PI0006721 (gene) Melon (PI 482460) v1

Overview


Name	PI0006721
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	RING-H2 finger protein ATL80
Location	chr06: 30792547 .. 30793673 (+)
RNA-Seq Expression	PI0006721
Synteny	PI0006721

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAAAAACCAAAGTATGGAGTGGCCCCACCTCAGAAGTTGTCCTCTTCTCCTCTTTCCCTTCTAACAACAAAATCACTCTACAGTTTCTTCTTTTCCCTCACAGAAAGATAGAAAGAAACCCTCAATACAATATTACTTACACTCACTGCTCAATCCCCAATCCCTTCTCTTCTCAACCTTCTGTCTCATGTCTCCCTATATCAGAGCTCTCACCGCGAATACTTCGTCGGCGCCTCCGCCGGAAGCGGTGGCCTTGGAGTCGGACTTCGTGGTCATTCTGGCGGCTTTGCTCTGTGCCCTAATTTGTATGGTAGGGCTGATAGCGGTGGCTCGGTGCGCCTGGCTCCGCCGTGGAAATCAGGCGTCGGCGAATAGAGGACTGAAGAAGAAGATACTGCAGTCGCTCCCGAAATTCAGGTACAAGTCGACGGTGGGAGATGGGAAAATAGCGGCGGAATGTGCGATCTGCCTGGCGGAGTTCTTGGAGGGGGAGGAGATCCGGCAGTTGCCGCAGTGCGGGCATTGCTTCCACGTCAGCTGCGTAGACACGTGGCTAGGTACCCACTCCTCCTGCCCTTCTTGCCGTCAGATTCTGGTAGTGGCCAGATGTCAGAAGTGCGGCCAGTTTCCGGCGGTTGTACAAGGCGGCGCTGCTCACAACAACGAGGAGGAGGAAGTGGAAGATGATAACAACAACAGGGGTTTGGGATTCTTGCCTTGACTTAACAAACCTTGGCTTCACTTCACCCTCTCTATTTCTTTCTGTTTCATCACAAACACACAAGATTCAGTTCTCTGTGAATTCTTTTTTTCTTGTTTTTTTTATAAAAAAAAATACAAAAACAAATCTTGACTCAAAATGTAAAAAAAAAAAAAATCCCTTCATTAGAAAAACTGCACTTGTAAATTCTAAATTCTAAATTCTAAATTGTAGCTTCATTACCATTTCACTGCCTTTCATGCTGTTTCTGATGAAGATCCCTTCCTCTATCAAAGTTCCTTTTTATTTTCTTCCTCTCTCTCTTTTGTACGCATTCTACCATTTGTTTTAGTTAATTCTTTAAAAAAAATTATCTAATGATTGATTGATTTAAAACAAATAATGTTTGTCACGTACT

mRNA sequence

AAAAAAAAAAAAAAACCAAAGTATGGAGTGGCCCCACCTCAGAAGTTGTCCTCTTCTCCTCTTTCCCTTCTAACAACAAAATCACTCTACAGTTTCTTCTTTTCCCTCACAGAAAGATAGAAAGAAACCCTCAATACAATATTACTTACACTCACTGCTCAATCCCCAATCCCTTCTCTTCTCAACCTTCTGTCTCATGTCTCCCTATATCAGAGCTCTCACCGCGAATACTTCGTCGGCGCCTCCGCCGGAAGCGGTGGCCTTGGAGTCGGACTTCGTGGTCATTCTGGCGGCTTTGCTCTGTGCCCTAATTTGTATGGTAGGGCTGATAGCGGTGGCTCGGTGCGCCTGGCTCCGCCGTGGAAATCAGGCGTCGGCGAATAGAGGACTGAAGAAGAAGATACTGCAGTCGCTCCCGAAATTCAGGTACAAGTCGACGGTGGGAGATGGGAAAATAGCGGCGGAATGTGCGATCTGCCTGGCGGAGTTCTTGGAGGGGGAGGAGATCCGGCAGTTGCCGCAGTGCGGGCATTGCTTCCACGTCAGCTGCGTAGACACGTGGCTAGGTACCCACTCCTCCTGCCCTTCTTGCCGTCAGATTCTGGTAGTGGCCAGATGTCAGAAGTGCGGCCAGTTTCCGGCGGTTGTACAAGGCGGCGCTGCTCACAACAACGAGGAGGAGGAAGTGGAAGATGATAACAACAACAGGGGTTTGGGATTCTTGCCTTGACTTAACAAACCTTGGCTTCACTTCACCCTCTCTATTTCTTTCTGTTTCATCACAAACACACAAGATTCAGTTCTCTGTGAATTCTTTTTTTCTTGTTTTTTTTATAAAAAAAAATACAAAAACAAATCTTGACTCAAAATGTAAAAAAAAAAAAAATCCCTTCATTAGAAAAACTGCACTTGTAAATTCTAAATTCTAAATTCTAAATTGTAGCTTCATTACCATTTCACTGCCTTTCATGCTGTTTCTGATGAAGATCCCTTCCTCTATCAAAGTTCCTTTTTATTTTCTTCCTCTCTCTCTTTTGTACGCATTCTACCATTTGTTTTAGTTAATTCTTTAAAAAAAATTATCTAATGATTGATTGATTTAAAACAAATAATGTTTGTCACGTACT

Coding sequence (CDS)

ATGTCTCCCTATATCAGAGCTCTCACCGCGAATACTTCGTCGGCGCCTCCGCCGGAAGCGGTGGCCTTGGAGTCGGACTTCGTGGTCATTCTGGCGGCTTTGCTCTGTGCCCTAATTTGTATGGTAGGGCTGATAGCGGTGGCTCGGTGCGCCTGGCTCCGCCGTGGAAATCAGGCGTCGGCGAATAGAGGACTGAAGAAGAAGATACTGCAGTCGCTCCCGAAATTCAGGTACAAGTCGACGGTGGGAGATGGGAAAATAGCGGCGGAATGTGCGATCTGCCTGGCGGAGTTCTTGGAGGGGGAGGAGATCCGGCAGTTGCCGCAGTGCGGGCATTGCTTCCACGTCAGCTGCGTAGACACGTGGCTAGGTACCCACTCCTCCTGCCCTTCTTGCCGTCAGATTCTGGTAGTGGCCAGATGTCAGAAGTGCGGCCAGTTTCCGGCGGTTGTACAAGGCGGCGCTGCTCACAACAACGAGGAGGAGGAAGTGGAAGATGATAACAACAACAGGGGTTTGGGATTCTTGCCTTGA

Protein sequence

MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEVEDDNNNRGLGFLP

Homology

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BLAST of PI0006721 vs. ExPASy Swiss-Prot
Match: Q9LM69 (RING-H2 finger protein ATL80 OS=Arabidopsis thaliana OX=3702 GN=ATL80 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 6.1e-46
Identity = 105/190 (55.26%), Postives = 123/190 (64.74%), Query Frame = 0


Query: 13  SSAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRR---GNQ------- 72
           S+ P P       AL SD VVILAALLCALIC++GLIAV+RC WLRR   GN+       
Sbjct: 12  SNTPSPAIDNSTAALNSDLVVILAALLCALICVLGLIAVSRCVWLRRLAAGNRTVSGSQT 71

Query: 73  -------ASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCG 132
                  A+AN+GLKKK+LQSLPK  +     + +  AECAICLAEF  G+E+R LPQCG
Sbjct: 72  QSPQPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCG 131

Query: 133 HCFHVSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEE----EVEDD 178
           H FHV+C+DTWLG+HSSCPSCRQILVVARC KCG  P     G     E E    + EDD
Sbjct: 132 HGFHVACIDTWLGSHSSCPSCRQILVVARCHKCGGLPGSSSSGLESEPEIEIRIKQGEDD 191

[Close]

BLAST of PI0006721 vs. ExPASy Swiss-Prot
Match: Q8LC69 (RING-H2 finger protein ATL8 OS=Arabidopsis thaliana OX=3702 GN=ATL8 PE=2 SV=2)

HSP 1 Score: 177.2 bits (448), Expect = 1.7e-43
Identity = 93/177 (52.54%), Postives = 114/177 (64.41%), Query Frame = 0


Query: 6   RALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLR------RGNQ- 65
           R L    S++P   +    SD V+ILA LLCAL C++GLIAV+RCAWLR      R +Q 
Sbjct: 7   RLLQEANSTSPAEASPPFNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRSDQT 66

Query: 66  -----ASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHC 125
                A+AN+GLKKK+L+SLPK  Y       +   ECAICL EF  G+E+R LPQCGH 
Sbjct: 67  HPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHG 126

Query: 126 FHVSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEVEDDNNN 171
           FHVSC+DTWLG+HSSCPSCRQILVV RC KCG  P     G   +   ++ ED  +N
Sbjct: 127 FHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLPGSSSSGPEPDTRIKQREDGPDN 183

[Close]

BLAST of PI0006721 vs. ExPASy Swiss-Prot
Match: Q9ZT49 (Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=ATL45 PE=1 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.7e-40
Identity = 87/165 (52.73%), Postives = 106/165 (64.24%), Query Frame = 0


Query: 12  TSSAPPPEAV-ALESDFVVILAALLCALICMVGLIAVARCAWLRR---------GNQASA 71
           T+S PPPE + A E+D VVIL+ALLCAL+C+ GL AVARCAWLRR         G     
Sbjct: 10  TASPPPPEEILAAETDMVVILSALLCALVCVAGLAAVARCAWLRRLTGVNPAAVGEAPPP 69

Query: 72  NRGLKKKILQSLPKFRYK--------------STVGDGKIAAECAICLAEFLEGEEIRQL 131
           N+GLKKK LQ+LPK  Y               S+VGDG  + ECAIC+ EF EGEEIR L
Sbjct: 70  NKGLKKKALQALPKSTYTASASTAAAADDLPCSSVGDGDSSTECAICITEFSEGEEIRIL 129

Query: 132 PQCGHCFHVSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVQ 153
           P C H FHV+C+D WL + SSCPSCR+ILV  +C +CG   +  +
Sbjct: 130 PLCSHAFHVACIDKWLTSRSSCPSCRRILVPVKCDRCGHHASTAE 174

[Close]

BLAST of PI0006721 vs. ExPASy Swiss-Prot
Match: O22755 (Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=ATL44 PE=1 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.5e-39
Identity = 86/165 (52.12%), Postives = 105/165 (63.64%), Query Frame = 0


Query: 13  SSAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRR----GNQASANRG 72
           ++APPP    E +A ESD VVIL+ALLCALIC+ GL AV RCAWLRR    G+  S N+G
Sbjct: 10  TAAPPPQPSEEMIAAESDMVVILSALLCALICVAGLAAVVRCAWLRRFTAGGDSPSPNKG 69

Query: 73  LKKKILQSLPKFRYKSTVGDGKIAA------ECAICLAEFLEGEEIRQLPQCGHCFHVSC 132
           LKKK LQSLP+  + +       AA      ECAICL +F +GEEIR LP CGH FHV C
Sbjct: 70  LKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVEC 129

Query: 133 VDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEE 164
           +D WL + SSCPSCR+IL   RC +CG          AH ++  +
Sbjct: 130 IDKWLVSRSSCPSCRRILTPVRCDRCGHASTAEMKDQAHRHQHHQ 174

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BLAST of PI0006721 vs. ExPASy Swiss-Prot
Match: Q9LZV8 (RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.0e-24
Identity = 63/124 (50.81%), Postives = 83/124 (66.94%), Query Frame = 0


Query: 24  ESDFVVILAALLCALICMVGLIAVARCAWLRRGNQASAN---------RGLKKKILQSLP 83
           +++ V+ILAALLCALI  +GL ++ RCA +R G   S++          GLKK+ L+  P
Sbjct: 31  DANMVIILAALLCALILALGLNSILRCA-MRCGFGLSSSAAAGTVADRAGLKKRELKKFP 90

Query: 84  KFRYKSTVGDGKIAA-ECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGTHSSCPSCR 138
              Y S  G+ KIAA ECAICL EF +GE +R LP C H FH+SC+DTWL +HSSCP+CR
Sbjct: 91  VAEYGS--GEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCR 150

[Close]

BLAST of PI0006721 vs. ExPASy TrEMBL
Match: A0A5D3CJ22 (RING-H2 finger protein ATL80 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00120 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.1e-93
Identity = 175/178 (98.31%), Postives = 176/178 (98.88%), Query Frame = 0


Query: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS 60
           MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS
Sbjct: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS 60

Query: 61  ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD 120
           ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD
Sbjct: 61  ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD 120

Query: 121 TWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEVEDDNN-NRGLGFLP 178
           TWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAA NNEEEEVED+NN NRGLGFLP
Sbjct: 121 TWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAADNNEEEEVEDNNNDNRGLGFLP 178

[Close]

BLAST of PI0006721 vs. ExPASy TrEMBL
Match: A0A1S3BKT0 (RING-H2 finger protein ATL80 OS=Cucumis melo OX=3656 GN=LOC103491102 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.1e-93
Identity = 175/178 (98.31%), Postives = 176/178 (98.88%), Query Frame = 0


Query: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS 60
           MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS
Sbjct: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS 60

Query: 61  ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD 120
           ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD
Sbjct: 61  ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD 120

Query: 121 TWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEVEDDNN-NRGLGFLP 178
           TWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAA NNEEEEVED+NN NRGLGFLP
Sbjct: 121 TWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAADNNEEEEVEDNNNDNRGLGFLP 178

[Close]

BLAST of PI0006721 vs. ExPASy TrEMBL
Match: A0A0A0L622 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G000150 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.5e-92
Identity = 174/181 (96.13%), Postives = 175/181 (96.69%), Query Frame = 0


Query: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS 60
           MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS
Sbjct: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS 60

Query: 61  ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD 120
           ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD
Sbjct: 61  ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD 120

Query: 121 TWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEVED----DNNNRGLGFL 178
           TWLGTHSSCPSCRQILVVARCQKCGQFPA VQGG AHNNEEEEVED    +NNNRGLGFL
Sbjct: 121 TWLGTHSSCPSCRQILVVARCQKCGQFPADVQGGGAHNNEEEEVEDNINNNNNNRGLGFL 180

[Close]

BLAST of PI0006721 vs. ExPASy TrEMBL
Match: A0A6J1I6T7 (RING-H2 finger protein ATL8 OS=Cucurbita maxima OX=3661 GN=LOC111470152 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 4.7e-73
Identity = 152/195 (77.95%), Postives = 164/195 (84.10%), Query Frame = 0


Query: 1   MSPYIRALTANTSS------APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLR 60
           M+ Y++AL  NTSS      APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLR
Sbjct: 41  MTRYLQALAGNTSSATATATAPPPEAVAIESDFVVILAALLCALICMVGLIAVARCAWLR 100

Query: 61  R-------GNQASANRGLKKKILQSLPKFRYKS--TVGDGKIAAECAICLAEFLEGEEIR 120
           R       GNQASANRGLKKKILQSLPKF Y++  + G+GK AAECAICLAEFL+GEEIR
Sbjct: 101 RGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEGKFAAECAICLAEFLDGEEIR 160

Query: 121 QLPQCGHCFHVSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEV- 178
           QLPQCGHCFHVSCVDTWL +HSSCPSCRQILVVARCQKCG FPAVV G   HNNEEE+  
Sbjct: 161 QLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGDFPAVVHGD-DHNNEEEQKR 220

[Close]

BLAST of PI0006721 vs. ExPASy TrEMBL
Match: A0A6J1F5B4 (RING-H2 finger protein ATL8 OS=Cucurbita moschata OX=3662 GN=LOC111440980 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 2.3e-72
Identity = 151/195 (77.44%), Postives = 164/195 (84.10%), Query Frame = 0


Query: 1   MSPYIRALTANTSS------APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLR 60
           M+ Y +AL  NTSS      APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLR
Sbjct: 1   MTRYFQALAGNTSSATATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLR 60

Query: 61  R-------GNQASANRGLKKKILQSLPKFRYKS--TVGDGKIAAECAICLAEFLEGEEIR 120
           R       GNQASANRGLKKKILQSLPKF Y++  + G+ K AAECAICLAEFL+GEEIR
Sbjct: 61  RGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEEKFAAECAICLAEFLDGEEIR 120

Query: 121 QLPQCGHCFHVSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEV- 178
           QLPQCGHCFHVSCVDTWL +HSSCPSCRQILVVARCQKCG+FPAVV GG  HN+EEE+  
Sbjct: 121 QLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGG-DHNDEEEQKR 180

[Close]

BLAST of PI0006721 vs. NCBI nr
Match: XP_008449155.1 (PREDICTED: RING-H2 finger protein ATL80 [Cucumis melo] >KAA0052906.1 RING-H2 finger protein ATL80 [Cucumis melo var. makuwa] >TYK11360.1 RING-H2 finger protein ATL80 [Cucumis melo var. makuwa])

HSP 1 Score: 350.5 bits (898), Expect = 8.4e-93
Identity = 175/178 (98.31%), Postives = 176/178 (98.88%), Query Frame = 0


Query: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS 60
           MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS
Sbjct: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS 60

Query: 61  ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD 120
           ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD
Sbjct: 61  ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD 120

Query: 121 TWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEVEDDNN-NRGLGFLP 178
           TWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAA NNEEEEVED+NN NRGLGFLP
Sbjct: 121 TWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAADNNEEEEVEDNNNDNRGLGFLP 178

[Close]

BLAST of PI0006721 vs. NCBI nr
Match: XP_004146217.1 (RING-H2 finger protein ATL80 [Cucumis sativus] >XP_031738026.1 RING-H2 finger protein ATL80 [Cucumis sativus] >XP_031745531.1 RING-H2 finger protein ATL80-like [Cucumis sativus])

HSP 1 Score: 348.6 bits (893), Expect = 3.2e-92
Identity = 174/181 (96.13%), Postives = 175/181 (96.69%), Query Frame = 0


Query: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS 60
           MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS
Sbjct: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS 60

Query: 61  ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD 120
           ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD
Sbjct: 61  ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD 120

Query: 121 TWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEVED----DNNNRGLGFL 178
           TWLGTHSSCPSCRQILVVARCQKCGQFPA VQGG AHNNEEEEVED    +NNNRGLGFL
Sbjct: 121 TWLGTHSSCPSCRQILVVARCQKCGQFPADVQGGGAHNNEEEEVEDNINNNNNNRGLGFL 180

[Close]

BLAST of PI0006721 vs. NCBI nr
Match: KAE8637404.1 (hypothetical protein CSA_023381 [Cucumis sativus])

HSP 1 Score: 339.3 bits (869), Expect = 1.9e-89
Identity = 170/181 (93.92%), Postives = 173/181 (95.58%), Query Frame = 0


Query: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS 60
           MS + +ALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS
Sbjct: 485 MSNFRQALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS 544

Query: 61  ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD 120
           ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD
Sbjct: 545 ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD 604

Query: 121 TWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEVED----DNNNRGLGFL 178
           TWLGTHSSCPSCRQILVVARCQKCGQFPA VQGG AHNNEEEEVED    +NNNRGLGFL
Sbjct: 605 TWLGTHSSCPSCRQILVVARCQKCGQFPADVQGGGAHNNEEEEVEDNINNNNNNRGLGFL 664

[Close]

BLAST of PI0006721 vs. NCBI nr
Match: XP_038904164.1 (RING-H2 finger protein ATL80-like [Benincasa hispida])

HSP 1 Score: 318.2 bits (814), Expect = 4.6e-83
Identity = 161/182 (88.46%), Postives = 167/182 (91.76%), Query Frame = 0


Query: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR----- 60
           M+ YIRAL  NTS APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRR     
Sbjct: 1   MTRYIRALAGNTSLAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSA 60

Query: 61  GNQASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFH 120
           GNQASANRGLKKKILQSLPKF+YKST G+GKIAAECAICLAEFLEGEEIRQLPQCGHCFH
Sbjct: 61  GNQASANRGLKKKILQSLPKFKYKSTGGEGKIAAECAICLAEFLEGEEIRQLPQCGHCFH 120

Query: 121 VSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEVEDDNNNRGLGF 178
           VSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEE E    +NNRGLGF
Sbjct: 121 VSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEVE----DNNRGLGF 178

[Close]

BLAST of PI0006721 vs. NCBI nr
Match: XP_023539225.1 (RING-H2 finger protein ATL8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 286.6 bits (732), Expect = 1.5e-73
Identity = 153/195 (78.46%), Postives = 165/195 (84.62%), Query Frame = 0


Query: 1   MSPYIRALTANTSS------APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLR 60
           M+ Y +AL  NTSS      APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLR
Sbjct: 41  MTRYFQALAGNTSSATATATAPPPEAVAIESDFVVILAALLCALICMVGLIAVARCAWLR 100

Query: 61  R-------GNQASANRGLKKKILQSLPKFRYKS--TVGDGKIAAECAICLAEFLEGEEIR 120
           R       GNQASANRGLKKKILQSLPKF Y++  + G+GK AAECAICLAEFL+GEEIR
Sbjct: 101 RGSNSGGAGNQASANRGLKKKILQSLPKFTYRASGSGGEGKFAAECAICLAEFLDGEEIR 160

Query: 121 QLPQCGHCFHVSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEV- 178
           QLPQCGHCFHVSCVDTWL +HSSCPSCRQILVVARCQKCG+FPAVV GG  HNNEEE+  
Sbjct: 161 QLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGG-DHNNEEEQKR 220

[Close]

BLAST of PI0006721 vs. TAIR 10
Match: AT1G20823.1 (RING/U-box superfamily protein )

HSP 1 Score: 185.3 bits (469), Expect = 4.3e-47
Identity = 105/190 (55.26%), Postives = 123/190 (64.74%), Query Frame = 0


Query: 13  SSAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRR---GNQ------- 72
           S+ P P       AL SD VVILAALLCALIC++GLIAV+RC WLRR   GN+       
Sbjct: 12  SNTPSPAIDNSTAALNSDLVVILAALLCALICVLGLIAVSRCVWLRRLAAGNRTVSGSQT 71

Query: 73  -------ASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCG 132
                  A+AN+GLKKK+LQSLPK  +     + +  AECAICLAEF  G+E+R LPQCG
Sbjct: 72  QSPQPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCG 131

Query: 133 HCFHVSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEE----EVEDD 178
           H FHV+C+DTWLG+HSSCPSCRQILVVARC KCG  P     G     E E    + EDD
Sbjct: 132 HGFHVACIDTWLGSHSSCPSCRQILVVARCHKCGGLPGSSSSGLESEPEIEIRIKQGEDD 191

[Close]

BLAST of PI0006721 vs. TAIR 10
Match: AT1G76410.1 (RING/U-box superfamily protein )

HSP 1 Score: 177.2 bits (448), Expect = 1.2e-44
Identity = 93/177 (52.54%), Postives = 114/177 (64.41%), Query Frame = 0


Query: 6   RALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLR------RGNQ- 65
           R L    S++P   +    SD V+ILA LLCAL C++GLIAV+RCAWLR      R +Q 
Sbjct: 7   RLLQEANSTSPAEASPPFNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRSDQT 66

Query: 66  -----ASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHC 125
                A+AN+GLKKK+L+SLPK  Y       +   ECAICL EF  G+E+R LPQCGH 
Sbjct: 67  HPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHG 126

Query: 126 FHVSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEEVEDDNNN 171
           FHVSC+DTWLG+HSSCPSCRQILVV RC KCG  P     G   +   ++ ED  +N
Sbjct: 127 FHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLPGSSSSGPEPDTRIKQREDGPDN 183

[Close]

BLAST of PI0006721 vs. TAIR 10
Match: AT4G35480.1 (RING-H2 finger A3B )

HSP 1 Score: 167.2 bits (422), Expect = 1.2e-41
Identity = 87/165 (52.73%), Postives = 106/165 (64.24%), Query Frame = 0


Query: 12  TSSAPPPEAV-ALESDFVVILAALLCALICMVGLIAVARCAWLRR---------GNQASA 71
           T+S PPPE + A E+D VVIL+ALLCAL+C+ GL AVARCAWLRR         G     
Sbjct: 10  TASPPPPEEILAAETDMVVILSALLCALVCVAGLAAVARCAWLRRLTGVNPAAVGEAPPP 69

Query: 72  NRGLKKKILQSLPKFRYK--------------STVGDGKIAAECAICLAEFLEGEEIRQL 131
           N+GLKKK LQ+LPK  Y               S+VGDG  + ECAIC+ EF EGEEIR L
Sbjct: 70  NKGLKKKALQALPKSTYTASASTAAAADDLPCSSVGDGDSSTECAICITEFSEGEEIRIL 129

Query: 132 PQCGHCFHVSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVQ 153
           P C H FHV+C+D WL + SSCPSCR+ILV  +C +CG   +  +
Sbjct: 130 PLCSHAFHVACIDKWLTSRSSCPSCRRILVPVKCDRCGHHASTAE 174

[Close]

BLAST of PI0006721 vs. TAIR 10
Match: AT2G17450.1 (RING-H2 finger A3A )

HSP 1 Score: 164.1 bits (414), Expect = 1.0e-40
Identity = 86/165 (52.12%), Postives = 105/165 (63.64%), Query Frame = 0


Query: 13  SSAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRR----GNQASANRG 72
           ++APPP    E +A ESD VVIL+ALLCALIC+ GL AV RCAWLRR    G+  S N+G
Sbjct: 10  TAAPPPQPSEEMIAAESDMVVILSALLCALICVAGLAAVVRCAWLRRFTAGGDSPSPNKG 69

Query: 73  LKKKILQSLPKFRYKSTVGDGKIAA------ECAICLAEFLEGEEIRQLPQCGHCFHVSC 132
           LKKK LQSLP+  + +       AA      ECAICL +F +GEEIR LP CGH FHV C
Sbjct: 70  LKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVEC 129

Query: 133 VDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNNEEEE 164
           +D WL + SSCPSCR+IL   RC +CG          AH ++  +
Sbjct: 130 IDKWLVSRSSCPSCRRILTPVRCDRCGHASTAEMKDQAHRHQHHQ 174

[Close]

BLAST of PI0006721 vs. TAIR 10
Match: AT5G01880.1 (RING/U-box superfamily protein )

HSP 1 Score: 113.2 bits (282), Expect = 2.1e-25
Identity = 63/124 (50.81%), Postives = 83/124 (66.94%), Query Frame = 0


Query: 24  ESDFVVILAALLCALICMVGLIAVARCAWLRRGNQASAN---------RGLKKKILQSLP 83
           +++ V+ILAALLCALI  +GL ++ RCA +R G   S++          GLKK+ L+  P
Sbjct: 31  DANMVIILAALLCALILALGLNSILRCA-MRCGFGLSSSAAAGTVADRAGLKKRELKKFP 90

Query: 84  KFRYKSTVGDGKIAA-ECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGTHSSCPSCR 138
              Y S  G+ KIAA ECAICL EF +GE +R LP C H FH+SC+DTWL +HSSCP+CR
Sbjct: 91  VAEYGS--GEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCR 150

The following BLAST results are available for this feature:

BLAST of PI0006721 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LM69	6.1e-46	55.26	RING-H2 finger protein ATL80 OS=Arabidopsis thaliana OX=3702 GN=ATL80 PE=2 SV=1	[more]
Q8LC69	1.7e-43	52.54	RING-H2 finger protein ATL8 OS=Arabidopsis thaliana OX=3702 GN=ATL8 PE=2 SV=2	[more]
Q9ZT49	1.7e-40	52.73	Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=AT...	[more]
O22755	1.5e-39	52.12	Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=AT...	[more]
Q9LZV8	3.0e-24	50.81	RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1	[more]

BLAST of PI0006721 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CJ22	4.1e-93	98.31	RING-H2 finger protein ATL80 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3BKT0	4.1e-93	98.31	RING-H2 finger protein ATL80 OS=Cucumis melo OX=3656 GN=LOC103491102 PE=4 SV=1	[more]
A0A0A0L622	1.5e-92	96.13	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G000150 P...	[more]
A0A6J1I6T7	4.7e-73	77.95	RING-H2 finger protein ATL8 OS=Cucurbita maxima OX=3661 GN=LOC111470152 PE=4 SV=...	[more]
A0A6J1F5B4	2.3e-72	77.44	RING-H2 finger protein ATL8 OS=Cucurbita moschata OX=3662 GN=LOC111440980 PE=4 S...	[more]

BLAST of PI0006721 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449155.1	8.4e-93	98.31	PREDICTED: RING-H2 finger protein ATL80 [Cucumis melo] >KAA0052906.1 RING-H2 fin...	[more]
XP_004146217.1	3.2e-92	96.13	RING-H2 finger protein ATL80 [Cucumis sativus] >XP_031738026.1 RING-H2 finger pr...	[more]
KAE8637404.1	1.9e-89	93.92	hypothetical protein CSA_023381 [Cucumis sativus]	[more]
XP_038904164.1	4.6e-83	88.46	RING-H2 finger protein ATL80-like [Benincasa hispida]	[more]
XP_023539225.1	1.5e-73	78.46	RING-H2 finger protein ATL8 [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0006721 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G20823.1	4.3e-47	55.26	RING/U-box superfamily protein	[more]
AT1G76410.1	1.2e-44	52.54	RING/U-box superfamily protein	[more]
AT4G35480.1	1.2e-41	52.73	RING-H2 finger A3B	[more]
AT2G17450.1	1.0e-40	52.12	RING-H2 finger A3A	[more]
AT5G01880.1	2.1e-25	50.81	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 91..132 e-value: 1.8E-5 score: 34.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 90..133 e-value: 2.5E-14 score: 53.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 91..133 score: 12.267982
None	No IPR available	SMART	SM01197	FANCL_C_2	coord: 87..141 e-value: 0.0017 score: 4.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..177
None	No IPR available	PANTHER	PTHR45798:SF61	E3 UBIQUITIN-PROTEIN LIGASE ATL44-RELATED	coord: 2..163
None	No IPR available	PANTHER	PTHR45798	RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED	coord: 2..163
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 69..139
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 51..137 e-value: 3.0E-24 score: 86.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0006721.1	PI0006721.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane