PI0006688 (gene) Melon (PI 482460) v1

Overview


Name	PI0006688
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Transcription termination factor MTEF1
Location	chr06: 4887096 .. 4888570 (-)
RNA-Seq Expression	PI0006688
Synteny	PI0006688

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCTTCCTTCCTTTTCTTATTTTCTTTCCTCTCTCTGTCTCCCACTCCGCCGATCGCTGATGCTCCGCCGCCGCCCATTTTGCTTTTCTGTTCTCTCATACCTTCATCCTCTTCTGAGGCGTTTGTAGTTTCTCCCATTCTTCTTCTCAACAAGGAACCAACAGGTCTGTCTTCCTTCGCCTCGCAGTTCTTACAGTCATGTATAACTTGTTTCGCACAATCATTCTACTTAGATCTCCATCGTCAGTCTTTACTCACGGATTTTCCGAAAGTCCGTTGAAATCTCTCAGATGCTTATCGACCTCTTCTGAGATTGTATCATCTCCGAAATCTATTTCGTTTGCTTCTAGTGATGTTCAGCTCAAGAACAAACGGAAGACCGTAATTGCGTTTCTTAAGAATCAGGGATTCTCTGAATCACAAATCTCTGACCTTGCCAAGACGGTGCCTGAAATTTTTCTGCGAACCTCAAGAATACCCTATTGCCCAAATTTTTGTTTTTGCAATATAAAGGTCTTTCTTCCCCGGAGATTGTCAAATTCGTATGTGCAACTCCTAGTGTTTTAAATTCAAGTTTATTAGACCAAATTATTCCAGCCTTTGATTACATGGAAGCCGTGCTTGGAACTGAGGAGAGTGCTGTCGCTGCCATAAAACGCTTTGCACGTATTATCGCTTTGGATGTTCGATTTTCAGTTGGTCCCAACATTGAACTTCTGAAAAAAATTGGAGTGCCGGATTCAAGTATTTTAACTTATCTTCAGTACCAGCCTAGTTTGTTCTTGACAAATACCTACCGATTCAAGGAGATGGTAGAGAGAGTTGCGGAAATGGGATTCGATCCTCAACAATTGAAGTTTATTGTTGGTATTTTTGGTGTGCGATCAATGACCAAATCTGCATGGGATAAGAAGGTTGAACTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCAGTTTGGCTTTTAGAAGGAATCCATGTTGTATGGTGGCTTCTGAGGATAAGATTAATGCTACAATTGATTTTTTTGTCAACAAAATGGGATGGGAATTATCTGTCATTGCTAGAAGACCAGGTTTATTTGCATATAGTTTGAAGAAGAGGATTATGCCTAGAAGCTATGTTTACAAGGTTTTGCTGTCAAAGGGTTTGATTAAGAAGAAACCCGCGAGTTATTTATTTTTTTCGACTCCTAACAACTGTTTCATAAAAAAATTCATCAACCCTCATAAGGAGAAGATTCCTGGATTGTTGGAGTCGTATGAACAGAAATTAATGGATTCTAGAAGATGAACATGTTCGATTTCCTTGAAATTTTAATATTTACCTGTTTTATGTCTGAACAACTAAAATTTATAGATTGACTTGGTGTATCTTCTTTCTATCCCTTCTTTTTGTTCATCCTTAGTTTGTATCTTCCGTATGGCTTCTGCATTTGTATTGTGTTAAAATAAATATAATTTTTTTTAGAA

mRNA sequence

TTCCTTCCTTCCTTTTCTTATTTTCTTTCCTCTCTCTGTCTCCCACTCCGCCGATCGCTGATGCTCCGCCGCCGCCCATTTTGCTTTTCTGTTCTCTCATACCTTCATCCTCTTCTGAGGCGTTTGTAGTTTCTCCCATTCTTCTTCTCAACAAGGAACCAACAGGTCTGTCTTCCTTCGCCTCGCAGTTCTTACAGTCATGTATAACTTGTTTCGCACAATCATTCTACTTAGATCTCCATCGTCAGTCTTTACTCACGGATTTTCCGAAAGTCCGTTGAAATCTCTCAGATGCTTATCGACCTCTTCTGAGATTGTATCATCTCCGAAATCTATTTCGTTTGCTTCTAGTGATGTTCAGCTCAAGAACAAACGGAAGACCGTAATTGCGTTTCTTAAGAATCAGGGATTCTCTGAATCACAAATCTCTGACCTTGCCAAGACGGTGCCTGAAATTTTTCTGCGAACCTCAAGAATACCCTATTGCCCAAATTTTTGTTTTTGCAATATAAAGGTCTTTCTTCCCCGGAGATTGTCAAATTCGTATGTGCAACTCCTAGTGTTTTAAATTCAAGTTTATTAGACCAAATTATTCCAGCCTTTGATTACATGGAAGCCGTGCTTGGAACTGAGGAGAGTGCTGTCGCTGCCATAAAACGCTTTGCACGTATTATCGCTTTGGATGTTCGATTTTCAGTTGGTCCCAACATTGAACTTCTGAAAAAAATTGGAGTGCCGGATTCAAGTATTTTAACTTATCTTCAGTACCAGCCTAGTTTGTTCTTGACAAATACCTACCGATTCAAGGAGATGGTAGAGAGAGTTGCGGAAATGGGATTCGATCCTCAACAATTGAAGTTTATTGTTGGTATTTTTGGTGTGCGATCAATGACCAAATCTGCATGGGATAAGAAGGTTGAACTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCAGTTTGGCTTTTAGAAGGAATCCATGTTGTATGGTGGCTTCTGAGGATAAGATTAATGCTACAATTGATTTTTTTGTCAACAAAATGGGATGGGAATTATCTGTCATTGCTAGAAGACCAGGTTTATTTGCATATAGTTTGAAGAAGAGGATTATGCCTAGAAGCTATGTTTACAAGGTTTTGCTGTCAAAGGGTTTGATTAAGAAGAAACCCGCGAGTTATTTATTTTTTTCGACTCCTAACAACTGTTTCATAAAAAAATTCATCAACCCTCATAAGGAGAAGATTCCTGGATTGTTGGAGTCGTATGAACAGAAATTAATGGATTCTAGAAGATGAACATGTTCGATTTCCTTGAAATTTTAATATTTACCTGTTTTATGTCTGAACAACTAAAATTTATAGATTGACTTGGTGTATCTTCTTTCTATCCCTTCTTTTTGTTCATCCTTAGTTTGTATCTTCCGTATGGCTTCTGCATTTGTATTGTGTTAAAATAAATATAATTTTTTTTAGAA

Coding sequence (CDS)

ATGGAAGCCGTGCTTGGAACTGAGGAGAGTGCTGTCGCTGCCATAAAACGCTTTGCACGTATTATCGCTTTGGATGTTCGATTTTCAGTTGGTCCCAACATTGAACTTCTGAAAAAAATTGGAGTGCCGGATTCAAGTATTTTAACTTATCTTCAGTACCAGCCTAGTTTGTTCTTGACAAATACCTACCGATTCAAGGAGATGGTAGAGAGAGTTGCGGAAATGGGATTCGATCCTCAACAATTGAAGTTTATTGTTGGTATTTTTGGTGTGCGATCAATGACCAAATCTGCATGGGATAAGAAGGTTGAACTTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCAGTTTGGCTTTTAGAAGGAATCCATGTTGTATGGTGGCTTCTGAGGATAAGATTAATGCTACAATTGATTTTTTTGTCAACAAAATGGGATGGGAATTATCTGTCATTGCTAGAAGACCAGGTTTATTTGCATATAGTTTGAAGAAGAGGATTATGCCTAGAAGCTATGTTTACAAGGTTTTGCTGTCAAAGGGTTTGATTAAGAAGAAACCCGCGAGTTATTTATTTTTTTCGACTCCTAACAACTGTTTCATAAAAAAATTCATCAACCCTCATAAGGAGAAGATTCCTGGATTGTTGGAGTCGTATGAACAGAAATTAATGGATTCTAGAAGATGA

Protein sequence

MEAVLGTEESAVAAIKRFARIIALDVRFSVGPNIELLKKIGVPDSSILTYLQYQPSLFLTNTYRFKEMVERVAEMGFDPQQLKFIVGIFGVRSMTKSAWDKKVELYRKWGLSEEEISLAFRRNPCCMVASEDKINATIDFFVNKMGWELSVIARRPGLFAYSLKKRIMPRSYVYKVLLSKGLIKKKPASYLFFSTPNNCFIKKFINPHKEKIPGLLESYEQKLMDSRR

Homology

[Close]

BLAST of PI0006688 vs. ExPASy TrEMBL
Match: A0A1S4DSL0 (uncharacterized protein LOC103483824 OS=Cucumis melo OX=3656 GN=LOC103483824 PE=3 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.2e-86
Identity = 158/228 (69.30%), Postives = 189/228 (82.89%), Query Frame = 0


Query: 1   MEAVLGTEESAVAAIKRFARIIALDVRFSVGPNIELLKKIGVPDSSILTYLQYQPSLFLT 60
           ++AVLG+EE  +A IK+FA I+  D+R SVGPNIE+LK+IGV DS+IL YLQYQP +FL 
Sbjct: 130 LQAVLGSEEKTLATIKKFAGILIKDLRISVGPNIEILKQIGVQDSNILKYLQYQPRMFLI 189

Query: 61  NTYRFKEMVERVAEMGFDPQQLKFIVGIFGVRSMTKSAWDKKVELYRKWGLSEEEISLAF 120
           N+ RFKE+VERV EMGF+P +L+F+V +F +RSMTKS WDKKVE+YRKWGLSEEE SLAF
Sbjct: 190 NSIRFKEVVERVTEMGFNPDRLQFVVAVFALRSMTKSTWDKKVEVYRKWGLSEEEFSLAF 249

Query: 121 RRNPCCMVASEDKINATIDFFVNKMGWELSVIARRPGLFAYSLKKRIMPRSYVYKVLLSK 180
           RRNP CM  SEDKINA +DFFVNK+GWE S  ARRP L +YSLKKRI+PR YVY+VLLSK
Sbjct: 250 RRNPLCMAFSEDKINAVMDFFVNKIGWESSFFARRPALISYSLKKRILPRGYVYQVLLSK 309

Query: 181 GLIKKKPASYLFFSTPNNCFIKKFINPHKEKIPGLLESYEQKLMDSRR 229
           GLIKK  + +LFF      FI+K INPHKE+IPGLLE Y+QK+MDSRR
Sbjct: 310 GLIKKHKSHFLFFECTEKRFIEKIINPHKEQIPGLLELYKQKVMDSRR 357

[Close]

BLAST of PI0006688 vs. ExPASy TrEMBL
Match: A0A5D3CWB6 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00910 PE=3 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 3.4e-84
Identity = 159/228 (69.74%), Postives = 185/228 (81.14%), Query Frame = 0


Query: 1   MEAVLGTEESAVAAIKRFARIIALDVRFSVGPNIELLKKIGVPDSSILTYLQYQPSLFLT 60
           ++AVLG+EE  +AAIKRFARI+A D+R SVGPNIE LK+ GVPDS+IL YLQYQP  FLT
Sbjct: 138 IQAVLGSEEKTLAAIKRFARILAGDLRLSVGPNIESLKQFGVPDSNILKYLQYQPRRFLT 197

Query: 61  NTYRFKEMVERVAEMGFDPQQLKFIVGIFGVRSMTKSAWDKKVELYRKWGLSEEEISLAF 120
           N+ RFKE VER  EMGF+PQQ++F+V    ++ +TKS WDKKVE+YRKWGLSEEEI L F
Sbjct: 198 NSIRFKETVERATEMGFNPQQMQFVVAAKVLQEITKSTWDKKVEVYRKWGLSEEEIRLIF 257

Query: 121 RRNPCCMVASEDKINATIDFFVNKMGWELSVIARRPGLFAYSLKKRIMPRSYVYKVLLSK 180
           R+NP CM  SEDKIN TIDFFVNK+GWE S IARRP L  YSLKKRI+PR YVY+VL SK
Sbjct: 258 RKNPRCMTFSEDKINDTIDFFVNKIGWESSFIARRPTLITYSLKKRILPRGYVYQVLQSK 317

Query: 181 GLIKKKPASYLFFSTPNNCFIKKFINPHKEKIPGLLESYEQKLMDSRR 229
           GLIKK      FF +P N FI+KFINP KE+IPGLLE Y+QKLMDSR+
Sbjct: 318 GLIKKHENLVSFFESPENSFIEKFINPQKEQIPGLLELYKQKLMDSRK 365

[Close]

BLAST of PI0006688 vs. ExPASy TrEMBL
Match: A0A1S4DSL9 (uncharacterized protein LOC107990389 OS=Cucumis melo OX=3656 GN=LOC107990389 PE=3 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 3.4e-84
Identity = 159/228 (69.74%), Postives = 185/228 (81.14%), Query Frame = 0


Query: 1   MEAVLGTEESAVAAIKRFARIIALDVRFSVGPNIELLKKIGVPDSSILTYLQYQPSLFLT 60
           ++AVLG+EE  +AAIKRFARI+A D+R SVGPNIE LK+ GVPDS+IL YLQYQP  FLT
Sbjct: 138 IQAVLGSEEKTLAAIKRFARILAGDLRLSVGPNIESLKQFGVPDSNILKYLQYQPRRFLT 197

Query: 61  NTYRFKEMVERVAEMGFDPQQLKFIVGIFGVRSMTKSAWDKKVELYRKWGLSEEEISLAF 120
           N+ RFKE VER  EMGF+PQQ++F+V    ++ +TKS WDKKVE+YRKWGLSEEEI L F
Sbjct: 198 NSIRFKETVERATEMGFNPQQMQFVVAAKVLQEITKSTWDKKVEVYRKWGLSEEEIRLIF 257

Query: 121 RRNPCCMVASEDKINATIDFFVNKMGWELSVIARRPGLFAYSLKKRIMPRSYVYKVLLSK 180
           R+NP CM  SEDKIN TIDFFVNK+GWE S IARRP L  YSLKKRI+PR YVY+VL SK
Sbjct: 258 RKNPRCMTFSEDKINDTIDFFVNKIGWESSFIARRPTLITYSLKKRILPRGYVYQVLQSK 317

Query: 181 GLIKKKPASYLFFSTPNNCFIKKFINPHKEKIPGLLESYEQKLMDSRR 229
           GLIKK      FF +P N FI+KFINP KE+IPGLLE Y+QKLMDSR+
Sbjct: 318 GLIKKHENLVSFFESPENSFIEKFINPQKEQIPGLLELYKQKLMDSRK 365

[Close]

BLAST of PI0006688 vs. ExPASy TrEMBL
Match: A0A5A7U0W3 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00790 PE=3 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 6.4e-83
Identity = 156/228 (68.42%), Postives = 185/228 (81.14%), Query Frame = 0


Query: 1   MEAVLGTEESAVAAIKRFARIIALDVRFSVGPNIELLKKIGVPDSSILTYLQYQPSLFLT 60
           ++A+LG+EE  + AIKRFA I+  D+R S GP+IE+LK+ GVPDS+IL YLQ+QP LFLT
Sbjct: 138 IQAMLGSEEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLT 197

Query: 61  NTYRFKEMVERVAEMGFDPQQLKFIVGIFGVRSMTKSAWDKKVELYRKWGLSEEEISLAF 120
           N  RFKE VERV EMGF+PQQ++F+V +F +RSMTKS WDKKVE+YRKWGLSEEE+ LAF
Sbjct: 198 NPIRFKESVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAF 257

Query: 121 RRNPCCMVASEDKINATIDFFVNKMGWELSVIARRPGLFAYSLKKRIMPRSYVYKVLLSK 180
           RR P CM+ASEDKIN  +DFFVNK+G E S  ARRP L   SLKKRI+PR YVY+VLLSK
Sbjct: 258 RRYPWCMIASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSK 317

Query: 181 GLIKKKPASYLFFSTPNNCFIKKFINPHKEKIPGLLESYEQKLMDSRR 229
           GLIK      LFF +P   FI+KFINPHKE+IPGLLE YE+KLMDSRR
Sbjct: 318 GLIKNHKNLVLFFESPEKPFIEKFINPHKEQIPGLLELYEEKLMDSRR 365

[Close]

BLAST of PI0006688 vs. ExPASy TrEMBL
Match: A0A5A7U0V4 (Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00670 PE=3 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 6.4e-83
Identity = 156/226 (69.03%), Postives = 189/226 (83.63%), Query Frame = 0


Query: 1   MEAVLGTEESAVAAIKRFARIIALDVRFSVGPNIELLKKIGVPDSSILTYLQYQPSLFLT 60
           ++AVLG+EE  +AAIK+FA I+A D+R SVGPNIE+LK+ GVPDS+IL YLQYQP +FLT
Sbjct: 466 IQAVLGSEEKTLAAIKQFAGILAQDLRISVGPNIEILKQNGVPDSNILKYLQYQPRVFLT 525

Query: 61  NTYRFKEMVERVAEMGFDPQQLKFIVGIFGVRSMTKSAWDKKVELYRKWGLSEEEISLAF 120
           ++ RFKE+VERVAEMGF+PQQL+F+V +F +R+MTKS WDKKVE+YRKWGLSEEEI LAF
Sbjct: 526 SSIRFKEIVERVAEMGFNPQQLQFVVAVFALRAMTKSTWDKKVEVYRKWGLSEEEICLAF 585

Query: 121 RRNPCCMVASEDKINATIDFFVNKMGWELSVIARRPGLFAYSLKKRIMPRSYVYKVLLSK 180
           RR+P CM+ SEDKIN  +DFFVNKMG E S  ARRP + + SLKKRI+PR YVY+VLLSK
Sbjct: 586 RRHPWCMMVSEDKINGAMDFFVNKMGCESSFAARRPLVLSLSLKKRILPRGYVYQVLLSK 645

Query: 181 GLIKKKPASYLFFSTPNNCFIKKFINPHKEKIPGLLESYEQKLMDS 227
           GLIKK    +LFF +  + FI+KFINPHKE+IPGLLE YEQ   DS
Sbjct: 646 GLIKKHGNLHLFFGSSEHRFIEKFINPHKEQIPGLLELYEQMRTDS 691

[Close]

BLAST of PI0006688 vs. NCBI nr
Match: XP_016898975.1 (PREDICTED: uncharacterized protein LOC103483824 [Cucumis melo] >XP_016898976.1 PREDICTED: uncharacterized protein LOC103483824 [Cucumis melo])

HSP 1 Score: 329.3 bits (843), Expect = 2.6e-86
Identity = 158/228 (69.30%), Postives = 189/228 (82.89%), Query Frame = 0


Query: 1   MEAVLGTEESAVAAIKRFARIIALDVRFSVGPNIELLKKIGVPDSSILTYLQYQPSLFLT 60
           ++AVLG+EE  +A IK+FA I+  D+R SVGPNIE+LK+IGV DS+IL YLQYQP +FL 
Sbjct: 130 LQAVLGSEEKTLATIKKFAGILIKDLRISVGPNIEILKQIGVQDSNILKYLQYQPRMFLI 189

Query: 61  NTYRFKEMVERVAEMGFDPQQLKFIVGIFGVRSMTKSAWDKKVELYRKWGLSEEEISLAF 120
           N+ RFKE+VERV EMGF+P +L+F+V +F +RSMTKS WDKKVE+YRKWGLSEEE SLAF
Sbjct: 190 NSIRFKEVVERVTEMGFNPDRLQFVVAVFALRSMTKSTWDKKVEVYRKWGLSEEEFSLAF 249

Query: 121 RRNPCCMVASEDKINATIDFFVNKMGWELSVIARRPGLFAYSLKKRIMPRSYVYKVLLSK 180
           RRNP CM  SEDKINA +DFFVNK+GWE S  ARRP L +YSLKKRI+PR YVY+VLLSK
Sbjct: 250 RRNPLCMAFSEDKINAVMDFFVNKIGWESSFFARRPALISYSLKKRILPRGYVYQVLLSK 309

Query: 181 GLIKKKPASYLFFSTPNNCFIKKFINPHKEKIPGLLESYEQKLMDSRR 229
           GLIKK  + +LFF      FI+K INPHKE+IPGLLE Y+QK+MDSRR
Sbjct: 310 GLIKKHKSHFLFFECTEKRFIEKIINPHKEQIPGLLELYKQKVMDSRR 357

[Close]

BLAST of PI0006688 vs. NCBI nr
Match: XP_031739012.1 (uncharacterized protein LOC116402803 [Cucumis sativus])

HSP 1 Score: 324.3 bits (830), Expect = 8.3e-85
Identity = 157/228 (68.86%), Postives = 186/228 (81.58%), Query Frame = 0


Query: 1   MEAVLGTEESAVAAIKRFARIIALDVRFSVGPNIELLKKIGVPDSSILTYLQYQPSLFLT 60
           ++AV G+EE  +A IK+F  I+  D+R SVGPNIE+LK+IGVPDS+IL YLQYQP +FL 
Sbjct: 136 IQAVFGSEEKTLAVIKQFVGILVKDLRISVGPNIEILKQIGVPDSNILRYLQYQPRVFLK 195

Query: 61  NTYRFKEMVERVAEMGFDPQQLKFIVGIFGVRSMTKSAWDKKVELYRKWGLSEEEISLAF 120
           N   FKE VERV EMGF+PQQL+F+V +F +RSMTKS WDKKV +YRKWG SEEEI L+F
Sbjct: 196 NPILFKETVERVVEMGFNPQQLQFVVAVFALRSMTKSTWDKKVAVYRKWGFSEEEIRLSF 255

Query: 121 RRNPCCMVASEDKINATIDFFVNKMGWELSVIARRPGLFAYSLKKRIMPRSYVYKVLLSK 180
           R++P CM+ SEDKIN  +DFFVNKMG+  SV ARRP L + SLKKRI PR YVY+VL+SK
Sbjct: 256 RKHPWCMMRSEDKINGVMDFFVNKMGFNSSVAARRPVLLSLSLKKRIFPRGYVYQVLVSK 315

Query: 181 GLIKKKPASYLFFSTPNNCFIKKFINPHKEKIPGLLESYEQKLMDSRR 229
           GLIKK     LFF +P NCFI+KFINPHKE+IPGLLESYEQKLMDSRR
Sbjct: 316 GLIKKHHNPLLFFESPENCFIEKFINPHKEQIPGLLESYEQKLMDSRR 363

[Close]

BLAST of PI0006688 vs. NCBI nr
Match: XP_016898958.1 (PREDICTED: uncharacterized protein LOC107990389 [Cucumis melo] >KAA0049483.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16163.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 321.2 bits (822), Expect = 7.0e-84
Identity = 159/228 (69.74%), Postives = 185/228 (81.14%), Query Frame = 0


Query: 1   MEAVLGTEESAVAAIKRFARIIALDVRFSVGPNIELLKKIGVPDSSILTYLQYQPSLFLT 60
           ++AVLG+EE  +AAIKRFARI+A D+R SVGPNIE LK+ GVPDS+IL YLQYQP  FLT
Sbjct: 138 IQAVLGSEEKTLAAIKRFARILAGDLRLSVGPNIESLKQFGVPDSNILKYLQYQPRRFLT 197

Query: 61  NTYRFKEMVERVAEMGFDPQQLKFIVGIFGVRSMTKSAWDKKVELYRKWGLSEEEISLAF 120
           N+ RFKE VER  EMGF+PQQ++F+V    ++ +TKS WDKKVE+YRKWGLSEEEI L F
Sbjct: 198 NSIRFKETVERATEMGFNPQQMQFVVAAKVLQEITKSTWDKKVEVYRKWGLSEEEIRLIF 257

Query: 121 RRNPCCMVASEDKINATIDFFVNKMGWELSVIARRPGLFAYSLKKRIMPRSYVYKVLLSK 180
           R+NP CM  SEDKIN TIDFFVNK+GWE S IARRP L  YSLKKRI+PR YVY+VL SK
Sbjct: 258 RKNPRCMTFSEDKINDTIDFFVNKIGWESSFIARRPTLITYSLKKRILPRGYVYQVLQSK 317

Query: 181 GLIKKKPASYLFFSTPNNCFIKKFINPHKEKIPGLLESYEQKLMDSRR 229
           GLIKK      FF +P N FI+KFINP KE+IPGLLE Y+QKLMDSR+
Sbjct: 318 GLIKKHENLVSFFESPENSFIEKFINPQKEQIPGLLELYKQKLMDSRK 365

[Close]

BLAST of PI0006688 vs. NCBI nr
Match: XP_008439383.1 (PREDICTED: uncharacterized protein LOC103484198 [Cucumis melo])

HSP 1 Score: 317.0 bits (811), Expect = 1.3e-82
Identity = 156/228 (68.42%), Postives = 185/228 (81.14%), Query Frame = 0


Query: 1   MEAVLGTEESAVAAIKRFARIIALDVRFSVGPNIELLKKIGVPDSSILTYLQYQPSLFLT 60
           ++A+LG+EE  + AIKRFA I+  D+R S GP+IE+LK+ GVPDS+IL YLQ+QP LFLT
Sbjct: 24  IQAMLGSEEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLT 83

Query: 61  NTYRFKEMVERVAEMGFDPQQLKFIVGIFGVRSMTKSAWDKKVELYRKWGLSEEEISLAF 120
           N  RFKE VERV EMGF+PQQ++F+V +F +RSMTKS WDKKVE+YRKWGLSEEE+ LAF
Sbjct: 84  NPIRFKESVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAF 143

Query: 121 RRNPCCMVASEDKINATIDFFVNKMGWELSVIARRPGLFAYSLKKRIMPRSYVYKVLLSK 180
           RR P CM+ASEDKIN  +DFFVNK+G E S  ARRP L   SLKKRI+PR YVY+VLLSK
Sbjct: 144 RRYPWCMIASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSK 203

Query: 181 GLIKKKPASYLFFSTPNNCFIKKFINPHKEKIPGLLESYEQKLMDSRR 229
           GLIK      LFF +P   FI+KFINPHKE+IPGLLE YE+KLMDSRR
Sbjct: 204 GLIKNHKNLVLFFESPEKPFIEKFINPHKEQIPGLLELYEEKLMDSRR 251

[Close]

BLAST of PI0006688 vs. NCBI nr
Match: KAA0049473.1 (transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16152.1 transcription termination factor MTEF1 [Cucumis melo var. makuwa])

HSP 1 Score: 317.0 bits (811), Expect = 1.3e-82
Identity = 156/228 (68.42%), Postives = 185/228 (81.14%), Query Frame = 0


Query: 1   MEAVLGTEESAVAAIKRFARIIALDVRFSVGPNIELLKKIGVPDSSILTYLQYQPSLFLT 60
           ++A+LG+EE  + AIKRFA I+  D+R S GP+IE+LK+ GVPDS+IL YLQ+QP LFLT
Sbjct: 138 IQAMLGSEEKTLVAIKRFAGILTWDLRISAGPSIEILKQSGVPDSNILKYLQFQPRLFLT 197

Query: 61  NTYRFKEMVERVAEMGFDPQQLKFIVGIFGVRSMTKSAWDKKVELYRKWGLSEEEISLAF 120
           N  RFKE VERV EMGF+PQQ++F+V +F +RSMTKS WDKKVE+YRKWGLSEEE+ LAF
Sbjct: 198 NPIRFKESVERVTEMGFNPQQMQFLVAVFALRSMTKSTWDKKVEVYRKWGLSEEEVRLAF 257

Query: 121 RRNPCCMVASEDKINATIDFFVNKMGWELSVIARRPGLFAYSLKKRIMPRSYVYKVLLSK 180
           RR P CM+ASEDKIN  +DFFVNK+G E S  ARRP L   SLKKRI+PR YVY+VLLSK
Sbjct: 258 RRYPWCMIASEDKINDVMDFFVNKIGCESSFAARRPILIYRSLKKRILPRGYVYQVLLSK 317

Query: 181 GLIKKKPASYLFFSTPNNCFIKKFINPHKEKIPGLLESYEQKLMDSRR 229
           GLIK      LFF +P   FI+KFINPHKE+IPGLLE YE+KLMDSRR
Sbjct: 318 GLIKNHKNLVLFFESPEKPFIEKFINPHKEQIPGLLELYEEKLMDSRR 365

[Close]

BLAST of PI0006688 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 150.6 bits (379), Expect = 1.5e-36
Identity = 77/220 (35.00%), Postives = 132/220 (60.00%), Query Frame = 0


Query: 1   MEAVLGTEESAVAAIKRFARIIALDVRFSVGPNIELLKKIGVPDSSILTYLQYQPSLFLT 60
           +++VL ++E  VAA++R   +   D   ++ PNI  + + GVP+  I   L + P   + 
Sbjct: 180 LKSVLDSDEKIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQ 239

Query: 61  NTYRFKEMVERVAEMGFDPQQLKFIVGIFGVRSM-TKSAWDKKVELYRKWGLSEEEISLA 120
             + F+ + ++  EMGF+PQ+  F++ I  +     KS WDK  E+Y++WG SE++I  A
Sbjct: 240 KNHEFQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCA 299

Query: 121 FRRNPCCMVASEDKINATIDFFVNKMGWELSVIARRPGLFAYSLKKRIMPRSYVYKVLLS 180
           F+++P CM+ SE KIN T+++FVN+M      IA+ P +  +SL+KRI+PR  V KVL+S
Sbjct: 300 FKKHPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVS 359

Query: 181 KGLIKKKPASYLFFSTPNNCFIKKFINPHKEKIPGLLESY 220
            GL+K+  +           F++K +  ++E++P L+  Y
Sbjct: 360 NGLVKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMNLY 399

[Close]

BLAST of PI0006688 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 140.2 bits (352), Expect = 2.1e-33
Identity = 71/220 (32.27%), Postives = 130/220 (59.09%), Query Frame = 0


Query: 1   MEAVLGTEESAVAAIKRFARIIALDVRFSVGPNIELLKKIGVPDSSILTYLQYQPSLFLT 60
           ++++L  EES V  +KR  R  +L +   V   + + +++GVPD SI   +Q  P  F +
Sbjct: 167 LKSILVEEESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFS 226

Query: 61  NTYRFKEMVERVAEMGFDPQQLKFIVGIFGVRSMTKSAWDKKVELYRKWGLSEEEISLAF 120
              RF E++ RV   GFDP++  F+  +      ++SA ++K +L++ +G S+E+   A 
Sbjct: 227 RERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAI 286

Query: 121 RRNPCCMVASEDKINATIDFFVNKMGWELSVIARRPGLFAYSLKKRIMPRSYVYKVLLSK 180
            R P C+  S++KI  T+++ VN +G +   I  RP + + S++KRI PR+ V  +LLSK
Sbjct: 287 MRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSK 346

Query: 181 GLIKKKPASYL-FFSTPNNCFIKKFINPHKEKIPGLLESY 220
           GL+KK+  +Y       ++ F+ KF+  +++++P L++ +
Sbjct: 347 GLVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQPF 386

[Close]

BLAST of PI0006688 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 107.8 bits (268), Expect = 1.1e-23
Identity = 55/189 (29.10%), Postives = 104/189 (55.03%), Query Frame = 0


Query: 21  IIALDVRFSVGPNIELLKKIGVPDSSILTYLQYQPSLFLTNTYRFKEMVERVAEMGFDPQ 80
           +++ D    + PNI  L+  G+  S + + L+ QP +F  +  + +  V R  ++GF   
Sbjct: 172 LLSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLN 231

Query: 81  QLKFIVGIFGVRSMTKSAWDKKVELYRKWGLSEEEISLAFRRNPCCMVASEDKINATIDF 140
               +  +  + S+++  +D+KV+L+   G SE+EI+   RR+P  +  SEDK+    +F
Sbjct: 232 SRMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEF 291

Query: 141 FVNKMGWELSVIARRPGLFAYSLKKRIMPRSYVYKVLLSKGLI----KKKPASYLFFSTP 200
           ++ +MG E   +A+RP + +Y+L+KR++PR  V ++L  KGL+    KKK          
Sbjct: 292 YLKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMT 351

Query: 201 NNCFIKKFI 206
              F++K++
Sbjct: 352 EEAFLEKYV 360

[Close]

BLAST of PI0006688 vs. TAIR 10
Match: AT5G23930.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 97.4 bits (241), Expect = 1.5e-20
Identity = 66/253 (26.09%), Postives = 111/253 (43.87%), Query Frame = 0


Query: 33  NIELLKKIGVPDSSILTYLQYQPSLFLTNTYRFKEMVERVAEMGFDPQQLKFIVGIFGVR 92
           N+ +L+K+GVP   +L  L    +  +    RF+E V+++ EMGFDP+  KF+  ++   
Sbjct: 190 NVSVLRKLGVPQRLLLNLL-ISRAKPVCGKERFEESVKKIVEMGFDPKSPKFVNALYVFY 249

Query: 93  SMTKSAWDKKVELY--------------RKW---------------------GLSEEEIS 152
            ++    ++KV  Y              +KW                     GL++EE+ 
Sbjct: 250 ELSDKTIEEKVNAYIRLGLSVNEVWAVFKKWPFSLKYSEKNIIQKFETLKRVGLTKEEVC 309

Query: 153 LAFRRNPCCMVASEDKINATI-----------------------------------DFFV 212
           L  ++ P C+  SE+KI  ++                                   +F V
Sbjct: 310 LVVKKYPECVGTSEEKIVKSVKTFLELGFTKDEVLMIIKRHPQCIGLAADSVKKKTEFLV 369

Query: 213 NKMGWELSVIARRPGLFAYSLKKRIMPRSYVYKVLLSKGLIKKKPASYLFFSTPNNCFIK 216
             MGW L V+A  P +  +SL+K ++PR  V K L+S GLI + PA     ++P   F+K
Sbjct: 370 KTMGWPLKVVASTPIVLGFSLEKFVLPRCNVIKALMSNGLIGEMPAISSVLTSPKLKFLK 429

[Close]

BLAST of PI0006688 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 95.9 bits (237), Expect = 4.5e-20
Identity = 58/215 (26.98%), Postives = 99/215 (46.05%), Query Frame = 0


Query: 33  NIELLKKIGVPDSSILTYLQYQPSLFLTNTYRFKEMVERVAEMGFDPQQLKFIVGIFGVR 92
           N+ +L+++G+P   +L  L    S  +    +F+E +++V EMGFDP   KF+  +  + 
Sbjct: 192 NVSVLRELGMP-HKLLFSLLISDSQPVCGKEKFEETLKKVVEMGFDPTTSKFVEALQVIY 251

Query: 93  SMTKSAWDKKVELY--------------RKW---------------------GLSEEEIS 152
            M +   ++KV LY              +KW                     G S +E +
Sbjct: 252 KMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFA 311

Query: 153 LAFRRNPCCMVASEDKINATIDFFVNKMGWELSVIARRPGLFAYSLKKRIMPRSYVYKVL 212
              +  P C+  S + +    +F V KM W L  +   P +F YSL+KRI+PR  V K L
Sbjct: 312 KMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKAL 371

The following BLAST results are available for this feature:

BLAST of PI0006688 vs.


Match Name	E-value	Identity	Description

BLAST of PI0006688 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DSL0	1.2e-86	69.30	uncharacterized protein LOC103483824 OS=Cucumis melo OX=3656 GN=LOC103483824 PE=...	[more]
A0A5D3CWB6	3.4e-84	69.74	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S4DSL9	3.4e-84	69.74	uncharacterized protein LOC107990389 OS=Cucumis melo OX=3656 GN=LOC107990389 PE=...	[more]
A0A5A7U0W3	6.4e-83	68.42	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7U0V4	6.4e-83	69.03	Transcription termination factor MTEF1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of PI0006688 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016898975.1	2.6e-86	69.30	PREDICTED: uncharacterized protein LOC103483824 [Cucumis melo] >XP_016898976.1 P...	[more]
XP_031739012.1	8.3e-85	68.86	uncharacterized protein LOC116402803 [Cucumis sativus]	[more]
XP_016898958.1	7.0e-84	69.74	PREDICTED: uncharacterized protein LOC107990389 [Cucumis melo] >KAA0049483.1 tra...	[more]
XP_008439383.1	1.3e-82	68.42	PREDICTED: uncharacterized protein LOC103484198 [Cucumis melo]	[more]
KAA0049473.1	1.3e-82	68.42	transcription termination factor MTEF1 [Cucumis melo var. makuwa] >TYK16152.1 tr...	[more]

BLAST of PI0006688 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	1.5e-36	35.00	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	2.1e-33	32.27	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	1.1e-23	29.10	Mitochondrial transcription termination factor family protein	[more]
AT5G23930.1	1.5e-20	26.09	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	4.5e-20	26.98	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 149..183 e-value: 2.6 score: 17.1 coord: 48..78 e-value: 1100.0 score: 3.4 coord: 12..43 e-value: 9.4 score: 15.2 coord: 117..148 e-value: 0.16 score: 21.1
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 13..189 e-value: 3.6E-24 score: 85.3
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 4..225
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 2..213 e-value: 1.2E-43 score: 151.2
None	No IPR available	PANTHER	PTHR13068:SF160	TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 4..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0006688.1	PI0006688.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding