PI0006558 (gene) Melon (PI 482460) v1

Overview


Name	PI0006558
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Signal recognition particle receptor subunit beta
Location	chr10: 18567949 .. 18572380 (+)
RNA-Seq Expression	PI0006558
Synteny	PI0006558

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAGTTTAATTAAATGGTAAATAACATTACTTTCATCCCTAAAAATAAAAAATGTTGTTAAAAAAATAGTCTTACAACTTAAAACTCTACGAGAGATAAACTATATAACTTGAACATATTAACCGACACTTCATAACTCAACTTAGCGCCAAAAATGATAAGGGTGTGTATTGTCCAGTTTTAATTAACGTTGAAAAATGGAGAATCTCATTACTGGCCCTCCAACTCCAACGGCACAGGCCTCGTACATGAGGGGCAAGAATGGTTTTTAACAAGCCACTTCAATGTACATGACCGCAGGGAATCCTTACCACCTCCATCTCTTTCCGATTGAATTCATTCAAACAGATACTACAATCTCCCAAATCCTCCTCAATCTCTCCAGCTTCACCTTCTTCCTCGCCTCCATCCGCAACCACCACTCCGCGGTTAAATCTGCTGTTAGTCGTAATTCATATGATTTGAGTGGTGTCGATGACGGCAACGATGTGAAACCTAGTCTCTCTGTTTCCCGCCGTGATTCGGTCGATAATCAAAGCGATCTGCTCAGCGATGACCTCGCAAGGGACGGAGTCAATGTCGAGCGATGAAAGCAATAGTTGGATGTGGAATTGGAAGACTATTGGATCGTCGAGGAGTTCGTGGGGAGAAATAGGTAAGAGAGAGCGTTGGCTTGAATACTTTATACCAAAAAAATTCGAAAAAGATAAAAATGAAAATGAAAATGAAAGGGTCAAAAACACATATTTGTAACTTCTCAAACTTGAATACTCCCATCTTAAAATTTATTTTCACGTCTAGTGATTTCATATTCATGACTTCACACACACACACACATGTAACTTTAACAAATTATCACTACATTTCATTACTCAACTCATACAATTTTTAAGTAATTTAATTATTATAGGACACCATATATGTTTTGTTTAAATACTAGTTATAATATAAGACATGTTTCTTTGAAGAATTTGAACTAAAAATCTCTCGATGTCAGTTGTGTTAAACTCTTATTAATTAACATGTTTCTTTTGTGAGAATATATGAAGTAGGTGGATTTGTGATTTATAAAAGTGCCAAGAAAAAATACCCAATTTCAATCTATAAATAAGAAAAAAAAATAGAACTATTTTCAACTTGATAATAGAAAAAAGGACTAATTGAAACACATAAAGTCGAACAAAAAAATGAAAGTGTAAAAAATCGAAAAGCATAACAATAATAAATTAAACTAAGTAAAACCAATCTATACGTTTAATTCATTTCTTTAAAGAAAAAAACAATTAATTTTGTTTTATTCTCGATTGACCTCAAAATCGACCAAATTAGTGAAAGGTAGGGAACAATGTAATAATTGATTGTAATAATTGTTACAAGTGATTTTTAGTTAAAGGATAGAAGCGACATAACAAAAAAAGGACGCAAGTGGTGGGGCAAAAAAATGACAGCGAACCAACAACCAACTCGATGAAGAAGATAAGATGGAAATGTAGAAAAGTACTGCTTTTTGAGTAAAAAGAGTTTGGACTTGATCAAAGATGAGGAGATAAGGGTTTGATTCTTCATATTTGGTGAACAAATTTCAAATTATATGATAAAGAAAATGATATTTTAACAATAAATTTTATTATCCAAAATTTTGTTGAAAAAAGAAAGAAAGAAAGAAAGAAATCTTTCCATTAAATAAATAATTTTTTCAATACAATAATTGAATATGAGAAGATTCGAACCGCTTATCAGCAGACTAAAATGCGGACTGAGAGTGAGAGATAGAAATTTTGGGGCAAATAATAGAAAAAAAAACTTTAAGAAGAAAAAGAAAAAAAGGAAAAGGGAGGAAAGGAGAGGAAAGACACGGTGGTGGAGTTCTAGGGCTCACCACGAGCTTGTGTACTTCTGGCTAATTTCATTCATCCCCAAATTGATCGTCTTCTCATTTCAGATTTGCAGCAGAATCATCGGATCAGGTACTATTTTCCTCGATTCTTCATTTCATGATCTATGTTTTGTGGGTTTCATCTAATGTCCTCAATTGGGGTTTTTTGGATATAGGGTTTCGAACAGACTTTGTGGGCTAGGAAATTTTTACTGAAGAATTCAACTTCTGGAGCGTATTGTCTTTGAAATTTTGAAAATGGAGGGTACGGAACAGTGGAAGGTTCAGGTAGAACAATTGAAGGTCCGGATGGAGCAATGGCTGGAACAAGGCTTGGAGTTTGTTCACCAAATACCCCCAATTCAACTCTACGTTGGGGTTGGTGTGTTGTTGTTTACCACCCTACTTCTTTTATTGGGTGAGTCTTTCTCTTTATTTGTTTAAATTTTCGTTCTTTAGCTCTGTAGTTGAATGTCGCTTTCTGTAATTGTATATGGTGAAACATTTGGGAATTTGAAGTTAACGACCCCTTGTCTCTTGGCAGCTCGCTTGTTTAAGCGCAGGAAATCGAATACCATTTTACTCAGTGGGCTCAGTGGAAGTGGGAAAACTATTCTTTTTTATCGAGTAAGCATCAGCATTTCAGGTTTCTTCCTGTATTTTATAGAAATTCAATTCTTGTCGGATATTTGATTAGTAGTTTTTTGGTTTATTCGTTTACTTTGGTTTGAATTGAATGGTTAAGCCTTTTCTTATATGAGTTTGTACACTAGTTGTATTTCTCACCATCTTCTCGAGAAGTAGCCTTAAGGGCACTAATGTTATTTAGGAACATTGTCCACATTTCATGTAAGAATGCCTATTCTTCAAGGTCAGTTAAGAAGTTAGTAAAACGGTGTCTGTGCATGCCTTTTGTTTTATGTTATGTATAGGTGTTTGGTATCTTGGTTACTTCAAAGCTTAATTTAATGATTGATTCAAAGCAATCAATACTGTTATATACTTTAAGATAAAGTCTATATATTAGTTAAGGATTTGTCCTTGACAGGGCTTGGGGGGAGACCCCTCTTTCCTTCTAGATGCATTTATAATGTTTTTTATGTCTTTGCAGCTTCGCGATGGTTCTTCTCATCAGGGTACTGTTACATCAATGGAACCTAACGAGGGCACTTTTGTGCTTCATTCTGAAATAGCAAAGGTAATTTATGTATTCTAGAACTGACGTGTAGGAACTGAGAATGCTCCATTTCTGATCCATTGCAGCCTTAAAATAAAAACTAATAATGCTTGTGGTTTCTATTTCCAGTAGTCTAACTTTCTTTTTTGCAGTACTGGATCAAACTTAAACTAACAGATATTGCTTTTTCTTTGTGTGCTTTGATAGAAGGACAAACTGAAGCCTGTTCATCTTGTTGATGTCCCTGGGCATTCTCGCCTTAGAGCCAAACTAGATGACTTTTTGCCTCAAGCAGCTGGTGTAGTCTTTGTGGTGGATGCTTTGGATTTTTTGCCGAACTGTCGTGCAGCTTCAGAGTAATGGATTAGTCTTCTCAACTTTTTACTTTTCTATGCGTTTGTGCATCTACTATAGTAAATAGGAGCGTGTAAGCTATAAGTTTTGAGTTGCCCAAGTTCTGCATGAATGTGTAACATTAGTTTGATTCCCCTGAATTCTTACAATTCTCTCTTTGGAAATCATCCTACATCACAATTGAAAGCATGTAATTTGCAGCATACGCTCTCACATGTGCTGTACATAATATGTTTTAGTACGCAAAACAGTTAGATAAATAAATGTCTTATGTTACTAGTTTAATTTAATTAAATTTCTCTTGAAGGTACCTTTATGACATTCTGACTAATGCGAGTGTTGTGAAGAAGAAAATCCCTGTCCTGATACTATGCAACAAAACAGACAAGGTGACAGCCCACACAAAGGAGTTTATCAATAGGCAGATGGAAAAAGAGATGTATGACACTCAACTTTCTATATCACGAACATTCTTTTAATGATCTGTTAAGCAAACTATTCAAAATTACAGTAGGTTTTATTATCTGCAATGAATTTGTATTTCAATTTTCGACGTCATGATTTTTATGTTTGTACAGTGACAAGTTACGTGTATCGAGAAGTGCAATCTCAGCTGCTGATATCTCAAATGACTTCACACTAGGAATACCTGGAAAAGCATTTTCGTTCATACAGTGTCATAACAAAGTTGCAGTTGCTGAAGCCTCTGGATTGACGGGTGAAGTATCTGAGGTGGAGCAATTTATAAGGGAAAATGTGAAGTTCTAGATGTATATTCGATTCTACGTGTTGATTGGTGCTTTTTTGCCCCTTCGATATGGAACCCCGACATTTGTACTTTTGAGAATTTCTGAATTTCATCCCAATTTTTGTAGTTTCTTAAGACTGAAGAAGTTATATCTCCATACCTTCTTCCCTTGTTCATAAAAGGACCAATATTTTAGTGGGAAACTGTCAGTACAATGTCACACAAAGCCAGAAACGTTATTTGTTTAAATAATAGAAATTGAGATGTTGTTGCTATC

mRNA sequence

TAAGTTTAATTAAATGGTAAATAACATTACTTTCATCCCTAAAAATAAAAAATGTTGTTAAAAAAATAGTCTTACAACTTAAAACTCTACGAGAGATAAACTATATAACTTGAACATATTAACCGACACTTCATAACTCAACTTAGCGCCAAAAATGATAAGGGTGTGTATTGTCCAGTTTTAATTAACGTTGAAAAATGGAGAATCTCATTACTGGCCCTCCAACTCCAACGGCACAGGCCTCGTACATGAGGGGCAAGAATGGTTTTTAACAAGCCACTTCAATGTACATGACCGCAGGGAATCCTTACCACCTCCATCTCTTTCCGATTGAATTCATTCAAACAGATACTACAATCTCCCAAATCCTCCTCAATCTCTCCAGCTTCACCTTCTTCCTCGCCTCCATCCGCAACCACCACTCCGCGGTTAAATCTGCTGTTAGTCGTAATTCATATGATTTGAGTGGTGTCGATGACGGCAACGATGTGAAACCTAGTCTCTCTGTTTCCCGCCGTGATTCGGTCGATAATCAAAGCGATCTGCTCAGCGATGACCTCGCAAGGGACGGAGTCAATGTCGAGCGATGAAAGCAATAGTTGGATGTGGAATTGGAAGACTATTGGATCGTCGAGGAGTTCGTGGGGAGAAATAGGTAAGAGAGAGCGTTGGCTTGAATACTTTATACCAAAAAAATTCGAAAAAGATAAAAATGAAAATGAAAATGAAAGGGTCAAAAACACATATTTGTAACTTCTCAAACTTGAATACTCCCATCTTAAAATTTATTTTCACGTCTAGTGATTTCATATTCATGACTTCACACACACACACACATGTAACTTTAACAAATTATCACTACATTTCATTACTCAACTCATACAATTTTTAAGTAATTTAATTATTATAGGACACCATATATGTTTTGTTTAAATACTAGTTATAATATAAGACATGTTTCTTTGAAGAATTTGAACTAAAAATCTCTCGATGTCAGTTGTGTTAAACTCTTATTAATTAACATGTTTCTTTTGTGAGAATATATGAAGTAGGTGGATTTGTGATTTATAAAAGTGCCAAGAAAAAATACCCAATTTCAATCTATAAATAAGAAAAAAAAATAGAACTATTTTCAACTTGATAATAGAAAAAAGGACTAATTGAAACACATAAAGTCGAACAAAAAAATGAAAGTGTAAAAAATCGAAAAGCATAACAATAATAAATTAAACTAAGTAAAACCAATCTATACGTTTAATTCATTTCTTTAAAGAAAAAAACAATTAATTTTGTTTTATTCTCGATTGACCTCAAAATCGACCAAATTAGTGAAAGGTAGGGAACAATGTAATAATTGATTGTAATAATTGTTACAAGTGATTTTTAGTTAAAGGATAGAAGCGACATAACAAAAAAAGGACGCAAGTGGTGGGGCAAAAAAATGACAGCGAACCAACAACCAACTCGATGAAGAAGATAAGATGGAAATGTAGAAAAGTACTGCTTTTTGAGTAAAAAGAGTTTGGACTTGATCAAAGATGAGGAGATAAGGGTTTGATTCTTCATATTTGGTGAACAAATTTCAAATTATATGATAAAGAAAATGATATTTTAACAATAAATTTTATTATCCAAAATTTTGTTGAAAAAAGAAAGAAAGAAAGAAAGAAATCTTTCCATTAAATAAATAATTTTTTCAATACAATAATTGAATATGAGAAGATTCGAACCGCTTATCAGCAGACTAAAATGCGGACTGAGAGTGAGAGATAGAAATTTTGGGGCAAATAATAGAAAAAAAAACTTTAAGAAGAAAAAGAAAAAAAGGAAAAGGGAGGAAAGGAGAGGAAAGACACGGTGGTGGAGTTCTAGGGCTCACCACGAGCTTGTGTACTTCTGGCTAATTTCATTCATCCCCAAATTGATCGTCTTCTCATTTCAGATTTGCAGCAGAATCATCGGATCAGGGTTTCGAACAGACTTTGTGGGCTAGGAAATTTTTACTGAAGAATTCAACTTCTGGAGCGTATTGTCTTTGAAATTTTGAAAATGGAGGGTACGGAACAGTGGAAGGTTCAGGTAGAACAATTGAAGGTCCGGATGGAGCAATGGCTGGAACAAGGCTTGGAGTTTGTTCACCAAATACCCCCAATTCAACTCTACGTTGGGGTTGGTGTGTTGTTGTTTACCACCCTACTTCTTTTATTGGCTCGCTTGTTTAAGCGCAGGAAATCGAATACCATTTTACTCAGTGGGCTCAGTGGAAGTGGGAAAACTATTCTTTTTTATCGACTTCGCGATGGTTCTTCTCATCAGGGTACTGTTACATCAATGGAACCTAACGAGGGCACTTTTGTGCTTCATTCTGAAATAGCAAAGAAGGACAAACTGAAGCCTGTTCATCTTGTTGATGTCCCTGGGCATTCTCGCCTTAGAGCCAAACTAGATGACTTTTTGCCTCAAGCAGCTGGTGTAGTCTTTGTGGTGGATGCTTTGGATTTTTTGCCGAACTGTCGTGCAGCTTCAGAGTACCTTTATGACATTCTGACTAATGCGAGTGTTGTGAAGAAGAAAATCCCTGTCCTGATACTATGCAACAAAACAGACAAGGTGACAGCCCACACAAAGGAGTTTATCAATAGGCAGATGGAAAAAGAGATTGACAAGTTACGTGTATCGAGAAGTGCAATCTCAGCTGCTGATATCTCAAATGACTTCACACTAGGAATACCTGGAAAAGCATTTTCGTTCATACAGTGTCATAACAAAGTTGCAGTTGCTGAAGCCTCTGGATTGACGGGTGAAGTATCTGAGGTGGAGCAATTTATAAGGGAAAATGTGAAGTTCTAGATGTATATTCGATTCTACGTGTTGATTGGTGCTTTTTTGCCCCTTCGATATGGAACCCCGACATTTGTACTTTTGAGAATTTCTGAATTTCATCCCAATTTTTGTAGTTTCTTAAGACTGAAGAAGTTATATCTCCATACCTTCTTCCCTTGTTCATAAAAGGACCAATATTTTAGTGGGAAACTGTCAGTACAATGTCACACAAAGCCAGAAACGTTATTTGTTTAAATAATAGAAATTGAGATGTTGTTGCTATC

Coding sequence (CDS)

ATGGAGGGTACGGAACAGTGGAAGGTTCAGGTAGAACAATTGAAGGTCCGGATGGAGCAATGGCTGGAACAAGGCTTGGAGTTTGTTCACCAAATACCCCCAATTCAACTCTACGTTGGGGTTGGTGTGTTGTTGTTTACCACCCTACTTCTTTTATTGGCTCGCTTGTTTAAGCGCAGGAAATCGAATACCATTTTACTCAGTGGGCTCAGTGGAAGTGGGAAAACTATTCTTTTTTATCGACTTCGCGATGGTTCTTCTCATCAGGGTACTGTTACATCAATGGAACCTAACGAGGGCACTTTTGTGCTTCATTCTGAAATAGCAAAGAAGGACAAACTGAAGCCTGTTCATCTTGTTGATGTCCCTGGGCATTCTCGCCTTAGAGCCAAACTAGATGACTTTTTGCCTCAAGCAGCTGGTGTAGTCTTTGTGGTGGATGCTTTGGATTTTTTGCCGAACTGTCGTGCAGCTTCAGAGTACCTTTATGACATTCTGACTAATGCGAGTGTTGTGAAGAAGAAAATCCCTGTCCTGATACTATGCAACAAAACAGACAAGGTGACAGCCCACACAAAGGAGTTTATCAATAGGCAGATGGAAAAAGAGATTGACAAGTTACGTGTATCGAGAAGTGCAATCTCAGCTGCTGATATCTCAAATGACTTCACACTAGGAATACCTGGAAAAGCATTTTCGTTCATACAGTGTCATAACAAAGTTGCAGTTGCTGAAGCCTCTGGATTGACGGGTGAAGTATCTGAGGTGGAGCAATTTATAAGGGAAAATGTGAAGTTCTAG

Protein sequence

MEGTEQWKVQVEQLKVRMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLLARLFKRRKSNTILLSGLSGSGKTILFYRLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADISNDFTLGIPGKAFSFIQCHNKVAVAEASGLTGEVSEVEQFIRENVKF

Homology

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BLAST of PI0006558 vs. ExPASy Swiss-Prot
Match: Q54XX1 (Signal recognition particle receptor subunit beta OS=Dictyostelium discoideum OX=44689 GN=srprb PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.4e-24
Identity = 69/206 (33.50%), Postives = 107/206 (51.94%), Query Frame = 0


Query: 58  KRRKSNTILLSGLSGSGKTILFYRLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPV 117
           K ++   I + GLS +GKT L   L +      T TS+  N G ++  ++       K +
Sbjct: 81  KVKRGVNIAILGLSNAGKTALLLNLTNVDKKISTHTSITTNNGVYITENK-------KKL 140

Query: 118 HLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIP 177
            ++DVPG+ + +A L   L  +A +++V+D   F+ N    ++YLYDILTN SV +KKIP
Sbjct: 141 PIIDVPGNGKAKASLPKILSNSACIIYVIDGTTFIDNSTQEAQYLYDILTNESVYQKKIP 200

Query: 178 VLILCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSA----ISAADISNDFTLGIPGKAFS 237
           VL+  NK D  +    E +   +E+E+D LR +R A    +   +   D  LGI G  F 
Sbjct: 201 VLVFNNKMDLDSTIDTEQVKNILERELDDLRRTRGATPIVLGQEEDKKDIYLGIEGTPFQ 260

Query: 238 FIQCHNKVAVA--EASGLTGEVSEVE 258
           F    N V  +   AS   GE+ E++
Sbjct: 261 FDHLPNDVQFSNGSASPSNGELKEID 279

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BLAST of PI0006558 vs. ExPASy Swiss-Prot
Match: Q4FZX7 (Signal recognition particle receptor subunit beta OS=Rattus norvegicus OX=10116 GN=Srprb PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.2e-22
Identity = 81/238 (34.03%), Postives = 123/238 (51.68%), Query Frame = 0


Query: 19  EQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLLARLFKRRKS-NTILLSGLSGSGKTI 78
           + +L+   + + Q  P  L V V VL     L+    ++ R+ S   +L  GL  SGKT+
Sbjct: 18  QPYLDSLRQELQQRDPTLLSVAVAVLAVLLTLVFWKFIWSRKSSQRAVLFVGLCDSGKTL 77

Query: 79  LFYRLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLVDVPGHSRLRAK-LDDFL 138
           LF RL  G  ++ T TS+  +   + +++     ++   + L+D+PGH  LR + LD F 
Sbjct: 78  LFVRLLTG-QYRDTQTSITDSSAIYKVNN-----NRGNSLTLIDLPGHESLRLQFLDRFK 137

Query: 139 PQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFI 198
             A  VVFVVD+  F    +  +E+LY +L ++  +K     L+ CNK D   A + + I
Sbjct: 138 SSARAVVFVVDSATFQREVKDVAEFLYQVLIDSMALKNTPAFLVACNKQDIAMAKSAKLI 197

Query: 199 NRQMEKEIDKLRVSRSAI-SAADISN--DFTLGIPGKAFSFIQCHNKVAVAEASGLTG 252
            +Q+EKE++ LRV+RSA  S  D S+     LG  GK F F Q   KV   E S   G
Sbjct: 198 QQQLEKELNTLRVTRSAAPSTLDSSSTAPAQLGKKGKEFEFSQLPLKVEFLECSAKGG 249

[Close]

BLAST of PI0006558 vs. ExPASy Swiss-Prot
Match: P47758 (Signal recognition particle receptor subunit beta OS=Mus musculus OX=10090 GN=Srprb PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.2e-22
Identity = 81/238 (34.03%), Postives = 124/238 (52.10%), Query Frame = 0


Query: 19  EQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLLARLFKRRKS-NTILLSGLSGSGKTI 78
           + +L+   + + Q  P  L V V +L     L+    ++ R+ S   +L  GL  SGKT+
Sbjct: 18  QPYLDSLRQELQQRDPTLLSVAVALLAVLLTLVFWKFIWSRKSSQRAVLFVGLCDSGKTL 77

Query: 79  LFYRLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLVDVPGHSRLRAK-LDDFL 138
           LF RL  G  ++ T TS+  +   + +++     ++   + L+D+PGH  LR + LD F 
Sbjct: 78  LFVRLLTG-QYRDTQTSITDSSAIYKVNN-----NRGNSLTLIDLPGHESLRFQLLDRFK 137

Query: 139 PQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFI 198
             A  VVFVVD+  F    +  +E+LY +L ++  +K    +LI CNK D   A + + I
Sbjct: 138 SSARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNSPSLLIACNKQDIAMAKSAKLI 197

Query: 199 NRQMEKEIDKLRVSRSAI-SAADISN--DFTLGIPGKAFSFIQCHNKVAVAEASGLTG 252
            +Q+EKE++ LRV+RSA  S  D S+     LG  GK F F Q   KV   E S   G
Sbjct: 198 QQQLEKELNTLRVTRSAAPSTLDSSSTAPAQLGKKGKEFEFSQLPLKVEFLECSAKGG 249

[Close]

BLAST of PI0006558 vs. ExPASy Swiss-Prot
Match: Q9Y5M8 (Signal recognition particle receptor subunit beta OS=Homo sapiens OX=9606 GN=SRPRB PE=1 SV=3)

HSP 1 Score: 102.8 bits (255), Expect = 6.0e-21
Identity = 83/239 (34.73%), Postives = 127/239 (53.14%), Query Frame = 0


Query: 19  EQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLLARLFKRRKSN--TILLSGLSGSGKT 78
           + +L+   + + Q  P  L V V VL    L L+  +L + R+S+   +LL GL  SGKT
Sbjct: 20  QPYLDTLRQELQQTDPTLLSVVVAVLA-VLLTLVFWKLIRSRRSSQRAVLLVGLCDSGKT 79

Query: 79  ILFYRLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLVDVPGHSRLRAK-LDDF 138
           +LF RL  G  ++ T TS+  +   + +++     ++   + L+D+PGH  LR + L+ F
Sbjct: 80  LLFVRLLTG-LYRDTQTSITDSCAVYRVNN-----NRGNSLTLIDLPGHESLRLQFLERF 139

Query: 139 LPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEF 198
              A  +VFVVD+  F    +  +E+LY +L ++  +K     LI CNK D   A + + 
Sbjct: 140 KSSARAIVFVVDSAAFQREVKDVAEFLYQVLIDSMGLKNTPSFLIACNKQDIAMAKSAKL 199

Query: 199 INRQMEKEIDKLRVSRSAI-SAADISN--DFTLGIPGKAFSFIQCHNKVAVAEASGLTG 252
           I +Q+EKE++ LRV+RSA  S  D S+     LG  GK F F Q   KV   E S   G
Sbjct: 200 IQQQLEKELNTLRVTRSAAPSTLDSSSTAPAQLGKKGKEFEFSQLPLKVEFLECSAKGG 251

[Close]

BLAST of PI0006558 vs. ExPASy Swiss-Prot
Match: P36057 (Signal recognition particle receptor subunit beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SRP102 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.1e-09
Identity = 51/149 (34.23%), Postives = 72/149 (48.32%), Query Frame = 0


Query: 64  TILLSGLSGSGKTILFYRLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLVDVP 123
           +I+++G   SGKT L   L    S + TV S EP        S +          LVD P
Sbjct: 40  SIIIAGPQNSGKTSLL-TLLTTDSVRPTVVSQEPLSAADYDGSGVT---------LVDFP 99

Query: 124 GHSRLRAKLDDFLPQAA----GVVFVVDALDFLPNCRAASEYLYDILT-NASVVKKKIPV 183
           GH +LR KL D+L   A    G++F+VD+          +E+L DIL+   S  +  I +
Sbjct: 100 GHVKLRYKLSDYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCENGIDI 159

Query: 184 LILCNKTDKVTAHTKEFINRQMEKEIDKL 208
           LI CNK++  TA     I   +E EI K+
Sbjct: 160 LIACNKSELFTARPPSKIKDALESEIQKV 178

[Close]

BLAST of PI0006558 vs. ExPASy TrEMBL
Match: A0A0A0KSA6 (Signal recognition particle receptor subunit beta OS=Cucumis sativus OX=3659 GN=Csa_5G600910 PE=3 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 8.7e-140
Identity = 259/266 (97.37%), Postives = 263/266 (98.87%), Query Frame = 0


Query: 1   MEGTEQWKVQVEQLKVRMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLLARLFKRR 60
           MEGTEQWKVQVEQLKV+MEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLL  RLFKRR
Sbjct: 1   MEGTEQWKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRR 60

Query: 61  KSNTILLSGLSGSGKTILFYRLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120
           KSNTI+LSGLSGSGKTILFY+LRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV
Sbjct: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADISNDFTLGIPGKAFSFIQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADI+NDFTLGIPGKAFSF QCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGIPGKAFSFTQCHNK 240

Query: 241 VAVAEASGLTGEVSEVEQFIRENVKF 267
           VAVAEASGLTGEVSEVEQFIRENVKF
Sbjct: 241 VAVAEASGLTGEVSEVEQFIRENVKF 266

[Close]

BLAST of PI0006558 vs. ExPASy TrEMBL
Match: E5GBI2 (Signal recognition particle receptor subunit beta OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 5.6e-139
Identity = 258/266 (96.99%), Postives = 263/266 (98.87%), Query Frame = 0


Query: 1   MEGTEQWKVQVEQLKVRMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLLARLFKRR 60
           MEGTEQWKVQVEQLKV+MEQWLE+GLEFVHQIPPIQLYVGVGVLLFTTLLLLL RLFKRR
Sbjct: 1   MEGTEQWKVQVEQLKVQMEQWLERGLEFVHQIPPIQLYVGVGVLLFTTLLLLLTRLFKRR 60

Query: 61  KSNTILLSGLSGSGKTILFYRLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120
           KSNTI+LSGLSGSGKTILFY+LRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV
Sbjct: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADISNDFTLGIPGKAFSFIQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAIS ADISNDFTLGIPGKAFSF QC+NK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISTADISNDFTLGIPGKAFSFTQCYNK 240

Query: 241 VAVAEASGLTGEVSEVEQFIRENVKF 267
           VAVAEASGLTGEVSEVEQFIRENVKF
Sbjct: 241 VAVAEASGLTGEVSEVEQFIRENVKF 266

[Close]

BLAST of PI0006558 vs. ExPASy TrEMBL
Match: A0A1S3BEG3 (Signal recognition particle receptor subunit beta OS=Cucumis melo OX=3656 GN=LOC103488993 PE=3 SV=1)

HSP 1 Score: 503.4 bits (1295), Expect = 5.6e-139
Identity = 258/266 (96.99%), Postives = 263/266 (98.87%), Query Frame = 0


Query: 1   MEGTEQWKVQVEQLKVRMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLLARLFKRR 60
           MEGTEQWKVQVEQLKV+MEQWLE+GLEFVHQIPPIQLYVGVGVLLFTTLLLLL RLFKRR
Sbjct: 1   MEGTEQWKVQVEQLKVQMEQWLERGLEFVHQIPPIQLYVGVGVLLFTTLLLLLTRLFKRR 60

Query: 61  KSNTILLSGLSGSGKTILFYRLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120
           KSNTI+LSGLSGSGKTILFY+LRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV
Sbjct: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADISNDFTLGIPGKAFSFIQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAIS ADISNDFTLGIPGKAFSF QC+NK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISTADISNDFTLGIPGKAFSFTQCYNK 240

Query: 241 VAVAEASGLTGEVSEVEQFIRENVKF 267
           VAVAEASGLTGEVSEVEQFIRENVKF
Sbjct: 241 VAVAEASGLTGEVSEVEQFIRENVKF 266

[Close]

BLAST of PI0006558 vs. ExPASy TrEMBL
Match: A0A6J1DE59 (Signal recognition particle receptor subunit beta OS=Momordica charantia OX=3673 GN=LOC111019241 PE=3 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 9.3e-134
Identity = 246/265 (92.83%), Postives = 258/265 (97.36%), Query Frame = 0


Query: 1   MEGTEQWKVQVEQLKVRMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLLARLFKRR 60
           MEGTEQWKV VEQLKV+MEQWL+QGLE VHQIPPIQLYVGVGVLL TTLLLLL RLFKRR
Sbjct: 1   MEGTEQWKVHVEQLKVQMEQWLQQGLELVHQIPPIQLYVGVGVLLLTTLLLLLTRLFKRR 60

Query: 61  KSNTILLSGLSGSGKTILFYRLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120
           KSNTI+LSGLSGSGKT++FY+LRDGSSHQGTVTSMEPNEGTFVLHSEI+KK+KLKPVHLV
Sbjct: 61  KSNTIVLSGLSGSGKTVIFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKKNKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLD+FLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADISNDFTLGIPGKAFSFIQCHNK 240
           LCNKTDKVTAHTKEFINRQ EKEIDKLRVSRSAISAADI+NDFTLG+PGKAFSF QCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQXEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK 240

Query: 241 VAVAEASGLTGEVSEVEQFIRENVK 266
           V VAEASGLTGEV+EVEQFIRENVK
Sbjct: 241 VTVAEASGLTGEVTEVEQFIRENVK 265

[Close]

BLAST of PI0006558 vs. ExPASy TrEMBL
Match: A0A6J1D1F7 (Signal recognition particle receptor subunit beta OS=Momordica charantia OX=3673 GN=LOC111016123 PE=3 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 2.1e-133
Identity = 245/265 (92.45%), Postives = 257/265 (96.98%), Query Frame = 0


Query: 1   MEGTEQWKVQVEQLKVRMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLLARLFKRR 60
           MEGTEQWKVQ EQ+KV+MEQWL+ GLEFVHQIPPIQLYVGVGVLL TTLLLLL RLFKRR
Sbjct: 1   MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLFKRR 60

Query: 61  KSNTILLSGLSGSGKTILFYRLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120
           KSNTI+L GLSGSGKT+LFY+LRDGSSHQGTVTSMEPNEGTFVLHSEI+KKDKLKPVHLV
Sbjct: 61  KSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLD+FLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADISNDFTLGIPGKAFSFIQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADI+NDFTLG+PGKAFSF QCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK 240

Query: 241 VAVAEASGLTGEVSEVEQFIRENVK 266
           VAV EASGL G+V+EVEQFIRENVK
Sbjct: 241 VAVGEASGLMGQVTEVEQFIRENVK 265

[Close]

BLAST of PI0006558 vs. NCBI nr
Match: XP_004135257.1 (signal recognition particle receptor subunit beta [Cucumis sativus] >KGN51789.1 hypothetical protein Csa_007800 [Cucumis sativus])

HSP 1 Score: 506.1 bits (1302), Expect = 1.8e-139
Identity = 259/266 (97.37%), Postives = 263/266 (98.87%), Query Frame = 0


Query: 1   MEGTEQWKVQVEQLKVRMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLLARLFKRR 60
           MEGTEQWKVQVEQLKV+MEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLL  RLFKRR
Sbjct: 1   MEGTEQWKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRR 60

Query: 61  KSNTILLSGLSGSGKTILFYRLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120
           KSNTI+LSGLSGSGKTILFY+LRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV
Sbjct: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADISNDFTLGIPGKAFSFIQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADI+NDFTLGIPGKAFSF QCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGIPGKAFSFTQCHNK 240

Query: 241 VAVAEASGLTGEVSEVEQFIRENVKF 267
           VAVAEASGLTGEVSEVEQFIRENVKF
Sbjct: 241 VAVAEASGLTGEVSEVEQFIRENVKF 266

[Close]

BLAST of PI0006558 vs. NCBI nr
Match: XP_008446189.1 (PREDICTED: signal recognition particle receptor subunit beta-like [Cucumis melo] >ADN33824.1 signal recognition particle receptor subunit beta [Cucumis melo subsp. melo])

HSP 1 Score: 503.4 bits (1295), Expect = 1.2e-138
Identity = 258/266 (96.99%), Postives = 263/266 (98.87%), Query Frame = 0


Query: 1   MEGTEQWKVQVEQLKVRMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLLARLFKRR 60
           MEGTEQWKVQVEQLKV+MEQWLE+GLEFVHQIPPIQLYVGVGVLLFTTLLLLL RLFKRR
Sbjct: 1   MEGTEQWKVQVEQLKVQMEQWLERGLEFVHQIPPIQLYVGVGVLLFTTLLLLLTRLFKRR 60

Query: 61  KSNTILLSGLSGSGKTILFYRLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120
           KSNTI+LSGLSGSGKTILFY+LRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV
Sbjct: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADISNDFTLGIPGKAFSFIQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAIS ADISNDFTLGIPGKAFSF QC+NK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISTADISNDFTLGIPGKAFSFTQCYNK 240

Query: 241 VAVAEASGLTGEVSEVEQFIRENVKF 267
           VAVAEASGLTGEVSEVEQFIRENVKF
Sbjct: 241 VAVAEASGLTGEVSEVEQFIRENVKF 266

[Close]

BLAST of PI0006558 vs. NCBI nr
Match: XP_038892002.1 (signal recognition particle receptor subunit beta-like [Benincasa hispida])

HSP 1 Score: 495.7 bits (1275), Expect = 2.4e-136
Identity = 251/266 (94.36%), Postives = 259/266 (97.37%), Query Frame = 0


Query: 1   MEGTEQWKVQVEQLKVRMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLLARLFKRR 60
           MEGTEQWKVQVEQLKV+M+QWLEQGL+FVHQIPPIQLYVGVGVLLFTT+LLLL RLFKRR
Sbjct: 1   MEGTEQWKVQVEQLKVQMKQWLEQGLDFVHQIPPIQLYVGVGVLLFTTVLLLLTRLFKRR 60

Query: 61  KSNTILLSGLSGSGKTILFYRLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120
           KSNTI+LSGLSGSGKT+LFY+LRDGSSHQGTVTSMEPNEGTFVLHSEI KKDKLKPVHLV
Sbjct: 61  KSNTIVLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADISNDFTLGIPGKAFSFIQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRS ISAADISNDFTLG+PGKAFSF  CHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSVISAADISNDFTLGVPGKAFSFTHCHNK 240

Query: 241 VAVAEASGLTGEVSEVEQFIRENVKF 267
           V VAEASGL GEVSEVEQFIRENVKF
Sbjct: 241 VTVAEASGLNGEVSEVEQFIRENVKF 266

[Close]

BLAST of PI0006558 vs. NCBI nr
Match: XP_022151281.1 (signal recognition particle receptor subunit beta-like [Momordica charantia])

HSP 1 Score: 486.1 bits (1250), Expect = 1.9e-133
Identity = 246/265 (92.83%), Postives = 258/265 (97.36%), Query Frame = 0


Query: 1   MEGTEQWKVQVEQLKVRMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLLARLFKRR 60
           MEGTEQWKV VEQLKV+MEQWL+QGLE VHQIPPIQLYVGVGVLL TTLLLLL RLFKRR
Sbjct: 1   MEGTEQWKVHVEQLKVQMEQWLQQGLELVHQIPPIQLYVGVGVLLLTTLLLLLTRLFKRR 60

Query: 61  KSNTILLSGLSGSGKTILFYRLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120
           KSNTI+LSGLSGSGKT++FY+LRDGSSHQGTVTSMEPNEGTFVLHSEI+KK+KLKPVHLV
Sbjct: 61  KSNTIVLSGLSGSGKTVIFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKKNKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLD+FLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADISNDFTLGIPGKAFSFIQCHNK 240
           LCNKTDKVTAHTKEFINRQ EKEIDKLRVSRSAISAADI+NDFTLG+PGKAFSF QCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQXEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK 240

Query: 241 VAVAEASGLTGEVSEVEQFIRENVK 266
           V VAEASGLTGEV+EVEQFIRENVK
Sbjct: 241 VTVAEASGLTGEVTEVEQFIRENVK 265

[Close]

BLAST of PI0006558 vs. NCBI nr
Match: XP_022147102.1 (signal recognition particle receptor subunit beta-like isoform X1 [Momordica charantia] >XP_022147104.1 signal recognition particle receptor subunit beta-like isoform X1 [Momordica charantia] >XP_022147105.1 signal recognition particle receptor subunit beta-like isoform X1 [Momordica charantia] >XP_022147106.1 signal recognition particle receptor subunit beta-like isoform X1 [Momordica charantia] >XP_022147107.1 signal recognition particle receptor subunit beta-like isoform X1 [Momordica charantia])

HSP 1 Score: 485.0 bits (1247), Expect = 4.3e-133
Identity = 245/265 (92.45%), Postives = 257/265 (96.98%), Query Frame = 0


Query: 1   MEGTEQWKVQVEQLKVRMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLLARLFKRR 60
           MEGTEQWKVQ EQ+KV+MEQWL+ GLEFVHQIPPIQLYVGVGVLL TTLLLLL RLFKRR
Sbjct: 1   MEGTEQWKVQAEQVKVQMEQWLQLGLEFVHQIPPIQLYVGVGVLLLTTLLLLLTRLFKRR 60

Query: 61  KSNTILLSGLSGSGKTILFYRLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120
           KSNTI+L GLSGSGKT+LFY+LRDGSSHQGTVTSMEPNEGTFVLHSEI+KKDKLKPVHLV
Sbjct: 61  KSNTIVLGGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEISKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLD+FLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADISNDFTLGIPGKAFSFIQCHNK 240
           LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADI+NDFTLG+PGKAFSF QCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGVPGKAFSFSQCHNK 240

Query: 241 VAVAEASGLTGEVSEVEQFIRENVK 266
           VAV EASGL G+V+EVEQFIRENVK
Sbjct: 241 VAVGEASGLMGQVTEVEQFIRENVK 265

[Close]

BLAST of PI0006558 vs. TAIR 10
Match: AT5G05670.2 (signal recognition particle binding )

HSP 1 Score: 389.0 bits (998), Expect = 3.0e-108
Identity = 192/256 (75.00%), Postives = 224/256 (87.50%), Query Frame = 0


Query: 11  VEQLKVRMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLLA-RLFKRRKSNTILLSG 70
           +E LK+  EQW  QG+E++ +IPP QLY  +GVLLFTT+LL L+ RL +R KSNT+LLSG
Sbjct: 4   LEDLKILAEQWSHQGIEYLQKIPPNQLYAAIGVLLFTTILLFLSIRLVRRTKSNTVLLSG 63

Query: 71  LSGSGKTILFYRLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLVDVPGHSRLR 130
           L+GSGKT+LFY+LRDGSSHQGTVTSMEPNEGTFVLHSE  KK K+KPVHLVDVPGHSRLR
Sbjct: 64  LTGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSENTKKGKIKPVHLVDVPGHSRLR 123

Query: 131 AKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVT 190
            KL++FLPQAA +VFVVDAL+FLPNCRAASEYLY+ILTNA+VVKKKIPVL+ CNKTDK+T
Sbjct: 124 PKLEEFLPQAAAIVFVVDALEFLPNCRAASEYLYEILTNANVVKKKIPVLLCCNKTDKLT 183

Query: 191 AHTKEFINRQMEKEIDKLRVSRSAISAADISNDFTLGIPGKAFSFIQCHNKVAVAEASGL 250
           AHTKEFI +QMEKEI+KLR SRSA+S ADI+NDFT+GI G+ FSF  C NKV VAEASGL
Sbjct: 184 AHTKEFIRKQMEKEIEKLRASRSAVSTADIANDFTIGIEGEVFSFTHCSNKVTVAEASGL 243

Query: 251 TGEVSEVEQFIRENVK 266
           TGE  ++E FIRE +K
Sbjct: 244 TGETIQIEDFIREYIK 259

[Close]

BLAST of PI0006558 vs. TAIR 10
Match: AT5G05670.1 (signal recognition particle binding )

HSP 1 Score: 389.0 bits (998), Expect = 3.0e-108
Identity = 192/256 (75.00%), Postives = 224/256 (87.50%), Query Frame = 0


Query: 11  VEQLKVRMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLLA-RLFKRRKSNTILLSG 70
           +E LK+  EQW  QG+E++ +IPP QLY  +GVLLFTT+LL L+ RL +R KSNT+LLSG
Sbjct: 4   LEDLKILAEQWSHQGIEYLQKIPPNQLYAAIGVLLFTTILLFLSIRLVRRTKSNTVLLSG 63

Query: 71  LSGSGKTILFYRLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLVDVPGHSRLR 130
           L+GSGKT+LFY+LRDGSSHQGTVTSMEPNEGTFVLHSE  KK K+KPVHLVDVPGHSRLR
Sbjct: 64  LTGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSENTKKGKIKPVHLVDVPGHSRLR 123

Query: 131 AKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVT 190
            KL++FLPQAA +VFVVDAL+FLPNCRAASEYLY+ILTNA+VVKKKIPVL+ CNKTDK+T
Sbjct: 124 PKLEEFLPQAAAIVFVVDALEFLPNCRAASEYLYEILTNANVVKKKIPVLLCCNKTDKLT 183

Query: 191 AHTKEFINRQMEKEIDKLRVSRSAISAADISNDFTLGIPGKAFSFIQCHNKVAVAEASGL 250
           AHTKEFI +QMEKEI+KLR SRSA+S ADI+NDFT+GI G+ FSF  C NKV VAEASGL
Sbjct: 184 AHTKEFIRKQMEKEIEKLRASRSAVSTADIANDFTIGIEGEVFSFTHCSNKVTVAEASGL 243

Query: 251 TGEVSEVEQFIRENVK 266
           TGE  ++E FIRE +K
Sbjct: 244 TGETIQIEDFIREYIK 259

[Close]

BLAST of PI0006558 vs. TAIR 10
Match: AT2G18770.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 384.8 bits (987), Expect = 5.6e-107
Identity = 194/256 (75.78%), Postives = 222/256 (86.72%), Query Frame = 0


Query: 11  VEQLKVRMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLLARLFKRRKSNTILLSGL 70
           +E LK+  EQW +QGLEFV +IPP QLY  +GVLL  T+ LL  RLF+R KSNT+LLSGL
Sbjct: 4   LEDLKIVAEQWSKQGLEFVQKIPPPQLYTAIGVLLLATIWLLSIRLFRRTKSNTVLLSGL 63

Query: 71  SGSGKTILFYRLRDGSSHQGTVTSMEPNEGTFVLHSE-IAKKDKLKPVHLVDVPGHSRLR 130
           SGSGKT+LFY+LRDGSSHQG VTSMEPNEGTFVLH+E   KK K+KPVHL+DVPGHSRL 
Sbjct: 64  SGSGKTVLFYQLRDGSSHQGAVTSMEPNEGTFVLHNENNTKKGKVKPVHLIDVPGHSRLI 123

Query: 131 AKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVT 190
           +KL+++LP+AA VVFVVDAL+FLPN RAASEYLYDILTNASV+K K PVL+ CNKTDKVT
Sbjct: 124 SKLEEYLPRAAAVVFVVDALEFLPNIRAASEYLYDILTNASVIKNKTPVLLCCNKTDKVT 183

Query: 191 AHTKEFINRQMEKEIDKLRVSRSAISAADISNDFTLGIPGKAFSFIQCHNKVAVAEASGL 250
           AHTKEFI +QMEKEIDKLRVSRSAIS ADI+NDFTLGI G+ FSF  CHNKV VAEASGL
Sbjct: 184 AHTKEFIRKQMEKEIDKLRVSRSAISTADIANDFTLGIEGEVFSFSHCHNKVTVAEASGL 243

Query: 251 TGEVSEVEQFIRENVK 266
           TGE  +V++FIRE+VK
Sbjct: 244 TGETDQVQEFIREHVK 259

[Close]

BLAST of PI0006558 vs. TAIR 10
Match: AT5G67560.1 (ADP-ribosylation factor-like A1D )

HSP 1 Score: 48.1 bits (113), Expect = 1.2e-05
Identity = 45/156 (28.85%), Postives = 73/156 (46.79%), Query Frame = 0


Query: 45  LFTTLLLLLARLFKRRKSNTILLSGLSGSGKTILFYRLRDGSSHQGTVTSMEPNEGTFVL 104
           L+  LL  L  LF +++    L+ GL  +GKT L   +  G   +  + ++  N      
Sbjct: 3   LWDALLNWLRSLFFKQEMELSLI-GLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTK 62

Query: 105 HSEIAKKDKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYD 164
            S   K        L D+ G  R R+  + +    + +V+VVDA D   N   +   L+D
Sbjct: 63  GSVTIK--------LWDLGGQPRFRSMWERYCRSVSAIVYVVDAAD-PDNLSVSKSELHD 122

Query: 165 ILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM 201
           +L+  S+    IP+L+L NK DK  A +KE +  +M
Sbjct: 123 LLSKTSL--NGIPLLVLGNKIDKPGALSKEALTDEM 146

[Close]

BLAST of PI0006558 vs. TAIR 10
Match: AT2G15310.1 (ADP-ribosylation factor B1A )

HSP 1 Score: 44.7 bits (104), Expect = 1.4e-04
Identity = 42/138 (30.43%), Postives = 65/138 (47.10%), Query Frame = 0


Query: 53  LARLFKRRKSNTILLSGLSGSGKTILFYRLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKD 112
           +A+ F  +    IL+ GL GSGKT + Y+L+      G V +  P  G F L +   K  
Sbjct: 8   IAKRFLPKSKVRILMVGLDGSGKTTILYKLK-----LGEVVTTVPTIG-FNLETVEYKGI 67

Query: 113 KLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVV 172
                 + D+ G  ++R     +   A G++FVVD+ D      A +E L+ ILT+  + 
Sbjct: 68  NFT---VWDIGGQEKIRKLWRHYFQNAQGLIFVVDSSDSERLSEARNE-LHRILTDNEL- 127

Query: 173 KKKIPVLILCNKTDKVTA 191
            +   VL+  NK D   A
Sbjct: 128 -EGACVLVFANKQDSRNA 133

The following BLAST results are available for this feature:

BLAST of PI0006558 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54XX1	4.4e-24	33.50	Signal recognition particle receptor subunit beta OS=Dictyostelium discoideum OX...	[more]
Q4FZX7	3.2e-22	34.03	Signal recognition particle receptor subunit beta OS=Rattus norvegicus OX=10116 ...	[more]
P47758	4.2e-22	34.03	Signal recognition particle receptor subunit beta OS=Mus musculus OX=10090 GN=Sr...	[more]
Q9Y5M8	6.0e-21	34.73	Signal recognition particle receptor subunit beta OS=Homo sapiens OX=9606 GN=SRP...	[more]
P36057	3.1e-09	34.23	Signal recognition particle receptor subunit beta OS=Saccharomyces cerevisiae (s...	[more]

BLAST of PI0006558 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSA6	8.7e-140	97.37	Signal recognition particle receptor subunit beta OS=Cucumis sativus OX=3659 GN=...	[more]
E5GBI2	5.6e-139	96.99	Signal recognition particle receptor subunit beta OS=Cucumis melo subsp. melo OX...	[more]
A0A1S3BEG3	5.6e-139	96.99	Signal recognition particle receptor subunit beta OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1DE59	9.3e-134	92.83	Signal recognition particle receptor subunit beta OS=Momordica charantia OX=3673...	[more]
A0A6J1D1F7	2.1e-133	92.45	Signal recognition particle receptor subunit beta OS=Momordica charantia OX=3673...	[more]

BLAST of PI0006558 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135257.1	1.8e-139	97.37	signal recognition particle receptor subunit beta [Cucumis sativus] >KGN51789.1 ...	[more]
XP_008446189.1	1.2e-138	96.99	PREDICTED: signal recognition particle receptor subunit beta-like [Cucumis melo]...	[more]
XP_038892002.1	2.4e-136	94.36	signal recognition particle receptor subunit beta-like [Benincasa hispida]	[more]
XP_022151281.1	1.9e-133	92.83	signal recognition particle receptor subunit beta-like [Momordica charantia]	[more]
XP_022147102.1	4.3e-133	92.45	signal recognition particle receptor subunit beta-like isoform X1 [Momordica cha...	[more]

BLAST of PI0006558 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05670.2	3.0e-108	75.00	signal recognition particle binding	[more]
AT5G05670.1	3.0e-108	75.00	signal recognition particle binding	[more]
AT2G18770.1	5.6e-107	75.78	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G67560.1	1.2e-05	28.85	ADP-ribosylation factor-like A1D	[more]
AT2G15310.1	1.4e-04	30.43	ADP-ribosylation factor B1A	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 4..24
None	No IPR available	PANTHER	PTHR11485	TRANSFERRIN	coord: 5..265
None	No IPR available	PROSITE	PS51417	ARF	coord: 55..266 score: 9.312479
IPR019009	Signal recognition particle receptor, beta subunit	PFAM	PF09439	SRPRB	coord: 61..241 e-value: 3.2E-36 score: 124.5
IPR019009	Signal recognition particle receptor, beta subunit	PANTHER	PTHR11485:SF50	P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN	coord: 5..265
IPR019009	Signal recognition particle receptor, beta subunit	CDD	cd04105	SR_beta	coord: 63..262 e-value: 4.4616E-68 score: 207.559
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 57..265 e-value: 1.3E-60 score: 206.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 65..255

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0006558.1	PI0006558.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045047	protein targeting to ER
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005785	signal recognition particle receptor complex
molecular_function	GO:0005525	GTP binding