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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCCTATGACTGCCAAAACATAAATATGTCAAATCTTTCTTTCAGATGGAAGAAGTTTGTCTTAATAGTGAGCCTATCTTTGATGAATGTGACGAATATGAGGTGGATGGTGATGGTTCCTTTGTGGACAATGATGATGAATCCGGGGAAGCACAGTCAAGGAAGAATCCTCCACTACCAACTGTGGGTTTGGAATTTAATTCTTTCGATGAGGCTTATGACTTTTATAATGTTTATGCTAAGAATGTGGGCTTTGGCATCAGAGTCAGTAATTCATGGTTTCGATCTAAGAAAAAAGAACGATATAGAGCTAAACTTAGCTGCAGCAGTGCAGGATTCAAGAAAAAGAGTGAAGCTAACAATCCAAGGCCAGAAACTAGGACTGGTTGTCCTGCAATGA mRNA sequence ATGGCCTATGACTGCCAAAACATAAATATGTCAAATCTTTCTTTCAGATGGAAGAAGTTTGTCTTAATAGTGAGCCTATCTTTGATGAATGTGACGAATATGAGGTGGATGGTGATGGTTCCTTTGTGGACAATGATGATGAATCCGGGGAAGCACAGTCAAGGAAGAATCCTCCACTACCAACTGTGGGTTTGGAATTTAATTCTTTCGATGAGGCTTATGACTTTTATAATGTTTATGCTAAGAATGTGGGCTTTGGCATCAGAGTCAGTAATTCATGGTTTCGATCTAAGAAAAAAGAACGATATAGAGCTAAACTTAGCTGCAGCAGTGCAGGATTCAAGAAAAAGAGTGAAGCTAACAATCCAAGGCCAGAAACTAGGACTGGTTGTCCTGCAATGA Coding sequence (CDS) ATGGCCTATGACTGCCAAAACATAAATATGTCAAATCTTTCTTTCAGATGGAAGAAGTTTGTCTTAATAGTGAGCCTATCTTTGATGAATGTGACGAATATGAGGTGGATGGTGATGGTTCCTTTGTGGACAATGATGATGAATCCGGGGAAGCACAGTCAAGGAAGAATCCTCCACTACCAACTGTGGGTTTGGAATTTAATTCTTTCGATGAGGCTTATGACTTTTATAATGTTTATGCTAAGAATGTGGGCTTTGGCATCAGAGTCAGTAATTCATGGTTTCGATCTAAGAAAAAAGAACGATATAGAGCTAAACTTAGCTGCAGCAGTGCAGGATTCAAGAAAAAGAGTGAAGCTAACAATCCAAGGCCAGAAACTAGGACTGGTTGTCCTGCAATGA Protein sequence MAYDCQNINMSNLSFRWKKFVLIVSLSLMNVTNMRWMVMVPLWTMMMNPGKHSQGRILHYQLWVWNLILSMRLMTFIMFMLRMWALASESVIHGFDLRKKNDIELNLAAAVQDSRKRVKLTIQGQKLGLVVLQ
Homology
BLAST of PI0006296 vs. ExPASy TrEMBL
Match: A0A0A0LDN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G876570 PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 1.8e-61 Identity = 126/133 (94.74%), Postives = 129/133 (96.99%), Query Frame = 0 Query: 1 MAYDCQNINMSNLSFRWKKFVLIVSLSLMNVTNMRWMVMVPLWTMMMNPGKHSQGRILHY 60 MAYDCQNINMSNLSFRW+KFVLIVSLSLMNVTNMRWMVM+PLWT M NPGKHSQGRILH+ Sbjct: 1 MAYDCQNINMSNLSFRWRKFVLIVSLSLMNVTNMRWMVMIPLWT-MTNPGKHSQGRILHF 60
Query: 61 QLWVWNLILSMRLMTFIMFMLRMWALASESVIHGFDLRKKNDIELNLAAAVQDSRKRVKL 120 QLWVWNLILSMRLMTF MFMLRMWALASESVIHGF LRKKNDIELNLAAAVQDSRKRVKL Sbjct: 61 QLWVWNLILSMRLMTFTMFMLRMWALASESVIHGFVLRKKNDIELNLAAAVQDSRKRVKL 120
Query: 121 TIQGQKLGLVVLQ 134 TIQGQKLGLVVLQ Sbjct: 121 TIQGQKLGLVVLQ 132
BLAST of PI0006296 vs. NCBI nr
Match: KAG7024450.1 (hypothetical protein SDJN02_13265 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 85.9 bits (211), Expect = 2.9e-13 Identity = 45/64 (70.31%), Postives = 51/64 (79.69%), Query Frame = 0 Query: 47 MNPGKHSQGRILHYQLWVWNLILSMRLMTFIMFMLRMWALASESVIHGFDLRKKNDIELN 106 MN KHSQ RI H QLWV N+IL MR TFIM MLR WALA+ES IHGFDLR+K+DIEL+ Sbjct: 1 MNLWKHSQRRIFHGQLWVRNMILLMRHTTFIMLMLRYWALAAESAIHGFDLREKSDIELH 60
Query: 107 LAAA 111 L+ A Sbjct: 61 LSFA 64
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LDN7 | 1.8e-61 | 94.74 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G876570 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KAG7024450.1 | 2.9e-13 | 70.31 | hypothetical protein SDJN02_13265 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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