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PI0006002 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATGGCGAATTATGATCTAAACCTCCAAATTTCTTCCTCCCTTTTTCCCCATTCACACAAACGTCTCATTTCTATAATTTAATCAAATTTTTTACTTTTTGGGTAGCACCCAAATTTGAAGTTCCGTTCCATTTCAATCCGCCATTACAGTGAGAAGAAGAAGAAGAAGAAAATTAAATAGTTGCAGAATGGGAGAGAGAAATTGTAATTTGGAGGACTCTCATTTAATTTTGGTTGTTAAGAAGCTGTGTCTTTGTGTAGATCTTTCATGGTTGAGCAGGTGAAAGTTTTTAATGGCCAACCCCATTAAAAAAGTACTCTTCTCTCCTCCTCCTCCTCCTCCTCCTTATTCTTCTTATTCTTCAGTGACTTTCCAATGTCCCACCGACAATTCTATATAAATGGTTGAAATTATTACTCTCTGTACGTTTTTCCTACTCTCTCACCTGTTTTTTTTCCTCTCTCTCTCTCTTGTTGAAGGCTCTGAATCTCTCTCTAGAGTTATGGTTTATTCAAGGAAGTTCAGAGGAGTCAGGCAGCGGCAGTGGGGCTCTTGGGTGTCAGAAATTCGCCATCCATTGCTGTAAAATTCCCTCTTTTATTATCTTGTTTGTTCTTCTGCTATAAATATAAGTGCCATGGGTTGCAAATTGCTCTGCTACTCTCATTTTCTGTCTCCTGCTCATAACGTGTCTGCTGATTTGCCTGAAAGAAACTTGGCGACTAGGGGGGCGGATATTTTTGCAGATTTGTACAACCAAATTGTTGTTTGTATGTGGGTTATTTGGCTTGTGTTTGTTGGTTCAAATGTGCTCTGAAACCCCATGGTTTTTTTTTTTGGTTGTCCGTAATGTGTTTGATGATTTGCCTGAAAGAAGCTGTAGATTTGTGAACTGAATTATTTGTTGTGTATTTCTCTGCTGTAAATATGTGTATTGCTTGTGTTTGTTTGTTCAAATGAAGTTATGAAAAAGTGAATTGTCCCATTTTCTTTCTTATGCCTCCAAGGAAGCGTGATGGCCATTGGCCATGCTTATTTCTGCTCTACATTGCATATTGAACCCACATTCTTATATTGTTCATGTGATTATTTCTTTGTAGGAAGAGAAGGGTGTGGCTAGGGACATTCGACACGGCCGAGGATGCAGCGCGTGCCTATGATCAAGCAGCCATTTTAATGAATGGCCAAAACGCCAAGACCAATTTCCCTGCATCAAAAGACCAATCTGAAGAAGCCAGCCATGGCCATGGTTCTTCTCCAATGTCTCCAAAAGCACTTTCGGAGCTACTCAGCACAAAGCTCAGAAAGTGCTGCAAGAACCCATCTCCTTCCTTGACATGCCTACGGCTCGATTGTGACAACGCTCACATCGGTGTATGGCAGAAGCGTGCAGGCACTCGAGCCACTTCCAATTGGGTCATGAGGATTGAGCTAGGGAAGAAAGAGGTACCTTCGCCTGAATCGACAAGCCAAGAAGCCGATGGCGATGACCACCAAAATGAAATTGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAGTTACTCAATTGGAACTGCCCTCTTCCTTCAACTTCCAGCTAAGTACAAGATCTCACACAAAACTCTATTCCAAAACTTTAAAAATAAAAAATAACACCCATTAGATTAAAACAAAGAGGCTTAATTAATTTGTGTTTGACTGTGTATGTTGTGTGTATATATACATACACATATATATATATACATATATATAGTTTTTATTCCTATTTTCTGTTACTCTCAGCTTATGTAAAGCTGTTTATGGGACTTAGGGAAGCTCAAAATCTGTATAGAGGGGGAGCTTTTGCATATAGATAAGTTGCTGTTTTATGTCATCTTTTGTAATTTATATATATTTGAAAAAAGTATATATTTTATATATATATAAATAT AATGGCGAATTATGATCTAAACCTCCAAATTTCTTCCTCCCTTTTTCCCCATTCACACAAACGTCTCATTTCTATAATTTAATCAAATTTTTTACTTTTTGGGTAGCACCCAAATTTGAAGTTCCGTTCCATTTCAATCCGCCATTACAGTGAGAAGAAGAAGAAGAAGAAAATTAAATAGTTGCAGAATGGGAGAGAGAAATTGTAATTTGGAGGACTCTCATTTAATTTTGGTTGTTAAGAAGCTGTGTCTTTGTGTAGATCTTTCATGGTTGAGCAGGTGAAAGTTTTTAATGGCCAACCCCATTAAAAAAGTACTCTTCTCTCCTCCTCCTCCTCCTCCTCCTTATTCTTCTTATTCTTCAGTGACTTTCCAATGTCCCACCGACAATTCTATATAAATGGTTGAAATTATTACTCTCTGTACGTTTTTCCTACTCTCTCACCTGTTTTTTTTCCTCTCTCTCTCTCTTGTTGAAGGCTCTGAATCTCTCTCTAGAGTTATGGTTTATTCAAGGAAGTTCAGAGGAGTCAGGCAGCGGCAGTGGGGCTCTTGGGTGTCAGAAATTCGCCATCCATTGCTGAAGAGAAGGGTGTGGCTAGGGACATTCGACACGGCCGAGGATGCAGCGCGTGCCTATGATCAAGCAGCCATTTTAATGAATGGCCAAAACGCCAAGACCAATTTCCCTGCATCAAAAGACCAATCTGAAGAAGCCAGCCATGGCCATGGTTCTTCTCCAATGTCTCCAAAAGCACTTTCGGAGCTACTCAGCACAAAGCTCAGAAAGTGCTGCAAGAACCCATCTCCTTCCTTGACATGCCTACGGCTCGATTGTGACAACGCTCACATCGGTGTATGGCAGAAGCGTGCAGGCACTCGAGCCACTTCCAATTGGGTCATGAGGATTGAGCTAGGGAAGAAAGAGGTACCTTCGCCTGAATCGACAAGCCAAGAAGCCGATGGCGATGACCACCAAAATGAAATTGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAGTTACTCAATTGGAACTGCCCTCTTCCTTCAACTTCCAGCTAAGTACAAGATCTCACACAAAACTCTATTCCAAAACTTTAAAAATAAAAAATAACACCCATTAGATTAAAACAAAGAGGCTTAATTAATTTGTGTTTGACTGTGTATGTTGTGTGTATATATACATACACATATATATATATACATATATATAGTTTTTATTCCTATTTTCTGTTACTCTCAGCTTATGTAAAGCTGTTTATGGGACTTAGGGAAGCTCAAAATCTGTATAGAGGGGGAGCTTTTGCATATAGATAAGTTGCTGTTTTATGTCATCTTTTGTAATTTATATATATTTGAAAAAAGTATATATTTTATATATATATAAATAT ATGGTTGAAATTATTACTCTCTGTACGTTTTTCCTACTCTCTCACCTGTTTTTTTTCCTCTCTCTCTCTCTTGTTGAAGGCTCTGAATCTCTCTCTAGAGTTATGGTTTATTCAAGGAAGTTCAGAGGAGTCAGGCAGCGGCAGTGGGGCTCTTGGGTGTCAGAAATTCGCCATCCATTGCTGAAGAGAAGGGTGTGGCTAGGGACATTCGACACGGCCGAGGATGCAGCGCGTGCCTATGATCAAGCAGCCATTTTAATGAATGGCCAAAACGCCAAGACCAATTTCCCTGCATCAAAAGACCAATCTGAAGAAGCCAGCCATGGCCATGGTTCTTCTCCAATGTCTCCAAAAGCACTTTCGGAGCTACTCAGCACAAAGCTCAGAAAGTGCTGCAAGAACCCATCTCCTTCCTTGACATGCCTACGGCTCGATTGTGACAACGCTCACATCGGTGTATGGCAGAAGCGTGCAGGCACTCGAGCCACTTCCAATTGGGTCATGAGGATTGAGCTAGGGAAGAAAGAGGTACCTTCGCCTGAATCGACAAGCCAAGAAGCCGATGGCGATGACCACCAAAATGAAATTGATGAAGAAGACAGAATTGCAATGCAAATGATTGAAGAGTTACTCAATTGGAACTGCCCTCTTCCTTCAACTTCCAGCTAA MVEIITLCTFFLLSHLFFFLSLSLVEGSESLSRVMVYSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAEDAARAYDQAAILMNGQNAKTNFPASKDQSEEASHGHGSSPMSPKALSELLSTKLRKCCKNPSPSLTCLRLDCDNAHIGVWQKRAGTRATSNWVMRIELGKKEVPSPESTSQEADGDDHQNEIDEEDRIAMQMIEELLNWNCPLPSTSS Homology
BLAST of PI0006002 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 3.5e-59 Identity = 117/182 (64.29%), Postives = 138/182 (75.82%), Query Frame = 0
BLAST of PI0006002 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 1.0e-58 Identity = 119/189 (62.96%), Postives = 145/189 (76.72%), Query Frame = 0
BLAST of PI0006002 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 3.7e-56 Identity = 114/200 (57.00%), Postives = 146/200 (73.00%), Query Frame = 0
BLAST of PI0006002 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.2e-22 Identity = 74/177 (41.81%), Postives = 97/177 (54.80%), Query Frame = 0
BLAST of PI0006002 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 7.2e-20 Identity = 50/93 (53.76%), Postives = 64/93 (68.82%), Query Frame = 0
BLAST of PI0006002 vs. ExPASy TrEMBL
Match: A0A0A0LJA8 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G878210 PE=4 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 8.7e-101 Identity = 187/194 (96.39%), Postives = 187/194 (96.39%), Query Frame = 0
BLAST of PI0006002 vs. ExPASy TrEMBL
Match: A0A5A7T6E0 (Ethylene-responsive transcription factor SHINE 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003670 PE=4 SV=1) HSP 1 Score: 372.5 bits (955), Expect = 1.3e-99 Identity = 185/189 (97.88%), Postives = 186/189 (98.41%), Query Frame = 0
BLAST of PI0006002 vs. ExPASy TrEMBL
Match: A0A1S3CR71 (ethylene-responsive transcription factor SHINE 2-like OS=Cucumis melo OX=3656 GN=LOC103503822 PE=4 SV=1) HSP 1 Score: 369.4 bits (947), Expect = 1.1e-98 Identity = 184/189 (97.35%), Postives = 185/189 (97.88%), Query Frame = 0
BLAST of PI0006002 vs. ExPASy TrEMBL
Match: A0A5D3E5T0 (Ethylene-responsive transcription factor SHINE 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007440 PE=4 SV=1) HSP 1 Score: 369.4 bits (947), Expect = 1.1e-98 Identity = 184/189 (97.35%), Postives = 185/189 (97.88%), Query Frame = 0
BLAST of PI0006002 vs. ExPASy TrEMBL
Match: A0A6J1F8L5 (ethylene-responsive transcription factor SHINE 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443124 PE=4 SV=1) HSP 1 Score: 359.4 bits (921), Expect = 1.1e-95 Identity = 181/196 (92.35%), Postives = 185/196 (94.39%), Query Frame = 0
BLAST of PI0006002 vs. NCBI nr
Match: XP_038899928.1 (ethylene-responsive transcription factor SHINE 2-like isoform X1 [Benincasa hispida]) HSP 1 Score: 409.8 bits (1052), Expect = 1.5e-110 Identity = 212/230 (92.17%), Postives = 215/230 (93.48%), Query Frame = 0
BLAST of PI0006002 vs. NCBI nr
Match: XP_038899931.1 (ethylene-responsive transcription factor SHINE 2-like isoform X3 [Benincasa hispida]) HSP 1 Score: 377.5 bits (968), Expect = 8.0e-101 Identity = 195/224 (87.05%), Postives = 198/224 (88.39%), Query Frame = 0
BLAST of PI0006002 vs. NCBI nr
Match: XP_004136348.1 (ethylene-responsive transcription factor SHINE 2 [Cucumis sativus] >XP_011652482.1 ethylene-responsive transcription factor SHINE 2 [Cucumis sativus] >KGN60101.1 hypothetical protein Csa_000793 [Cucumis sativus]) HSP 1 Score: 376.3 bits (965), Expect = 1.8e-100 Identity = 187/194 (96.39%), Postives = 187/194 (96.39%), Query Frame = 0
BLAST of PI0006002 vs. NCBI nr
Match: KAA0038810.1 (ethylene-responsive transcription factor SHINE 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 372.5 bits (955), Expect = 2.6e-99 Identity = 185/189 (97.88%), Postives = 186/189 (98.41%), Query Frame = 0
BLAST of PI0006002 vs. NCBI nr
Match: XP_008466408.1 (PREDICTED: ethylene-responsive transcription factor SHINE 2-like [Cucumis melo] >XP_008466410.1 PREDICTED: ethylene-responsive transcription factor SHINE 2-like [Cucumis melo] >TYK31433.1 ethylene-responsive transcription factor SHINE 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 369.4 bits (947), Expect = 2.2e-98 Identity = 184/189 (97.35%), Postives = 185/189 (97.88%), Query Frame = 0
BLAST of PI0006002 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 229.6 bits (584), Expect = 2.5e-60 Identity = 117/182 (64.29%), Postives = 138/182 (75.82%), Query Frame = 0
BLAST of PI0006002 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 228.0 bits (580), Expect = 7.3e-60 Identity = 119/189 (62.96%), Postives = 145/189 (76.72%), Query Frame = 0
BLAST of PI0006002 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 219.5 bits (558), Expect = 2.6e-57 Identity = 114/200 (57.00%), Postives = 146/200 (73.00%), Query Frame = 0
BLAST of PI0006002 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 218.8 bits (556), Expect = 4.4e-57 Identity = 114/182 (62.64%), Postives = 135/182 (74.18%), Query Frame = 0
BLAST of PI0006002 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 108.2 bits (269), Expect = 8.5e-24 Identity = 74/177 (41.81%), Postives = 97/177 (54.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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