PI0006283 (gene) Melon (PI 482460) v1

Overview
NamePI0006283
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr07: 2161015 .. 2161684 (-)
RNA-Seq ExpressionPI0006283
SyntenyPI0006283
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCATCGCATTTACTTCTCTTGTACCACAATGACCATCTCAAAAGGAATCGTGTTAATCTTTATCGTCATTTTCTTGATTAGCATCGACACGATTGAGATAACAAATGCAACGAGAATTATGCATTTTGACAAGAAGAAACTTAACATCGATGCATCTCTAATAAATCTTGTTGGTGCTCAACGTCCTGGAGGTTGTAATCCCATCAGTCGTTGCAGAGGAATTAGTATCAAAGATGAGATTATCAAGGACATTAAGAATAGGAGGGTTAAAAGAAAATCCATCTCAGAGCATAATTATTAATTGAGTTTTTTTTTTGTCATAATTATTAATTGAGATTCATCATATATATATATATATTTTTCAACCATATGATTATTTTATTTTAGAACTTTTATTTCATTCGTTCTTTTAAGAAGTTATATAAATGTATATATGGTTTCACGCGGTGACAAATGGAAACAACATTCTTAATATGACTTTTTTATAAAGCACCAAACATCCTAGAAGGAGATGATTTTATTAAGAATCCAACATTCTCGAACAATATGTTTTATATTTTATAATATCACAAAAGAAGGGATTTAGTCTGAATAAATTCATTTTTAAAACTTTCAAATTGAATTCAACCATCAAACCAAATAATGGTTCATCTACAAATTTAACATGTA

mRNA sequence

CTCATCGCATTTACTTCTCTTGTACCACAATGACCATCTCAAAAGGAATCGTGTTAATCTTTATCGTCATTTTCTTGATTAGCATCGACACGATTGAGATAACAAATGCAACGAGAATTATGCATTTTGACAAGAAGAAACTTAACATCGATGCATCTCTAATAAATCTTGTTGGTGCTCAACGTCCTGGAGGTTGTAATCCCATCAGTCGTTGCAGAGGAATTAGTATCAAAGATGAGATTATCAAGGACATTAAGAATAGGAGGGTTAAAAGAAAATCCATCTCAGAGCATAATTATTAATTGAGTTTTTTTTTTGTCATAATTATTAATTGAGATTCATCATATATATATATATATTTTTCAACCATATGATTATTTTATTTTAGAACTTTTATTTCATTCGTTCTTTTAAGAAGTTATATAAATGTATATATGGTTTCACGCGGTGACAAATGGAAACAACATTCTTAATATGACTTTTTTATAAAGCACCAAACATCCTAGAAGGAGATGATTTTATTAAGAATCCAACATTCTCGAACAATATGTTTTATATTTTATAATATCACAAAAGAAGGGATTTAGTCTGAATAAATTCATTTTTAAAACTTTCAAATTGAATTCAACCATCAAACCAAATAATGGTTCATCTACAAATTTAACATGTA

Coding sequence (CDS)

ATGACCATCTCAAAAGGAATCGTGTTAATCTTTATCGTCATTTTCTTGATTAGCATCGACACGATTGAGATAACAAATGCAACGAGAATTATGCATTTTGACAAGAAGAAACTTAACATCGATGCATCTCTAATAAATCTTGTTGGTGCTCAACGTCCTGGAGGTTGTAATCCCATCAGTCGTTGCAGAGGAATTAGTATCAAAGATGAGATTATCAAGGACATTAAGAATAGGAGGGTTAAAAGAAAATCCATCTCAGAGCATAATTATTAA

Protein sequence

MTISKGIVLIFIVIFLISIDTIEITNATRIMHFDKKKLNIDASLINLVGAQRPGGCNPISRCRGISIKDEIIKDIKNRRVKRKSISEHNY
Homology
[Close]
BLAST of PI0006283 vs. NCBI nr
Match: KGN53002.2 (hypothetical protein Csa_014928 [Cucumis sativus])

HSP 1 Score: 80.5 bits (197), Expect = 8.2e-12
Identity = 45/64 (70.31%), Postives = 49/64 (76.56%), Query Frame = 0 

Query: 22  IEITNATRIMHFDKKKLNIDASLINLVGAQRPGGCNPISRCRGISIKDEIIKDIKNR-RV 81
           I+ITNA R +  DKKKL+ DASLIN  G    GGCNPISRCRGI IKDEII+DIK R R 
Sbjct: 665 IDITNAARKVPLDKKKLDDDASLINTQGV---GGCNPISRCRGIGIKDEIIRDIKRRGRT 724

Query: 82  KRKS 85
           KRKS
Sbjct: 725 KRKS 725

The following BLAST results are available for this feature:
BLAST of PI0006283 vs.
Match NameE-valueIdentityDescription
BLAST of PI0006283 vs.
Match NameE-valueIdentityDescription
BLAST of PI0006283 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53002.28.2e-1270.31hypothetical protein Csa_014928 [Cucumis sativus][more]
BLAST of PI0006283 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0006283.1PI0006283.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090630 activation of GTPase activity
biological_process GO:0006886 intracellular protein transport
molecular_function GO:0005096 GTPase activator activity