PI0006535 (gene) Melon (PI 482460) v1

Overview


Name	PI0006535
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Thioredoxin domain-containing protein
Location	chr03: 1560533 .. 1563393 (+)
RNA-Seq Expression	PI0006535
Synteny	PI0006535

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGAAACTGAAAGAAAAAACGAACTCAGAAAAGAAAAAGAAAAAAGAAAGGAGAATGGAGGCACCATCTCCAGAGCTAGTTTTGCTTTGTTAGCTGTTGCCATTTTCACATTCTTCTCTTTGGTTCCTACGAATTACCCAAAGGAATTCCAAGTTGCATCTCTTTTCTCAATGTGTGAAATTTCTGTGAGCTAATTTCCATCTATTGTAGGCGAAGCATCTTGAACTCCTGTCGGCCTCTCACTCACCATTTTGAGTACCCAGCTTCTGGAAGCTCAACGAGGTATTAGGTTTTCTTCGTTTCCATTTGATTTTTTTTGTCCTTAGGTATTGGATGTTATTGGGTTTAGAATTCTAAGCCCACTGGAATTCTTGAATTAAAATTCAAGTTAATCACTTCAATTTATTGAACAATGAAATTTATAGCGACGTTCAGTGGTAATCCCTTGTTCATGGTCACGTTTCGAGGAATTTTAGAGTAGTTAGGAGTTATTTGGGGAGCCAAGTTGGGTTCTTAAGTACAGAGTTAATATTAATATGTTGTGGTTAGAAGTGTGTGTAAGAGTTGTTTAGTTGGAGTTGAAAATATTACAGAGGGAAAGATGACAAAACAAAGTTTCTTAATAAATGTGTGAACACTGTTAAAGTGATGGAGCAGAGTTATTTGACACCTTCGTATGAAGATAGGCCAAACACTCCGGCAATATGACTTTTGTAATGTTTAGAATCACTATGAAATATGTGGTTAATTGTTTAAAATAAACATTAAATTTGTAAACATGTTTGAGAGTAATTTTAAACACAACAAAAGTAGGTTTACGAATCAACCTAAACATGGCTTGGATATGAACTTGAATTCATTGAACTGGCTCAAGTTTGGCGAGTTTCAGATATTCGCAGTTAACTTTGATACAGCAGGCAAAAAGAAAAGGAAAGTGGATAACCCTACAAAAGATTTTTTGCATTGTACTTTGCTCGTGCCACTTTATTCTATCAAGCTCTCAAGTTCATTATGTCACATGTCTGCTATGGCGTGCTCTGTCAGTATTTGGTAGAGACTAAGTACAGTATCAAACTTAAAATTCAATAATGTTGCCCCTTTTACCTTTTTGGTGTTACCTTTGTATTTTTTCATTTTCTTCTCAATGAAAGTTTGGTTATTCACTAAAAAACCTATATGGGATATTCACGTTTGACATCCGAATATTGGAAGGTAAGTTTATTATATTATGAAAATTAGTCGAATTGGATATAAGTTACCTAGACATTCATGAATATAGGGAAAAAGTATTCAGTGATTGATTTGAAACTTTTTGGGAGTGCAGAGACTGTCAATGTAACTATCAAAGTTTTGGGATTAAATTTAGTTTAATCCGACTTTTGTTGCACAAACTTTTTTTTTTTGTTAGATATTGCAGTCCTTTATGTTTTGTATTTTCATTTGCAGGGGTAAGGTGATAGTTTTTACTTTTAGATTAAAAGGAAAGAGGAAAGTTAAAGAATATAATGGGTTCAACACCCAAACAGCCTTTCTTTTGCTTCAAATGGCCATGGGACATAGACCCGAAAAATCGTTCTGACTGTTCGTTTGAGGGTCCTTGGTTGTTCAAATCATTGCAAAATGTGGGTGCCTTCGCTTTCAATTTTGTAAATAAAGTTTCAAAATCGCCTCCATGGATGACTTTTAAGCCATTGCAATTCAACGCCTTAACTGGTGGAAATAAGATATCTCAGTCTAGAAAGATGTTAACTCCTGAAGAGCAAGGGGAAGCAGAAAATAGAGCATTGGCAGCAGCATTAGCCAGTGGGAAAGAAGCCACCGTGATCGAGTTTTACTCGCCCAAATGTCTCCTTTGCAATTCCTTGCTTAATATTGTTATGGAGATGGAAGCAAGGAATTCAAATTGGCTTAGTATTGTGATGGCAGATGCAGAGAATGATAAATGGCTGCCTGAGGTGTTCAACTCTCCTCTTACCTCACATTATATGTCAACTGTGGCTTTAGGAATTCTAGTTAATTCTAAAAGTTGCATTCTTGGTGAATATATTATCATGGTTTATCATTTTCAGATGAGTCGATTAAGTATTCTTTAGCCATAATTTAGTAGGGGTTAATTTATGGTATAGAATTAGTGGTATTAACTTGATATATTGCAGTTTGAATCAATGCAGATCTGGTTGAAATTGCTGTATGCAACTATGAAACCTTAATAATGAAGCTAATTAGTCTGTATATCAACCATATGATATGTTTTTGCTTGTACAAAAAGTTGAATAGTAAATTATCCCAGGATTATTCTACAAGTCCACATATTGTCCTGCCCATTAAAAGCTTACATAGGATTAACCTATGATTCGTAATCTCATCTCAACCTTTTTCGACATTCATTTTGATAGTTCTGTTATTATTTTTCTTGGAAATTGAATGTATAAAAATATTTCCCGTTTGGTTGAATGCTGGGCTAGCACTGCTCCTGATGATCTTGCTTGCATCTTTATGCAGCTTCTTCATTATGACATTAGATATGTTCCTTGCTTTGTGTTGCTGGACAAACACGGTAAGGCGCTAGCAAAGACGGGTATTCCTAGTAGTCGGCTTCATGTAATTGCAGGACTTTCTCATCTTATCAAACTGAAAGCGCCCAAGAGCACTCCCTGAATCAGATAATAAGCCACCATGTTGAATAAATGGATTTGTGAAAGCTGTGATTTAGATGGCATTGGTAAGAATTGTAGTTAATTCGAAAGCAGAACTTGTTCTCTTTTGAAATTGCACACCACAGTTTAAATTTAGAAATTTACTCTAATTTCACTTGCCATGAAATCTGAGTTTACATTTAGTAAAAATGGTTTTGATTAAAA

mRNA sequence

CAGAAACTGAAAGAAAAAACGAACTCAGAAAAGAAAAAGAAAAAAGAAAGGAGAATGGAGGCACCATCTCCAGAGCTAGTTTTGCTTTGTTAGCTGTTGCCATTTTCACATTCTTCTCTTTGGTTCCTACGAATTACCCAAAGGAATTCCAAGTTGCATCTCTTTTCTCAATGTGTGAAATTTCTGTGAGCTAATTTCCATCTATTGTAGGCGAAGCATCTTGAACTCCTGTCGGCCTCTCACTCACCATTTTGAGTACCCAGCTTCTGGAAGCTCAACGAGGGGTAAGGTGATAGTTTTTACTTTTAGATTAAAAGGAAAGAGGAAAGTTAAAGAATATAATGGGTTCAACACCCAAACAGCCTTTCTTTTGCTTCAAATGGCCATGGGACATAGACCCGAAAAATCGTTCTGACTGTTCGTTTGAGGGTCCTTGGTTGTTCAAATCATTGCAAAATGTGGGTGCCTTCGCTTTCAATTTTGTAAATAAAGTTTCAAAATCGCCTCCATGGATGACTTTTAAGCCATTGCAATTCAACGCCTTAACTGGTGGAAATAAGATATCTCAGTCTAGAAAGATGTTAACTCCTGAAGAGCAAGGGGAAGCAGAAAATAGAGCATTGGCAGCAGCATTAGCCAGTGGGAAAGAAGCCACCGTGATCGAGTTTTACTCGCCCAAATGTCTCCTTTGCAATTCCTTGCTTAATATTGTTATGGAGATGGAAGCAAGGAATTCAAATTGGCTTAGTATTGTGATGGCAGATGCAGAGAATGATAAATGGCTGCCTGAGCTTCTTCATTATGACATTAGATATGTTCCTTGCTTTGTGTTGCTGGACAAACACGGTAAGGCGCTAGCAAAGACGGGTATTCCTAGTAGTCGGCTTCATGTAATTGCAGGACTTTCTCATCTTATCAAACTGAAAGCGCCCAAGAGCACTCCCTGAATCAGATAATAAGCCACCATGTTGAATAAATGGATTTGTGAAAGCTGTGATTTAGATGGCATTGGTAAGAATTGTAGTTAATTCGAAAGCAGAACTTGTTCTCTTTTGAAATTGCACACCACAGTTTAAATTTAGAAATTTACTCTAATTTCACTTGCCATGAAATCTGAGTTTACATTTAGTAAAAATGGTTTTGATTAAAA

Coding sequence (CDS)

ATGGGTTCAACACCCAAACAGCCTTTCTTTTGCTTCAAATGGCCATGGGACATAGACCCGAAAAATCGTTCTGACTGTTCGTTTGAGGGTCCTTGGTTGTTCAAATCATTGCAAAATGTGGGTGCCTTCGCTTTCAATTTTGTAAATAAAGTTTCAAAATCGCCTCCATGGATGACTTTTAAGCCATTGCAATTCAACGCCTTAACTGGTGGAAATAAGATATCTCAGTCTAGAAAGATGTTAACTCCTGAAGAGCAAGGGGAAGCAGAAAATAGAGCATTGGCAGCAGCATTAGCCAGTGGGAAAGAAGCCACCGTGATCGAGTTTTACTCGCCCAAATGTCTCCTTTGCAATTCCTTGCTTAATATTGTTATGGAGATGGAAGCAAGGAATTCAAATTGGCTTAGTATTGTGATGGCAGATGCAGAGAATGATAAATGGCTGCCTGAGCTTCTTCATTATGACATTAGATATGTTCCTTGCTTTGTGTTGCTGGACAAACACGGTAAGGCGCTAGCAAAGACGGGTATTCCTAGTAGTCGGCTTCATGTAATTGCAGGACTTTCTCATCTTATCAAACTGAAAGCGCCCAAGAGCACTCCCTGA

Protein sequence

MGSTPKQPFFCFKWPWDIDPKNRSDCSFEGPWLFKSLQNVGAFAFNFVNKVSKSPPWMTFKPLQFNALTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATVIEFYSPKCLLCNSLLNIVMEMEARNSNWLSIVMADAENDKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIPSSRLHVIAGLSHLIKLKAPKSTP

Homology

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BLAST of PI0006535 vs. ExPASy Swiss-Prot
Match: P73920 (Thiol:disulfide interchange protein TxlA homolog OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=txlA PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.5e-08
Identity = 29/82 (35.37%), Postives = 50/82 (60.98%), Query Frame = 0


Query: 94  LAAALASGKEATVIEFYSPKCLLCNSLLNIVMEMEARNSNWLSIVMADAENDKWLPELLH 153
           LA AL +G+  T++EFY+  C  C ++   + E++      ++  M + +N+KWLPE+L 
Sbjct: 45  LATALDNGR-PTLVEFYADWCTSCQAMAPDLAELKKNYGGSVNFAMLNVDNNKWLPEVLR 104

Query: 154 YDIRYVPCFVLLDKHGKALAKT 176
           Y +  +P FV LD  G A+A++
Sbjct: 105 YRVDGIPHFVYLDDTGTAIAES 125

[Close]

BLAST of PI0006535 vs. ExPASy Swiss-Prot
Match: P35088 (Thiol:disulfide interchange protein TxlA OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=txlA PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.4e-06
Identity = 23/65 (35.38%), Postives = 40/65 (61.54%), Query Frame = 0


Query: 106 VIEFYSPKCLLCNSLLNIVMEMEARNSNWLSIVMADAENDKWLPELLHYDIRYVPCFVLL 165
           ++EFY+  C  C ++   +  ++   S+ L  VM + +NDKWLPE+L Y++  +P FV L
Sbjct: 61  LLEFYADWCTSCQAMAGRIAALKQDYSDRLDFVMLNIDNDKWLPEVLDYNVDGIPQFVYL 120

Query: 166 DKHGK 171
           +  G+
Sbjct: 121 NGQGQ 125

[Close]

BLAST of PI0006535 vs. ExPASy TrEMBL
Match: A0A1S3BAS7 (uncharacterized protein LOC103487919 OS=Cucumis melo OX=3656 GN=LOC103487919 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.7e-108
Identity = 192/202 (95.05%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 1   MGSTPKQPFFCFKWPWDIDPKNRSDCSFEGPWLFKSLQNVGAFAFNFVNKVSK-SPPWMT 60
           MGSTPKQP FCFKWPWD+D KNRSDCSFEGPWLFKSLQNVG FAFNFVNKVSK SPPWMT
Sbjct: 1   MGSTPKQPLFCFKWPWDVDSKNRSDCSFEGPWLFKSLQNVGGFAFNFVNKVSKSSPPWMT 60

Query: 61  FKPLQFNALTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATVIEFYSPKCLLCNS 120
           FKPLQFN LTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATVIEFYSPKCLLCNS
Sbjct: 61  FKPLQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATVIEFYSPKCLLCNS 120

Query: 121 LLNIVMEMEARNSNWLSIVMADAENDKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIPS 180
           LLNIVME+EARNS+WL+IVMADAENDKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIPS
Sbjct: 121 LLNIVMEIEARNSDWLNIVMADAENDKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIPS 180

Query: 181 SRLHVIAGLSHLIKLKAPKSTP 202
           SRLHVIAGLSHLIKLK+PKSTP
Sbjct: 181 SRLHVIAGLSHLIKLKSPKSTP 202

[Close]

BLAST of PI0006535 vs. ExPASy TrEMBL
Match: A0A5A7TE38 (Thioredoxin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold45884G00010 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 4.3e-107
Identity = 190/202 (94.06%), Postives = 196/202 (97.03%), Query Frame = 0


Query: 1   MGSTPKQPFFCFKWPWDIDPKNRSDCSFEGPWLFKSLQNVGAFAFNFVNKVSK-SPPWMT 60
           MGSTPKQP FCFKWPWD+D +NRSDCSFEGPWLFKSLQNVG FAFNFVNKVSK SP WMT
Sbjct: 1   MGSTPKQPLFCFKWPWDVDSENRSDCSFEGPWLFKSLQNVGGFAFNFVNKVSKSSPSWMT 60

Query: 61  FKPLQFNALTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATVIEFYSPKCLLCNS 120
           FKPLQFN LTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATVIEFYSPKCLLCNS
Sbjct: 61  FKPLQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATVIEFYSPKCLLCNS 120

Query: 121 LLNIVMEMEARNSNWLSIVMADAENDKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIPS 180
           LLNIVME+EARNS+WL+IVMADAENDKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIPS
Sbjct: 121 LLNIVMEIEARNSDWLNIVMADAENDKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIPS 180

Query: 181 SRLHVIAGLSHLIKLKAPKSTP 202
           SRLHVIAGLSHLIKLK+PKSTP
Sbjct: 181 SRLHVIAGLSHLIKLKSPKSTP 202

[Close]

BLAST of PI0006535 vs. ExPASy TrEMBL
Match: A0A0A0LRE2 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G360630 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 3.1e-105
Identity = 185/202 (91.58%), Postives = 193/202 (95.54%), Query Frame = 0


Query: 1   MGSTPKQPFFCFKWPWDIDPKNRSDCSFEGPWLFKSLQNVGAFAFNFVNKVSK-SPPWMT 60
           MGSTPKQPFFCFKWPWD+DPKNRSDCSFE PWLFKSLQNVG FAF+FVNK SK SPPWMT
Sbjct: 1   MGSTPKQPFFCFKWPWDVDPKNRSDCSFESPWLFKSLQNVGGFAFDFVNKASKSSPPWMT 60

Query: 61  FKPLQFNALTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATVIEFYSPKCLLCNS 120
           FK LQFN LTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEAT+IEFYSPKCLLCNS
Sbjct: 61  FKSLQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATIIEFYSPKCLLCNS 120

Query: 121 LLNIVMEMEARNSNWLSIVMADAENDKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIPS 180
           LLNIV EMEARNS+WL+IVMADAENDKWLPELLHYDI YVPCFVLLDKHGKALAKT +PS
Sbjct: 121 LLNIVTEMEARNSDWLNIVMADAENDKWLPELLHYDITYVPCFVLLDKHGKALAKTSLPS 180

Query: 181 SRLHVIAGLSHLIKLKAPKSTP 202
           SRLHVIAGLSHLIK+K+PKSTP
Sbjct: 181 SRLHVIAGLSHLIKMKSPKSTP 202

[Close]

BLAST of PI0006535 vs. ExPASy TrEMBL
Match: A0A6J1CS67 (uncharacterized protein LOC111014082 OS=Momordica charantia OX=3673 GN=LOC111014082 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.5e-96
Identity = 174/201 (86.57%), Postives = 183/201 (91.04%), Query Frame = 0


Query: 1   MGSTPKQPFFCFKWPWDIDPKNRSDCSFEGPWLFKSLQNVGAFAFNFVNKVSK-SPPWM- 60
           MGSTPKQPFFCFKWPWD DPKN  DCSFEGPWLFKSLQNVGAFAFNFVNKVSK SPPW+ 
Sbjct: 1   MGSTPKQPFFCFKWPWDADPKNPFDCSFEGPWLFKSLQNVGAFAFNFVNKVSKSSPPWIN 60

Query: 61  TFKPLQFNALTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATVIEFYSPKCLLCN 120
            FKPL F A  GGNK S  RK LTPEEQGEAE+RA A+ALASGKEATVIEFYSPKC LCN
Sbjct: 61  AFKPLHFEASNGGNKKSLPRKKLTPEEQGEAEHRAFASALASGKEATVIEFYSPKCRLCN 120

Query: 121 SLLNIVMEMEARNSNWLSIVMADAENDKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIP 180
           SLL++VMEMEARNS+WLSIVMADAEN+KWLPELLHYDIRYVPCFVLLDKHGKALAKTGIP
Sbjct: 121 SLLDVVMEMEARNSDWLSIVMADAENEKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIP 180

Query: 181 SSRLHVIAGLSHLIKLKAPKS 200
           SSRLHVIAGLSHL+ LK P+S
Sbjct: 181 SSRLHVIAGLSHLLNLKRPRS 201

[Close]

BLAST of PI0006535 vs. ExPASy TrEMBL
Match: A0A6J1KP92 (uncharacterized protein LOC111496027 OS=Cucurbita maxima OX=3661 GN=LOC111496027 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.4e-88
Identity = 163/203 (80.30%), Postives = 177/203 (87.19%), Query Frame = 0


Query: 1   MGSTPKQPFFCFKWPWDIDPKNRSDCSFEGPWLFKSLQNVGAFAFNFVNKVSK-SPPWM- 60
           M STPKQP FCFKWPWDI+PKN SDCSFEGPWLFKSLQNVG FA NF+N+VSK SPPW+ 
Sbjct: 1   MRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVN 60

Query: 61  TFKPLQFNALTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATVIEFYSPKCLLCN 120
            FKPL F+    GNKIS+SRK L+PEEQGEAENRA AAALA GKEATVIEFYSPKC LC+
Sbjct: 61  AFKPLSFD----GNKISKSRKKLSPEEQGEAENRAFAAALACGKEATVIEFYSPKCPLCS 120

Query: 121 SLLNIVMEMEARNSNWLSIVMADAENDKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIP 180
           SLL  V +MEARNS WL+IVMADAENDKWLPE+LHYDI YVPCFV+LDK GKALAKTGIP
Sbjct: 121 SLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKTGIP 180

Query: 181 SSRLHVIAGLSHLIKLKAPKSTP 202
           SSRLHVIAGLSHL+KLK P + P
Sbjct: 181 SSRLHVIAGLSHLLKLKRPTTLP 199

[Close]

BLAST of PI0006535 vs. NCBI nr
Match: XP_008444648.1 (PREDICTED: uncharacterized protein LOC103487919 [Cucumis melo])

HSP 1 Score: 401.7 bits (1031), Expect = 3.6e-108
Identity = 192/202 (95.05%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 1   MGSTPKQPFFCFKWPWDIDPKNRSDCSFEGPWLFKSLQNVGAFAFNFVNKVSK-SPPWMT 60
           MGSTPKQP FCFKWPWD+D KNRSDCSFEGPWLFKSLQNVG FAFNFVNKVSK SPPWMT
Sbjct: 1   MGSTPKQPLFCFKWPWDVDSKNRSDCSFEGPWLFKSLQNVGGFAFNFVNKVSKSSPPWMT 60

Query: 61  FKPLQFNALTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATVIEFYSPKCLLCNS 120
           FKPLQFN LTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATVIEFYSPKCLLCNS
Sbjct: 61  FKPLQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATVIEFYSPKCLLCNS 120

Query: 121 LLNIVMEMEARNSNWLSIVMADAENDKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIPS 180
           LLNIVME+EARNS+WL+IVMADAENDKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIPS
Sbjct: 121 LLNIVMEIEARNSDWLNIVMADAENDKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIPS 180

Query: 181 SRLHVIAGLSHLIKLKAPKSTP 202
           SRLHVIAGLSHLIKLK+PKSTP
Sbjct: 181 SRLHVIAGLSHLIKLKSPKSTP 202

[Close]

BLAST of PI0006535 vs. NCBI nr
Match: KAA0041672.1 (thioredoxin-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 397.1 bits (1019), Expect = 8.9e-107
Identity = 190/202 (94.06%), Postives = 196/202 (97.03%), Query Frame = 0


Query: 1   MGSTPKQPFFCFKWPWDIDPKNRSDCSFEGPWLFKSLQNVGAFAFNFVNKVSK-SPPWMT 60
           MGSTPKQP FCFKWPWD+D +NRSDCSFEGPWLFKSLQNVG FAFNFVNKVSK SP WMT
Sbjct: 1   MGSTPKQPLFCFKWPWDVDSENRSDCSFEGPWLFKSLQNVGGFAFNFVNKVSKSSPSWMT 60

Query: 61  FKPLQFNALTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATVIEFYSPKCLLCNS 120
           FKPLQFN LTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATVIEFYSPKCLLCNS
Sbjct: 61  FKPLQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATVIEFYSPKCLLCNS 120

Query: 121 LLNIVMEMEARNSNWLSIVMADAENDKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIPS 180
           LLNIVME+EARNS+WL+IVMADAENDKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIPS
Sbjct: 121 LLNIVMEIEARNSDWLNIVMADAENDKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIPS 180

Query: 181 SRLHVIAGLSHLIKLKAPKSTP 202
           SRLHVIAGLSHLIKLK+PKSTP
Sbjct: 181 SRLHVIAGLSHLIKLKSPKSTP 202

[Close]

BLAST of PI0006535 vs. NCBI nr
Match: XP_004152726.1 (uncharacterized protein LOC101203280 [Cucumis sativus] >KGN62546.1 hypothetical protein Csa_022374 [Cucumis sativus])

HSP 1 Score: 391.0 bits (1003), Expect = 6.4e-105
Identity = 185/202 (91.58%), Postives = 193/202 (95.54%), Query Frame = 0


Query: 1   MGSTPKQPFFCFKWPWDIDPKNRSDCSFEGPWLFKSLQNVGAFAFNFVNKVSK-SPPWMT 60
           MGSTPKQPFFCFKWPWD+DPKNRSDCSFE PWLFKSLQNVG FAF+FVNK SK SPPWMT
Sbjct: 1   MGSTPKQPFFCFKWPWDVDPKNRSDCSFESPWLFKSLQNVGGFAFDFVNKASKSSPPWMT 60

Query: 61  FKPLQFNALTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATVIEFYSPKCLLCNS 120
           FK LQFN LTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEAT+IEFYSPKCLLCNS
Sbjct: 61  FKSLQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATIIEFYSPKCLLCNS 120

Query: 121 LLNIVMEMEARNSNWLSIVMADAENDKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIPS 180
           LLNIV EMEARNS+WL+IVMADAENDKWLPELLHYDI YVPCFVLLDKHGKALAKT +PS
Sbjct: 121 LLNIVTEMEARNSDWLNIVMADAENDKWLPELLHYDITYVPCFVLLDKHGKALAKTSLPS 180

Query: 181 SRLHVIAGLSHLIKLKAPKSTP 202
           SRLHVIAGLSHLIK+K+PKSTP
Sbjct: 181 SRLHVIAGLSHLIKMKSPKSTP 202

[Close]

BLAST of PI0006535 vs. NCBI nr
Match: XP_038885736.1 (uncharacterized protein LOC120076025 [Benincasa hispida] >XP_038885737.1 uncharacterized protein LOC120076025 [Benincasa hispida] >XP_038885738.1 uncharacterized protein LOC120076025 [Benincasa hispida])

HSP 1 Score: 374.8 bits (961), Expect = 4.7e-100
Identity = 182/203 (89.66%), Postives = 189/203 (93.10%), Query Frame = 0


Query: 1   MGSTPKQPFFCFKWPWDIDPKNRSDCSFEGPWLFKSLQNVGAFAFNFVNKVSK-SPPWM- 60
           MGSTPKQPFFC KWPWD+DPKN  DCSFEGPWLFKSLQNVG FAFNFVNKVSK SPPW+ 
Sbjct: 1   MGSTPKQPFFCLKWPWDVDPKNPFDCSFEGPWLFKSLQNVGTFAFNFVNKVSKSSPPWIN 60

Query: 61  TFKPLQFNALTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATVIEFYSPKCLLCN 120
           TFKPLQ +A TGGN ISQSRKMLTPEEQGEAENRA AAALASGKEATVIEFYSPKC LCN
Sbjct: 61  TFKPLQLDASTGGNNISQSRKMLTPEEQGEAENRAFAAALASGKEATVIEFYSPKCFLCN 120

Query: 121 SLLNIVMEMEARNSNWLSIVMADAENDKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIP 180
           SLLN VMEMEARNS+WL+IVMADAEN KWLPE+LHYDIRYVPCFVLLDKHGKALAKTGIP
Sbjct: 121 SLLNTVMEMEARNSDWLNIVMADAENYKWLPEVLHYDIRYVPCFVLLDKHGKALAKTGIP 180

Query: 181 SSRLHVIAGLSHLIKLKAPKSTP 202
           SSRL VIAGLSHLIKLKAPK+TP
Sbjct: 181 SSRLLVIAGLSHLIKLKAPKNTP 203

[Close]

BLAST of PI0006535 vs. NCBI nr
Match: XP_022144394.1 (uncharacterized protein LOC111014082 [Momordica charantia])

HSP 1 Score: 360.5 bits (924), Expect = 9.2e-96
Identity = 174/201 (86.57%), Postives = 183/201 (91.04%), Query Frame = 0


Query: 1   MGSTPKQPFFCFKWPWDIDPKNRSDCSFEGPWLFKSLQNVGAFAFNFVNKVSK-SPPWM- 60
           MGSTPKQPFFCFKWPWD DPKN  DCSFEGPWLFKSLQNVGAFAFNFVNKVSK SPPW+ 
Sbjct: 1   MGSTPKQPFFCFKWPWDADPKNPFDCSFEGPWLFKSLQNVGAFAFNFVNKVSKSSPPWIN 60

Query: 61  TFKPLQFNALTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATVIEFYSPKCLLCN 120
            FKPL F A  GGNK S  RK LTPEEQGEAE+RA A+ALASGKEATVIEFYSPKC LCN
Sbjct: 61  AFKPLHFEASNGGNKKSLPRKKLTPEEQGEAEHRAFASALASGKEATVIEFYSPKCRLCN 120

Query: 121 SLLNIVMEMEARNSNWLSIVMADAENDKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIP 180
           SLL++VMEMEARNS+WLSIVMADAEN+KWLPELLHYDIRYVPCFVLLDKHGKALAKTGIP
Sbjct: 121 SLLDVVMEMEARNSDWLSIVMADAENEKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIP 180

Query: 181 SSRLHVIAGLSHLIKLKAPKS 200
           SSRLHVIAGLSHL+ LK P+S
Sbjct: 181 SSRLHVIAGLSHLLNLKRPRS 201

[Close]

BLAST of PI0006535 vs. TAIR 10
Match: AT5G06430.1 (Thioredoxin superfamily protein )

HSP 1 Score: 247.3 bits (630), Expect = 1.1e-65
Identity = 121/200 (60.50%), Postives = 147/200 (73.50%), Query Frame = 0


Query: 3   STPKQPFFCFKWPWDID--PKNRSD-CSFEGPWLFKSLQNVGAFAFNFVNKVSKSPPWMT 62
           ST K PFFC KWPWD +  PK+ S  C F+GPWLF+S+Q +G+ A + +    ++P    
Sbjct: 11  STSKDPFFCLKWPWDSNKQPKSSSSVCDFQGPWLFRSMQTIGSIALSSLTSFGQNP---N 70

Query: 63  FKPLQFNALTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATVIEFYSPKCLLCNS 122
           F+P               +K L+  EQGEAE RA AAALAS KEATV+EFYS KC LCNS
Sbjct: 71  FRP--------------KKKPLSSSEQGEAEQRAFAAALASQKEATVLEFYSHKCRLCNS 130

Query: 123 LLNIVMEMEARNSNWLSIVMADAENDKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIPS 182
           LL  V+E+E RNSNWLSI MADAEN+KW PELLHYD++YVPCFVLLDK+G+ALAKTG+PS
Sbjct: 131 LLKFVLEVEKRNSNWLSITMADAENEKWFPELLHYDVKYVPCFVLLDKNGQALAKTGVPS 190

Query: 183 SRLHVIAGLSHLIKLKAPKS 200
           SR HVIAG+SHL+K+K P S
Sbjct: 191 SRAHVIAGISHLLKMKRPPS 193

The following BLAST results are available for this feature:

BLAST of PI0006535 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P73920	1.5e-08	35.37	Thiol:disulfide interchange protein TxlA homolog OS=Synechocystis sp. (strain PC...	[more]
P35088	1.4e-06	35.38	Thiol:disulfide interchange protein TxlA OS=Synechococcus elongatus (strain PCC ...	[more]

BLAST of PI0006535 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BAS7	1.7e-108	95.05	uncharacterized protein LOC103487919 OS=Cucumis melo OX=3656 GN=LOC103487919 PE=...	[more]
A0A5A7TE38	4.3e-107	94.06	Thioredoxin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A0A0LRE2	3.1e-105	91.58	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G360630...	[more]
A0A6J1CS67	4.5e-96	86.57	uncharacterized protein LOC111014082 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1KP92	3.4e-88	80.30	uncharacterized protein LOC111496027 OS=Cucurbita maxima OX=3661 GN=LOC111496027...	[more]

BLAST of PI0006535 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444648.1	3.6e-108	95.05	PREDICTED: uncharacterized protein LOC103487919 [Cucumis melo]	[more]
KAA0041672.1	8.9e-107	94.06	thioredoxin-like protein [Cucumis melo var. makuwa]	[more]
XP_004152726.1	6.4e-105	91.58	uncharacterized protein LOC101203280 [Cucumis sativus] >KGN62546.1 hypothetical ...	[more]
XP_038885736.1	4.7e-100	89.66	uncharacterized protein LOC120076025 [Benincasa hispida] >XP_038885737.1 unchara...	[more]
XP_022144394.1	9.2e-96	86.57	uncharacterized protein LOC111014082 [Momordica charantia]	[more]

BLAST of PI0006535 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06430.1	1.1e-65	60.50	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 94..172 e-value: 5.7E-7 score: 29.5
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 82..187 e-value: 6.5E-9 score: 37.5
None	No IPR available	PANTHER	PTHR43601:SF11	EXPRESSED PROTEIN	coord: 1..198
None	No IPR available	PANTHER	PTHR43601	THIOREDOXIN, MITOCHONDRIAL	coord: 1..198
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 92..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0006535.1	PI0006535.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0006396	RNA processing
cellular_component	GO:0009507	chloroplast