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PI0006004 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGTTGATCGTCTAAAACAGGACATGATTAAAACATCTAATGACTCCCGTTCGATGAGTGTCGTTATTTTGTGTTTTGGATGATGATGATGATTATTATTATGCGTTTCAGGAAATGGTGAATGTGTGTTGAATGACATTGCAATAAGCCAAACAGCAAGTGGAGCTGTAGTGAAAGGGAAGCAAATATGGAAAGCCACAATTACAAACAATTGTATTTGTTCACAATCAAGTTTGAAACTGGATTGCAATGGATTCAATACAGTTCAAGAAGTTGATCCATCCATAATAGCAGTTGCTGGGTCAGTGTGTTTGGTTAATGGTGGTCAACCAATCTTTGAATCTGAACCCATCTCCTTCACTTATGCTTGGGACAATGCCTTCCCTTTCAAGCCTCTCTCCTCTCAAATTTCTTGTTCTTAA ATGAAAGTTGATCGTCTAAAACAGGACATGATTAAAACATCTAATGACTCCCGAAATGGTGAATGTGTGTTGAATGACATTGCAATAAGCCAAACAGCAAGTGGAGCTGTAGTGAAAGGGAAGCAAATATGGAAAGCCACAATTACAAACAATTGTATTTGTTCACAATCAAGTTTGAAACTGGATTGCAATGGATTCAATACAGTTCAAGAAGTTGATCCATCCATAATAGCAGTTGCTGGGTCAGTGTGTTTGGTTAATGGTGGTCAACCAATCTTTGAATCTGAACCCATCTCCTTCACTTATGCTTGGGACAATGCCTTCCCTTTCAAGCCTCTCTCCTCTCAAATTTCTTGTTCTTAA ATGAAAGTTGATCGTCTAAAACAGGACATGATTAAAACATCTAATGACTCCCGAAATGGTGAATGTGTGTTGAATGACATTGCAATAAGCCAAACAGCAAGTGGAGCTGTAGTGAAAGGGAAGCAAATATGGAAAGCCACAATTACAAACAATTGTATTTGTTCACAATCAAGTTTGAAACTGGATTGCAATGGATTCAATACAGTTCAAGAAGTTGATCCATCCATAATAGCAGTTGCTGGGTCAGTGTGTTTGGTTAATGGTGGTCAACCAATCTTTGAATCTGAACCCATCTCCTTCACTTATGCTTGGGACAATGCCTTCCCTTTCAAGCCTCTCTCCTCTCAAATTTCTTGTTCTTAA MKVDRLKQDMIKTSNDSRNGECVLNDIAISQTASGAVVKGKQIWKATITNNCICSQSSLKLDCNGFNTVQEVDPSIIAVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQISCS Homology
BLAST of PI0006004 vs. ExPASy Swiss-Prot
Match: Q1G3T1 (TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 4.2e-06 Identity = 29/102 (28.43%), Postives = 55/102 (53.92%), Query Frame = 0
BLAST of PI0006004 vs. ExPASy Swiss-Prot
Match: A8MS78 (Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.3e-04 Identity = 32/113 (28.32%), Postives = 52/113 (46.02%), Query Frame = 0
BLAST of PI0006004 vs. ExPASy TrEMBL
Match: A0A0A0LEA1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G875970 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 3.1e-44 Identity = 88/102 (86.27%), Postives = 96/102 (94.12%), Query Frame = 0
BLAST of PI0006004 vs. ExPASy TrEMBL
Match: A0A0A0LDN0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G875990 PE=4 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 1.5e-35 Identity = 72/102 (70.59%), Postives = 83/102 (81.37%), Query Frame = 0
BLAST of PI0006004 vs. ExPASy TrEMBL
Match: A0A0A0KLZ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G500630 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 3.1e-28 Identity = 64/102 (62.75%), Postives = 74/102 (72.55%), Query Frame = 0
BLAST of PI0006004 vs. ExPASy TrEMBL
Match: A0A7N2N519 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 4.0e-28 Identity = 57/102 (55.88%), Postives = 76/102 (74.51%), Query Frame = 0
BLAST of PI0006004 vs. ExPASy TrEMBL
Match: A0A0B0NVJ4 (uncharacterized protein At1g05835-like OS=Gossypium arboreum OX=29729 GN=LOC108462001 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 5.3e-28 Identity = 58/100 (58.00%), Postives = 75/100 (75.00%), Query Frame = 0
BLAST of PI0006004 vs. NCBI nr
Match: KGN60075.1 (hypothetical protein Csa_001952 [Cucumis sativus]) HSP 1 Score: 158.7 bits (400), Expect = 3.2e-35 Identity = 72/102 (70.59%), Postives = 83/102 (81.37%), Query Frame = 0
BLAST of PI0006004 vs. NCBI nr
Match: XP_038896903.1 (TPD1 protein homolog 1-like [Benincasa hispida]) HSP 1 Score: 156.0 bits (393), Expect = 2.1e-34 Identity = 69/100 (69.00%), Postives = 84/100 (84.00%), Query Frame = 0
BLAST of PI0006004 vs. NCBI nr
Match: XP_031742370.1 (uncharacterized protein At1g05835-like [Cucumis sativus] >KGN48771.1 hypothetical protein Csa_003478 [Cucumis sativus]) HSP 1 Score: 134.4 bits (337), Expect = 6.4e-28 Identity = 64/102 (62.75%), Postives = 74/102 (72.55%), Query Frame = 0
BLAST of PI0006004 vs. NCBI nr
Match: XP_017617499.1 (PREDICTED: uncharacterized protein At1g05835-like [Gossypium arboreum] >KHG09846.1 hypothetical protein F383_05114 [Gossypium arboreum] >KHG15126.1 hypothetical protein F383_19054 [Gossypium arboreum] >KHG19660.1 hypothetical protein F383_24223 [Gossypium arboreum]) HSP 1 Score: 133.7 bits (335), Expect = 1.1e-27 Identity = 58/100 (58.00%), Postives = 75/100 (75.00%), Query Frame = 0
BLAST of PI0006004 vs. NCBI nr
Match: XP_016675584.1 (uncharacterized protein At1g05835-like [Gossypium hirsutum] >KAB2047720.1 hypothetical protein ES319_A13G066500v1 [Gossypium barbadense] >TYG85600.1 hypothetical protein ES288_A13G068300v1 [Gossypium darwinii] >TYH90762.1 hypothetical protein ES332_A13G071300v1 [Gossypium tomentosum] >TYJ00145.1 hypothetical protein E1A91_A13G067800v1 [Gossypium mustelinum] >KAG4165160.1 hypothetical protein ERO13_A13G061900v2 [Gossypium hirsutum]) HSP 1 Score: 133.7 bits (335), Expect = 1.1e-27 Identity = 58/100 (58.00%), Postives = 75/100 (75.00%), Query Frame = 0
BLAST of PI0006004 vs. TAIR 10
Match: AT4G32110.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein ) HSP 1 Score: 79.0 bits (193), Expect = 3.0e-15 Identity = 36/101 (35.64%), Postives = 57/101 (56.44%), Query Frame = 0
BLAST of PI0006004 vs. TAIR 10
Match: AT4G32105.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein ) HSP 1 Score: 77.4 bits (189), Expect = 8.7e-15 Identity = 36/101 (35.64%), Postives = 55/101 (54.46%), Query Frame = 0
BLAST of PI0006004 vs. TAIR 10
Match: AT1G32583.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: tapetum determinant 1 (TAIR:AT4G24972.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 52.4 bits (124), Expect = 3.0e-07 Identity = 29/102 (28.43%), Postives = 55/102 (53.92%), Query Frame = 0
BLAST of PI0006004 vs. TAIR 10
Match: AT1G05835.1 (PHD finger protein ) HSP 1 Score: 47.4 bits (111), Expect = 9.6e-06 Identity = 32/113 (28.32%), Postives = 52/113 (46.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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