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PI0006795 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCAACTTTCACAATTCCAAATCCGATTACGACCACCGCCGTCACCGCAACCACCACCACCATTACTGCAAACGCCATCCAAATCACCACCAATCTCCCGGTGTTTGTTCCTTGTGTTTAACCGAAAAGCTCTCCCGAATTCTCTCCCCCGCCGCTGTCGCTGCTTCATCGCGTAATAAATTCTCCAATTCTCTTTCTTCTTCTTGTTCCTCTTCTTATTACTCCTCCTGTTCCTCTTCTTCTTCCTCTTGTTCTTCGCCGAAGCTTTACAATTACAATTCGGATAATCATCGTCGTAAGATGGCTTTTGTGTTTTCTGCGTCTTCGATCTTTAAGAAGAGTAAATCGATGGCGAGATTGAAACGAGGAACGGAGAGTGATTGTGGAAAGAAGAGTAATGATGACTTAGGGTTTTGGTCGAGGTTTCTGAATCGGCCGAGACTGAAGAGGATGGAATTTCAAGAGGTTTTGATGCGTTCGAGAACTGTTGTACAGAGGAACGTGCATGGATGAATAGAATCGTCTTGAAGATTCGCGAAGATTTTGTGATTTCT ATGGCCAACTTTCACAATTCCAAATCCGATTACGACCACCGCCGTCACCGCAACCACCACCACCATTACTGCAAACGCCATCCAAATCACCACCAATCTCCCGGTGTTTGTTCCTTGTGTTTAACCGAAAAGCTCTCCCGAATTCTCTCCCCCGCCGCTGTCGCTGCTTCATCGCGTAATAAATTCTCCAATTCTCTTTCTTCTTCTTGTTCCTCTTCTTATTACTCCTCCTGTTCCTCTTCTTCTTCCTCTTGTTCTTCGCCGAAGCTTTACAATTACAATTCGGATAATCATCGTCGTAAGATGGCTTTTGTGTTTTCTGCGTCTTCGATCTTTAAGAAGAGTAAATCGATGGCGAGATTGAAACGAGGAACGGAGAGTGATTGTGGAAAGAAGAGTAATGATGACTTAGGGTTTTGGTCGAGGTTTCTGAATCGGCCGAGACTGAAGAGGATGGAATTTCAAGAGGTTTTGATGCGTTCGAGAACTGTTGTACAGAGGAACGTGCATGGATGAATAGAATCGTCTTGAAGATTCGCGAAGATTTTGTGATTTCT ATGGCCAACTTTCACAATTCCAAATCCGATTACGACCACCGCCGTCACCGCAACCACCACCACCATTACTGCAAACGCCATCCAAATCACCACCAATCTCCCGGTGTTTGTTCCTTGTGTTTAACCGAAAAGCTCTCCCGAATTCTCTCCCCCGCCGCTGTCGCTGCTTCATCGCGTAATAAATTCTCCAATTCTCTTTCTTCTTCTTGTTCCTCTTCTTATTACTCCTCCTGTTCCTCTTCTTCTTCCTCTTGTTCTTCGCCGAAGCTTTACAATTACAATTCGGATAATCATCGTCGTAAGATGGCTTTTGTGTTTTCTGCGTCTTCGATCTTTAAGAAGAGTAAATCGATGGCGAGATTGAAACGAGGAACGGAGAGTGATTGTGGAAAGAAGAGTAATGATGACTTAGGGTTTTGGTCGAGGTTTCTGAATCGGCCGAGACTGAAGAGGATGGAATTTCAAGAGGTTTTGATGCGTTCGAGAACTGTTGTACAGAGGAACGTGCATGGATGA MANFHNSKSDYDHRRHRNHHHHYCKRHPNHHQSPGVCSLCLTEKLSRILSPAAVAASSRNKFSNSLSSSCSSSYYSSCSSSSSSCSSPKLYNYNSDNHRRKMAFVFSASSIFKKSKSMARLKRGTESDCGKKSNDDLGFWSRFLNRPRLKRMEFQEVLMRSRTVVQRNVHG Homology
BLAST of PI0006795 vs. ExPASy TrEMBL
Match: A0A0A0LJL6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G889870 PE=4 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 1.6e-62 Identity = 152/180 (84.44%), Postives = 159/180 (88.33%), Query Frame = 0
BLAST of PI0006795 vs. ExPASy TrEMBL
Match: A0A1S3CQP1 (SKI/DACH domain-containing protein 1 OS=Cucumis melo OX=3656 GN=LOC103503688 PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 6.1e-62 Identity = 154/183 (84.15%), Postives = 157/183 (85.79%), Query Frame = 0
BLAST of PI0006795 vs. ExPASy TrEMBL
Match: A0A6J1IHL9 (uncharacterized protein LOC111476165 OS=Cucurbita maxima OX=3661 GN=LOC111476165 PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 9.8e-44 Identity = 123/175 (70.29%), Postives = 133/175 (76.00%), Query Frame = 0
BLAST of PI0006795 vs. ExPASy TrEMBL
Match: A0A6J1FD38 (uncharacterized protein LOC111443018 OS=Cucurbita moschata OX=3662 GN=LOC111443018 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 3.2e-42 Identity = 118/175 (67.43%), Postives = 132/175 (75.43%), Query Frame = 0
BLAST of PI0006795 vs. ExPASy TrEMBL
Match: A0A6J1FKF2 (uncharacterized protein LOC111446076 OS=Cucurbita moschata OX=3662 GN=LOC111446076 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 2.8e-30 Identity = 110/178 (61.80%), Postives = 121/178 (67.98%), Query Frame = 0
BLAST of PI0006795 vs. NCBI nr
Match: XP_011652564.1 (uncharacterized protein LOC105435032 [Cucumis sativus]) HSP 1 Score: 248.8 bits (634), Expect = 3.3e-62 Identity = 152/180 (84.44%), Postives = 159/180 (88.33%), Query Frame = 0
BLAST of PI0006795 vs. NCBI nr
Match: KAE8651391.1 (hypothetical protein Csa_002099 [Cucumis sativus]) HSP 1 Score: 248.8 bits (634), Expect = 3.3e-62 Identity = 152/180 (84.44%), Postives = 159/180 (88.33%), Query Frame = 0
BLAST of PI0006795 vs. NCBI nr
Match: XP_008466205.1 (PREDICTED: SKI/DACH domain-containing protein 1 [Cucumis melo]) HSP 1 Score: 246.9 bits (629), Expect = 1.3e-61 Identity = 154/183 (84.15%), Postives = 157/183 (85.79%), Query Frame = 0
BLAST of PI0006795 vs. NCBI nr
Match: XP_038899400.1 (uncharacterized protein LOC120086706 [Benincasa hispida]) HSP 1 Score: 211.8 bits (538), Expect = 4.5e-51 Identity = 133/175 (76.00%), Postives = 143/175 (81.71%), Query Frame = 0
BLAST of PI0006795 vs. NCBI nr
Match: XP_022975755.1 (uncharacterized protein LOC111476165 [Cucurbita maxima]) HSP 1 Score: 186.4 bits (472), Expect = 2.0e-43 Identity = 123/175 (70.29%), Postives = 133/175 (76.00%), Query Frame = 0
BLAST of PI0006795 vs. TAIR 10
Match: AT1G72240.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22470.1); Has 65 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.4 bits (119), Expect = 1.6e-06 Identity = 41/91 (45.05%), Postives = 50/91 (54.95%), Query Frame = 0
BLAST of PI0006795 vs. TAIR 10
Match: AT1G35210.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22470.1); Has 83 Blast hits to 83 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 50.1 bits (118), Expect = 2.1e-06 Identity = 44/115 (38.26%), Postives = 64/115 (55.65%), Query Frame = 0
BLAST of PI0006795 vs. TAIR 10
Match: AT1G22470.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72240.1); Has 1693 Blast hits to 236 proteins in 54 species: Archae - 0; Bacteria - 8; Metazoa - 451; Fungi - 116; Plants - 94; Viruses - 2; Other Eukaryotes - 1022 (source: NCBI BLink). ) HSP 1 Score: 45.1 bits (105), Expect = 6.8e-05 Identity = 35/82 (42.68%), Postives = 48/82 (58.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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