PI0006619 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAAGATCAATTTGTTGAAGAAATTAAGGGCCAAGTTCTAGGCTATGGAGAAGAGCAAATCATTCCCCAAGTACTCATCCTCAACCTCGGGTGAGTTTGGTTTCCAAACTCGATCCAACTCTTACAATTTCAACGGCCCGACTGCAAAAGCAACCGGGTTCTCGACCTCGACCGATCCCGAGCTCCAAAGGAAGAGAAGGATTGCGTCTTATAATGTTTTCAACATGGAAAACAAAGTCAAGTCGAGTGTAAAGAACAGCTTCAAGTGGATCAAAACTAAGTTTAGTGACATTCGCTATGGTTTGTGAGTTTCCTTTTTTTTTTTTTTTTCTTTTTTGATCACTGTGTAAACAAATTTGGCATTTTGATCTGTCTTTGAAGACTTGGAACCAAATTCAAGATATAATTAAAGAGTTTGGAAGGTGTGTGTGTGTTTGGCTGTGGCTTTATTTTGTTTCTCCATGCAAATATATAAGCCTTTTTTTCCCAACATATACAAAATCATTTACCTCTAAATTTATTCTTATTTTGGCTGATCTTTTTTTCTAATTTCCGTTTTGATTGTGTATTTAGGTTGAATTTTAAAAATCCTCTCTCACCATAAGTTGGCTTCAATTATATGCATGAACTTTTTTTTTTATGGGTGGTAGATTAAACCTCCAACCTTTGGGACAGAGGTCACTAGTTCAAGCTCACTTTGATTTGAAGTTTGTTATAAAACAATCATGGTAGGTAGTTTACCGCTAAATTCATAAAAGAAAGGGTAGATATGTATTTGCTTATGTGAACAAAATCTACACATACACACGAAAAGAAATAAGGGCACATATGCCTGATGTGAACCATAACTGTTGTTGCCATCTTCCTGATCCTTTCAACCTCAGGCCATCAATTTTGTGTGTTTTTTGTTAAATGATTTTTTTTATGCAAATCTAATTCTCAAATTTACTTTCGATATGTATTTAGATTTGTTTATCTATTATTTTAACACATAATTAACCCAGCATAAAACTTTTCATCCATCAATTTAACAGCAAAAATCTTAAGAGTGTTGTTTTTATAAAAATAAAATTAAAGAAAATAAAACGTCCAACAGTTGATTTAAAAATTTTCAAAGTTTTGGAGATAATTGAAAATCAAAGTGTCATGGTTCCATAGTATTTTTGGTAATTTAAGCTTTATTTTGAAGTTAATATTTCTTTTAACAAATCTTATAAACATAGTTCATGGAAAGGGGTTGAATAAGCAATAACTTGGAGTGAGTACTTGAGAGCCATCTACCTATAAAAAAATATGTATATATAACTCCCTCTATTTACATTCT AGAAGATCAATTTGTTGAAGAAATTAAGGGCCAAGTTCTAGGCTATGGAGAAGAGCAAATCATTCCCCAAGTACTCATCCTCAACCTCGGGTGAGTTTGGTTTCCAAACTCGATCCAACTCTTACAATTTCAACGGCCCGACTGCAAAAGCAACCGGGTTCTCGACCTCGACCGATCCCGAGCTCCAAAGGAAGAGAAGGATTGCGTCTTATAATGTTTTCAACATGGAAAACAAAGTCAAGTCGAGTGTAAAGAACAGCTTCAAGTGGATCAAAACTAAGTTTAGTGACATTCGCTATGGTTTGTGAGTTTCCTTTTTTTTTTTTTTTTCTTTTTTGATCACTGTGTAAACAAATTTGGCATTTTGATCTGTCTTTGAAGACTTGGAACCAAATTCAAGATATAATTAAAGAGTTTGGAAGGTGTGTGTGTGTTTGGCTGTGGCTTTATTTTGTTTCTCCATGCAAATATATAAGCCTTTTTTTCCCAACATATACAAAATCATTTACCTCTAAATTTATTCTTATTTTGGCTGATCTTTTTTTCTAATTTCCGTTTTGATTGTGTATTTAGGTTGAATTTTAAAAATCCTCTCTCACCATAAGTTGGCTTCAATTATATGCATGAACTTTTTTTTTTATGGGTGGTAGATTAAACCTCCAACCTTTGGGACAGAGGTCACTAGTTCAAGCTCACTTTGATTTGAAGTTTGTTATAAAACAATCATGGTAGGTAGTTTACCGCTAAATTCATAAAAGAAAGGGTAGATATGTATTTGCTTATGTGAACAAAATCTACACATACACACGAAAAGAAATAAGGGCACATATGCCTGATGTGAACCATAACTGTTGTTGCCATCTTCCTGATCCTTTCAACCTCAGGCCATCAATTTTGTGTGTTTTTTGTTAAATGATTTTTTTTATGCAAATCTAATTCTCAAATTTACTTTCGATATGTATTTAGATTTGTTTATCTATTATTTTAACACATAATTAACCCAGCATAAAACTTTTCATCCATCAATTTAACAGCAAAAATCTTAAGAGTGTTGTTTTTATAAAAATAAAATTAAAGAAAATAAAACGTCCAACAGTTGATTTAAAAATTTTCAAAGTTTTGGAGATAATTGAAAATCAAAGTGTCATGGTTCCATAGTATTTTTGGTAATTTAAGCTTTATTTTGAAGTTAATATTTCTTTTAACAAATCTTATAAACATAGTTCATGGAAAGGGGTTGAATAAGCAATAACTTGGAGTGAGTACTTGAGAGCCATCTACCTATAAAAAAATATGTATATATAACTCCCTCTATTTACATTCT ATGGAGAAGAGCAAATCATTCCCCAAGTACTCATCCTCAACCTCGGGTGAGTTTGGTTTCCAAACTCGATCCAACTCTTACAATTTCAACGGCCCGACTGCAAAAGCAACCGGGTTCTCGACCTCGACCGATCCCGAGCTCCAAAGGAAGAGAAGGATTGCGTCTTATAATGTTTTCAACATGGAAAACAAAGTCAAGTCGAGTGTAAAGAACAGCTTCAAGTGGATCAAAACTAAGTTTAGTGACATTCGCTATGGTTTGTGA MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTAKATGFSTSTDPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL Homology
BLAST of PI0006619 vs. ExPASy TrEMBL
Match: A0A0A0K8Y3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G017090 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 8.2e-39 Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 0
BLAST of PI0006619 vs. ExPASy TrEMBL
Match: A0A5A7T8F8 (Mediator of RNA polymerase II transcription subunit 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold121G00710 PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 2.4e-38 Identity = 85/87 (97.70%), Postives = 85/87 (97.70%), Query Frame = 0
BLAST of PI0006619 vs. ExPASy TrEMBL
Match: A0A6J1EWA0 (uncharacterized protein LOC111436683 OS=Cucurbita moschata OX=3662 GN=LOC111436683 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.6e-37 Identity = 84/87 (96.55%), Postives = 84/87 (96.55%), Query Frame = 0
BLAST of PI0006619 vs. ExPASy TrEMBL
Match: A0A6J1ICY9 (uncharacterized protein LOC111472683 OS=Cucurbita maxima OX=3661 GN=LOC111472683 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 6.5e-36 Identity = 82/87 (94.25%), Postives = 82/87 (94.25%), Query Frame = 0
BLAST of PI0006619 vs. ExPASy TrEMBL
Match: A0A2P5BV48 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_207620 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 5.3e-30 Identity = 69/87 (79.31%), Postives = 79/87 (90.80%), Query Frame = 0
BLAST of PI0006619 vs. NCBI nr
Match: KGN45893.1 (hypothetical protein Csa_005289 [Cucumis sativus]) HSP 1 Score: 169.1 bits (427), Expect = 1.7e-38 Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 0
BLAST of PI0006619 vs. NCBI nr
Match: KAA0039168.1 (Mediator of RNA polymerase II transcription subunit 8 [Cucumis melo var. makuwa]) HSP 1 Score: 167.5 bits (423), Expect = 4.9e-38 Identity = 85/87 (97.70%), Postives = 85/87 (97.70%), Query Frame = 0
BLAST of PI0006619 vs. NCBI nr
Match: XP_023536368.1 (uncharacterized protein LOC111797558 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 164.9 bits (416), Expect = 3.2e-37 Identity = 84/87 (96.55%), Postives = 84/87 (96.55%), Query Frame = 0
BLAST of PI0006619 vs. NCBI nr
Match: XP_022930185.1 (uncharacterized protein LOC111436683 [Cucurbita moschata] >KAG6592294.1 hypothetical protein SDJN03_14640, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025131.1 hypothetical protein SDJN02_13954, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 164.9 bits (416), Expect = 3.2e-37 Identity = 84/87 (96.55%), Postives = 84/87 (96.55%), Query Frame = 0
BLAST of PI0006619 vs. NCBI nr
Match: XP_022974055.1 (uncharacterized protein LOC111472683 [Cucurbita maxima]) HSP 1 Score: 159.5 bits (402), Expect = 1.3e-35 Identity = 82/87 (94.25%), Postives = 82/87 (94.25%), Query Frame = 0
BLAST of PI0006619 vs. TAIR 10
Match: AT4G09890.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 88.2 bits (217), Expect = 3.6e-18 Identity = 52/93 (55.91%), Postives = 68/93 (73.12%), Query Frame = 0
BLAST of PI0006619 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 57.0 bits (136), Expect = 8.8e-09 Identity = 33/85 (38.82%), Postives = 52/85 (61.18%), Query Frame = 0
BLAST of PI0006619 vs. TAIR 10
Match: AT1G72720.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 55.8 bits (133), Expect = 2.0e-08 Identity = 39/100 (39.00%), Postives = 53/100 (53.00%), Query Frame = 0
BLAST of PI0006619 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 49.7 bits (117), Expect = 1.4e-06 Identity = 20/44 (45.45%), Postives = 34/44 (77.27%), Query Frame = 0
BLAST of PI0006619 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) ) HSP 1 Score: 48.5 bits (114), Expect = 3.1e-06 Identity = 20/36 (55.56%), Postives = 27/36 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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