PI0007043 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTTATAGTATCATTCATTTAAGGTTGACTTATGTTGGACCTTTGGCCCCCAAATTTTTATCACAAGCTCGGCCTCATGTATGGCCAAAGCCGATCAGGCCCATGCTCTTCCTTGATCCATTATTTCGTTTTCTCTCGTTATCCTATTCTACCCTTGGTTATACAATCCACAACAACAACAAAAGCATAAAGCTTAAATACTATGAACTAAGATTCAATTGACTATCACATCAAAATTAATTAACATTAATTAATGTAATACAAAATTAATTAAATAGATATTAAATATATATTTTTAAAAAATATATTTTTGAATTGTTCTAAAAATATATCTTTTTAAAAGAATATAATATTTTTTTGGAGCATTGCATAAATTTATTCATAGAAATATTGGTAGATTTAATATAAATTGATTCTTTTAGGAAAAAAATGAAATTCTAATACCTTTGCCAACATTGATAATTTAATCATTGTATTAAATGTATTAAATACAAATTTATTAATGAAGGAAAATAAAAATGTTAAAATCACATTTTAATCTTTATCCTTTAACATAATTTAGAATGTTTTAGGTTAGTTTATATATTTTTAACAATAATAATATAATGAATTTTTGGGGTCTCTTCGTGGTTCATTAATAGGCAAAAAAAAAAAAAAAAAAAAAACTATGCAACTCTATTTCCATCATCTCAGAAAATATAGAAATTTATTATTGTTATTAAGATTATTTTTAAATACAGTAAAATAAACTAAAATATTAATACAATATTAACAAAATATCACTATCTTTTAATCAATAGATTAAGATATTTTTGCTATATTTATATATATATATATATATATATTTATTTATTTATTTATTTGAAGTTTCATCATTTAAAATAATTTTTATTTTATTTTCTTTTCTTCTTTTTTTTTTTTTTGTTTTTTTAAGACTTGGCTCTGTTTTGAAATTCCATAAACATTTTGGCTCCATTTCCCAAAACTTACACATATAAATGCCGCCGAAGAACGTGCAAATATTATGATCACCGTTATTGGCCTTTGTCCGAGTTGAAAACGAAGAAGCTGCCTCTGATTTTGCCGTCACGTTTCGCCGTCAGCCGGATCTCTGCGTTTTGTGGTGCGTCCTCTCCTCTCTCGGTTCTTTCTCTATTCTAATTTCAGAGGATGATTGAATCTTTAACACTAGAATTTGTCATTCATTTCCGTTCATCAAGATTACGAATCTCTTTTTTCTAATATAGGTATACGTTTTGCCATTCTCAGTTAAAGTTTCATTGCTGTTTAGACATTTAGTTAGGGCCTAATTGCCCCTCTCTGTTCTAAAAAACTGCTGATTATTATAGATCATACAAACTAGAATTTGATGCAGTTTTTGGAATTTAAATTAAAATGTTCTGATGTTCACAGCCTCGTAAATTGTATTTCTAAATTTAAACCATGTTTGATTAATTGGTAAACTTGATAGAAACCATGAAATACACGAGTGTATTCATGTGTTTTGTGAGTTACATCATGTGGACAATTTTCTAATGTTATAGACTAAATCAAGTAAAAGTGAATGAAGGAATTTCTTGTGTGATACCTTATTCAAATTCTTCTTTCTTAAGGTTATCAATTTTATGTATATGTAGTTGCTGGCTTTGAATTTCCCCTTCTTTTCCCATACTTCTGATGCCTTGCAATTTGGTTGTGTAGTTTGCTGTGTGGTTTGGTATTTTGATTAATTAGTGTAGCTTCACTAGCGGTTTTTGTAATATCATTCTTGTAGATTTAGTTTTTGATCTTGATCTACTCGTTTCCATATATTGTAGGTTGGACAAATCTTTAACTCGAAGCATGTCTGGAGAAGAGGAAGAAAATGCCGCAGAGCTTAAAATTGGGGATGGTACCATATTTTCCCATAGATCTCTAATTTTCTATCAATATTCAATTCATTGAGATTTTAAGTCACTAACATTCTATGGCAATGTGTTTGCATCGTATATTTGCAATTTTTTAATCTATTGAGCAATTCATGTGTTTGATCTTTTAATTTGCTTAAAAGTGTGAAACTTAATTCATTATGTTGTTCCCCATGCCTTAATGTACCCTTGTTGCACATTCTTTGAACTTTTTATTTGCCAATGTGGAGATTGTTTTTATGTTTTTAACAATGCATTTAGCTTGTAGTGGGAATGTGCAGTCAATGTAAACATTAATTACTCTTAAAGAAATTTTGTGCTTAGAGTGGTAACTTGAAGAAAAATCTTCTGTTTTTTTGCTAAGAAATCGAGATTTAATTGAGAAAAGTGAAAGTGTACCAGTGCATACAACCAAGCTCACAAGAGGAGTCGACGATTATAATGCAAAGAAGTTGCAATCTCTTTCATTAAATCACTACCTAGTAGATGGTTGTTTTGCTTAGTCGGGAGAGGAGAAATATAGTAAACTTCCTTGTTTCTTTAAGGCCATTAGTTTATGTGGTTACATCTTGTACCCCTCTATTTAGGATCGTAGAATCTCTTAACCGTTTCAGATATCGTTAGGTAAGAAATAGCCATTAGATAGGTAGTTGGACGTCCACGTTTATGAAAAGAAGTTTTGTTTGCATGCACCTTCCATTTTTGTTTATGCTATCATGCTATTATTTTCCGAATGCATGTTCTTAATATTTTTAGTTGGTTCACTTACTAATTTGAAACGTCACTTCCTTAATGATGTGAAAATTTGGCCAATTGGATCTAAAAAGCCCTAGTCCTTGTGACATGATTAAGACACCTCACTTCATTCTTGTTTAAGGTTGAAATAGGAAAATGTGAGTGTTTATCTCCGCAAAATCTTAATTCTAATCTATAATCGTTTTGTCAGTAAGACACTAAAACTATTGCTAGGTTTTCCAGGATAATGCTTAAGGCCTGAGACTAGCCAAATCTTTGTGATTTATATGGATAAGTAATTATTCAAAATTTAAGCATTTGCCATCAAAAATCTTTTTGGGGAGTACTCTTGCAGCCTTTTCATTTTCTTGTATTTATCTTGCTCTTTGTGCTCTTTGTGCTAGGGTCCATGAAGAGAAAATATAAGGCATCATAATTAACACTTTCTTTGTCTACTTGCAGAGTTCTTAAAAGCTAAGTGTTTAATGAATTGTGAAGTTTCCTTGATCCTGGAACACAAGTATGAGCAGCTTCAACAAAGGGCTGAGGATCCAACAAATCAAGTTTCTCAGTGAGATTTATGTTTATTCTTTATTGATTCATAAGTTAAGTTAGAGTTTCTCTTCTTTGTTGAAATAGCTAAAATGTATAGTTTTATTACGATATTCATTCTCACTTGCCATACAATAACAATGGATTTTTATTTTGGTCTTCTTTTGCAGAGTGTTTGAAAAGTCACTGCAGTATGTGAAACGTTTCAGTCGCTATAAGAACCCCGATGCTGTTAGACAAGTCCGAGAGTATCCTTTCTTATATCATTGATTCACCCAAAAGCTTAAGTTAGTAGGTAAAGGCAAATTTAATATAATATCTAACATAAACTATATACATTAATGTTTTTTATTTTATGGATGGTGGGAAGGATGAGCTGTGCATATCTACTCTATGCTATAACTAATCCCATTTTGAACTAGTAATTTACATTTGTCATTTTCTTGCTAGACCAATAACTCTCTGATTAGCTGTTATATATATATCTACATCCATACTATTTAGTGTTTTGTAGGTTTCCTAGGTATCCATTTGAAAAAACTGTCCTACTTTGGTATTTAATCACGGAGGGAAATACAATTTAAAGTTGGCTTCATTGTTTAAAATGGCATAAATATGGTTAAATCTTAACTGCTATCATATAGAATTCTAAGCAGATATCAACTAGCTGAGTTCGAGGTATGTGTATAAGACCACTTATTTAATTAACTTATTGATTATTATTCTATGGAAAGGTTTATCCCATTGTTCTTGAAATTTGCAGTTATGTGTTCTTGGCAACCTTTGCCCTGAAACTGTGGAGGAAGCTACTTCCATAGTTCCATCTTTGAAGGTATTTTTTTAGCCAACTTTGTATAATTATGCCTATATTAAATGGTAGTTTATTTTGTTGGTATTTTAATGTGCTGATCCTAAGTAGGTACTAACTTTTAAAAAGTTTATCGTTATGTCTTTTTTTATGCATCAAGTTTCTAAATTAGGCTAAAATGTCCATGTGTCAAGTTTTTAAAGTTTTTTAGAAACAAAACTTTAACGGTTTCCATCCAAAACTAATGATGAGTATTTTTTGAATTCTTGAGGTATTTTTGGAACTTTTGAAATTTCAAAGGCATGTTCGATACAAAGAGTAAAATTTAGGAACGTTTTCTATAATTTAGTCTTTAAATTGCTGCTAAAATTTTAAAGTGAAAACAAAATGTTTATAGATAGAGTAGATTTGCTTATAAATACTTTTATTGGTTTCAGACTAAAGGAAGAGTGCATGACGACGAAGCAATAGAGAAGATGTTGAATGATCTTTCATTAATCAAAAAGTTTGAGTAA ATGTGTTATAGTATCATTCATTTAAGGTTGACTTATGTTGGACCTTTGGCCCCCAAATTTTTATCACAAGCTCGGCCTCATGTATGGCCAAAGCCGATCAGGCCCATGCTCTTCCTTGATCCATTATTTCGTTTTCTCTCGTTATCCTATTCTACCCTTGTTGAAAACGAAGAAGCTGCCTCTGATTTTGCCGTCACGTTTCGCCGTCAGCCGGATCTCTGCGTTTTGTGGTTGGACAAATCTTTAACTCGAAGCATGTCTGGAGAAGAGGAAGAAAATGCCGCAGAGCTTAAAATTGGGGATGAGTTCTTAAAAGCTAAGTGTTTAATGAATTGTGAAGTTTCCTTGATCCTGGAACACAAGTATGAGCAGCTTCAACAAAGGGCTGAGGATCCAACAAATCAAGTTTCTCAAGTGTTTGAAAAGTCACTGCAGTATGTGAAACGTTTCAGTCGCTATAAGAACCCCGATGCTGTTAGACAAGTCCGAGAAATTCTAAGCAGATATCAACTAGCTGAGTTCGAGTTATGTGTTCTTGGCAACCTTTGCCCTGAAACTGTGGAGGAAGCTACTTCCATAGTTCCATCTTTGAAGACTAAAGGAAGAGTGCATGACGACGAAGCAATAGAGAAGATGTTGAATGATCTTTCATTAATCAAAAAGTTTGAGTAA ATGTGTTATAGTATCATTCATTTAAGGTTGACTTATGTTGGACCTTTGGCCCCCAAATTTTTATCACAAGCTCGGCCTCATGTATGGCCAAAGCCGATCAGGCCCATGCTCTTCCTTGATCCATTATTTCGTTTTCTCTCGTTATCCTATTCTACCCTTGTTGAAAACGAAGAAGCTGCCTCTGATTTTGCCGTCACGTTTCGCCGTCAGCCGGATCTCTGCGTTTTGTGGTTGGACAAATCTTTAACTCGAAGCATGTCTGGAGAAGAGGAAGAAAATGCCGCAGAGCTTAAAATTGGGGATGAGTTCTTAAAAGCTAAGTGTTTAATGAATTGTGAAGTTTCCTTGATCCTGGAACACAAGTATGAGCAGCTTCAACAAAGGGCTGAGGATCCAACAAATCAAGTTTCTCAAGTGTTTGAAAAGTCACTGCAGTATGTGAAACGTTTCAGTCGCTATAAGAACCCCGATGCTGTTAGACAAGTCCGAGAAATTCTAAGCAGATATCAACTAGCTGAGTTCGAGTTATGTGTTCTTGGCAACCTTTGCCCTGAAACTGTGGAGGAAGCTACTTCCATAGTTCCATCTTTGAAGACTAAAGGAAGAGTGCATGACGACGAAGCAATAGAGAAGATGTTGAATGATCTTTCATTAATCAAAAAGTTTGAGTAA MCYSIIHLRLTYVGPLAPKFLSQARPHVWPKPIRPMLFLDPLFRFLSLSYSTLVENEEAASDFAVTFRRQPDLCVLWLDKSLTRSMSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQRAEDPTNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEATSIVPSLKTKGRVHDDEAIEKMLNDLSLIKKFE Homology
BLAST of PI0007043 vs. ExPASy Swiss-Prot
Match: O48890 (DNA-directed RNA polymerase II subunit 4 OS=Arabidopsis thaliana OX=3702 GN=NRPB4 PE=1 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 2.3e-66 Identity = 126/138 (91.30%), Postives = 133/138 (96.38%), Query Frame = 0
BLAST of PI0007043 vs. ExPASy Swiss-Prot
Match: O15514 (DNA-directed RNA polymerase II subunit RPB4 OS=Homo sapiens OX=9606 GN=POLR2D PE=1 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.0e-21 Identity = 57/137 (41.61%), Postives = 94/137 (68.61%), Query Frame = 0
BLAST of PI0007043 vs. ExPASy Swiss-Prot
Match: Q9D7M8 (DNA-directed RNA polymerase II subunit RPB4 OS=Mus musculus OX=10090 GN=Polr2d PE=1 SV=2) HSP 1 Score: 105.1 bits (261), Expect = 1.0e-21 Identity = 57/137 (41.61%), Postives = 94/137 (68.61%), Query Frame = 0
BLAST of PI0007043 vs. ExPASy Swiss-Prot
Match: Q54S04 (DNA-directed RNA polymerase II subunit rpb4 OS=Dictyostelium discoideum OX=44689 GN=polr2d PE=3 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 2.8e-19 Identity = 55/147 (37.41%), Postives = 87/147 (59.18%), Query Frame = 0
BLAST of PI0007043 vs. ExPASy Swiss-Prot
Match: Q9VEA5 (DNA-directed RNA polymerase II subunit Rpb4 OS=Drosophila melanogaster OX=7227 GN=Rpb4 PE=2 SV=5) HSP 1 Score: 88.6 bits (218), Expect = 9.8e-17 Identity = 47/126 (37.30%), Postives = 80/126 (63.49%), Query Frame = 0
BLAST of PI0007043 vs. ExPASy TrEMBL
Match: A0A1S3CA78 (DNA-directed RNA polymerase II subunit 4-like OS=Cucumis melo OX=3656 GN=LOC103498588 PE=4 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 2.3e-69 Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0
BLAST of PI0007043 vs. ExPASy TrEMBL
Match: A0A5A7T811 (DNA-directed RNA polymerase II subunit 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G001820 PE=4 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 2.3e-69 Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0
BLAST of PI0007043 vs. ExPASy TrEMBL
Match: A0A6J1JVN3 (DNA-directed RNA polymerase II subunit 4-like OS=Cucurbita maxima OX=3661 GN=LOC111489290 PE=4 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 6.3e-67 Identity = 133/138 (96.38%), Postives = 135/138 (97.83%), Query Frame = 0
BLAST of PI0007043 vs. ExPASy TrEMBL
Match: A0A6J1FFS7 (DNA-directed RNA polymerase II subunit 4-like OS=Cucurbita moschata OX=3662 GN=LOC111445330 PE=4 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 6.3e-67 Identity = 133/138 (96.38%), Postives = 135/138 (97.83%), Query Frame = 0
BLAST of PI0007043 vs. ExPASy TrEMBL
Match: A0A5D3C019 (DNA-directed RNA polymerase II subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G002310 PE=4 SV=1) HSP 1 Score: 262.7 bits (670), Expect = 1.4e-66 Identity = 131/138 (94.93%), Postives = 136/138 (98.55%), Query Frame = 0
BLAST of PI0007043 vs. NCBI nr
Match: XP_008459458.1 (PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Cucumis melo] >XP_008459459.1 PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Cucumis melo] >KAA0039380.1 DNA-directed RNA polymerase II subunit 4-like [Cucumis melo var. makuwa]) HSP 1 Score: 271.9 bits (694), Expect = 4.8e-69 Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0
BLAST of PI0007043 vs. NCBI nr
Match: XP_004141497.1 (DNA-directed RNA polymerase II subunit 4 [Cucumis sativus] >XP_031742047.1 DNA-directed RNA polymerase II subunit 4 [Cucumis sativus] >KAE8648963.1 hypothetical protein Csa_008563 [Cucumis sativus]) HSP 1 Score: 270.8 bits (691), Expect = 1.1e-68 Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0
BLAST of PI0007043 vs. NCBI nr
Match: XP_038890773.1 (DNA-directed RNA polymerase II subunit 4-like [Benincasa hispida] >XP_038890774.1 DNA-directed RNA polymerase II subunit 4-like [Benincasa hispida]) HSP 1 Score: 269.6 bits (688), Expect = 2.4e-68 Identity = 136/138 (98.55%), Postives = 137/138 (99.28%), Query Frame = 0
BLAST of PI0007043 vs. NCBI nr
Match: XP_022939401.1 (DNA-directed RNA polymerase II subunit 4-like [Cucurbita moschata] >XP_022939402.1 DNA-directed RNA polymerase II subunit 4-like [Cucurbita moschata] >XP_022993195.1 DNA-directed RNA polymerase II subunit 4-like [Cucurbita maxima] >XP_022993196.1 DNA-directed RNA polymerase II subunit 4-like [Cucurbita maxima] >XP_023549816.1 DNA-directed RNA polymerase II subunit 4-like [Cucurbita pepo subsp. pepo] >XP_023549818.1 DNA-directed RNA polymerase II subunit 4-like [Cucurbita pepo subsp. pepo] >KAG6578503.1 DNA-directed RNA polymerase II subunit 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016067.1 DNA-directed RNA polymerase II subunit 4 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 263.8 bits (673), Expect = 1.3e-66 Identity = 133/138 (96.38%), Postives = 135/138 (97.83%), Query Frame = 0
BLAST of PI0007043 vs. NCBI nr
Match: XP_038884885.1 (DNA-directed RNA polymerase II subunit 4 [Benincasa hispida]) HSP 1 Score: 263.1 bits (671), Expect = 2.2e-66 Identity = 132/138 (95.65%), Postives = 136/138 (98.55%), Query Frame = 0
BLAST of PI0007043 vs. TAIR 10
Match: AT5G09920.1 (RNA polymerase II, Rpb4, core protein ) HSP 1 Score: 253.4 bits (646), Expect = 1.6e-67 Identity = 126/138 (91.30%), Postives = 133/138 (96.38%), Query Frame = 0
BLAST of PI0007043 vs. TAIR 10
Match: AT4G15950.1 (RNA polymerase II, Rpb4, core protein ) HSP 1 Score: 83.2 bits (204), Expect = 2.9e-16 Identity = 51/144 (35.42%), Postives = 85/144 (59.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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