PI0006774 (gene) Melon (PI 482460) v1

Overview


Name	PI0006774
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	RNA helicase
Location	chr02: 90842 .. 97097 (+)
RNA-Seq Expression	PI0006774
Synteny	PI0006774

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAACCCTCCCATATAATCGAAATATCTATACAATCACGGCTTCGCTATATATATATAGATGAGAGAAGAGTTGGAGGTAATGTGGTTGAGGCGAACGCAAAACCATATAGTCCATACGTTCTATCCTTATCGCTGGGTGTGCGATATTTGATAAACCCATCCTTTACGCTTCTCCAGTTCATACTTCATTCGGAGTTTGAGCGAGTGCAAACTCGCAAGTTACTTGGTAAGCCACTGAAGAGAAGCTGAAAACAATAAATGGCTTCCCTTCTTGGAGTTACTGCAATTCATCATGCACCAAATCTTGATGTGTACAGAAGGATGGGAACAACGGCGACGGCATCACCGACGCCTTCTCTTTCTTTTGTTGACAAGTCCCACTTACTTGCCCTCAAAGTTCAAACTTGTTTCGGTGGTAGTAGCCGTCGCAACTTGTCCGGATTCACCTCTTCTGCAATTGCGACTCCCAATTCCATACTCAGCGAAGAGGCTTTTAGAAGTCTCGATGGCTTCTCTAAAAACTCCTTGGACGATAATCTCATCGACTCTGAACCCAATTCATCTCTTGCATTCTCTTCTGACGATGATGAGCTCGCCATTTCCAAATTAAACTTGCCCCAGCGGCTGACGGATTCTCTTCAGAAGCGTGGGATTACCAACCTCTTCCCTATTCAAGTACTATCCCACTGTCTGACTTCGCTTTATGTCCCATTTCTCATTCCTGTATCATTTTACAGTTAATGTGGTTATTAGATTTTTTATTTTTCCAATTACTTGCTAAATGCTATCCGCGAAAGGGGGACACACTTTCTTTCTTTAATCAGACGCACTGCTTTAAGTTTGTAGTTATGATTTTCTCCGTTCTCTTTCAGTATTTTTGTTCGGTTTTTTGAGGCTATTACTTTAAATTCAGTTATCATCTGTTCGCTTAAATTTAAATTTCAAAATGTTATAGATTTGGGAAATGCTAACATGCAAAATCCATTGTGCACAAATTTTGAGAATGATGCCTACCCTTGCTTGTTTAAGAACTTTCATTTAGGATATAGACTCATTTTATTCTTAAGTTAATCTTCCAGGTTATGTTAATCACACAAGGAGAAGTAATTTGTTTTGAACCTTAATATACGTTTCGTTACAAGATATTTGTTGTCGAACAATTTGATTACTCAAGTGGTATGATTTTATCTCTAATTTTTTTATTTATTTGTTCATTTGAAACATGCAGAGAGCTGTTCTTGTCCCTGCATTAGAAGGTCGAGACCTCATTGCCCGTGCAAAGACTGGTACCGGGAAGACATTAGCTTTTGGGATACCAATTCTTAAAAAACTCACTGAAGATGATGAATCAAGAAGTTCGCGGAGGTATAATTTTGTGACTGCCTAAAACCTGGTACTTTGTGCATGTTTGGATTGACTTTTTAAATGTTTAAAGAGTGTTTTTATAAGTGCAAAAAAAGTGTAACACTTAGAAAGTCAATCCTAACGCACTTTTAGAGGTTTGTCTCAGAATTACTAACTTTTCAGTATTTGTTACAGGCGGTCTCGTCTTCCTAGAGTTTTGGTGTTAACTCCCACCAGGGAACTAGCCAAACAAGTGGAAAAAGAGATTAAGGAATCTGCACCTTATCTGAACACTGTTTGCGTTTATGGAGGAGTTTCATATGTTACACAGCAAAATGCTCTTTCTCGTGGAGTTGATGTGGTAGTTGGAACACCTGGTCGAATAATAGACCTAATAAATGGTAACAGCCTCAATTTGGGGGAAGTTGAATATTTAGTATTAGATGAAGCAGATCAGATGCTTGCTGTTGGGTTTGAGGAGGATGTGGAAGTAATTTTAGAAAAGCTTCCATCTCAGCGACAAAACATGCTTTTCTCTGCTACTATGCCAACGTGGGTTAAGAAACTTGCACGCAAATATTTGGAAAATCCATTGACCATAGATTTGGTAATCTTTTACATTTTTTTGACATCTTAATTAATTACTTAGTCTTCTGATTTTTGACATTTGCATATTTTTTATTGTAATAAACAATAAAATTGTGTTGGAAAGATGCTTCTTCTTTGGATTAAGAGATGAGCTAGGTTCTTTTTGTATGTTCTCTTTTCGTTTCTTTTTTTCACTTTTCAGTTATGTTTGGGCATGCAATTTTAGTAAAGGAAGTAATATGCATCTTCTATGTGACATTGTTGTCAATTGTCATGACAAGCTAGTGTATGCAAAAAGAAAAAATTCCAATAGTATTCTGATTCCCTAATACAAGTTTTAAGGAATCAAACCCACTTTGTCGTTAGAAATTGCATTTAATTCTCCATATAAAAATCAATTCCTGTTCAGTAAAAATAATCATCCTGTATCCATTGTGTAGGTTGGCGACCAGGATGAAAAGCTCGCTGAGGGGATCAAACTTCATGCCATATTAACGACTGCAACTTCAAAACAAACTATTCTCAGAGATCTTGTAACAGTAAGAATTGAAGCATATCCCCATTTCTTTGAGCATTACAGACGAGTAATCTTGGGACTATTCTTCTGTATGCTGTAACTGTGAAGCTGTTATTTGATGTCCTTTTATGCGGTTGGTTTGAACATATTAGATTATCACTAATTATTAAAGTTCAAACTTTTGGAAAACATCAAGTTCTTTTATTGAAAAGCTAGCTGTCACTGAGAAACAAAGAAAAAACTAATTTCTTTTATCTATAAATTCTTCATATTCACCTCGAACATGAATTTTAGCTTAAAATCAATTAATTCCCTTCTCATGGTTCATTTTAATAAAGAACATTTATGCTTGATCAAGTGTGTGTGTCTATTCCTTTAATATTTAACAATTGCATCTCACTTCATTCTTATGATACTTTGTTTTTTGCTTTGTCCTTTCCTTCAGACTACCTTACAAATTTCTTTGACTAATTGTCTTAAAATTTGATTTCATAAATTGGGCATTACTCAAGAGCATTACACGATATAAAATTGAGCCCTTGAGAAATATCTTCTATGAGACTCTTTCATTCATAATAGCATCCTTTCATTTTCATGTGAAACATATTTATTTTAATGCCTGATCTCCACAAAAAACGAGTCTAATAACATCGTGATTTCAGGTTTATGCGAAGGGGGGAAAGACCATTGTTTTTACTCAGACAAAACGTGATGCTGATGAAGTCTCTTTGGCATTAGCTAATAGCATAACATCAGAAGCATTGCATGGCGATATATCACAGCATCAACGGGAAAGAACATTAAATGGCTTTCGGCAAGGGAAGTTCACTGTGCTGGTTGCAACTGATGTAGCTTCACGAGGACTGGATATCCCAAATGTTGATTTGGTACTTTCATTTGGACTGTATTCTGATCAATGCCAATTTCTTTTGCTCTTGTTCAATACACCAAACACACCCCCCCCAAACCAACAAAAAAAAGAAAAAAGAAAAAAGAGAGATCGCTAATTCTTAAATGAAAATGGAAAAGAAATTCTTTGTGTTGGTTCGCTTTTTTTGAAATTATCCAAGGTTTCATTTAACCAAAAGTAGGGATAATTTTCAGTTTCTGCTCTTTCTTCAATGAACGGCCTTTGTACTTCCATTTCCTGAATTAAAGCTGATTTCTCATTAAAAAAATAGTTACAAGAAACAAAACAAAACAATAATAAAAATTAGGCGTTTGGAGGGATACCAGCAGTAATGTTTCCAGGTGACCATGTCTGTTGGATGGGCTTTTTTTTTTAATGATGTTTATGAACTTTTAGTTTCAATGTTTTTCTACCCTGTCCAAATTTTCAATCTGAGGTGTGCTCTAGTGATTTTGACAATTTGAGAGTAGTCAAGCATTTTTCAAATGATAGAGTCGGGCATTGTTGGCTTGTGATGTATCTTACTTTTAAAAGTTTCATTCTCATACATTTTAAGAGCATGTAAAGTTAGACCTCTTTCAAATTTTCATTTTCTATAACAATTATCTAACTGGACTTCTATCTACCTTCACTTCAGGTTATCCATTATGAACTTCCTAATGATCCTGAGACTTTTGTACATCGCTCTGGCCGCACTGGGCGCGCAGGAAAAGAGGGTACTGCCATTTTAATGTTTACAAATAGTCAAAGGAGAACAGTTAGATCACTTGAGCGTGATGTGGGATGCAAATTTGAGTTTGCAAATCCACCTGCAATTGAGGAGGTTCTAGAATCATCAGCTGAGCAAGTGGTTGTTACTCTTCGGGGTGTTCATCCTGAATCTATTGAGTATTTCACTCCAACTGCACAGAAGTTAATTGATGAACAAGGACCAGGTGCTCTGGCGGCTGCACTTGCACAATTAAGTGGGTTCTCCCATCCTCCTTCATCACGGTCACTTATTAACCACGAACAGGTATTAAGAGTTCTGTTTGTGAATTCATTATAGCTAGAATAATTATCTCTTGCAAATGGTTATGTCATTAAGGTAAAACATATTTGTTGCAGGGATGGGTGACATTGCAGCTGACCAGGGATCCATCTTATTCACGTGGGTTTTTGTCTGCTAGGTCTGTCACTGGATTTCTGTCTGACATCTATTCTCCAGCTGCAGACGAAATTGGAAAAATACATCTAATTGCAGATGAAAGGGTAAAAATCTTTAGCATGCTGTACCTATTTCATGTCTTTAATTTTAAATTTCCACTCGCGTACAATTTTGTTTTATAAACTTTAATATTGATGTTGGTAATGGCAGATAAATGGAGCAGTATTTGATCTTCCAGAGGAAATAGCAAAGGAGTTGCTGAATAAGGAACTGCCAGAAGGAAATACTCTTTTGAAGGTAACGAAGGTAAGTTTGTTCTTTCCTCCTCTCACGACCACAATTATGGCTTAGTTAATAATATTCTTATGTTGCCTCAAAAATAGTTTTATCTCTTTGATGCATGACCATTTACTAACAGAATGTTGGAACACATTCCATACTCCATTTTTTGCAGTTACCTCCTCTGCAGGACGATGGCCCACCAAGTGACAACTATGGAAGATTTTCTGGCAGAGAAAGAAATAGTCGAAATAGCTCTAGGGATCGCAGAGGTTTTAGAACATCAAGGGGCTGGGGAAGCAGTCGAGACTCTGATGATGATGGTGATATATTTAGTAGAAATCGCAGTTTTAGAACTAACAGCAGCAAGGGTCGGAATTTTAGAAGCTCGGGAGATGATTGGCTAATTGGAGGCAGACGATCAAGCAGGTCATCATCCGTGGATAGGTAATTTTATTTGCTTATTATGATAGTGGGTATTGTGCATTTCCTTATAACAGTGTTTTGGAAGTAAAATGATGTGTTTATAGCAAGAAAGTGAAAGGCATGCATTAATCTTTAAAAGTGTAGCAAGACTGTTTTGGGATGGTGAGTTAAGTATGCAGTTGATTTCGTTTGCATTTCCTTTTTTAATTATTGAGGGTATTTAGGTTCTGGTTTCTTATTCTCTTCTCTCTTTTTCCTGGGGGAGGGGAGGGAAGGGGTGGGGTAGGTGTTCCGGGAAAGAACTTTTAAGTATTAAAATTTGGAAAATTATTCATATTCTTATTGTGAGAATATTTCTCCGAAGGTGATTTGAAATTCATTGGTGTTCATTAATGATAAGCGTCAATGCTATCTGAAGAAATTAGGAATTTTGTTTTCTACTTTTGAACTTGGAAGTGTTCTTGCGATTTTGCCCTTCCACTTTTTCTTACATTCCCACTTAAACTGATTCATCTAGGAGACTACAGCCTGTTTCGTACACTCATCTGAGAAGTTACTCTGTTTTGTTTTGTTTTTTTTTTATCTTGAATTTGTTTTCACTAATTCTTCTGTGATGTAATCTGAATATATTTTGCAGATTTGGCGGGTCCTGTTTTAATTGCGGAAGGATGGGACACAGGGCATCAGAATGCCCTGACAAGTGATAAGCAAGACGACTAAGTATACTTGATCAGCTTCTAGTTATTGTGGGGACTCACAGGTAGGTTTTTGGGTTCAGCTAAGTTGCATCATCTTACATTCAGGTGGCTGGTATTCAGGTCTCGAAGATGCTGCTTGAAAGAGTTAACAGTCTCATGTTGCGTTACAAGATTACTTTTTACAATCTCAGTCTGTTGTAATTTAAGTTTTGCGCAGTGAAGCATTCAAATTGATTTGTCATGTTATGAGTTAGTTATATGGACACCCTTTTTCGAACCCCCATGTAGAATGTAAATGTTTCGGAAGAATGAAGAAATGAAAAACAGCATAGCATTCCGTTGGT

mRNA sequence

AAAAAACCCTCCCATATAATCGAAATATCTATACAATCACGGCTTCGCTATATATATATAGATGAGAGAAGAGTTGGAGGTAATGTGGTTGAGGCGAACGCAAAACCATATAGTCCATACGTTCTATCCTTATCGCTGGGTGTGCGATATTTGATAAACCCATCCTTTACGCTTCTCCAGTTCATACTTCATTCGGAGTTTGAGCGAGTGCAAACTCGCAAGTTACTTGGTAAGCCACTGAAGAGAAGCTGAAAACAATAAATGGCTTCCCTTCTTGGAGTTACTGCAATTCATCATGCACCAAATCTTGATGTGTACAGAAGGATGGGAACAACGGCGACGGCATCACCGACGCCTTCTCTTTCTTTTGTTGACAAGTCCCACTTACTTGCCCTCAAAGTTCAAACTTGTTTCGGTGGTAGTAGCCGTCGCAACTTGTCCGGATTCACCTCTTCTGCAATTGCGACTCCCAATTCCATACTCAGCGAAGAGGCTTTTAGAAGTCTCGATGGCTTCTCTAAAAACTCCTTGGACGATAATCTCATCGACTCTGAACCCAATTCATCTCTTGCATTCTCTTCTGACGATGATGAGCTCGCCATTTCCAAATTAAACTTGCCCCAGCGGCTGACGGATTCTCTTCAGAAGCGTGGGATTACCAACCTCTTCCCTATTCAAAGAGCTGTTCTTGTCCCTGCATTAGAAGGTCGAGACCTCATTGCCCGTGCAAAGACTGGTACCGGGAAGACATTAGCTTTTGGGATACCAATTCTTAAAAAACTCACTGAAGATGATGAATCAAGAAGTTCGCGGAGGCGGTCTCGTCTTCCTAGAGTTTTGGTGTTAACTCCCACCAGGGAACTAGCCAAACAAGTGGAAAAAGAGATTAAGGAATCTGCACCTTATCTGAACACTGTTTGCGTTTATGGAGGAGTTTCATATGTTACACAGCAAAATGCTCTTTCTCGTGGAGTTGATGTGGTAGTTGGAACACCTGGTCGAATAATAGACCTAATAAATGGTAACAGCCTCAATTTGGGGGAAGTTGAATATTTAGTATTAGATGAAGCAGATCAGATGCTTGCTGTTGGGTTTGAGGAGGATGTGGAAGTAATTTTAGAAAAGCTTCCATCTCAGCGACAAAACATGCTTTTCTCTGCTACTATGCCAACGTGGGTTAAGAAACTTGCACGCAAATATTTGGAAAATCCATTGACCATAGATTTGGTTGGCGACCAGGATGAAAAGCTCGCTGAGGGGATCAAACTTCATGCCATATTAACGACTGCAACTTCAAAACAAACTATTCTCAGAGATCTTGTAACAGTTTATGCGAAGGGGGGAAAGACCATTGTTTTTACTCAGACAAAACGTGATGCTGATGAAGTCTCTTTGGCATTAGCTAATAGCATAACATCAGAAGCATTGCATGGCGATATATCACAGCATCAACGGGAAAGAACATTAAATGGCTTTCGGCAAGGGAAGTTCACTGTGCTGGTTGCAACTGATGTAGCTTCACGAGGACTGGATATCCCAAATGTTGATTTGGTTATCCATTATGAACTTCCTAATGATCCTGAGACTTTTGTACATCGCTCTGGCCGCACTGGGCGCGCAGGAAAAGAGGGTACTGCCATTTTAATGTTTACAAATAGTCAAAGGAGAACAGTTAGATCACTTGAGCGTGATGTGGGATGCAAATTTGAGTTTGCAAATCCACCTGCAATTGAGGAGGTTCTAGAATCATCAGCTGAGCAAGTGGTTGTTACTCTTCGGGGTGTTCATCCTGAATCTATTGAGTATTTCACTCCAACTGCACAGAAGTTAATTGATGAACAAGGACCAGGTGCTCTGGCGGCTGCACTTGCACAATTAAGTGGGTTCTCCCATCCTCCTTCATCACGGTCACTTATTAACCACGAACAGGGATGGGTGACATTGCAGCTGACCAGGGATCCATCTTATTCACGTGGGTTTTTGTCTGCTAGGTCTGTCACTGGATTTCTGTCTGACATCTATTCTCCAGCTGCAGACGAAATTGGAAAAATACATCTAATTGCAGATGAAAGGATAAATGGAGCAGTATTTGATCTTCCAGAGGAAATAGCAAAGGAGTTGCTGAATAAGGAACTGCCAGAAGGAAATACTCTTTTGAAGGTAACGAAGTTACCTCCTCTGCAGGACGATGGCCCACCAAGTGACAACTATGGAAGATTTTCTGGCAGAGAAAGAAATAGTCGAAATAGCTCTAGGGATCGCAGAGGTTTTAGAACATCAAGGGGCTGGGGAAGCAGTCGAGACTCTGATGATGATGGTGATATATTTAGTAGAAATCGCAGTTTTAGAACTAACAGCAGCAAGGGTCGGAATTTTAGAAGCTCGGGAGATGATTGGCTAATTGGAGGCAGACGATCAAGCAGGTCATCATCCGTGGATAGATTTGGCGGGTCCTGTTTTAATTGCGGAAGGATGGGACACAGGGCATCAGAATGCCCTGACAAGTGATAAGCAAGACGACTAAGTATACTTGATCAGCTTCTAGTTATTGTGGGGACTCACAGGTAGGTTTTTGGGTTCAGCTAAGTTGCATCATCTTACATTCAGGTGGCTGGTATTCAGGTCTCGAAGATGCTGCTTGAAAGAGTTAACAGTCTCATGTTGCGTTACAAGATTACTTTTTACAATCTCAGTCTGTTGTAATTTAAGTTTTGCGCAGTGAAGCATTCAAATTGATTTGTCATGTTATGAGTTAGTTATATGGACACCCTTTTTCGAACCCCCATGTAGAATGTAAATGTTTCGGAAGAATGAAGAAATGAAAAACAGCATAGCATTCCGTTGGT

Coding sequence (CDS)

ATGGCTTCCCTTCTTGGAGTTACTGCAATTCATCATGCACCAAATCTTGATGTGTACAGAAGGATGGGAACAACGGCGACGGCATCACCGACGCCTTCTCTTTCTTTTGTTGACAAGTCCCACTTACTTGCCCTCAAAGTTCAAACTTGTTTCGGTGGTAGTAGCCGTCGCAACTTGTCCGGATTCACCTCTTCTGCAATTGCGACTCCCAATTCCATACTCAGCGAAGAGGCTTTTAGAAGTCTCGATGGCTTCTCTAAAAACTCCTTGGACGATAATCTCATCGACTCTGAACCCAATTCATCTCTTGCATTCTCTTCTGACGATGATGAGCTCGCCATTTCCAAATTAAACTTGCCCCAGCGGCTGACGGATTCTCTTCAGAAGCGTGGGATTACCAACCTCTTCCCTATTCAAAGAGCTGTTCTTGTCCCTGCATTAGAAGGTCGAGACCTCATTGCCCGTGCAAAGACTGGTACCGGGAAGACATTAGCTTTTGGGATACCAATTCTTAAAAAACTCACTGAAGATGATGAATCAAGAAGTTCGCGGAGGCGGTCTCGTCTTCCTAGAGTTTTGGTGTTAACTCCCACCAGGGAACTAGCCAAACAAGTGGAAAAAGAGATTAAGGAATCTGCACCTTATCTGAACACTGTTTGCGTTTATGGAGGAGTTTCATATGTTACACAGCAAAATGCTCTTTCTCGTGGAGTTGATGTGGTAGTTGGAACACCTGGTCGAATAATAGACCTAATAAATGGTAACAGCCTCAATTTGGGGGAAGTTGAATATTTAGTATTAGATGAAGCAGATCAGATGCTTGCTGTTGGGTTTGAGGAGGATGTGGAAGTAATTTTAGAAAAGCTTCCATCTCAGCGACAAAACATGCTTTTCTCTGCTACTATGCCAACGTGGGTTAAGAAACTTGCACGCAAATATTTGGAAAATCCATTGACCATAGATTTGGTTGGCGACCAGGATGAAAAGCTCGCTGAGGGGATCAAACTTCATGCCATATTAACGACTGCAACTTCAAAACAAACTATTCTCAGAGATCTTGTAACAGTTTATGCGAAGGGGGGAAAGACCATTGTTTTTACTCAGACAAAACGTGATGCTGATGAAGTCTCTTTGGCATTAGCTAATAGCATAACATCAGAAGCATTGCATGGCGATATATCACAGCATCAACGGGAAAGAACATTAAATGGCTTTCGGCAAGGGAAGTTCACTGTGCTGGTTGCAACTGATGTAGCTTCACGAGGACTGGATATCCCAAATGTTGATTTGGTTATCCATTATGAACTTCCTAATGATCCTGAGACTTTTGTACATCGCTCTGGCCGCACTGGGCGCGCAGGAAAAGAGGGTACTGCCATTTTAATGTTTACAAATAGTCAAAGGAGAACAGTTAGATCACTTGAGCGTGATGTGGGATGCAAATTTGAGTTTGCAAATCCACCTGCAATTGAGGAGGTTCTAGAATCATCAGCTGAGCAAGTGGTTGTTACTCTTCGGGGTGTTCATCCTGAATCTATTGAGTATTTCACTCCAACTGCACAGAAGTTAATTGATGAACAAGGACCAGGTGCTCTGGCGGCTGCACTTGCACAATTAAGTGGGTTCTCCCATCCTCCTTCATCACGGTCACTTATTAACCACGAACAGGGATGGGTGACATTGCAGCTGACCAGGGATCCATCTTATTCACGTGGGTTTTTGTCTGCTAGGTCTGTCACTGGATTTCTGTCTGACATCTATTCTCCAGCTGCAGACGAAATTGGAAAAATACATCTAATTGCAGATGAAAGGATAAATGGAGCAGTATTTGATCTTCCAGAGGAAATAGCAAAGGAGTTGCTGAATAAGGAACTGCCAGAAGGAAATACTCTTTTGAAGGTAACGAAGTTACCTCCTCTGCAGGACGATGGCCCACCAAGTGACAACTATGGAAGATTTTCTGGCAGAGAAAGAAATAGTCGAAATAGCTCTAGGGATCGCAGAGGTTTTAGAACATCAAGGGGCTGGGGAAGCAGTCGAGACTCTGATGATGATGGTGATATATTTAGTAGAAATCGCAGTTTTAGAACTAACAGCAGCAAGGGTCGGAATTTTAGAAGCTCGGGAGATGATTGGCTAATTGGAGGCAGACGATCAAGCAGGTCATCATCCGTGGATAGATTTGGCGGGTCCTGTTTTAATTGCGGAAGGATGGGACACAGGGCATCAGAATGCCCTGACAAGTGA

Protein sequence

MASLLGVTAIHHAPNLDVYRRMGTTATASPTPSLSFVDKSHLLALKVQTCFGGSSRRNLSGFTSSAIATPNSILSEEAFRSLDGFSKNSLDDNLIDSEPNSSLAFSSDDDELAISKLNLPQRLTDSLQKRGITNLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTLLKVTKLPPLQDDGPPSDNYGRFSGRERNSRNSSRDRRGFRTSRGWGSSRDSDDDGDIFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK

Homology

[Close]

BLAST of PI0006774 vs. ExPASy Swiss-Prot
Match: Q8L7S8 (DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RH3 PE=1 SV=2)

HSP 1 Score: 967.6 bits (2500), Expect = 8.0e-281
Identity = 538/759 (70.88%), Postives = 618/759 (81.42%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDVYRRMGTTATASPTPSLSFVDKSHLLALKVQTCFGGSSRR--N 60
           MAS +GV +++  P+L++ +    +   S   SLS +DK     L +       +RR  +
Sbjct: 1   MASTVGVPSLYQVPHLEISK--PNSKKRSNCLSLS-LDKPFFTPLSLVR----RTRRIHS 60

Query: 61  LSGFTSSAIATPNSILSEEAFRSLDGFSKNSLDDNLIDSEPNSSLAFSSDDDELAISKLN 120
            S    SA+ATPNS+LSEEAF+SL G S +  D+  +D + N+  A   D +ELAISKL+
Sbjct: 61  SSLLVPSAVATPNSVLSEEAFKSL-GLSDH--DEYDLDGDNNNVEA--DDGEELAISKLS 120

Query: 121 LPQRLTDSLQKRGITNLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDD 180
           LPQRL +SL+KRGIT+LFPIQRAVLVPAL+GRD+IARAKTGTGKTLAFGIPI+K+LTE+ 
Sbjct: 121 LPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEA 180

Query: 181 ESRSSRRRS-RLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRG 240
              ++ RRS RLP+ LVL PTRELAKQVEKEIKESAPYL+TVCVYGGVSY  QQ+AL+RG
Sbjct: 181 GDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALTRG 240

Query: 241 VDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNML 300
           VDVVVGTPGRIIDLI G SL LGEVEYLVLDEADQMLAVGFEE VE ILE LP++RQ+ML
Sbjct: 241 VDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSML 300

Query: 301 FSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVY 360
           FSATMPTWVKKLARKYL+NPL IDLVGDQDEKLAEGIKL+AI TT+TSK+TIL DL+TVY
Sbjct: 301 FSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVY 360

Query: 361 AKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATD 420
           AKGGKTIVFTQTKRDADEVSLAL+NSI +EALHGDISQHQRERTLN FRQGKFTVLVATD
Sbjct: 361 AKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATD 420

Query: 421 VASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERD 480
           VASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILM T+SQ+RTVRSLERD
Sbjct: 421 VASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERD 480

Query: 481 VGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALA 540
           VGC FEF +PP + ++LESSA+QVV TL GVHP+SI++F+ TAQKL +E+G  ALAAALA
Sbjct: 481 VGCHFEFISPPTVGDLLESSADQVVATLNGVHPDSIKFFSATAQKLYEEKGTDALAAALA 540

Query: 541 QLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKI 600
            LSGFS PPSSRSL++HE+GWVTLQL RDP+ +RGFLSARSVTGFLSD+Y  AADE+GKI
Sbjct: 541 HLSGFSQPPSSRSLLSHEKGWVTLQLIRDPTNARGFLSARSVTGFLSDLYRTAADEVGKI 600

Query: 601 HLIADERINGAVFDLPEEIAKELLNKELPEGNTLLKVTKLPPLQDDGPPSDNYGRFSGRE 660
            LIAD+RI GAVFDLPEEIAKELL K++PEGN+L  +TKLPPLQDDGP SDNYGRFS R+
Sbjct: 601 FLIADDRIQGAVFDLPEEIAKELLEKDVPEGNSLSMITKLPPLQDDGPSSDNYGRFSSRD 660

Query: 661 RNSRNSSRDRRGFRTSRGWGSSRDSDD---DGDIFSRNRSFRTN--SSKGRNFRSSGDDW 720
           R  R      RG R  RG GSSR  D    D D  SR  S   +  S  G + R S DDW
Sbjct: 661 RMPRGGG-GSRGSRGGRG-GSSRGRDSWGGDDDRGSRRSSGGGSSWSRGGSSSRGSSDDW 720

Query: 721 LIGGRRSSRSSSVDR---FGGSCFNCGRMGHRASECPDK 749
           LIGGR SS S +  R   FGGSCF CG+ GHRA++CPDK
Sbjct: 721 LIGGRSSSSSRAPSRERSFGGSCFICGKSGHRATDCPDK 745

[Close]

BLAST of PI0006774 vs. ExPASy Swiss-Prot
Match: Q0DM51 (DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0827700 PE=2 SV=2)

HSP 1 Score: 934.9 bits (2415), Expect = 5.8e-271
Identity = 511/760 (67.24%), Postives = 589/760 (77.50%), Query Frame = 0


Query: 28  ASPTPSLSFVDKSHLLALKVQTCFGGSSRRNLSG---FTSSAIATPNSILSEEAFRSLD- 87
           ++P+ S +        +L+++  F   + R   G     + AIA+PNS+LSE AF+ L  
Sbjct: 13  SNPSASAAAAGAGAAPSLRLRAAFRCWALRRAGGGRWAAAGAIASPNSVLSEHAFKRLQL 72

Query: 88  GFSKNSLDDNLIDSEPNSSLAF---SSDDDELAISKLNLPQRLTDSLQKRGITNLFPIQR 147
              +   ++    S+     A      D+DELAI++L LP++L  +L+KRGIT+LFPIQR
Sbjct: 73  SDEEEEEEEGAYGSDEEGVEAVGGGEGDEDELAIARLGLPEQLVSTLEKRGITHLFPIQR 132

Query: 148 AVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDESRSSRRRSRLPRVLVLTPTRE 207
           AVL+PAL+GRDLIARAKTGTGKTLAFGIP++K+L E+D+ RS  RR R+PRVLVL PTRE
Sbjct: 133 AVLIPALDGRDLIARAKTGTGKTLAFGIPMIKQLMEEDDGRSV-RRGRIPRVLVLAPTRE 192

Query: 208 LAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPGRIIDLINGNSLNLG 267
           LAKQVEKEIKESAP L+TVCVYGGVSY  QQNALSRGVDVVVGTPGRIIDLING SL LG
Sbjct: 193 LAKQVEKEIKESAPKLSTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLG 252

Query: 268 EVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSATMPTWVKKLARKYLENPLTI 327
           EV+YLVLDEADQMLAVGFEEDVE IL++LP++RQ+MLFSATMP WVKKL+R+YL NPLTI
Sbjct: 253 EVKYLVLDEADQMLAVGFEEDVETILQQLPAERQSMLFSATMPGWVKKLSRRYLNNPLTI 312

Query: 328 DLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLAL 387
           DLVGDQDEKLAEGIKL+AI  T+TSK+T+L DL+TVYAKGGKTIVFT+TKRDADEVSLAL
Sbjct: 313 DLVGDQDEKLAEGIKLYAIPLTSTSKRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLAL 372

Query: 388 ANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDP 447
            NSI SEALHGDISQHQRERTLNGFRQGKFTVLVATDVA+RGLDIPNVDL+IHYELPNDP
Sbjct: 373 TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 432

Query: 448 ETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQ 507
           ETFVHRSGRTGRAGK GTAILMFTNSQRRTVRSLERDVGC+F+F +PPAIE+VLESSAE 
Sbjct: 433 ETFVHRSGRTGRAGKAGTAILMFTNSQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEH 492

Query: 508 VVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVT 567
           V+ TLRGVH ESI+YF P A++L +E GP ALA+ALA LSGFS PPSSRSLI+HEQGWVT
Sbjct: 493 VIATLRGVHTESIQYFIPAAERLQEELGPNALASALAHLSGFSQPPSSRSLISHEQGWVT 552

Query: 568 LQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLIADERINGAVFDLPEEIAKEL 627
           LQLTRDP Y RGF S RSVTGFLSD+ S AADE+GKI L ADE++ GAVFDLPEEIA++L
Sbjct: 553 LQLTRDPGYGRGFFSPRSVTGFLSDVSSAAADEVGKIFLTADEKVQGAVFDLPEEIARDL 612

Query: 628 LNKELPEGNTLLKVTKLPPLQDDGPPSDNYGRFSGRERNSRNSSRDRRGFRTSRGWGSSR 687
           L+ ELP GNT+ KVTKLP LQDDGP +D+YGRFS  +R  RN  R R G   SRG     
Sbjct: 613 LSMELPPGNTITKVTKLPALQDDGPATDSYGRFSNSDRGFRN-RRSRGG--GSRGGRGGW 672

Query: 688 DSDDDGDIFSRNRSFRTNSSKGRNFRSSGDDW----LIGGRRSSRSSSVD---------- 747
           DSD + D F R          GR+FRS  D W      GGRRS+RSSS            
Sbjct: 673 DSDGE-DRFRRG---------GRSFRSDNDSWSDDDFGGGRRSNRSSSFGGRGSSYGSRS 732

Query: 748 ------------------RFGGSCFNCGRMGHRASECPDK 749
                              F G+CFNCG  GHRAS+CP+K
Sbjct: 733 SSSFGGRSSSFGSRDSSRSFSGACFNCGESGHRASDCPNK 758

[Close]

BLAST of PI0006774 vs. ExPASy Swiss-Prot
Match: A0A1D6GDY8 (DEAD-box ATP-dependent RNA helicase 3A, chloroplastic OS=Zea mays OX=4577 GN=RH3A PE=3 SV=1)

HSP 1 Score: 921.4 bits (2380), Expect = 6.6e-267
Identity = 497/716 (69.41%), Postives = 568/716 (79.33%), Query Frame = 0


Query: 64  SSAIATPNSILSEEAFRSLDGFSKNSLDDNLIDSEPNSSLAFSSDDDELAISKLNLPQRL 123
           ++A+A+PNS+LSE AF+ L   S +  ++    S+ +    F  D++ELAI++L LP  L
Sbjct: 42  AAAVASPNSVLSEHAFKRLQLGSDDEDEEGPYGSDADE--GFQGDEEELAIARLGLPDEL 101

Query: 124 TDSLQKRGITNLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDESRSS 183
             +L+KRGIT+LFPIQRAVL+PAL GRDLIARAKTGTGKTLAFGIP++K+L E D+ RS+
Sbjct: 102 VATLEKRGITHLFPIQRAVLIPALGGRDLIARAKTGTGKTLAFGIPMIKQLMEQDDGRST 161

Query: 184 RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVG 243
            RR R PRVLVL PTRELAKQVEKEIKESAP L TVCVYGGVSY  QQNALSRGVDVVVG
Sbjct: 162 -RRGRTPRVLVLAPTRELAKQVEKEIKESAPKLGTVCVYGGVSYNVQQNALSRGVDVVVG 221

Query: 244 TPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSATMP 303
           TPGRIIDLING SL LGEV+YLVLDEADQMLAVGFEEDVE IL++LP+ RQ+MLFSATMP
Sbjct: 222 TPGRIIDLINGGSLQLGEVQYLVLDEADQMLAVGFEEDVETILQQLPADRQSMLFSATMP 281

Query: 304 TWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKGGKT 363
           +WVKKL+R+YL NPLTIDLVGDQDEKLAEGIKLHAI  TATSK+TIL DL+TVYAKGGKT
Sbjct: 282 SWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLHAIPLTATSKRTILSDLITVYAKGGKT 341

Query: 364 IVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGL 423
           IVFT+TK+DADEVSLAL  SI SEALHGDISQHQRERTLNGFRQGKFTVLVATDVA+RGL
Sbjct: 342 IVFTRTKKDADEVSLALTTSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGL 401

Query: 424 DIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGCKFE 483
           DIPNVDL+IHYELPNDPETFVHRSGRTGRAGK GTAILMFT+SQ+RTV SLERDVGCKFE
Sbjct: 402 DIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTSSQKRTVMSLERDVGCKFE 461

Query: 484 FANPPAIEEVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLSGFS 543
           F +PP+IEEVLESSAE V+ TLRGVHPES +YF   A+KL +E GP ALA+ALA LSGFS
Sbjct: 462 FISPPSIEEVLESSAEHVIATLRGVHPESTQYFLGAAEKLTEELGPHALASALAHLSGFS 521

Query: 544 HPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLIADE 603
            PPSSRSLI++EQGWVTLQLTR+P Y RGF S RSVTGFLSD+ S AADE+GKI++ ADE
Sbjct: 522 QPPSSRSLISYEQGWVTLQLTREPGYGRGFFSPRSVTGFLSDVCSAAADEVGKIYITADE 581

Query: 604 RINGAVFDLPEEIAKELLNKELPEGNTLLKVTKLPPLQDDGPPSDNYGRFSGRERNSRNS 663
            + GAVFDLPEEIAK+LL  E+P GNTL K++KLP LQDD P +D+YGRFS  +R SRN 
Sbjct: 582 NVQGAVFDLPEEIAKDLLTMEVPPGNTLTKISKLPALQDDSPATDSYGRFS-NDRGSRN- 641

Query: 664 SRDRRGFRTSRGWGSSRDSDDDGDIFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSSRSS 723
            R  RG   SRG G   D+D +       RS R++     N   S DDW  GGR+S+RSS
Sbjct: 642 -RRSRGGGASRGRG-GWDTDSEDRYRRGGRSLRSD-----NDSWSDDDWSGGGRKSNRSS 701

Query: 724 -------------------------------SVDRFGGSCFNCGRMGHRASECPDK 749
                                          S   F G+CFNCG  GHRAS+CP+K
Sbjct: 702 SSFGGRSSSYGSRGSPSPSFGVRSSSLGGRESSRSFSGACFNCGESGHRASDCPNK 745

[Close]

BLAST of PI0006774 vs. ExPASy Swiss-Prot
Match: A0A1D6LAB7 (DEAD-box ATP-dependent RNA helicase 3B, chloroplastic OS=Zea mays OX=4577 GN=RH3B PE=2 SV=1)

HSP 1 Score: 917.9 bits (2371), Expect = 7.3e-266
Identity = 495/714 (69.33%), Postives = 567/714 (79.41%), Query Frame = 0


Query: 64  SSAIATPNSILSEEAFRSLDGFSKNSLDDNLIDSEPNSSL-AFSSDDDELAISKLNLPQR 123
           + A+A+PNS+LSE AF+ L   S +   +    S+ +    A   D++ELAI++L LP  
Sbjct: 39  AGALASPNSVLSEHAFKRLQLGSDDEDGEGPYGSDADEGFEAGEGDNEELAIARLGLPDE 98

Query: 124 LTDSLQKRGITNLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDESRS 183
           L  +L+KRGIT+LFPIQRAVL+PALEGRDLIARAKTGTGKTLAFGIP++K+L E D+ R 
Sbjct: 99  LVATLEKRGITHLFPIQRAVLIPALEGRDLIARAKTGTGKTLAFGIPMIKQLIEQDDGRI 158

Query: 184 SRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVV 243
           + RR R PRVLVL PTRELAKQVEKEIKESAP L TVCVYGGVSY  QQNALSRGVDVVV
Sbjct: 159 T-RRGRTPRVLVLAPTRELAKQVEKEIKESAPKLGTVCVYGGVSYNVQQNALSRGVDVVV 218

Query: 244 GTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSATM 303
           GTPGRIIDLING SL LGEV+YLVLDEADQMLAVGFEEDVE IL++LP+ RQ+MLFSATM
Sbjct: 219 GTPGRIIDLINGGSLQLGEVQYLVLDEADQMLAVGFEEDVETILQQLPAGRQSMLFSATM 278

Query: 304 PTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKGGK 363
           P+WVKKL+R+YL NPLTIDLVGDQDEKLAEGIKL+AI  T TSK+T+L DL+TVYAKGGK
Sbjct: 279 PSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTTTSKRTVLSDLITVYAKGGK 338

Query: 364 TIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRG 423
           TIVFT+TK+DADEVSLAL NSI SEALHGDISQHQRERTLNGFRQGKFTVLVATDVA+RG
Sbjct: 339 TIVFTRTKKDADEVSLALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARG 398

Query: 424 LDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGCKF 483
           LDIPNVDL+IHYELPNDPETFVHRSGRTGRAGK GTAILMFT+SQ+RTV+SLERDVGC F
Sbjct: 399 LDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTSSQKRTVKSLERDVGCNF 458

Query: 484 EFANPPAIEEVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLSGF 543
           EF +PP+IEEVLESSAE V+ TLRGVHPES +YF   A+KL +E GP ALA+ALA LSGF
Sbjct: 459 EFISPPSIEEVLESSAEHVIATLRGVHPESTKYFLGAAEKLTEELGPHALASALAHLSGF 518

Query: 544 SHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLIAD 603
           S PPSSRSLI+HEQGWVTLQLTR+  + RGF S RSVTGFLSD+ S AADE+GKI+L AD
Sbjct: 519 SQPPSSRSLISHEQGWVTLQLTREQGFGRGFFSPRSVTGFLSDVCSAAADEVGKIYLTAD 578

Query: 604 ERINGAVFDLPEEIAKELLNKELPEGNTLLKVTKLPPLQDDGPPSDNYGRFSGRERNSRN 663
           E + GAVFDLPEEIAK+LL  ELP GNTL K++KLP LQDDGP +D+YGRFS  +R SRN
Sbjct: 579 ENVQGAVFDLPEEIAKDLLTMELPPGNTLTKISKLPALQDDGPATDSYGRFS-NDRGSRN 638

Query: 664 SSRDRRGFRTSRGWGSSRDSDDDGDIFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSSRS 723
           + R R G   SRG G   D+D +       RS R++     N   S DDW  GGR+S+RS
Sbjct: 639 NRRSRGG-GASRGRG-GWDTDGEDRFRRGGRSLRSD-----NDSWSDDDWSGGGRKSNRS 698

Query: 724 SSVD----------------------------RFGGSCFNCGRMGHRASECPDK 749
           SS                               F G+CFNCG  GHRA++CP+K
Sbjct: 699 SSFGSRSSSYSSRGSPSFGGRSSSFGGRESNRSFSGACFNCGESGHRATDCPNK 743

[Close]

BLAST of PI0006774 vs. ExPASy Swiss-Prot
Match: Q9LUW5 (DEAD-box ATP-dependent RNA helicase 53, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RH53 PE=1 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 1.2e-130
Identity = 237/392 (60.46%), Postives = 298/392 (76.02%), Query Frame = 0


Query: 110 DELAISKLNLPQRLTDSLQKRGITNLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIP 169
           D LAIS+L +   +  +L  +GI  LFPIQ+AVL PA+EGRD+I RA+TGTGKTLAFGIP
Sbjct: 102 DGLAISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIP 161

Query: 170 ILKKLTEDDESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVT 229
           I+ K+    +  +   R R P  LVL PTRELA+QVEKE +ESAP L+T+C+YGG     
Sbjct: 162 IIDKII---KYNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQ 221

Query: 230 QQNALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKL 289
           Q   L  GVDV VGTPGR+IDL+   +LNL EV+++VLDEADQML VGF EDVE+ILEKL
Sbjct: 222 QMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKL 281

Query: 290 PSQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTI 349
           P +RQ+M+FSATMP+W++ L +KYL NPLT+DLVGD D+KLA+GI  ++I+  +  + +I
Sbjct: 282 PEKRQSMMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASI 341

Query: 350 LRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGK 409
           +  LVT +AKGGK IVFTQTKRDAD +S ALA S   EALHGDISQ QRERTL GFR G 
Sbjct: 342 IGPLVTEHAKGGKCIVFTQTKRDADRLSYALARSFKCEALHGDISQSQRERTLAGFRDGH 401

Query: 410 FTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRR 469
           F +LVATDVA+RGLD+PNVDL+IHYELPN+ ETFVHR+GRTGRAGK+G+AIL+++  Q R
Sbjct: 402 FNILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSR 461

Query: 470 TVRSLERDVGCKFEFANPPAIEEVLESSAEQV 502
            V+ +ER+VG +F      A+E    S  E +
Sbjct: 462 AVKIIEREVGSRFTELPSIAVERGSASMFEGI 490

[Close]

BLAST of PI0006774 vs. ExPASy TrEMBL
Match: A0A1S3BQ06 (RNA helicase OS=Cucumis melo OX=3656 GN=LOC103492086 PE=3 SV=1)

HSP 1 Score: 1425.2 bits (3688), Expect = 0.0e+00
Identity = 733/748 (97.99%), Postives = 744/748 (99.47%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDVYRRMGTTATASPTPSLSFVDKSHLLALKVQTCFGGSSRRNLS 60
           MASLLGVTAIHHAPNLD+YRRMGTTATASPTPSLSFVDKSHL+ALKVQTCF GSSRRNLS
Sbjct: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60

Query: 61  GFTSSAIATPNSILSEEAFRSLDGFSKNSLDDNLIDSEPNSSLAFSSDDDELAISKLNLP 120
           GFTSSAIATPNSILSEEAFRSLDGFSK+ LDDNLID EPNSSLAFS+DDDELAISKLNLP
Sbjct: 61  GFTSSAIATPNSILSEEAFRSLDGFSKDPLDDNLIDPEPNSSLAFSADDDELAISKLNLP 120

Query: 121 QRLTDSLQKRGITNLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES 180
           QRLTD+LQKRGIT+LFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES
Sbjct: 121 QRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES 180

Query: 181 RSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV 240
           RS RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV
Sbjct: 181 RSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV 240

Query: 241 VVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA 300
           VVGTPGR+IDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA
Sbjct: 241 VVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA 300

Query: 301 TMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG 360
           TMPTWVKKLARKYL+NPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG
Sbjct: 301 TMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG 360

Query: 361 GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 420
           GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS
Sbjct: 361 GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 420

Query: 421 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC 480
           RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC
Sbjct: 421 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC 480

Query: 481 KFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS 540
           KFEFANPPAIE+VLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS
Sbjct: 481 KFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS 540

Query: 541 GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI 600
           GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI
Sbjct: 541 GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI 600

Query: 601 ADERINGAVFDLPEEIAKELLNKELPEGNTLLKVTKLPPLQDDGPPSDNYGRFSGRERNS 660
           ADERINGAVFDLPEEIAKELLNKELPEGNT+LKVTKLPPLQDDGPPSDNYGRFSGRERNS
Sbjct: 601 ADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNS 660

Query: 661 RNSSRDRRGFRTSRGWGSSRDSDDDGDIFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS 720
           RNSSRDRRGFRTSRGWGSSRDSDDDGD+FSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS
Sbjct: 661 RNSSRDRRGFRTSRGWGSSRDSDDDGDMFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS 720

Query: 721 RSSSVDRFGGSCFNCGRMGHRASECPDK 749
           RSSSVDRFGGSCFNCGRMGHRASECPDK
Sbjct: 721 RSSSVDRFGGSCFNCGRMGHRASECPDK 748

[Close]

BLAST of PI0006774 vs. ExPASy TrEMBL
Match: A0A0A0M1E9 (RNA helicase OS=Cucumis sativus OX=3659 GN=Csa_1G560830 PE=3 SV=1)

HSP 1 Score: 1399.8 bits (3622), Expect = 0.0e+00
Identity = 718/748 (95.99%), Postives = 739/748 (98.80%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDVYRRMGTTATASPTPSLSFVDKSHLLALKVQTCFGGSSRRNLS 60
           MASLLGVTAI HAPNLD+YRR GTTATASPTPSLSFVDKSHL+ALKVQTCF GSSRRNLS
Sbjct: 1   MASLLGVTAILHAPNLDLYRRTGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60

Query: 61  GFTSSAIATPNSILSEEAFRSLDGFSKNSLDDNLIDSEPNSSLAFSSDDDELAISKLNLP 120
           GFTSSAIATPNSILSEEAFRS DGFS++SLDDNLID EPNSSLAF++DDDELAISKLNLP
Sbjct: 61  GFTSSAIATPNSILSEEAFRSFDGFSEDSLDDNLIDPEPNSSLAFAADDDELAISKLNLP 120

Query: 121 QRLTDSLQKRGITNLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES 180
           QRLTD+LQKRGIT+LFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES
Sbjct: 121 QRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES 180

Query: 181 RSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV 240
           RS RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSY+TQQNALSRGVDV
Sbjct: 181 RSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYITQQNALSRGVDV 240

Query: 241 VVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA 300
           VVGTPGR+IDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA
Sbjct: 241 VVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA 300

Query: 301 TMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG 360
           TMPTWVKKLARKYL+NPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG
Sbjct: 301 TMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG 360

Query: 361 GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 420
           GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS
Sbjct: 361 GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 420

Query: 421 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC 480
           RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC
Sbjct: 421 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC 480

Query: 481 KFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS 540
           KFEFANPP +EEVL+SSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQG GALAAALAQLS
Sbjct: 481 KFEFANPPGMEEVLKSSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGLGALAAALAQLS 540

Query: 541 GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI 600
           GF+HPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSD+YSPAADEIGKIHLI
Sbjct: 541 GFTHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDVYSPAADEIGKIHLI 600

Query: 601 ADERINGAVFDLPEEIAKELLNKELPEGNTLLKVTKLPPLQDDGPPSDNYGRFSGRERNS 660
           ADERINGAVFDLPEEIAKELLNKELPEGNT+LK+TKLPPLQDDGPPSDNYGRFSGRER+S
Sbjct: 601 ADERINGAVFDLPEEIAKELLNKELPEGNTILKITKLPPLQDDGPPSDNYGRFSGRERSS 660

Query: 661 RNSSRDRRGFRTSRGWGSSRDSDDDGDIFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS 720
           RNSSRDRRG +TSRGWGSSRDSDD+GDIFSRNRSFRTN+SKGRNFRSSGDDWLIGGRRSS
Sbjct: 661 RNSSRDRRGLKTSRGWGSSRDSDDNGDIFSRNRSFRTNNSKGRNFRSSGDDWLIGGRRSS 720

Query: 721 RSSSVDRFGGSCFNCGRMGHRASECPDK 749
           RSSSVDRFGGSCFNCGRMGHRASECPDK
Sbjct: 721 RSSSVDRFGGSCFNCGRMGHRASECPDK 748

[Close]

BLAST of PI0006774 vs. ExPASy TrEMBL
Match: A0A5D3CJA2 (RNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004730 PE=3 SV=1)

HSP 1 Score: 1377.1 bits (3563), Expect = 0.0e+00
Identity = 712/727 (97.94%), Postives = 723/727 (99.45%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDVYRRMGTTATASPTPSLSFVDKSHLLALKVQTCFGGSSRRNLS 60
           MASLLGVTAIHHAPNLD+YRRMGTTATASPTPSLSFVDKSHL+ALKVQTCF GSSRRNLS
Sbjct: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60

Query: 61  GFTSSAIATPNSILSEEAFRSLDGFSKNSLDDNLIDSEPNSSLAFSSDDDELAISKLNLP 120
           GFTSSAIATPNSILSEEAFRSLDGFSK+ LDDNLID EPNSSLAFS+DDDELAISKLNLP
Sbjct: 61  GFTSSAIATPNSILSEEAFRSLDGFSKDPLDDNLIDPEPNSSLAFSADDDELAISKLNLP 120

Query: 121 QRLTDSLQKRGITNLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES 180
           QRLTD+LQKRGIT+LFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES
Sbjct: 121 QRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES 180

Query: 181 RSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV 240
           RS RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV
Sbjct: 181 RSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV 240

Query: 241 VVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA 300
           VVGTPGR+IDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA
Sbjct: 241 VVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA 300

Query: 301 TMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG 360
           TMPTWVKKLARKYL+NPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG
Sbjct: 301 TMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG 360

Query: 361 GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 420
           GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS
Sbjct: 361 GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 420

Query: 421 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC 480
           RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC
Sbjct: 421 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC 480

Query: 481 KFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS 540
           KFEFANPPAIE+VLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS
Sbjct: 481 KFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS 540

Query: 541 GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI 600
           GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI
Sbjct: 541 GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI 600

Query: 601 ADERINGAVFDLPEEIAKELLNKELPEGNTLLKVTKLPPLQDDGPPSDNYGRFSGRERNS 660
           ADERINGAVFDLPEEIAKELLNKELPEGNT+LKVTKLPPLQDDGPPSDNYGRFSGRERNS
Sbjct: 601 ADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNS 660

Query: 661 RNSSRDRRGFRTSRGWGSSRDSDDDGDIFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS 720
           RNSSRDRRGFRTSRGWGSSRDSDDDGD+FSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS
Sbjct: 661 RNSSRDRRGFRTSRGWGSSRDSDDDGDMFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS 720

Query: 721 RSSSVDR 728
           RSSSVDR
Sbjct: 721 RSSSVDR 727

[Close]

BLAST of PI0006774 vs. ExPASy TrEMBL
Match: A0A6J1DUC8 (RNA helicase OS=Momordica charantia OX=3673 GN=LOC111024523 PE=3 SV=1)

HSP 1 Score: 1331.6 bits (3445), Expect = 0.0e+00
Identity = 693/765 (90.59%), Postives = 723/765 (94.51%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDVYRRMGTTATASPTPSLSFVDKSHLLALKVQTCFGGSSRRNL- 60
           MAS+LGVTAIHHAPNLD+YRRMGT AT SPTPSLSF DKSH+ A K QT F   SRRNL 
Sbjct: 1   MASILGVTAIHHAPNLDIYRRMGTAATPSPTPSLSFADKSHINASKAQTSFSSGSRRNLA 60

Query: 61  -----------SGFTSSAIATPNSILSEEAFRSLDGFSKNSLDDNLIDSEPNSSLAFS-- 120
                      SGF+SSAIATPNSILSEEAF+SLDGFSK    D+ IDS+PNSSL FS  
Sbjct: 61  FSDGSSAGTFKSGFSSSAIATPNSILSEEAFKSLDGFSK----DDFIDSQPNSSLGFSAD 120

Query: 121 --SDDDELAISKLNLPQRLTDSLQKRGITNLFPIQRAVLVPALEGRDLIARAKTGTGKTL 180
             +D+DELAISKL LPQRLT+SL+KRGIT+LFPIQRAVLVPALEGRDLIARAKTGTGKTL
Sbjct: 121 SPADEDELAISKLGLPQRLTESLEKRGITSLFPIQRAVLVPALEGRDLIARAKTGTGKTL 180

Query: 181 AFGIPILKKLTEDDESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGG 240
           AFGIPI+K+LTEDDE RSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGG
Sbjct: 181 AFGIPIIKRLTEDDELRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGG 240

Query: 241 VSYVTQQNALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEV 300
           VSYVTQQNAL+RGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEV
Sbjct: 241 VSYVTQQNALTRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEV 300

Query: 301 ILEKLPSQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTAT 360
           IL+KLP+QRQNMLFSATMPTWVKKLARKYLENPLTIDLVG QDEKLAEGIKL+AILTTAT
Sbjct: 301 ILQKLPTQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGXQDEKLAEGIKLYAILTTAT 360

Query: 361 SKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG 420
           SKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG
Sbjct: 361 SKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG 420

Query: 421 FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 480
           FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILMFT
Sbjct: 421 FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFT 480

Query: 481 NSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEYFTPTAQKLI 540
           NSQRRTVRSLERDVGCKFEFANPPAIE+VLESSAEQVV TLRGVHPESIE+FTPTAQKLI
Sbjct: 481 NSQRRTVRSLERDVGCKFEFANPPAIEDVLESSAEQVVATLRGVHPESIEFFTPTAQKLI 540

Query: 541 DEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS 600
           DEQG GALAAALAQLSGFSHPPSSRSLI+HEQGWVTLQLTRDPSYSRGFLSARSVTGFLS
Sbjct: 541 DEQGAGALAAALAQLSGFSHPPSSRSLISHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS 600

Query: 601 DIYSPAADEIGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTLLKVTKLPPLQDDG 660
           DIYSPAADE+GKIHLIADERI+GAVFDLPEEIAKELLNK LPEGNT+LKVTKLPPLQDDG
Sbjct: 601 DIYSPAADEVGKIHLIADERIHGAVFDLPEEIAKELLNKPLPEGNTILKVTKLPPLQDDG 660

Query: 661 PPSDNYGRFSGRERNSRNSSRDRRGFRTSRGWGSSRDSDDDGDIFSRNRSFRT-NSSKGR 720
           PPSDNYGRFSGRERNSRN+SRDRRGFRTSRGWGS RDSDDDGD+FSRNRSFRT NSS+ R
Sbjct: 661 PPSDNYGRFSGRERNSRNNSRDRRGFRTSRGWGSGRDSDDDGDLFSRNRSFRTNNSSRSR 720

Query: 721 NFRSSGDDWLIGGRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK 749
           NF+SSGDDWLIGGRRSSRSSS+D FGGSCFNCGRMGHRASECPDK
Sbjct: 721 NFKSSGDDWLIGGRRSSRSSSMDGFGGSCFNCGRMGHRASECPDK 761

[Close]

BLAST of PI0006774 vs. ExPASy TrEMBL
Match: A0A6J1I2F6 (RNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111468402 PE=3 SV=1)

HSP 1 Score: 1320.8 bits (3417), Expect = 0.0e+00
Identity = 692/756 (91.53%), Postives = 724/756 (95.77%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDVYRRMGT--TATASPTPSLSFVDKSHLLALKVQTCF---GGSS 60
           MAS+LGVTAIHHAPNLD+YRRMGT  TAT S +PSLSF DKSH  +LK  T       SS
Sbjct: 1   MASILGVTAIHHAPNLDMYRRMGTPATATVSSSPSLSFADKSHFNSLKSLTSLSSSSSSS 60

Query: 61  RRNLSGFTSSAIATPNSILSEEAFRSLDGFSKNSLDDN-LIDSEPNSSLAFSSDDDELAI 120
           RRNLSGF+SSAIATPNSILSEEAFRSLDGFSK+SLDDN LIDSE NSSLAF SDDDELAI
Sbjct: 61  RRNLSGFSSSAIATPNSILSEEAFRSLDGFSKDSLDDNGLIDSEANSSLAF-SDDDELAI 120

Query: 121 SKLNLPQRLTDSLQKRGITNLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKL 180
           SKL LPQRL+D+L+KRGIT LF IQRAVLVPALEGRDLIARAKTGTGKTLAFGIPI+KK+
Sbjct: 121 SKLGLPQRLSDALEKRGITQLFAIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKKI 180

Query: 181 TEDDESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNAL 240
           TEDDE +S RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQ+AL
Sbjct: 181 TEDDELKSPRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQSAL 240

Query: 241 SRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQ 300
           SRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQ
Sbjct: 241 SRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQ 300

Query: 301 NMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLV 360
           NMLFSATMPTWVKKLARKYL+NPLTIDLVGDQDEKLAEGIKL+AILTTATSKQTILRDLV
Sbjct: 301 NMLFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLYAILTTATSKQTILRDLV 360

Query: 361 TVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLV 420
           TVYAKGGKTIVFT+TKRDADEVSLALAN+ITSEALHGDISQHQRERTLNGFRQGKFTVLV
Sbjct: 361 TVYAKGGKTIVFTRTKRDADEVSLALANTITSEALHGDISQHQRERTLNGFRQGKFTVLV 420

Query: 421 ATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSL 480
           ATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSL
Sbjct: 421 ATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSL 480

Query: 481 ERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAA 540
           ERDVGCKFEFANPP IE+VLESSAEQVV+TLRGVHPESIE+FTPTAQKLIDEQG GALAA
Sbjct: 481 ERDVGCKFEFANPPGIEKVLESSAEQVVITLRGVHPESIEFFTPTAQKLIDEQGAGALAA 540

Query: 541 ALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEI 600
           ALAQLSGFS PPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSD+YSPAADE+
Sbjct: 541 ALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDVYSPAADEV 600

Query: 601 GKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTLLKVTKLPPLQDDGPPSDNYGRFS 660
           GKIHLIADERINGAVFDLPEEIAKELLNK+LPEGNTLLK+TKLPPLQDDGPPSD+YGRFS
Sbjct: 601 GKIHLIADERINGAVFDLPEEIAKELLNKDLPEGNTLLKITKLPPLQDDGPPSDSYGRFS 660

Query: 661 GRERNSRNSSRDRRGFRTSRGW-GSSRDSDDDGDIFSRNRSFRTNSSKGRNFRSSGDDWL 720
           GRER+SRNSSRDRRG RTSRGW GSSRDSDDDGD+FSRNR FR+NSS+GRNF+SSGDDWL
Sbjct: 661 GRERSSRNSSRDRRGSRTSRGWGGSSRDSDDDGDLFSRNRGFRSNSSRGRNFKSSGDDWL 720

Query: 721 IGG--RRSSRSSSVDRFGGSCFNCGRMGHRASECPD 748
           IGG  RRSSRSSS+DRFGGSCFNCGRMGHRASECP+
Sbjct: 721 IGGGSRRSSRSSSMDRFGGSCFNCGRMGHRASECPN 755

[Close]

BLAST of PI0006774 vs. NCBI nr
Match: XP_008450498.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Cucumis melo])

HSP 1 Score: 1425.2 bits (3688), Expect = 0.0e+00
Identity = 733/748 (97.99%), Postives = 744/748 (99.47%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDVYRRMGTTATASPTPSLSFVDKSHLLALKVQTCFGGSSRRNLS 60
           MASLLGVTAIHHAPNLD+YRRMGTTATASPTPSLSFVDKSHL+ALKVQTCF GSSRRNLS
Sbjct: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60

Query: 61  GFTSSAIATPNSILSEEAFRSLDGFSKNSLDDNLIDSEPNSSLAFSSDDDELAISKLNLP 120
           GFTSSAIATPNSILSEEAFRSLDGFSK+ LDDNLID EPNSSLAFS+DDDELAISKLNLP
Sbjct: 61  GFTSSAIATPNSILSEEAFRSLDGFSKDPLDDNLIDPEPNSSLAFSADDDELAISKLNLP 120

Query: 121 QRLTDSLQKRGITNLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES 180
           QRLTD+LQKRGIT+LFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES
Sbjct: 121 QRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES 180

Query: 181 RSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV 240
           RS RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV
Sbjct: 181 RSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV 240

Query: 241 VVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA 300
           VVGTPGR+IDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA
Sbjct: 241 VVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA 300

Query: 301 TMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG 360
           TMPTWVKKLARKYL+NPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG
Sbjct: 301 TMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG 360

Query: 361 GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 420
           GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS
Sbjct: 361 GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 420

Query: 421 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC 480
           RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC
Sbjct: 421 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC 480

Query: 481 KFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS 540
           KFEFANPPAIE+VLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS
Sbjct: 481 KFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS 540

Query: 541 GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI 600
           GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI
Sbjct: 541 GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI 600

Query: 601 ADERINGAVFDLPEEIAKELLNKELPEGNTLLKVTKLPPLQDDGPPSDNYGRFSGRERNS 660
           ADERINGAVFDLPEEIAKELLNKELPEGNT+LKVTKLPPLQDDGPPSDNYGRFSGRERNS
Sbjct: 601 ADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNS 660

Query: 661 RNSSRDRRGFRTSRGWGSSRDSDDDGDIFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS 720
           RNSSRDRRGFRTSRGWGSSRDSDDDGD+FSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS
Sbjct: 661 RNSSRDRRGFRTSRGWGSSRDSDDDGDMFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS 720

Query: 721 RSSSVDRFGGSCFNCGRMGHRASECPDK 749
           RSSSVDRFGGSCFNCGRMGHRASECPDK
Sbjct: 721 RSSSVDRFGGSCFNCGRMGHRASECPDK 748

[Close]

BLAST of PI0006774 vs. NCBI nr
Match: XP_038879136.1 (DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Benincasa hispida])

HSP 1 Score: 1403.3 bits (3631), Expect = 0.0e+00
Identity = 725/753 (96.28%), Postives = 742/753 (98.54%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDVYRRMGTTATASPTPSLSFVDKSHLLALKVQTCFGGSSRRNLS 60
           MASLLGVTAIHHAPNLD+YRRMGTTATASPTPSLSF +KSHL+ALK QTCF GSSRRNLS
Sbjct: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFAEKSHLIALKAQTCFSGSSRRNLS 60

Query: 61  GFT-SSAIATPNSILSEEAFRSLDGFSKNSLDDNLIDSEPNSSLAFS----SDDDELAIS 120
           GFT SSAIATPNSILSEEAFRSLDGFSK+SLD NL+DSE NSSLAFS    +DDDELAIS
Sbjct: 61  GFTSSSAIATPNSILSEEAFRSLDGFSKDSLDGNLVDSESNSSLAFSTAPPADDDELAIS 120

Query: 121 KLNLPQRLTDSLQKRGITNLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLT 180
           KLNLPQRLTD+LQKRGIT+LFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLT
Sbjct: 121 KLNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLT 180

Query: 181 EDDESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALS 240
           EDDE RSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSY+TQQNALS
Sbjct: 181 EDDELRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYITQQNALS 240

Query: 241 RGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQN 300
           RGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQ+
Sbjct: 241 RGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQS 300

Query: 301 MLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT 360
           MLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT
Sbjct: 301 MLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT 360

Query: 361 VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVA 420
           VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVA
Sbjct: 361 VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVA 420

Query: 421 TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLE 480
           TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLE
Sbjct: 421 TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLE 480

Query: 481 RDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAA 540
           RDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIE+FTPTA+KLIDEQGPGALAAA
Sbjct: 481 RDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFTPTARKLIDEQGPGALAAA 540

Query: 541 LAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIG 600
           LAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADE+G
Sbjct: 541 LAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVG 600

Query: 601 KIHLIADERINGAVFDLPEEIAKELLNKELPEGNTLLKVTKLPPLQDDGPPSDNYGRFSG 660
           KIHLIADERINGAVFDLPEEIAKELLNKELPEGNT+LKVTKLPPLQDDGPPSDNYGRFSG
Sbjct: 601 KIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSG 660

Query: 661 RERNSRNSSRDRRGFRTSRGWGSSRDSDDDGDIFSRNRSFRTNSSKGRNFRSSGDDWLIG 720
           RERNSRNSSRDRRGFRTSRGWGSSRDSDDDGD+FSRNRSFRTNSS+GRNF+SSGDDWLIG
Sbjct: 661 RERNSRNSSRDRRGFRTSRGWGSSRDSDDDGDLFSRNRSFRTNSSRGRNFKSSGDDWLIG 720

Query: 721 GRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK 749
           GRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK
Sbjct: 721 GRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK 753

[Close]

BLAST of PI0006774 vs. NCBI nr
Match: XP_004135577.1 (DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Cucumis sativus] >KGN66001.1 hypothetical protein Csa_007094 [Cucumis sativus])

HSP 1 Score: 1399.8 bits (3622), Expect = 0.0e+00
Identity = 718/748 (95.99%), Postives = 739/748 (98.80%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDVYRRMGTTATASPTPSLSFVDKSHLLALKVQTCFGGSSRRNLS 60
           MASLLGVTAI HAPNLD+YRR GTTATASPTPSLSFVDKSHL+ALKVQTCF GSSRRNLS
Sbjct: 1   MASLLGVTAILHAPNLDLYRRTGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60

Query: 61  GFTSSAIATPNSILSEEAFRSLDGFSKNSLDDNLIDSEPNSSLAFSSDDDELAISKLNLP 120
           GFTSSAIATPNSILSEEAFRS DGFS++SLDDNLID EPNSSLAF++DDDELAISKLNLP
Sbjct: 61  GFTSSAIATPNSILSEEAFRSFDGFSEDSLDDNLIDPEPNSSLAFAADDDELAISKLNLP 120

Query: 121 QRLTDSLQKRGITNLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES 180
           QRLTD+LQKRGIT+LFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES
Sbjct: 121 QRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES 180

Query: 181 RSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV 240
           RS RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSY+TQQNALSRGVDV
Sbjct: 181 RSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYITQQNALSRGVDV 240

Query: 241 VVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA 300
           VVGTPGR+IDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA
Sbjct: 241 VVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA 300

Query: 301 TMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG 360
           TMPTWVKKLARKYL+NPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG
Sbjct: 301 TMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG 360

Query: 361 GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 420
           GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS
Sbjct: 361 GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 420

Query: 421 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC 480
           RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC
Sbjct: 421 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC 480

Query: 481 KFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS 540
           KFEFANPP +EEVL+SSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQG GALAAALAQLS
Sbjct: 481 KFEFANPPGMEEVLKSSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGLGALAAALAQLS 540

Query: 541 GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI 600
           GF+HPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSD+YSPAADEIGKIHLI
Sbjct: 541 GFTHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDVYSPAADEIGKIHLI 600

Query: 601 ADERINGAVFDLPEEIAKELLNKELPEGNTLLKVTKLPPLQDDGPPSDNYGRFSGRERNS 660
           ADERINGAVFDLPEEIAKELLNKELPEGNT+LK+TKLPPLQDDGPPSDNYGRFSGRER+S
Sbjct: 601 ADERINGAVFDLPEEIAKELLNKELPEGNTILKITKLPPLQDDGPPSDNYGRFSGRERSS 660

Query: 661 RNSSRDRRGFRTSRGWGSSRDSDDDGDIFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS 720
           RNSSRDRRG +TSRGWGSSRDSDD+GDIFSRNRSFRTN+SKGRNFRSSGDDWLIGGRRSS
Sbjct: 661 RNSSRDRRGLKTSRGWGSSRDSDDNGDIFSRNRSFRTNNSKGRNFRSSGDDWLIGGRRSS 720

Query: 721 RSSSVDRFGGSCFNCGRMGHRASECPDK 749
           RSSSVDRFGGSCFNCGRMGHRASECPDK
Sbjct: 721 RSSSVDRFGGSCFNCGRMGHRASECPDK 748

[Close]

BLAST of PI0006774 vs. NCBI nr
Match: KAA0050973.1 (DEAD-box ATP-dependent RNA helicase 3 [Cucumis melo var. makuwa] >TYK10319.1 DEAD-box ATP-dependent RNA helicase 3 [Cucumis melo var. makuwa])

HSP 1 Score: 1377.1 bits (3563), Expect = 0.0e+00
Identity = 712/727 (97.94%), Postives = 723/727 (99.45%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDVYRRMGTTATASPTPSLSFVDKSHLLALKVQTCFGGSSRRNLS 60
           MASLLGVTAIHHAPNLD+YRRMGTTATASPTPSLSFVDKSHL+ALKVQTCF GSSRRNLS
Sbjct: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60

Query: 61  GFTSSAIATPNSILSEEAFRSLDGFSKNSLDDNLIDSEPNSSLAFSSDDDELAISKLNLP 120
           GFTSSAIATPNSILSEEAFRSLDGFSK+ LDDNLID EPNSSLAFS+DDDELAISKLNLP
Sbjct: 61  GFTSSAIATPNSILSEEAFRSLDGFSKDPLDDNLIDPEPNSSLAFSADDDELAISKLNLP 120

Query: 121 QRLTDSLQKRGITNLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES 180
           QRLTD+LQKRGIT+LFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES
Sbjct: 121 QRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDES 180

Query: 181 RSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV 240
           RS RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV
Sbjct: 181 RSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDV 240

Query: 241 VVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA 300
           VVGTPGR+IDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA
Sbjct: 241 VVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSA 300

Query: 301 TMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG 360
           TMPTWVKKLARKYL+NPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG
Sbjct: 301 TMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKG 360

Query: 361 GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 420
           GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS
Sbjct: 361 GKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVAS 420

Query: 421 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC 480
           RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC
Sbjct: 421 RGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGC 480

Query: 481 KFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS 540
           KFEFANPPAIE+VLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS
Sbjct: 481 KFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLS 540

Query: 541 GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI 600
           GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI
Sbjct: 541 GFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLI 600

Query: 601 ADERINGAVFDLPEEIAKELLNKELPEGNTLLKVTKLPPLQDDGPPSDNYGRFSGRERNS 660
           ADERINGAVFDLPEEIAKELLNKELPEGNT+LKVTKLPPLQDDGPPSDNYGRFSGRERNS
Sbjct: 601 ADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKLPPLQDDGPPSDNYGRFSGRERNS 660

Query: 661 RNSSRDRRGFRTSRGWGSSRDSDDDGDIFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS 720
           RNSSRDRRGFRTSRGWGSSRDSDDDGD+FSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS
Sbjct: 661 RNSSRDRRGFRTSRGWGSSRDSDDDGDMFSRNRSFRTNSSKGRNFRSSGDDWLIGGRRSS 720

Query: 721 RSSSVDR 728
           RSSSVDR
Sbjct: 721 RSSSVDR 727

[Close]

BLAST of PI0006774 vs. NCBI nr
Match: XP_022157915.1 (DEAD-box ATP-dependent RNA helicase 3, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 1331.6 bits (3445), Expect = 0.0e+00
Identity = 693/765 (90.59%), Postives = 723/765 (94.51%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDVYRRMGTTATASPTPSLSFVDKSHLLALKVQTCFGGSSRRNL- 60
           MAS+LGVTAIHHAPNLD+YRRMGT AT SPTPSLSF DKSH+ A K QT F   SRRNL 
Sbjct: 1   MASILGVTAIHHAPNLDIYRRMGTAATPSPTPSLSFADKSHINASKAQTSFSSGSRRNLA 60

Query: 61  -----------SGFTSSAIATPNSILSEEAFRSLDGFSKNSLDDNLIDSEPNSSLAFS-- 120
                      SGF+SSAIATPNSILSEEAF+SLDGFSK    D+ IDS+PNSSL FS  
Sbjct: 61  FSDGSSAGTFKSGFSSSAIATPNSILSEEAFKSLDGFSK----DDFIDSQPNSSLGFSAD 120

Query: 121 --SDDDELAISKLNLPQRLTDSLQKRGITNLFPIQRAVLVPALEGRDLIARAKTGTGKTL 180
             +D+DELAISKL LPQRLT+SL+KRGIT+LFPIQRAVLVPALEGRDLIARAKTGTGKTL
Sbjct: 121 SPADEDELAISKLGLPQRLTESLEKRGITSLFPIQRAVLVPALEGRDLIARAKTGTGKTL 180

Query: 181 AFGIPILKKLTEDDESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGG 240
           AFGIPI+K+LTEDDE RSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGG
Sbjct: 181 AFGIPIIKRLTEDDELRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGG 240

Query: 241 VSYVTQQNALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEV 300
           VSYVTQQNAL+RGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEV
Sbjct: 241 VSYVTQQNALTRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEV 300

Query: 301 ILEKLPSQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTAT 360
           IL+KLP+QRQNMLFSATMPTWVKKLARKYLENPLTIDLVG QDEKLAEGIKL+AILTTAT
Sbjct: 301 ILQKLPTQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGXQDEKLAEGIKLYAILTTAT 360

Query: 361 SKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG 420
           SKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG
Sbjct: 361 SKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG 420

Query: 421 FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 480
           FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILMFT
Sbjct: 421 FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFT 480

Query: 481 NSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEYFTPTAQKLI 540
           NSQRRTVRSLERDVGCKFEFANPPAIE+VLESSAEQVV TLRGVHPESIE+FTPTAQKLI
Sbjct: 481 NSQRRTVRSLERDVGCKFEFANPPAIEDVLESSAEQVVATLRGVHPESIEFFTPTAQKLI 540

Query: 541 DEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS 600
           DEQG GALAAALAQLSGFSHPPSSRSLI+HEQGWVTLQLTRDPSYSRGFLSARSVTGFLS
Sbjct: 541 DEQGAGALAAALAQLSGFSHPPSSRSLISHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS 600

Query: 601 DIYSPAADEIGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTLLKVTKLPPLQDDG 660
           DIYSPAADE+GKIHLIADERI+GAVFDLPEEIAKELLNK LPEGNT+LKVTKLPPLQDDG
Sbjct: 601 DIYSPAADEVGKIHLIADERIHGAVFDLPEEIAKELLNKPLPEGNTILKVTKLPPLQDDG 660

Query: 661 PPSDNYGRFSGRERNSRNSSRDRRGFRTSRGWGSSRDSDDDGDIFSRNRSFRT-NSSKGR 720
           PPSDNYGRFSGRERNSRN+SRDRRGFRTSRGWGS RDSDDDGD+FSRNRSFRT NSS+ R
Sbjct: 661 PPSDNYGRFSGRERNSRNNSRDRRGFRTSRGWGSGRDSDDDGDLFSRNRSFRTNNSSRSR 720

Query: 721 NFRSSGDDWLIGGRRSSRSSSVDRFGGSCFNCGRMGHRASECPDK 749
           NF+SSGDDWLIGGRRSSRSSS+D FGGSCFNCGRMGHRASECPDK
Sbjct: 721 NFKSSGDDWLIGGRRSSRSSSMDGFGGSCFNCGRMGHRASECPDK 761

[Close]

BLAST of PI0006774 vs. TAIR 10
Match: AT5G26742.1 (DEAD box RNA helicase (RH3) )

HSP 1 Score: 968.4 bits (2502), Expect = 3.3e-282
Identity = 538/758 (70.98%), Postives = 619/758 (81.66%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDVYRRMGTTATASPTPSLSFVDKSHLLALKVQTCFGGSSRR--N 60
           MAS +GV +++  P+L++ +    +   S   SLS +DK     L +       +RR  +
Sbjct: 1   MASTVGVPSLYQVPHLEISK--PNSKKRSNCLSLS-LDKPFFTPLSLVR----RTRRIHS 60

Query: 61  LSGFTSSAIATPNSILSEEAFRSLDGFSKNSLDDNLIDSEPNSSLAFSSDDDELAISKLN 120
            S    SA+ATPNS+LSEEAF+SL G S +  D+  +D + N+  A   D +ELAISKL+
Sbjct: 61  SSLLVPSAVATPNSVLSEEAFKSL-GLSDH--DEYDLDGDNNNVEA--DDGEELAISKLS 120

Query: 121 LPQRLTDSLQKRGITNLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDD 180
           LPQRL +SL+KRGIT+LFPIQRAVLVPAL+GRD+IARAKTGTGKTLAFGIPI+K+LTE+ 
Sbjct: 121 LPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEA 180

Query: 181 ESRSSRRRS-RLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRG 240
              ++ RRS RLP+ LVL PTRELAKQVEKEIKESAPYL+TVCVYGGVSY  QQ+AL+RG
Sbjct: 181 GDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALTRG 240

Query: 241 VDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNML 300
           VDVVVGTPGRIIDLI G SL LGEVEYLVLDEADQMLAVGFEE VE ILE LP++RQ+ML
Sbjct: 241 VDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSML 300

Query: 301 FSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVY 360
           FSATMPTWVKKLARKYL+NPL IDLVGDQDEKLAEGIKL+AI TT+TSK+TIL DL+TVY
Sbjct: 301 FSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVY 360

Query: 361 AKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATD 420
           AKGGKTIVFTQTKRDADEVSLAL+NSI +EALHGDISQHQRERTLN FRQGKFTVLVATD
Sbjct: 361 AKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATD 420

Query: 421 VASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERD 480
           VASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILM T+SQ+RTVRSLERD
Sbjct: 421 VASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERD 480

Query: 481 VGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALA 540
           VGC FEF +PP + ++LESSA+QVV TL GVHP+SI++F+ TAQKL +E+G  ALAAALA
Sbjct: 481 VGCHFEFISPPTVGDLLESSADQVVATLNGVHPDSIKFFSATAQKLYEEKGTDALAAALA 540

Query: 541 QLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKI 600
            LSGFS PPSSRSL++HE+GWVTLQL RDP+ +RGFLSARSVTGFLSD+Y  AADE+GKI
Sbjct: 541 HLSGFSQPPSSRSLLSHEKGWVTLQLIRDPTNARGFLSARSVTGFLSDLYRTAADEVGKI 600

Query: 601 HLIADERINGAVFDLPEEIAKELLNKELPEGNTLLKVTKLPPLQDDGPPSDNYGRFSGRE 660
            LIAD+RI GAVFDLPEEIAKELL K++PEGN+L  +TKLPPLQDDGP SDNYGRFS R+
Sbjct: 601 FLIADDRIQGAVFDLPEEIAKELLEKDVPEGNSLSMITKLPPLQDDGPSSDNYGRFSSRD 660

Query: 661 RNSRNSSRDRRGFRTSRGWGSSRDSDD---DGDIFSRNRSFRTN--SSKGRNFRSSGDDW 720
           R  R      RG R  RG GSSR  D    D D  SR  S   +  S  G + R S DDW
Sbjct: 661 RMPRGGG-GSRGSRGGRG-GSSRGRDSWGGDDDRGSRRSSGGGSSWSRGGSSSRGSSDDW 720

Query: 721 LIGGR--RSSRSSSVDRFGGSCFNCGRMGHRASECPDK 749
           LIGGR   SSR+ S + FGGSCF CG+ GHRA++CPDK
Sbjct: 721 LIGGRSSSSSRAPSRESFGGSCFICGKSGHRATDCPDK 744

[Close]

BLAST of PI0006774 vs. TAIR 10
Match: AT5G26742.2 (DEAD box RNA helicase (RH3) )

HSP 1 Score: 967.6 bits (2500), Expect = 5.7e-282
Identity = 538/759 (70.88%), Postives = 618/759 (81.42%), Query Frame = 0


Query: 1   MASLLGVTAIHHAPNLDVYRRMGTTATASPTPSLSFVDKSHLLALKVQTCFGGSSRR--N 60
           MAS +GV +++  P+L++ +    +   S   SLS +DK     L +       +RR  +
Sbjct: 1   MASTVGVPSLYQVPHLEISK--PNSKKRSNCLSLS-LDKPFFTPLSLVR----RTRRIHS 60

Query: 61  LSGFTSSAIATPNSILSEEAFRSLDGFSKNSLDDNLIDSEPNSSLAFSSDDDELAISKLN 120
            S    SA+ATPNS+LSEEAF+SL G S +  D+  +D + N+  A   D +ELAISKL+
Sbjct: 61  SSLLVPSAVATPNSVLSEEAFKSL-GLSDH--DEYDLDGDNNNVEA--DDGEELAISKLS 120

Query: 121 LPQRLTDSLQKRGITNLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDD 180
           LPQRL +SL+KRGIT+LFPIQRAVLVPAL+GRD+IARAKTGTGKTLAFGIPI+K+LTE+ 
Sbjct: 121 LPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEA 180

Query: 181 ESRSSRRRS-RLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRG 240
              ++ RRS RLP+ LVL PTRELAKQVEKEIKESAPYL+TVCVYGGVSY  QQ+AL+RG
Sbjct: 181 GDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALTRG 240

Query: 241 VDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNML 300
           VDVVVGTPGRIIDLI G SL LGEVEYLVLDEADQMLAVGFEE VE ILE LP++RQ+ML
Sbjct: 241 VDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSML 300

Query: 301 FSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVY 360
           FSATMPTWVKKLARKYL+NPL IDLVGDQDEKLAEGIKL+AI TT+TSK+TIL DL+TVY
Sbjct: 301 FSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVY 360

Query: 361 AKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATD 420
           AKGGKTIVFTQTKRDADEVSLAL+NSI +EALHGDISQHQRERTLN FRQGKFTVLVATD
Sbjct: 361 AKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATD 420

Query: 421 VASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERD 480
           VASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILM T+SQ+RTVRSLERD
Sbjct: 421 VASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERD 480

Query: 481 VGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALA 540
           VGC FEF +PP + ++LESSA+QVV TL GVHP+SI++F+ TAQKL +E+G  ALAAALA
Sbjct: 481 VGCHFEFISPPTVGDLLESSADQVVATLNGVHPDSIKFFSATAQKLYEEKGTDALAAALA 540

Query: 541 QLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKI 600
            LSGFS PPSSRSL++HE+GWVTLQL RDP+ +RGFLSARSVTGFLSD+Y  AADE+GKI
Sbjct: 541 HLSGFSQPPSSRSLLSHEKGWVTLQLIRDPTNARGFLSARSVTGFLSDLYRTAADEVGKI 600

Query: 601 HLIADERINGAVFDLPEEIAKELLNKELPEGNTLLKVTKLPPLQDDGPPSDNYGRFSGRE 660
            LIAD+RI GAVFDLPEEIAKELL K++PEGN+L  +TKLPPLQDDGP SDNYGRFS R+
Sbjct: 601 FLIADDRIQGAVFDLPEEIAKELLEKDVPEGNSLSMITKLPPLQDDGPSSDNYGRFSSRD 660

Query: 661 RNSRNSSRDRRGFRTSRGWGSSRDSDD---DGDIFSRNRSFRTN--SSKGRNFRSSGDDW 720
           R  R      RG R  RG GSSR  D    D D  SR  S   +  S  G + R S DDW
Sbjct: 661 RMPRGGG-GSRGSRGGRG-GSSRGRDSWGGDDDRGSRRSSGGGSSWSRGGSSSRGSSDDW 720

Query: 721 LIGGRRSSRSSSVDR---FGGSCFNCGRMGHRASECPDK 749
           LIGGR SS S +  R   FGGSCF CG+ GHRA++CPDK
Sbjct: 721 LIGGRSSSSSRAPSRERSFGGSCFICGKSGHRATDCPDK 745

[Close]

BLAST of PI0006774 vs. TAIR 10
Match: AT5G26742.3 (DEAD box RNA helicase (RH3) )

HSP 1 Score: 892.9 bits (2306), Expect = 1.8e-259
Identity = 475/618 (76.86%), Postives = 529/618 (85.60%), Query Frame = 0


Query: 140 RAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDESRSSRRRS-RLPRVLVLTPT 199
           RAVLVPAL+GRD+IARAKTGTGKTLAFGIPI+K+LTE+    ++ RRS RLP+ LVL PT
Sbjct: 37  RAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPT 96

Query: 200 RELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPGRIIDLINGNSLN 259
           RELAKQVEKEIKESAPYL+TVCVYGGVSY  QQ+AL+RGVDVVVGTPGRIIDLI G SL 
Sbjct: 97  RELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLK 156

Query: 260 LGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSATMPTWVKKLARKYLENPL 319
           LGEVEYLVLDEADQMLAVGFEE VE ILE LP++RQ+MLFSATMPTWVKKLARKYL+NPL
Sbjct: 157 LGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPL 216

Query: 320 TIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSL 379
            IDLVGDQDEKLAEGIKL+AI TT+TSK+TIL DL+TVYAKGGKTIVFTQTKRDADEVSL
Sbjct: 217 NIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSL 276

Query: 380 ALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPN 439
           AL+NSI +EALHGDISQHQRERTLN FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPN
Sbjct: 277 ALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPN 336

Query: 440 DPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGCKFEFANPPAIEEVLESSA 499
           DPETFVHRSGRTGRAGKEG+AILM T+SQ+RTVRSLERDVGC FEF +PP + ++LESSA
Sbjct: 337 DPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLLESSA 396

Query: 500 EQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAALAQLSGFSHPPSSRSLINHEQGW 559
           +QVV TL GVHP+SI++F+ TAQKL +E+G  ALAAALA LSGFS PPSSRSL++HE+GW
Sbjct: 397 DQVVATLNGVHPDSIKFFSATAQKLYEEKGTDALAAALAHLSGFSQPPSSRSLLSHEKGW 456

Query: 560 VTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGKIHLIADERINGAVFDLPEEIAK 619
           VTLQL RDP+ +RGFLSARSVTGFLSD+Y  AADE+GKI LIAD+RI GAVFDLPEEIAK
Sbjct: 457 VTLQLIRDPTNARGFLSARSVTGFLSDLYRTAADEVGKIFLIADDRIQGAVFDLPEEIAK 516

Query: 620 ELLNKELPEGNTLLKVTKLPPLQDDGPPSDNYGRFSGRERNSRNSSRDRRGFRTSRGWGS 679
           ELL K++PEGN+L  +TKLPPLQDDGP SDNYGRFS R+R  R      RG R  RG GS
Sbjct: 517 ELLEKDVPEGNSLSMITKLPPLQDDGPSSDNYGRFSSRDRMPRGGG-GSRGSRGGRG-GS 576

Query: 680 SRDSDD---DGDIFSRNRSFRTN--SSKGRNFRSSGDDWLIGGRRSSRSSSVDR---FGG 739
           SR  D    D D  SR  S   +  S  G + R S DDWLIGGR SS S +  R   FGG
Sbjct: 577 SRGRDSWGGDDDRGSRRSSGGGSSWSRGGSSSRGSSDDWLIGGRSSSSSRAPSRERSFGG 636

Query: 740 SCFNCGRMGHRASECPDK 749
           SCF CG+ GHRA++CPDK
Sbjct: 637 SCFICGKSGHRATDCPDK 652

[Close]

BLAST of PI0006774 vs. TAIR 10
Match: AT3G22330.1 (putative mitochondrial RNA helicase 2 )

HSP 1 Score: 468.8 bits (1205), Expect = 8.3e-132
Identity = 237/392 (60.46%), Postives = 298/392 (76.02%), Query Frame = 0


Query: 110 DELAISKLNLPQRLTDSLQKRGITNLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIP 169
           D LAIS+L +   +  +L  +GI  LFPIQ+AVL PA+EGRD+I RA+TGTGKTLAFGIP
Sbjct: 102 DGLAISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIP 161

Query: 170 ILKKLTEDDESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVT 229
           I+ K+    +  +   R R P  LVL PTRELA+QVEKE +ESAP L+T+C+YGG     
Sbjct: 162 IIDKII---KYNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQ 221

Query: 230 QQNALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKL 289
           Q   L  GVDV VGTPGR+IDL+   +LNL EV+++VLDEADQML VGF EDVE+ILEKL
Sbjct: 222 QMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKL 281

Query: 290 PSQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTI 349
           P +RQ+M+FSATMP+W++ L +KYL NPLT+DLVGD D+KLA+GI  ++I+  +  + +I
Sbjct: 282 PEKRQSMMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASI 341

Query: 350 LRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGK 409
           +  LVT +AKGGK IVFTQTKRDAD +S ALA S   EALHGDISQ QRERTL GFR G 
Sbjct: 342 IGPLVTEHAKGGKCIVFTQTKRDADRLSYALARSFKCEALHGDISQSQRERTLAGFRDGH 401

Query: 410 FTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRR 469
           F +LVATDVA+RGLD+PNVDL+IHYELPN+ ETFVHR+GRTGRAGK+G+AIL+++  Q R
Sbjct: 402 FNILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSR 461

Query: 470 TVRSLERDVGCKFEFANPPAIEEVLESSAEQV 502
            V+ +ER+VG +F      A+E    S  E +
Sbjct: 462 AVKIIEREVGSRFTELPSIAVERGSASMFEGI 490

[Close]

BLAST of PI0006774 vs. TAIR 10
Match: AT3G22310.1 (putative mitochondrial RNA helicase 1 )

HSP 1 Score: 462.2 bits (1188), Expect = 7.8e-130
Identity = 243/431 (56.38%), Postives = 313/431 (72.62%), Query Frame = 0


Query: 71  NSILSEEAFRSLDGFSKNSLDDNLIDSEPNSSLAFSSDDDELAISKLNLPQRLTDSLQKR 130
           +SI+S   F + +       D  + DSE   S+  S   D LAI+ L +   +  +L+ R
Sbjct: 78  SSIVSSAGFAAQEYAPSYENDGGIGDSE---SVGSSGGGDGLAIADLGISPEIVKALKGR 137

Query: 131 GITNLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDESRSSRRRSRLP 190
           GI  LFPIQ+AVL PA+EGRD+I RA+TGTGKTLAFGIPI+ K+    +  +   R + P
Sbjct: 138 GIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKII---KFNAKHGRGKNP 197

Query: 191 RVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPGRIID 250
           + LVL PTRELA+QVEKE +ESAP L+T+C+YGG     Q   L+ G+DV VGTPGRIID
Sbjct: 198 QCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMRELNYGIDVAVGTPGRIID 257

Query: 251 LINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSATMPTWVKKLA 310
           L+   +LNL EV+++VLDEADQML VGF EDVE+IL+KLP++RQ+M+FSATMP+W++ L 
Sbjct: 258 LMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSMMFSATMPSWIRSLT 317

Query: 311 RKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKGGKTIVFTQTK 370
           +KYL NPLTIDLVGD D+KLA+GI +++I   +  + +I+  LV  + KGGK IVFTQTK
Sbjct: 318 KKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKEHGKGGKCIVFTQTK 377

Query: 371 RDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDL 430
           RDAD ++  LA S   EALHGDISQ QRERTL GFR G F++LVATDVA+RGLD+PNVDL
Sbjct: 378 RDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAARGLDVPNVDL 437

Query: 431 VIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGCKFEFANPPAI 490
           VIHYELPN+ ETFVHR+GRTGRAGK+G+AIL+    Q R V+ +E++VG +F      A+
Sbjct: 438 VIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVKMIEKEVGSRFNELPSIAV 497

Query: 491 EEVLESSAEQV 502
           E    S  E V
Sbjct: 498 ERGSASMFEGV 502

The following BLAST results are available for this feature:

BLAST of PI0006774 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L7S8	8.0e-281	70.88	DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Arabidopsis thaliana OX=...	[more]
Q0DM51	5.8e-271	67.24	DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Oryza sativa subsp. japo...	[more]
A0A1D6GDY8	6.6e-267	69.41	DEAD-box ATP-dependent RNA helicase 3A, chloroplastic OS=Zea mays OX=4577 GN=RH3...	[more]
A0A1D6LAB7	7.3e-266	69.33	DEAD-box ATP-dependent RNA helicase 3B, chloroplastic OS=Zea mays OX=4577 GN=RH3...	[more]
Q9LUW5	1.2e-130	60.46	DEAD-box ATP-dependent RNA helicase 53, mitochondrial OS=Arabidopsis thaliana OX...	[more]

BLAST of PI0006774 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BQ06	0.0e+00	97.99	RNA helicase OS=Cucumis melo OX=3656 GN=LOC103492086 PE=3 SV=1	[more]
A0A0A0M1E9	0.0e+00	95.99	RNA helicase OS=Cucumis sativus OX=3659 GN=Csa_1G560830 PE=3 SV=1	[more]
A0A5D3CJA2	0.0e+00	97.94	RNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004730 P...	[more]
A0A6J1DUC8	0.0e+00	90.59	RNA helicase OS=Momordica charantia OX=3673 GN=LOC111024523 PE=3 SV=1	[more]
A0A6J1I2F6	0.0e+00	91.53	RNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111468402 PE=3 SV=1	[more]

BLAST of PI0006774 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450498.1	0.0e+00	97.99	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Cucumis melo]	[more]
XP_038879136.1	0.0e+00	96.28	DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Benincasa hispida]	[more]
XP_004135577.1	0.0e+00	95.99	DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Cucumis sativus] >KGN66001...	[more]
KAA0050973.1	0.0e+00	97.94	DEAD-box ATP-dependent RNA helicase 3 [Cucumis melo var. makuwa] >TYK10319.1 DEA...	[more]
XP_022157915.1	0.0e+00	90.59	DEAD-box ATP-dependent RNA helicase 3, chloroplastic isoform X1 [Momordica chara...	[more]

BLAST of PI0006774 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26742.1	3.3e-282	70.98	DEAD box RNA helicase (RH3)	[more]
AT5G26742.2	5.7e-282	70.88	DEAD box RNA helicase (RH3)	[more]
AT5G26742.3	1.8e-259	76.86	DEAD box RNA helicase (RH3)	[more]
AT3G22330.1	8.3e-132	60.46	putative mitochondrial RNA helicase 2	[more]
AT3G22310.1	7.8e-130	56.38	putative mitochondrial RNA helicase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 731..747 e-value: 2.4E-4 score: 30.4
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 731..746 e-value: 3.0E-6 score: 27.1
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 732..747 score: 10.674652
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 374..454 e-value: 6.5E-32 score: 122.0
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 348..454 e-value: 1.8E-31 score: 108.7
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 349..509 score: 23.455368
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 131..337 e-value: 7.9E-60 score: 214.8
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 143..320 score: 31.99313
IPR012562	GUCT	PFAM	PF08152	GUCT	coord: 541..641 e-value: 1.6E-17 score: 63.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 113..324 e-value: 1.8E-75 score: 254.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 334..526 e-value: 1.0E-51 score: 177.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 190..475
None	No IPR available	GENE3D	4.10.60.10		coord: 717..748 e-value: 5.9E-6 score: 27.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 634..725
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 654..691
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 692..706
None	No IPR available	PANTHER	PTHR47959:SF12	SUBFAMILY NOT NAMED	coord: 26..743
None	No IPR available	PANTHER	PTHR47959	ATP-DEPENDENT RNA HELICASE RHLE-RELATED	coord: 26..743
None	No IPR available	CDD	cd12938	GUCT_Hera	coord: 548..628 e-value: 4.83016E-21 score: 85.4275
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 334..463 e-value: 1.04211E-53 score: 179.625
None	No IPR available	CDD	cd00268	DEADc	coord: 123..321 e-value: 5.44976E-95 score: 291.653
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 136..309 e-value: 1.6E-47 score: 161.5
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 717..747

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0006774.1	PI0006774.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000373	Group II intron splicing
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding