PI0006818 (gene) Melon (PI 482460) v1

Overview


Name	PI0006818
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	serine-rich protein-related
Location	chr02: 16665048 .. 16665780 (-)
RNA-Seq Expression	PI0006818
Synteny	PI0006818

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTGCTTCATGCCTCACTTATAAAAACTCCAATTCCACATATTCTTTTCTTTTCAATCCCCACAAGGTAACTCATTAAATTATCAAATACCCAAAACATAAAACACACCTTACAATTTTACAAAGTCGCAGAGCAACAATAACCAAAAATAATGTGTTACCCACAACATTTCCTGCCTCGCAGGGACTTTTTGGCTTTGCAATGCAATTGGGTTCTCTTTCAGAGCACACCGGCGGAGGAGGCGACAGCGGCGATTGAGAGTTGCGGCGATGAGTCGGCGAAAAGGCGTTGCTTGTGCTCGCCGACGAGGCACCCAGGGTCGTTTCGTTGCAGGCTACACCGAAGTGAGTACGTTTGGGTTGCGCCGCGGAGGACGGTAAAAAATGGATCGGCGGAGGGTAAAATATTGACGAACGATAAGTAATTACTGTTTGTGGTCTCTGTAAAAATAATATGAATGAGTTTGTGTGTATTATATATATCCATAATTGGGATTGCATGCAATCGCAAATGAATGAATATTAATTGTGGCTTTTAATTTGGTTAAGGTTCTTGGAACTAATGTTTTATGATAGAAGTCCAATTTCTACTTGGATATTTTGAGAGGTTGAATTTTAGTTAAATAGGTGGAATGTCCATTTTCGAGTTTATGTTATTACTGTGCTATGTATGTGTGAACTTTTGTGTATTATAAAATTAAAAATAAAACCAACGAAGATCCGTTACCGTTCG

mRNA sequence

CTTTGCTTCATGCCTCACTTATAAAAACTCCAATTCCACATATTCTTTTCTTTTCAATCCCCACAAGGTAACTCATTAAATTATCAAATACCCAAAACATAAAACACACCTTACAATTTTACAAAGTCGCAGAGCAACAATAACCAAAAATAATGTGTTACCCACAACATTTCCTGCCTCGCAGGGACTTTTTGGCTTTGCAATGCAATTGGGTTCTCTTTCAGAGCACACCGGCGGAGGAGGCGACAGCGGCGATTGAGAGTTGCGGCGATGAGTCGGCGAAAAGGCGTTGCTTGTGCTCGCCGACGAGGCACCCAGGGTCGTTTCGTTGCAGGCTACACCGAAGTGAGTACGTTTGGGTTGCGCCGCGGAGGACGGTAAAAAATGGATCGGCGGAGGGTAAAATATTGACGAACGATAAGTAATTACTGTTTGTGGTCTCTGTAAAAATAATATGAATGAGTTTGTGTGTATTATATATATCCATAATTGGGATTGCATGCAATCGCAAATGAATGAATATTAATTGTGGCTTTTAATTTGGTTAAGGTTCTTGGAACTAATGTTTTATGATAGAAGTCCAATTTCTACTTGGATATTTTGAGAGGTTGAATTTTAGTTAAATAGGTGGAATGTCCATTTTCGAGTTTATGTTATTACTGTGCTATGTATGTGTGAACTTTTGTGTATTATAAAATTAAAAATAAAACCAACGAAGATCCGTTACCGTTCG

Coding sequence (CDS)

ATGTGTTACCCACAACATTTCCTGCCTCGCAGGGACTTTTTGGCTTTGCAATGCAATTGGGTTCTCTTTCAGAGCACACCGGCGGAGGAGGCGACAGCGGCGATTGAGAGTTGCGGCGATGAGTCGGCGAAAAGGCGTTGCTTGTGCTCGCCGACGAGGCACCCAGGGTCGTTTCGTTGCAGGCTACACCGAAGTGAGTACGTTTGGGTTGCGCCGCGGAGGACGGTAAAAAATGGATCGGCGGAGGGTAAAATATTGACGAACGATAAGTAA

Protein sequence

MCYPQHFLPRRDFLALQCNWVLFQSTPAEEATAAIESCGDESAKRRCLCSPTRHPGSFRCRLHRSEYVWVAPRRTVKNGSAEGKILTNDK

Homology

[Close]

BLAST of PI0006818 vs. ExPASy TrEMBL
Match: A0A0A0LZG6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G369510 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.2e-40
Identity = 79/90 (87.78%), Postives = 83/90 (92.22%), Query Frame = 0


Query: 1  MCYPQHFLPRRDFLALQCNWVLFQSTPAEEATAAIESCGDESAKRRCLCSPTRHPGSFRC 60
          MCYP HFL RRDF +LQCNWVLFQ+TPAE+AT AIESCGDES KRRCLCSPTRHPGSFRC
Sbjct: 1  MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCGDESGKRRCLCSPTRHPGSFRC 60

Query: 61 RLHRSEYVWVAPRRTVKNGSAEGKILTNDK 91
          RLHR+EYVWVA RRTVKNG AEGKILTNDK
Sbjct: 61 RLHRNEYVWVARRRTVKNGPAEGKILTNDK 90

[Close]

BLAST of PI0006818 vs. ExPASy TrEMBL
Match: A0A5A7TXE6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001380 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.1e-38
Identity = 77/90 (85.56%), Postives = 80/90 (88.89%), Query Frame = 0


Query: 1  MCYPQHFLPRRDFLALQCNWVLFQSTPAEEATAAIESCGDESAKRRCLCSPTRHPGSFRC 60
          MCYP HFLPR DFL+ QCNWVLFQ+ PAEE TAAIESCGDES KRRCLCSPT HPGSFRC
Sbjct: 1  MCYPHHFLPRTDFLSPQCNWVLFQTVPAEETTAAIESCGDESGKRRCLCSPTTHPGSFRC 60

Query: 61 RLHRSEYVWVAPRRTVKNGSAEGKILTNDK 91
          RLHRSEYVWVA RRTVKN SAE K+LTNDK
Sbjct: 61 RLHRSEYVWVARRRTVKNVSAEVKVLTNDK 90

[Close]

BLAST of PI0006818 vs. ExPASy TrEMBL
Match: A0A371GGR7 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_28465 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.6e-08
Identity = 33/72 (45.83%), Postives = 44/72 (61.11%), Query Frame = 0


Query: 1  MCYPQHFLPRRDFLALQCNWVLFQST---PAEEATAAIESCGDESAKRRCLCSPTRHPGS 60
          MC P     +R+   L   W++FQS+   P ++  +A  S    S K RC+CSP++HPGS
Sbjct: 1  MCQPGVSFLKREAFILHRTWLVFQSSGHAPTQDHDSAATSAETASVK-RCVCSPSQHPGS 60

Query: 61 FRCRLHRSEYVW 70
          FRCRLH  EYVW
Sbjct: 61 FRCRLHHGEYVW 71

[Close]

BLAST of PI0006818 vs. ExPASy TrEMBL
Match: A0A151S3D7 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_028968 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.5e-08
Identity = 36/80 (45.00%), Postives = 49/80 (61.25%), Query Frame = 0


Query: 1  MCYPQHFLPRRDFLALQCNWVLFQSTPAEEATAAIESCG--DESAK-RRCLCSPTRHPGS 60
          MC+P      R+ L +   W++FQ    E A   +   G  +ESA  +RC+CSP++HPGS
Sbjct: 1  MCHPGVSFVEREGLVVHTRWLVFQ--VPEHAPRQVHGGGTSEESASVKRCVCSPSQHPGS 60

Query: 61 FRCRLHRSEYVWVAPRRTVK 78
          FRCRLH +EYVW    RT+K
Sbjct: 61 FRCRLHHAEYVWRG--RTIK 76

[Close]

BLAST of PI0006818 vs. ExPASy TrEMBL
Match: A0A5N5J6W7 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_028182 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.0e-07
Identity = 34/75 (45.33%), Postives = 44/75 (58.67%), Query Frame = 0


Query: 1  MCYP------QHFLPRRDFLALQCNWVLFQSTPAEEATAAIESCGDESAKRRCLCSPTRH 60
          MC+P      ++ +  R +L LQ      +  PAE   AA    G   + ++CLCSPTRH
Sbjct: 1  MCHPGVPRASRNLVVYRRWLVLQAAETETEHAPAE--VAATGGSGGAGSTKKCLCSPTRH 60

Query: 61 PGSFRCRLHRSEYVW 70
          PGSFRCR HRS+YVW
Sbjct: 61 PGSFRCRHHRSDYVW 73

[Close]

BLAST of PI0006818 vs. NCBI nr
Match: KGN65356.1 (hypothetical protein Csa_020011 [Cucumis sativus])

HSP 1 Score: 175.3 bits (443), Expect = 2.5e-40
Identity = 79/90 (87.78%), Postives = 83/90 (92.22%), Query Frame = 0


Query: 1  MCYPQHFLPRRDFLALQCNWVLFQSTPAEEATAAIESCGDESAKRRCLCSPTRHPGSFRC 60
          MCYP HFL RRDF +LQCNWVLFQ+TPAE+AT AIESCGDES KRRCLCSPTRHPGSFRC
Sbjct: 1  MCYPHHFLSRRDFSSLQCNWVLFQTTPAEDATPAIESCGDESGKRRCLCSPTRHPGSFRC 60

Query: 61 RLHRSEYVWVAPRRTVKNGSAEGKILTNDK 91
          RLHR+EYVWVA RRTVKNG AEGKILTNDK
Sbjct: 61 RLHRNEYVWVARRRTVKNGPAEGKILTNDK 90

[Close]

BLAST of PI0006818 vs. NCBI nr
Match: KAA0046597.1 (hypothetical protein E6C27_scaffold114G001380 [Cucumis melo var. makuwa])

HSP 1 Score: 168.7 bits (426), Expect = 2.3e-38
Identity = 77/90 (85.56%), Postives = 80/90 (88.89%), Query Frame = 0


Query: 1  MCYPQHFLPRRDFLALQCNWVLFQSTPAEEATAAIESCGDESAKRRCLCSPTRHPGSFRC 60
          MCYP HFLPR DFL+ QCNWVLFQ+ PAEE TAAIESCGDES KRRCLCSPT HPGSFRC
Sbjct: 1  MCYPHHFLPRTDFLSPQCNWVLFQTVPAEETTAAIESCGDESGKRRCLCSPTTHPGSFRC 60

Query: 61 RLHRSEYVWVAPRRTVKNGSAEGKILTNDK 91
          RLHRSEYVWVA RRTVKN SAE K+LTNDK
Sbjct: 61 RLHRSEYVWVARRRTVKNVSAEVKVLTNDK 90

[Close]

BLAST of PI0006818 vs. NCBI nr
Match: KAG6589902.1 (hypothetical protein SDJN03_15325, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 117.1 bits (292), Expect = 7.9e-23
Identity = 58/92 (63.04%), Postives = 65/92 (70.65%), Query Frame = 0


Query: 1  MCYPQHFLPRRDFLALQCNWVLFQSTPAEEATAAIESCGDESAKRRCLCSPTRHPGSFRC 60
          MCYP    PRR+FL +QCNWVL Q+     A  A+ES G ES K+RCLCSPTRHPGSFRC
Sbjct: 1  MCYPHDVPPRREFLNVQCNWVLLQT-----AATAVESGGGESVKKRCLCSPTRHPGSFRC 60

Query: 61 RLHRSEYVWVAPRRTVKNGSAEGK--ILTNDK 91
          RLHRSEYVWV   R VK+G A  K   L ND+
Sbjct: 61 RLHRSEYVWVGRPRMVKSGPAASKKVALFNDE 87

[Close]

BLAST of PI0006818 vs. NCBI nr
Match: RDX89769.1 (hypothetical protein CR513_28465, partial [Mucuna pruriens])

HSP 1 Score: 68.6 bits (166), Expect = 3.2e-08
Identity = 33/72 (45.83%), Postives = 44/72 (61.11%), Query Frame = 0


Query: 1  MCYPQHFLPRRDFLALQCNWVLFQST---PAEEATAAIESCGDESAKRRCLCSPTRHPGS 60
          MC P     +R+   L   W++FQS+   P ++  +A  S    S K RC+CSP++HPGS
Sbjct: 1  MCQPGVSFLKREAFILHRTWLVFQSSGHAPTQDHDSAATSAETASVK-RCVCSPSQHPGS 60

Query: 61 FRCRLHRSEYVW 70
          FRCRLH  EYVW
Sbjct: 61 FRCRLHHGEYVW 71

[Close]

BLAST of PI0006818 vs. NCBI nr
Match: KYP49330.1 (hypothetical protein KK1_028968 [Cajanus cajan])

HSP 1 Score: 67.4 bits (163), Expect = 7.2e-08
Identity = 36/80 (45.00%), Postives = 49/80 (61.25%), Query Frame = 0


Query: 1  MCYPQHFLPRRDFLALQCNWVLFQSTPAEEATAAIESCG--DESAK-RRCLCSPTRHPGS 60
          MC+P      R+ L +   W++FQ    E A   +   G  +ESA  +RC+CSP++HPGS
Sbjct: 1  MCHPGVSFVEREGLVVHTRWLVFQ--VPEHAPRQVHGGGTSEESASVKRCVCSPSQHPGS 60

Query: 61 FRCRLHRSEYVWVAPRRTVK 78
          FRCRLH +EYVW    RT+K
Sbjct: 61 FRCRLHHAEYVWRG--RTIK 76

[Close]

BLAST of PI0006818 vs. TAIR 10
Match: AT1G52342.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 52.4 bits (124), Expect = 2.2e-07
Identity = 23/53 (43.40%), Postives = 34/53 (64.15%), Query Frame = 0


Query: 30 EATAAIESCGD-ESAKRRCLCSPTRHPGSFRCRLHRSEYVWVAPRRTVKNGSA 82
          EATA   S GD    K++C+CSP++HP SF+CR H+ EY W+    +  + S+
Sbjct: 32 EATAGHRSGGDGGGGKKKCVCSPSKHPRSFKCRYHQHEYQWLPSSSSSSSSSS 84

[Close]

BLAST of PI0006818 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 1.6e-05
Identity = 18/22 (81.82%), Postives = 19/22 (86.36%), Query Frame = 0


Query: 44 KRRCLCSPTRHPGSFRCRLHRS 66
          K  CLCSPT HPGSFRCR+HRS
Sbjct: 41 KTNCLCSPTTHPGSFRCRIHRS 62

[Close]

BLAST of PI0006818 vs. TAIR 10
Match: AT1G67910.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1). )

HSP 1 Score: 46.2 bits (108), Expect = 1.6e-05
Identity = 18/22 (81.82%), Postives = 19/22 (86.36%), Query Frame = 0


Query: 44 KRRCLCSPTRHPGSFRCRLHRS 66
          K  CLCSPT HPGSFRCR+HRS
Sbjct: 41 KTNCLCSPTTHPGSFRCRIHRS 62

[Close]

BLAST of PI0006818 vs. TAIR 10
Match: AT5G25280.1 (serine-rich protein-related )

HSP 1 Score: 45.1 bits (105), Expect = 3.6e-05
Identity = 16/23 (69.57%), Postives = 21/23 (91.30%), Query Frame = 0


Query: 43  AKRRCLCSPTRHPGSFRCRLHRS 66
           ++RRC+CSPT HPGSFRC LH++
Sbjct: 122 SRRRCMCSPTTHPGSFRCSLHKN 144

[Close]

BLAST of PI0006818 vs. TAIR 10
Match: AT5G20370.1 (serine-rich protein-related )

HSP 1 Score: 45.1 bits (105), Expect = 3.6e-05
Identity = 19/42 (45.24%), Postives = 24/42 (57.14%), Query Frame = 0


Query: 23 FQSTPAEEATAAIESCGDESAKRRCLCSPTRHPGSFRCRLHR 65
          F S  +    + +    +   KR+CLCSPT HPGSFRC  HR
Sbjct: 47 FYSPGSIPKPSVVTVSSNHQTKRKCLCSPTTHPGSFRCSFHR 88

The following BLAST results are available for this feature:

BLAST of PI0006818 vs.


Match Name	E-value	Identity	Description

BLAST of PI0006818 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LZG6	1.2e-40	87.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G369510 PE=4 SV=1	[more]
A0A5A7TXE6	1.1e-38	85.56	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A371GGR7	1.6e-08	45.83	Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_28465 P...	[more]
A0A151S3D7	3.5e-08	45.00	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_028968 PE=4 SV=1	[more]
A0A5N5J6W7	1.0e-07	45.33	Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_028182 PE=4 SV=1	[more]

BLAST of PI0006818 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65356.1	2.5e-40	87.78	hypothetical protein Csa_020011 [Cucumis sativus]	[more]
KAA0046597.1	2.3e-38	85.56	hypothetical protein E6C27_scaffold114G001380 [Cucumis melo var. makuwa]	[more]
KAG6589902.1	7.9e-23	63.04	hypothetical protein SDJN03_15325, partial [Cucurbita argyrosperma subsp. sorori...	[more]
RDX89769.1	3.2e-08	45.83	hypothetical protein CR513_28465, partial [Mucuna pruriens]	[more]
KYP49330.1	7.2e-08	45.00	hypothetical protein KK1_028968 [Cajanus cajan]	[more]

BLAST of PI0006818 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52342.1	2.2e-07	43.40	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G67910.1	1.6e-05	81.82	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G67910.2	1.6e-05	81.82	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G25280.1	3.6e-05	69.57	serine-rich protein-related	[more]
AT5G20370.1	3.6e-05	45.24	serine-rich protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33132:SF72	OS01G0778900 PROTEIN	coord: 25..73
None	No IPR available	PANTHER	PTHR33132	OSJNBB0118P14.9 PROTEIN	coord: 25..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0006818.1	PI0006818.1	mRNA