124

Query: 188 KGAQDLARAMKDFPR-RRGDKGWECFDYDSAGDCLAYMYYRLSREYNNSSERRTAALEEA 247
             A+++A+A+KDF R R   +G+     +  GD +AY  ++L+R+Y++  E R+  +   
Sbjct: 125 DEAREIAKAIKDFSRFRILPEGFS----NHPGDAVAYQAWKLARQYSDLQE-RSRLIARG 184

Query: 248 LKVVVTEKARDLIVGDLERKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATTVVVMPVCK 307
           L+   +E AR  I   L         V+  + +    P+      +  +    +V PV  
Sbjct: 185 LRFAHSETARKQIEQLL---------VDFTVVSQRPAPIPPFFRFDTEDELPRIV-PV-- 244

Query: 308 AGEGEKGVGEAPMEVR--------SEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVV 367
                  VG+ P++           E E   +V   G   WV LPGW+          V+
Sbjct: 245 -------VGQLPLKAEELKAVPLVEEIEPFRLVKFSGEQAWVALPGWQ----------VL 304

Query: 368 VAFGDARVLPWRVNRWYKEE-----PILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGEL 427
           +A  D   +    +R+ K+      P+LVV DR ++E    D  Y +       D  GEL
Sbjct: 305 LAAEDPVTILATSDRFPKQNQTEPGPVLVVVDRSQRE--WNDFSYFV------VDHDGEL 357

Query: 428 KVERGNALLEKGVKESLGTVLLVVRPPKEMEDDQLSDEDW 454
             +      E  +   LG V+++VR P+ + D+ ++ + W
Sbjct: 365 DFQWFETKPEFPI---LGKVIILVR-PRRILDENVTKDSW 357

BLAST of PI0007274 vs. ExPASy TrEMBL
Match: A0A5D3DZE4 (Rubisco accumulation factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G001420 PE=4 SV=1)

HSP 1 Score: 844.3 bits (2180), Expect = 2.3e-241
Identity = 430/454 (94.71%), Postives = 440/454 (96.92%), Query Frame = 0

Query: 1   MLSSTITNANSLTSLSSIAHTTAIFLHQPRDSPLRFFLHRRPNPISAIINPSPSPLAAKQ 60
           MLSSTITNANSLTSLSSIAHTTAIFLHQP DSPLR FL RR NPISAIINPSPSPLAAKQ
Sbjct: 1   MLSSTITNANSLTSLSSIAHTTAIFLHQPIDSPLRLFLRRRSNPISAIINPSPSPLAAKQ 60

Query: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLFQEGFTPPTLEEIT 120
           QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSL QEGFTPPTLEEIT
Sbjct: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLLQEGFTPPTLEEIT 120

Query: 121 GISGVQQNIFVVGAQVRDSLVQSDDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYI 180
           GISGVQQN FVVGAQVR+SLVQS+DSDPDVIASFDT GAELLYEIRLLSTEKR AAAKYI
Sbjct: 121 GISGVQQNTFVVGAQVRESLVQSNDSDPDVIASFDTSGAELLYEIRLLSTEKRVAAAKYI 180

Query: 181 VENRLDTKGAQDLARAMKDFPRRRGDKGWECFDYDSAGDCLAYMYYRLSREYNNSSERRT 240
           VENRLD+KGAQDLARA+KDFPRR+GD+GWECFDYDSAGDCLAYMYYRLSREYNNSSERRT
Sbjct: 181 VENRLDSKGAQDLARAIKDFPRRKGDRGWECFDYDSAGDCLAYMYYRLSREYNNSSERRT 240

Query: 241 AALEEALKVVVTEKARDLIVGDLERKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATTVV 300
           AALEEALKVVVTEKAR+LIVGDLERKGDGKDGVEEE GAGVRVPVVR+KIGEVAEAT VV
Sbjct: 241 AALEEALKVVVTEKARNLIVGDLERKGDGKDGVEEETGAGVRVPVVRLKIGEVAEATKVV 300

Query: 301 VMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360
           VMPVCKAGEGEKGVGEAPMEVRSEG+FGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA
Sbjct: 301 VMPVCKAGEGEKGVGEAPMEVRSEGDFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360

Query: 361 FGDARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA 420
           F DARVLPWRVNRWYKEEPILVVADR RKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA
Sbjct: 361 FKDARVLPWRVNRWYKEEPILVVADRSRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA 420

Query: 421 LLEKGVKESLGTVLLVVRPPKEMEDDQLSDEDWD 455
           L E GVKESLGTV+LVVRPPKEMEDDQLSDEDWD
Sbjct: 421 LTEMGVKESLGTVVLVVRPPKEMEDDQLSDEDWD 454

BLAST of PI0007274 vs. ExPASy TrEMBL
Match: A0A1S3CHL8 (rubisco accumulation factor 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501013 PE=4 SV=1)

HSP 1 Score: 843.2 bits (2177), Expect = 5.1e-241
Identity = 429/454 (94.49%), Postives = 440/454 (96.92%), Query Frame = 0

Query: 1   MLSSTITNANSLTSLSSIAHTTAIFLHQPRDSPLRFFLHRRPNPISAIINPSPSPLAAKQ 60
           MLSSTITNANSLTSLSSIAHTTAIFLHQP DSPLR FL RR NPISAIINPSPSPLAAKQ
Sbjct: 1   MLSSTITNANSLTSLSSIAHTTAIFLHQPIDSPLRLFLRRRSNPISAIINPSPSPLAAKQ 60

Query: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLFQEGFTPPTLEEIT 120
           QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWF+YAPLISSL QEGFTPPTLEEIT
Sbjct: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFQYAPLISSLLQEGFTPPTLEEIT 120

Query: 121 GISGVQQNIFVVGAQVRDSLVQSDDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYI 180
           GISGVQQN FVVGAQVR+SLVQS+DSDPDVIASFDT GAELLYEIRLLSTEKR AAAKYI
Sbjct: 121 GISGVQQNTFVVGAQVRESLVQSNDSDPDVIASFDTSGAELLYEIRLLSTEKRVAAAKYI 180

Query: 181 VENRLDTKGAQDLARAMKDFPRRRGDKGWECFDYDSAGDCLAYMYYRLSREYNNSSERRT 240
           VENRLD+KGAQDLARA+KDFPRR+GD+GWECFDYDSAGDCLAYMYYRLSREYNNSSERRT
Sbjct: 181 VENRLDSKGAQDLARAIKDFPRRKGDRGWECFDYDSAGDCLAYMYYRLSREYNNSSERRT 240

Query: 241 AALEEALKVVVTEKARDLIVGDLERKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATTVV 300
           AALEEALKVVVTEKAR+LIVGDLERKGDGKDGVEEE GAGVRVPVVR+KIGEVAEAT VV
Sbjct: 241 AALEEALKVVVTEKARNLIVGDLERKGDGKDGVEEETGAGVRVPVVRLKIGEVAEATKVV 300

Query: 301 VMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360
           VMPVCKAGEGEKGVGEAPMEVRSEG+FGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA
Sbjct: 301 VMPVCKAGEGEKGVGEAPMEVRSEGDFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360

Query: 361 FGDARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA 420
           F DARVLPWRVNRWYKEEPILVVADR RKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA
Sbjct: 361 FKDARVLPWRVNRWYKEEPILVVADRSRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA 420

Query: 421 LLEKGVKESLGTVLLVVRPPKEMEDDQLSDEDWD 455
           L E GVKESLGTV+LVVRPPKEMEDDQLSDEDWD
Sbjct: 421 LTEMGVKESLGTVVLVVRPPKEMEDDQLSDEDWD 454

BLAST of PI0007274 vs. ExPASy TrEMBL
Match: A0A5A7VA63 (Rubisco accumulation factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G00440 PE=4 SV=1)

HSP 1 Score: 841.6 bits (2173), Expect = 1.5e-240
Identity = 429/454 (94.49%), Postives = 439/454 (96.70%), Query Frame = 0

Query: 1   MLSSTITNANSLTSLSSIAHTTAIFLHQPRDSPLRFFLHRRPNPISAIINPSPSPLAAKQ 60
           MLSSTITNANSLTSLSSIAHTTAIFLHQP DSPLR FL RR NPISAIINPSPSPLAAKQ
Sbjct: 1   MLSSTITNANSLTSLSSIAHTTAIFLHQPIDSPLRLFLRRRSNPISAIINPSPSPLAAKQ 60

Query: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLFQEGFTPPTLEEIT 120
           QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSL QEGFTPPTLEEIT
Sbjct: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLLQEGFTPPTLEEIT 120

Query: 121 GISGVQQNIFVVGAQVRDSLVQSDDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYI 180
           GISGVQQN FVVGAQVR+SLVQS+DSDPDVIASFDT GAELLYEIRLLSTEKR AAAKYI
Sbjct: 121 GISGVQQNTFVVGAQVRESLVQSNDSDPDVIASFDTSGAELLYEIRLLSTEKRVAAAKYI 180

Query: 181 VENRLDTKGAQDLARAMKDFPRRRGDKGWECFDYDSAGDCLAYMYYRLSREYNNSSERRT 240
           VENRLD+KGAQDLARA+KDFPRR+GD+GWECFDYDSAGDCLAYMYYRLSREYNNSSERRT
Sbjct: 181 VENRLDSKGAQDLARAIKDFPRRKGDRGWECFDYDSAGDCLAYMYYRLSREYNNSSERRT 240

Query: 241 AALEEALKVVVTEKARDLIVGDLERKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATTVV 300
           AALEEALKV VTEKAR+LIVGDLERKGDGKDGVEEE GAGVRVPVVR+KIGEVAEAT VV
Sbjct: 241 AALEEALKVGVTEKARNLIVGDLERKGDGKDGVEEETGAGVRVPVVRLKIGEVAEATKVV 300

Query: 301 VMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360
           VMPVCKAGEGEKGVGEAPMEVRSEG+FGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA
Sbjct: 301 VMPVCKAGEGEKGVGEAPMEVRSEGDFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360

Query: 361 FGDARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA 420
           F DARVLPWRVNRWYKEEPILVVADR RKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA
Sbjct: 361 FKDARVLPWRVNRWYKEEPILVVADRSRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA 420

Query: 421 LLEKGVKESLGTVLLVVRPPKEMEDDQLSDEDWD 455
           L E GVKESLGTV+LVVRPPKEMEDDQLSDEDWD
Sbjct: 421 LTEMGVKESLGTVVLVVRPPKEMEDDQLSDEDWD 454

BLAST of PI0007274 vs. ExPASy TrEMBL
Match: A0A0A0LY43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690280 PE=4 SV=1)

HSP 1 Score: 817.4 bits (2110), Expect = 3.0e-233
Identity = 419/454 (92.29%), Postives = 434/454 (95.59%), Query Frame = 0

Query: 1   MLSSTITNANSLTSLSSIAHTTAIFLHQPRDSPLRFFLHRRPNPISAIINPSPSPLAAKQ 60
           MLSSTITNANSL+SLSSIAHTT+IFLHQPRDSPLR FL RR NPISAIINPS S LAAKQ
Sbjct: 1   MLSSTITNANSLSSLSSIAHTTSIFLHQPRDSPLRLFLRRRLNPISAIINPSSSSLAAKQ 60

Query: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLFQEGFTPPTLEEIT 120
           QVYQPFRPPPSPLPPQYRSLDTEGKLN+LSNRLGLWFEYAPLISSL QEGFTPP LEEIT
Sbjct: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPVLEEIT 120

Query: 121 GISGVQQNIFVVGAQVRDSLVQSDDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYI 180
           GISGVQQN F+VGAQVR+SL+QS+DSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYI
Sbjct: 121 GISGVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYI 180

Query: 181 VENRLDTKGAQDLARAMKDFPRRRGDKGWECFDYDSAGDCLAYMYYRLSREYNNSSERRT 240
           VENRLD+KGAQDLARAMKDFPRRRGDKGWE FDYD AGDCLAYMYYRLSREYN+S+ERRT
Sbjct: 181 VENRLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNSSTERRT 240

Query: 241 AALEEALKVVVTEKARDLIVGDLERKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATTVV 300
           AALEEALKVVVTEKARDLIVGDLE KGDGKDGVEEEIGA V+VPVVRMKIGEVAEATTVV
Sbjct: 241 AALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAAVKVPVVRMKIGEVAEATTVV 300

Query: 301 VMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360
           VMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA
Sbjct: 301 VMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360

Query: 361 FGDARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA 420
           F DARVLPWRVNRWYKEEPILVVADR R+EVVAGDGFYLM    GGGDGGG+LKVERGNA
Sbjct: 361 FEDARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLM----GGGDGGGDLKVERGNA 420

Query: 421 LLEKGVKESLGTVLLVVRPPKEMEDDQLSDEDWD 455
           L+E GVKESLGTVLLVVRPP+E EDDQLSDEDWD
Sbjct: 421 LMEMGVKESLGTVLLVVRPPRETEDDQLSDEDWD 450

BLAST of PI0007274 vs. ExPASy TrEMBL
Match: A0A6J1F451 (rubisco accumulation factor 1.1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111439956 PE=4 SV=1)

HSP 1 Score: 672.5 bits (1734), Expect = 1.2e-189
Identity = 361/458 (78.82%), Postives = 395/458 (86.24%), Query Frame = 0

Query: 1   MLSSTITNANSLTSLSSIAHTTAIF-LHQPRDSPLRFFLHRRPNPISAIIN--PSPSPLA 60
           MLS+T   A SL+  ++ AHTT  F LH P   PLR FL R PNPISA +N  PSPSPL 
Sbjct: 1   MLSAT-APATSLS--AAAAHTTTTFLLHTP---PLRLFLRRPPNPISASLNPSPSPSPLV 60

Query: 61  AKQQVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLFQEGFTPPTLE 120
           AK QVYQPFRPPPSPLP QYRSLD  GKL+VL+NRLGLWFEYAPLISSL QEGFTPPT+E
Sbjct: 61  AKPQVYQPFRPPPSPLPSQYRSLDAAGKLDVLANRLGLWFEYAPLISSLIQEGFTPPTIE 120

Query: 121 EITGISGVQQNIFVVGAQVRDSLVQS-DDSDPDVIASFDTGGAELLYEIRLLSTEKRAAA 180
           EITGI GVQQN  VVGAQVR+SLVQ+ +D+DPD+IA+FDTGGAELLYEIRLL+ EKRAAA
Sbjct: 121 EITGIGGVQQNTLVVGAQVRESLVQTINDADPDLIAAFDTGGAELLYEIRLLNAEKRAAA 180

Query: 181 AKYIVENRLDTKGAQDLARAMKDFPRRRGDKGWECFDYDSAGDCLAYMYYRLSREYNNSS 240
           A+YIVENRLD KGAQDLARAMKDFPRRRGDKGWE F+YD  GDCLA+M+YRLSREY+N S
Sbjct: 181 ARYIVENRLDGKGAQDLARAMKDFPRRRGDKGWESFNYDYPGDCLAFMHYRLSREYSNMS 240

Query: 241 ERRTAALEEALKVVVTEKARDLIVGDLERKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEA 300
           E RTAALE+ALKV VTE+AR LIV DLER+G+GKD VEEEI AGVRVPVVR+KIGEVAEA
Sbjct: 241 EARTAALEDALKVAVTEEARSLIVRDLEREGEGKDEVEEEIEAGVRVPVVRLKIGEVAEA 300

Query: 301 TTVVVMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGG 360
           TTVVV+PVC   EG KGVGEAPMEVRSEGEFGVVVAE+GW RWVVLPGWEP+AGL K GG
Sbjct: 301 TTVVVLPVCNGEEGGKGVGEAPMEVRSEGEFGVVVAEEGWRRWVVLPGWEPIAGLGK-GG 360

Query: 361 VVVAFGDARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGELKVE 420
           VVVAF DAR LPWRVNRWYKEE ILVVADR RKEV AGDGFYL G T  G D  GELKV+
Sbjct: 361 VVVAFKDARALPWRVNRWYKEEAILVVADRSRKEVEAGDGFYLTGAT--GSD--GELKVQ 420

Query: 421 RGNALLEKGVKESLGTVLLVVRPPKEMEDDQLSDEDWD 455
           RG+ L+E G+KESLGTVLLVVRPPK+M+DDQLSDEDWD
Sbjct: 421 RGSELMEMGLKESLGTVLLVVRPPKDMDDDQLSDEDWD 447

BLAST of PI0007274 vs. NCBI nr
Match: TYK28779.1 (rubisco accumulation factor 1 [Cucumis melo var. makuwa])

HSP 1 Score: 844.3 bits (2180), Expect = 4.7e-241
Identity = 430/454 (94.71%), Postives = 440/454 (96.92%), Query Frame = 0

Query: 1   MLSSTITNANSLTSLSSIAHTTAIFLHQPRDSPLRFFLHRRPNPISAIINPSPSPLAAKQ 60
           MLSSTITNANSLTSLSSIAHTTAIFLHQP DSPLR FL RR NPISAIINPSPSPLAAKQ
Sbjct: 1   MLSSTITNANSLTSLSSIAHTTAIFLHQPIDSPLRLFLRRRSNPISAIINPSPSPLAAKQ 60

Query: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLFQEGFTPPTLEEIT 120
           QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSL QEGFTPPTLEEIT
Sbjct: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLLQEGFTPPTLEEIT 120

Query: 121 GISGVQQNIFVVGAQVRDSLVQSDDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYI 180
           GISGVQQN FVVGAQVR+SLVQS+DSDPDVIASFDT GAELLYEIRLLSTEKR AAAKYI
Sbjct: 121 GISGVQQNTFVVGAQVRESLVQSNDSDPDVIASFDTSGAELLYEIRLLSTEKRVAAAKYI 180

Query: 181 VENRLDTKGAQDLARAMKDFPRRRGDKGWECFDYDSAGDCLAYMYYRLSREYNNSSERRT 240
           VENRLD+KGAQDLARA+KDFPRR+GD+GWECFDYDSAGDCLAYMYYRLSREYNNSSERRT
Sbjct: 181 VENRLDSKGAQDLARAIKDFPRRKGDRGWECFDYDSAGDCLAYMYYRLSREYNNSSERRT 240

Query: 241 AALEEALKVVVTEKARDLIVGDLERKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATTVV 300
           AALEEALKVVVTEKAR+LIVGDLERKGDGKDGVEEE GAGVRVPVVR+KIGEVAEAT VV
Sbjct: 241 AALEEALKVVVTEKARNLIVGDLERKGDGKDGVEEETGAGVRVPVVRLKIGEVAEATKVV 300

Query: 301 VMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360
           VMPVCKAGEGEKGVGEAPMEVRSEG+FGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA
Sbjct: 301 VMPVCKAGEGEKGVGEAPMEVRSEGDFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360

Query: 361 FGDARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA 420
           F DARVLPWRVNRWYKEEPILVVADR RKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA
Sbjct: 361 FKDARVLPWRVNRWYKEEPILVVADRSRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA 420

Query: 421 LLEKGVKESLGTVLLVVRPPKEMEDDQLSDEDWD 455
           L E GVKESLGTV+LVVRPPKEMEDDQLSDEDWD
Sbjct: 421 LTEMGVKESLGTVVLVVRPPKEMEDDQLSDEDWD 454

BLAST of PI0007274 vs. NCBI nr
Match: XP_008462710.1 (PREDICTED: rubisco accumulation factor 1, chloroplastic [Cucumis melo])

HSP 1 Score: 843.2 bits (2177), Expect = 1.1e-240
Identity = 429/454 (94.49%), Postives = 440/454 (96.92%), Query Frame = 0

Query: 1   MLSSTITNANSLTSLSSIAHTTAIFLHQPRDSPLRFFLHRRPNPISAIINPSPSPLAAKQ 60
           MLSSTITNANSLTSLSSIAHTTAIFLHQP DSPLR FL RR NPISAIINPSPSPLAAKQ
Sbjct: 1   MLSSTITNANSLTSLSSIAHTTAIFLHQPIDSPLRLFLRRRSNPISAIINPSPSPLAAKQ 60

Query: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLFQEGFTPPTLEEIT 120
           QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWF+YAPLISSL QEGFTPPTLEEIT
Sbjct: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFQYAPLISSLLQEGFTPPTLEEIT 120

Query: 121 GISGVQQNIFVVGAQVRDSLVQSDDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYI 180
           GISGVQQN FVVGAQVR+SLVQS+DSDPDVIASFDT GAELLYEIRLLSTEKR AAAKYI
Sbjct: 121 GISGVQQNTFVVGAQVRESLVQSNDSDPDVIASFDTSGAELLYEIRLLSTEKRVAAAKYI 180

Query: 181 VENRLDTKGAQDLARAMKDFPRRRGDKGWECFDYDSAGDCLAYMYYRLSREYNNSSERRT 240
           VENRLD+KGAQDLARA+KDFPRR+GD+GWECFDYDSAGDCLAYMYYRLSREYNNSSERRT
Sbjct: 181 VENRLDSKGAQDLARAIKDFPRRKGDRGWECFDYDSAGDCLAYMYYRLSREYNNSSERRT 240

Query: 241 AALEEALKVVVTEKARDLIVGDLERKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATTVV 300
           AALEEALKVVVTEKAR+LIVGDLERKGDGKDGVEEE GAGVRVPVVR+KIGEVAEAT VV
Sbjct: 241 AALEEALKVVVTEKARNLIVGDLERKGDGKDGVEEETGAGVRVPVVRLKIGEVAEATKVV 300

Query: 301 VMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360
           VMPVCKAGEGEKGVGEAPMEVRSEG+FGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA
Sbjct: 301 VMPVCKAGEGEKGVGEAPMEVRSEGDFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360

Query: 361 FGDARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA 420
           F DARVLPWRVNRWYKEEPILVVADR RKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA
Sbjct: 361 FKDARVLPWRVNRWYKEEPILVVADRSRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA 420

Query: 421 LLEKGVKESLGTVLLVVRPPKEMEDDQLSDEDWD 455
           L E GVKESLGTV+LVVRPPKEMEDDQLSDEDWD
Sbjct: 421 LTEMGVKESLGTVVLVVRPPKEMEDDQLSDEDWD 454

BLAST of PI0007274 vs. NCBI nr
Match: KAA0062559.1 (rubisco accumulation factor 1 [Cucumis melo var. makuwa])

HSP 1 Score: 841.6 bits (2173), Expect = 3.1e-240
Identity = 429/454 (94.49%), Postives = 439/454 (96.70%), Query Frame = 0

Query: 1   MLSSTITNANSLTSLSSIAHTTAIFLHQPRDSPLRFFLHRRPNPISAIINPSPSPLAAKQ 60
           MLSSTITNANSLTSLSSIAHTTAIFLHQP DSPLR FL RR NPISAIINPSPSPLAAKQ
Sbjct: 1   MLSSTITNANSLTSLSSIAHTTAIFLHQPIDSPLRLFLRRRSNPISAIINPSPSPLAAKQ 60

Query: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLFQEGFTPPTLEEIT 120
           QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSL QEGFTPPTLEEIT
Sbjct: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLLQEGFTPPTLEEIT 120

Query: 121 GISGVQQNIFVVGAQVRDSLVQSDDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYI 180
           GISGVQQN FVVGAQVR+SLVQS+DSDPDVIASFDT GAELLYEIRLLSTEKR AAAKYI
Sbjct: 121 GISGVQQNTFVVGAQVRESLVQSNDSDPDVIASFDTSGAELLYEIRLLSTEKRVAAAKYI 180

Query: 181 VENRLDTKGAQDLARAMKDFPRRRGDKGWECFDYDSAGDCLAYMYYRLSREYNNSSERRT 240
           VENRLD+KGAQDLARA+KDFPRR+GD+GWECFDYDSAGDCLAYMYYRLSREYNNSSERRT
Sbjct: 181 VENRLDSKGAQDLARAIKDFPRRKGDRGWECFDYDSAGDCLAYMYYRLSREYNNSSERRT 240

Query: 241 AALEEALKVVVTEKARDLIVGDLERKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATTVV 300
           AALEEALKV VTEKAR+LIVGDLERKGDGKDGVEEE GAGVRVPVVR+KIGEVAEAT VV
Sbjct: 241 AALEEALKVGVTEKARNLIVGDLERKGDGKDGVEEETGAGVRVPVVRLKIGEVAEATKVV 300

Query: 301 VMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360
           VMPVCKAGEGEKGVGEAPMEVRSEG+FGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA
Sbjct: 301 VMPVCKAGEGEKGVGEAPMEVRSEGDFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360

Query: 361 FGDARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA 420
           F DARVLPWRVNRWYKEEPILVVADR RKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA
Sbjct: 361 FKDARVLPWRVNRWYKEEPILVVADRSRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA 420

Query: 421 LLEKGVKESLGTVLLVVRPPKEMEDDQLSDEDWD 455
           L E GVKESLGTV+LVVRPPKEMEDDQLSDEDWD
Sbjct: 421 LTEMGVKESLGTVVLVVRPPKEMEDDQLSDEDWD 454

BLAST of PI0007274 vs. NCBI nr
Match: XP_004142574.1 (rubisco accumulation factor 1.1, chloroplastic [Cucumis sativus] >KGN66790.1 hypothetical protein Csa_007640 [Cucumis sativus])

HSP 1 Score: 817.4 bits (2110), Expect = 6.2e-233
Identity = 419/454 (92.29%), Postives = 434/454 (95.59%), Query Frame = 0

Query: 1   MLSSTITNANSLTSLSSIAHTTAIFLHQPRDSPLRFFLHRRPNPISAIINPSPSPLAAKQ 60
           MLSSTITNANSL+SLSSIAHTT+IFLHQPRDSPLR FL RR NPISAIINPS S LAAKQ
Sbjct: 1   MLSSTITNANSLSSLSSIAHTTSIFLHQPRDSPLRLFLRRRLNPISAIINPSSSSLAAKQ 60

Query: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLFQEGFTPPTLEEIT 120
           QVYQPFRPPPSPLPPQYRSLDTEGKLN+LSNRLGLWFEYAPLISSL QEGFTPP LEEIT
Sbjct: 61  QVYQPFRPPPSPLPPQYRSLDTEGKLNILSNRLGLWFEYAPLISSLLQEGFTPPVLEEIT 120

Query: 121 GISGVQQNIFVVGAQVRDSLVQSDDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYI 180
           GISGVQQN F+VGAQVR+SL+QS+DSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYI
Sbjct: 121 GISGVQQNSFIVGAQVRESLLQSNDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYI 180

Query: 181 VENRLDTKGAQDLARAMKDFPRRRGDKGWECFDYDSAGDCLAYMYYRLSREYNNSSERRT 240
           VENRLD+KGAQDLARAMKDFPRRRGDKGWE FDYD AGDCLAYMYYRLSREYN+S+ERRT
Sbjct: 181 VENRLDSKGAQDLARAMKDFPRRRGDKGWEYFDYDFAGDCLAYMYYRLSREYNSSTERRT 240

Query: 241 AALEEALKVVVTEKARDLIVGDLERKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATTVV 300
           AALEEALKVVVTEKARDLIVGDLE KGDGKDGVEEEIGA V+VPVVRMKIGEVAEATTVV
Sbjct: 241 AALEEALKVVVTEKARDLIVGDLEGKGDGKDGVEEEIGAAVKVPVVRMKIGEVAEATTVV 300

Query: 301 VMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360
           VMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA
Sbjct: 301 VMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVA 360

Query: 361 FGDARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNA 420
           F DARVLPWRVNRWYKEEPILVVADR R+EVVAGDGFYLM    GGGDGGG+LKVERGNA
Sbjct: 361 FEDARVLPWRVNRWYKEEPILVVADRSRREVVAGDGFYLM----GGGDGGGDLKVERGNA 420

Query: 421 LLEKGVKESLGTVLLVVRPPKEMEDDQLSDEDWD 455
           L+E GVKESLGTVLLVVRPP+E EDDQLSDEDWD
Sbjct: 421 LMEMGVKESLGTVLLVVRPPRETEDDQLSDEDWD 450

BLAST of PI0007274 vs. NCBI nr
Match: XP_038880540.1 (rubisco accumulation factor 1.1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 770.8 bits (1989), Expect = 6.7e-219
Identity = 395/451 (87.58%), Postives = 413/451 (91.57%), Query Frame = 0

Query: 4   STITNANSLTSLSSIAHTTAIFLHQPRDSPLRFFLHRRPNPISAIINPSPSPLAAKQQVY 63
           ST T ANSLTSLS+ AHTTA FLH PRDS LR FL RRPN ISA +N  PSPLAAKQQVY
Sbjct: 3   STTTTANSLTSLSAAAHTTATFLHPPRDSSLRLFLRRRPNSISATLN--PSPLAAKQQVY 62

Query: 64  QPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLFQEGFTPPTLEEITGIS 123
           QPFRPPPSPLP QYRSLD EGKLNVLSNRLGLWFEYAPLISSL QEGFTPPTLEEITGI+
Sbjct: 63  QPFRPPPSPLPSQYRSLDAEGKLNVLSNRLGLWFEYAPLISSLIQEGFTPPTLEEITGIT 122

Query: 124 GVQQNIFVVGAQVRDSLVQSDDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAKYIVEN 183
           GVQQNIFVVGAQVR+SLVQS+++DPDVIA+FDT GAELLYEIRLLSTEKRAAAA+YIVEN
Sbjct: 123 GVQQNIFVVGAQVRESLVQSNNADPDVIAAFDTSGAELLYEIRLLSTEKRAAAARYIVEN 182

Query: 184 RLDTKGAQDLARAMKDFPRRRGDKGWECFDYDSAGDCLAYMYYRLSREYNNSSERRTAAL 243
           RLD KGAQDLARA+KDFPRRRGDKGWECFDY+  GDCLAYMYYRLSREYNN SE RTAAL
Sbjct: 183 RLDIKGAQDLARALKDFPRRRGDKGWECFDYEEPGDCLAYMYYRLSREYNNPSEPRTAAL 242

Query: 244 EEALKVVVTEKARDLIVGDLERKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATTVVVMP 303
           EEALKVVVTEKARDLIVGDLE KGDGK+GVEEEI  G+RVPVVRMKIGEVAEATTV+VMP
Sbjct: 243 EEALKVVVTEKARDLIVGDLEGKGDGKEGVEEEIEVGIRVPVVRMKIGEVAEATTVLVMP 302

Query: 304 VCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVVVAFGD 363
           VCKAGEGEKGVGEAPME+RSEGEFGVVVAEK W +WVVLPGWEPV GLVKGGGVVVAF D
Sbjct: 303 VCKAGEGEKGVGEAPMELRSEGEFGVVVAEKEWRKWVVLPGWEPVVGLVKGGGVVVAFED 362

Query: 364 ARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGELKVERGNALLE 423
           AR LPWRVNRWYKEEPILVV DR RKEVVAGDGFYL G TV    GGGELKV+RGNAL+E
Sbjct: 363 ARALPWRVNRWYKEEPILVVVDRSRKEVVAGDGFYLTGATV----GGGELKVQRGNALME 422

Query: 424 KGVKESLGTVLLVVRPPKEMEDDQLSDEDWD 455
            GVKESLGTVLLVVRPPKEMEDDQLSDEDWD
Sbjct: 423 MGVKESLGTVLLVVRPPKEMEDDQLSDEDWD 447

BLAST of PI0007274 vs. TAIR 10
Match: AT5G28500.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04550.1); Has 109 Blast hits to 109 proteins in 49 species: Archae - 0; Bacteria - 67; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 449.5 bits (1155), Expect = 3.2e-126
Identity = 258/458 (56.33%), Postives = 330/458 (72.05%), Query Frame = 0

Query: 1   MLSSTITNANSLTSLSSIAHTTAIFLHQPRDSPLRFFLHRRP--NPISAIINPSPSPLAA 60
           MLS T T  +S  S+ + + T   F  +P        ++R+P     SA+I  S      
Sbjct: 1   MLSLTATTLSS--SIFTQSKTHGFFNTRP--------VYRKPFTTITSALIPASNRQAPP 60

Query: 61  KQQVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLFQEGFTPPTLEE 120
           KQQ+YQPFRPPPSP+PP++RSLDT GK+ VL++RLGLWFEYAPLISSL+ EGFTPP++EE
Sbjct: 61  KQQLYQPFRPPPSPIPPKFRSLDTAGKIEVLADRLGLWFEYAPLISSLYTEGFTPPSIEE 120

Query: 121 ITGISGVQQNIFVVGAQVRDSLVQSDDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAK 180
           +TGISGV+QN  +VGAQVRDSLVQS  + P++IA+FDT GAELLYEIRLL+T +R AAA+
Sbjct: 121 LTGISGVEQNSLIVGAQVRDSLVQS-GAKPELIAAFDTNGAELLYEIRLLNTTQRVAAAE 180

Query: 181 YIVENRLDTKGAQDLARAMKDFPRRRGDKGWECFDYDSAGDCLAYMYYRLSREYNNSSER 240
           YIV++  DTKGA DLARA+KDFP RRGD G   FDY+  GDCL++M YR SRE+ + SE 
Sbjct: 181 YIVDHGFDTKGAGDLARAIKDFPHRRGDVGLGDFDYNLPGDCLSFMLYRKSREHRSPSEI 240

Query: 241 RTAALEEALKVVVTEKARDLIVGDLERKGDGKDGVEEEIGAGVRVPVVRMKIGEVAEATT 300
           RT  LE+AL+  VTEKA+  ++ +L  + + +   EEEI   +RVPVVR++ GEVA A++
Sbjct: 241 RTTLLEQALETAVTEKAKKAVLRELHGESEEERVKEEEIKI-IRVPVVRLRFGEVAGASS 300

Query: 301 VVVMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRWVVLPGWEPVAGLVKGGGVV 360
           VVV+PVCKA EGE+ + EAPME  S GEFGVV AEK WSRWVVLPGW+PV  + K  GV 
Sbjct: 301 VVVLPVCKAEEGEEKLLEAPMEFESGGEFGVVEAEKDWSRWVVLPGWDPVVAVRK--GVA 360

Query: 361 VAFGDAR-VLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYLMGGTVGGGDGGGELKVER 420
           V+F D R VLPW      K E I+VV DR +K V A +G+Y +    GG      +K++R
Sbjct: 361 VSFSDDREVLPWN----GKGEAIMVVIDREKKTVEADNGYYYLVVADGG------MKLDR 420

Query: 421 GNALLEKGVKESLGTVLLVVRPPKEMEDD-QLSDEDWD 455
           G  L EKGV ESLG V+LVVRPP++ +D+ Q++DEDWD
Sbjct: 421 GLVLKEKGVNESLGMVVLVVRPPRDDDDEWQINDEDWD 434

BLAST of PI0007274 vs. TAIR 10
Match: AT3G04550.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28500.1); Has 110 Blast hits to 110 proteins in 51 species: Archae - 0; Bacteria - 67; Metazoa - 1; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 439.9 bits (1130), Expect = 2.5e-123
Identity = 234/416 (56.25%), Postives = 305/416 (73.32%), Query Frame = 0

Query: 44  PISAIINPSPSPLAAKQQVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLI 103
           P  +  N  P    A+QQ+YQPFRPP SP+P Q+RSLD+ GK+ +L+ R+ LWFEYAPLI
Sbjct: 46  PKRSSANMIPKNPPARQQLYQPFRPPSSPIPTQFRSLDSAGKIEILAGRMALWFEYAPLI 105

Query: 104 SSLFQEGFTPPTLEEITGISGVQQNIFVVGAQVRDSLVQSDDSDPDVIASFDTGGAELLY 163
           SSL+ +GFTPPT+EE+TGIS ++QN  +VGAQVRDS++QS   +P++I++FDTGGAELLY
Sbjct: 106 SSLYTDGFTPPTIEELTGISSIEQNRLIVGAQVRDSILQS-IHEPELISAFDTGGAELLY 165

Query: 164 EIRLLSTEKRAAAAKYIVENRLDTKGAQDLARAMKDFPRRRGDKGWECFDYDSAGDCLAY 223
           EIRLLST +R AAA +I++  +D+KGAQDLARA+KD+P RRGD GW  FDY+  GDCL++
Sbjct: 166 EIRLLSTTQRVAAATFIIDRNIDSKGAQDLARAIKDYPNRRGDVGWLDFDYNLPGDCLSF 225

Query: 224 MYYRLSREYNNSSERRTAALEEALKVVVTEKARDL----IVGDLERKGDGKDGVEEEIGA 283
           +YYR SRE  N S++RT+ L +AL V  +EKA++     + GD E + + +   +EE   
Sbjct: 226 LYYRQSRENKNPSDQRTSMLLQALGVAESEKAKNRLNTELYGDKEAEKEKEKKKKEEEVK 285

Query: 284 GVRVPVVRMKIGEVAEATTVVVMPVCKAGEGEKGVGEAPMEVRSEGEFGVVVAEKGWSRW 343
            +R+PVVR+K GEVAEAT+VVV+PVCKA EGEK + EAPME+ + G+F VV AEKGW RW
Sbjct: 286 AIRIPVVRLKFGEVAEATSVVVLPVCKAEEGEKKILEAPMEIIAGGDFKVVEAEKGWKRW 345

Query: 344 VVLPGWEPVAGLVKGGGVVVAFGDARVLPWRVNRWYKEEPILVVADRRRKEVVAGDGFYL 403
           VVLP W PVA + KGG  V    D +VLPW      KEEP+LVVADR R  V A DG+YL
Sbjct: 346 VVLPSWNPVAAIGKGGVAVSFRDDRKVLPWD----GKEEPLLVVADRVRNVVEADDGYYL 405

Query: 404 MGGTVGGGDGGGELKVERGNALLEKGVKESLGTVLLVVRPPKEMEDD-QLSDEDWD 455
           +    G       LK+E+G+ L  + VKESLG V+LVVRPP+E +DD Q S ++WD
Sbjct: 406 VVAENG-------LKLEKGSDLKAREVKESLGMVVLVVRPPREDDDDWQTSHQNWD 449

BLAST of PI0007274 vs. TAIR 10
Match: AT5G28500.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04550.1). )

HSP 1 Score: 282.0 bits (720), Expect = 8.7e-76
Identity = 156/277 (56.32%), Postives = 203/277 (73.29%), Query Frame = 0

Query: 1   MLSSTITNANSLTSLSSIAHTTAIFLHQPRDSPLRFFLHRRP--NPISAIINPSPSPLAA 60
           MLS T T  +S  S+ + + T   F  +P        ++R+P     SA+I  S      
Sbjct: 1   MLSLTATTLSS--SIFTQSKTHGFFNTRP--------VYRKPFTTITSALIPASNRQAPP 60

Query: 61  KQQVYQPFRPPPSPLPPQYRSLDTEGKLNVLSNRLGLWFEYAPLISSLFQEGFTPPTLEE 120
           KQQ+YQPFRPPPSP+PP++RSLDT GK+ VL++RLGLWFEYAPLISSL+ EGFTPP++EE
Sbjct: 61  KQQLYQPFRPPPSPIPPKFRSLDTAGKIEVLADRLGLWFEYAPLISSLYTEGFTPPSIEE 120

Query: 121 ITGISGVQQNIFVVGAQVRDSLVQSDDSDPDVIASFDTGGAELLYEIRLLSTEKRAAAAK 180
           +TGISGV+QN  +VGAQVRDSLVQS  + P++IA+FDT GAELLYEIRLL+T +R AAA+
Sbjct: 121 LTGISGVEQNSLIVGAQVRDSLVQS-GAKPELIAAFDTNGAELLYEIRLLNTTQRVAAAE 180

Query: 181 YIVENRLDTKGAQDLARAMKDFPRRRGDKGWECFDYDSAGDCLAYMYYRLSREYNNSSER 240
           YIV++  DTKGA DLARA+KDFP RRGD G   FDY+  GDCL++M YR SRE+ + SE 
Sbjct: 181 YIVDHGFDTKGAGDLARAIKDFPHRRGDVGLGDFDYNLPGDCLSFMLYRKSREHRSPSEI 240

Query: 241 RTAALEEALKVVVTEKARDLIVGDLERKGDGKDGVEE 276
           RT  LE+AL+  VTEKA+  ++ +L  + + + G E+
Sbjct: 241 RTTLLEQALETAVTEKAKKAVLRELHGESEEERGKED 266

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LKR84.5e-12556.33Rubisco accumulation factor 1.1, chloroplastic OS=Arabidopsis thaliana OX=3702 G... [more]
Q9SR193.5e-12256.25Rubisco accumulation factor 1.2, chloroplastic OS=Arabidopsis thaliana OX=3702 G... [more]
Q7XDY91.8e-9748.92Rubisco accumulation factor 1, chloroplastic OS=Oryza sativa subsp. japonica OX=... [more]
B4FR293.4e-9347.36Rubisco accumulation factor 1, chloroplastic OS=Zea mays OX=4577 GN=RAF1 PE=1 SV... [more]
Q8YLP65.4e-2228.25RuBisCO accumulation factor 1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX ... [more]
Match NameE-valueIdentityDescription
A0A5D3DZE42.3e-24194.71Rubisco accumulation factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
A0A1S3CHL85.1e-24194.49rubisco accumulation factor 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10350... [more]
A0A5A7VA631.5e-24094.49Rubisco accumulation factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A0A0LY433.0e-23392.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690280 PE=4 SV=1[more]
A0A6J1F4511.2e-18978.82rubisco accumulation factor 1.1, chloroplastic-like OS=Cucurbita moschata OX=366... [more]
Match NameE-valueIdentityDescription
TYK28779.14.7e-24194.71rubisco accumulation factor 1 [Cucumis melo var. makuwa][more]
XP_008462710.11.1e-24094.49PREDICTED: rubisco accumulation factor 1, chloroplastic [Cucumis melo][more]
KAA0062559.13.1e-24094.49rubisco accumulation factor 1 [Cucumis melo var. makuwa][more]
XP_004142574.16.2e-23392.29rubisco accumulation factor 1.1, chloroplastic [Cucumis sativus] >KGN66790.1 hyp... [more]
XP_038880540.16.7e-21987.58rubisco accumulation factor 1.1, chloroplastic-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
AT5G28500.13.2e-12656.33unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G04550.12.5e-12356.25unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas... [more]
AT5G28500.28.7e-7656.32unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040781Rubisco accumulation factor 1, helix turn helix domainPFAMPF18579Raf1_HTHcoord: 81..141
e-value: 2.0E-22
score: 78.6
IPR041358Rubisco accumulation factor 1, alpha helical domainPFAMPF18578Raf1_Ncoord: 154..260
e-value: 8.0E-36
score: 122.8
IPR040858Rubisco accumulation factor 1, C-terminalPFAMPF18087RuBisCo_chap_Ccoord: 283..441
e-value: 3.9E-33
score: 114.1
IPR037494Rubisco accumulation factor 1PANTHERPTHR35299FAMILY NOT NAMEDcoord: 1..454
NoneNo IPR availablePANTHERPTHR35299:SF3RUBISCO ACCUMULATION FACTOR 1.2, CHLOROPLASTICcoord: 1..454

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0007274.1PI0007274.1mRNA