PI0005981 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAACTCTTCTTACTTATTTTGTGCAAGGAGGTCCTCTCAAAGTAACCAAGTGTGGAGTTTGTGGCTTGGTTGGACATCCCAATGACAAATGTCCCGAGTTGATCGAGGATGTGAATGTCATTCAAAAGTATGACTCCCATGGTAATACATACAATTCGGGATGGAGAGGCAACCCAAACTTGAGATGGGGGAATGACAACCAAAGGCCCACTCAAGCAACATCCTCCTTTTCAAACCAAGGTATGACCCTTGAAAACATAGTCAAAGCTTTAGCTACTAACACTCTTTCTTTTCAACAAGAGATGAAACAACACATGACTCAACTTACTACTGCCACAAGCAAGTTGGAAGGAAAAGGCAAGCTTCCAGCCCAACCAGACCATGCCAACCTGAGTGCCATCTCACTAAGAAGTGATAAGATTCTCGACACCCCTTCTATTGAAGACAAAAAGGTAACTCCCAATCCTATCCCTCTTGAAATTATGAAAATGAGTCTAAGGAAGAAAAGGTTGAAGCAACTTTACCATTTAATTCTAAGAAAGATAAACTTCCTCTTAATGATTTTACTCCTTATATTCCTAAACCTCATTTTCCTTCTAGGTTGGCTCCAAAGAAGAAGGAAACACCCAAGGAAGAAGAACTTTGGAGATTGTTAGAAAGGTGCAAATCAACTTGCCCCTTCTCGATGCAATCCAACAAGTACCAAGGTATGCGAAGTTTCTTAAGGAGTTGTGTACCAACAAGAGGAAAACAAAAAAAAAGGCAATTGTAAGTCATAATGTTTCGGCTCTTTTGAAGAATATTATTTCTGAAAAATGCAATGATCCCGGTATGTTTTTTCTTCCATGTGTAATAGGAAATAGACTAATTTCTCATGCAATGCTTGACTTAGGAGCATCTATAAATGTCATGCCCTATATTGTCTTTAAAGATCTAGAACTTAATAATTTGCAAAAAACTAGTGTGTGTACACAACTAGCGAATAGATCTTTTATTTCACCATCAGGCATAGTTGAAGATGTTCTTGTGAAAATTGACAAATTAATCTTTTCGACGGACTTTTACATATTAGAAATGAATGAAGCATGCCTTAAACCATCCCACTCTATTTTGTTAGGTAAGCCTTTCTTGAAAACTGCAAAAGCTATTATAAATATTGATAAAGGTTTCTTAAGTGTAGAGTTCAATGGAGACATTGTTACATTAGATATTTTTGAATCTATGAAGTATCCGAAAGAATTTCTATCTTTATGTTCAATAGAATTGCATGATGAAATTGATGAGATGTCTATACATGATGAATGTTTTGATCAAGAGATGGTTGAAAATAGAGAATTGTTACAGCCTAATATTGATTATGCCTTAGAAAAAAATGATTGTGATAATCTTTTCTTTTCTCCACAGGAACACGGGATTGAGCTCAAGGCTCACCATCGCACTTAAAATACGTATTCTTAGGAGAAAAAGATACGTTTTCCGTGATCATCTCAAGGGAACTAGATCAAAAGCAAGAAGAGAGACTTATCGAAGTCTTGAAAAAGAAAAGGAAAGCGATTGGTTGGACACTTGACGACATTAAGGGTATATCTCCCACCTTTTGCATGCACCGAATCGTCTTGGAGGAGGGAACAAAGGACAAAATCCAACCGTAAAGAAGGCTTAACTCGACATTTAAGGATGTTGTCATGAAGGAGGTACTAAAGCTAAAAGATGTCGGAATCATCTATTCCATCCCGGATAGTACTTGGGTGAGTCCAATTCATGTGATCCCAAAGAAGACCGGGATGACCGTTGTAAAAAACGACAAAGGTGAGATGGTTTTGATGCGGGTGCAAAATGGTTGGAGAATGTGCATAAACTACCAAAAACTCAATGAGGTAACAAAAAAAGATCATATCCCCTTACCTTTTCTTGATCACATGATAGAACATTTAGCGAGTAGATCCTATTTTTGTTTCTTAGATGGATTTTTTGGTTTTTACCAAATCCCCATTGCATGTGAAGACCTAAATAAAACGACTTTTACTTGTGATTATGGAACTTATGCATTTAGGCATAGTTTGGCAAAAAAGATGAGACAGAATAAGTCTATTTCTCCACTGGATCCATTTGGGACCGATAATGTCATCAGGTGTATATTCTTCCATTTTGTGTTCCTTCATTTCTAATCATTTTAATATTTATCAGTTTTAAATCAATGCTGCATTTTTTGATGTATTGTTCAGGTACAATGGGAAAGGCACTAA ATGACAACTCTTCTTACTTATTTTGTGCAAGGAGGTCCTCTCAAAGTAACCAAGTGTGGAGTTTGTGGCTTGGTTGGACATCCCAATGACAAATGTCCCGAGTTGATCGAGGATGTGAATGTCATTCAAAAGTATGACTCCCATGGTAATACATACAATTCGGGATGGAGAGGCAACCCAAACTTGAGATGGGGGAATGACAACCAAAGGCCCACTCAAGCAACATCCTCCTTTTCAAACCAAGGTATGACCCTTGAAAACATAGTCAAAGCTTTAGCTACTAACACTCTTTCTTTTCAACAAGAGATGAAACAACACATGACTCAACTTACTACTGCCACAAGCAAGTTGGAAGGAAAAGGCAAGCTTCCAGCCCAACCAGACCATGCCAACCTGAGTGCCATCTCACTAAGAAGTGATAAGATTCTCGACACCCCTTCTATTGAAGACAAAAAGGTACAATGGGAAAGGCACTAA ATGACAACTCTTCTTACTTATTTTGTGCAAGGAGGTCCTCTCAAAGTAACCAAGTGTGGAGTTTGTGGCTTGGTTGGACATCCCAATGACAAATGTCCCGAGTTGATCGAGGATGTGAATGTCATTCAAAAGTATGACTCCCATGGTAATACATACAATTCGGGATGGAGAGGCAACCCAAACTTGAGATGGGGGAATGACAACCAAAGGCCCACTCAAGCAACATCCTCCTTTTCAAACCAAGGTATGACCCTTGAAAACATAGTCAAAGCTTTAGCTACTAACACTCTTTCTTTTCAACAAGAGATGAAACAACACATGACTCAACTTACTACTGCCACAAGCAAGTTGGAAGGAAAAGGCAAGCTTCCAGCCCAACCAGACCATGCCAACCTGAGTGCCATCTCACTAAGAAGTGATAAGATTCTCGACACCCCTTCTATTGAAGACAAAAAGGTACAATGGGAAAGGCACTAA MTTLLTYFVQGGPLKVTKCGVCGLVGHPNDKCPELIEDVNVIQKYDSHGNTYNSGWRGNPNLRWGNDNQRPTQATSSFSNQGMTLENIVKALATNTLSFQQEMKQHMTQLTTATSKLEGKGKLPAQPDHANLSAISLRSDKILDTPSIEDKKVQWERH Homology
BLAST of PI0005981 vs. ExPASy TrEMBL
Match: A0A5D3DCG3 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold860G00100 PE=4 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 2.1e-64 Identity = 123/153 (80.39%), Postives = 136/153 (88.89%), Query Frame = 0
BLAST of PI0005981 vs. ExPASy TrEMBL
Match: A0A1S4E3R2 (uncharacterized protein LOC107991910 OS=Cucumis melo OX=3656 GN=LOC107991910 PE=4 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 2.1e-64 Identity = 123/153 (80.39%), Postives = 136/153 (88.89%), Query Frame = 0
BLAST of PI0005981 vs. ExPASy TrEMBL
Match: E5GBZ4 (Retrotransposon gag protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 1.3e-63 Identity = 122/153 (79.74%), Postives = 138/153 (90.20%), Query Frame = 0
BLAST of PI0005981 vs. ExPASy TrEMBL
Match: A0A5D3CFE7 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00840 PE=4 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 8.7e-63 Identity = 119/153 (77.78%), Postives = 134/153 (87.58%), Query Frame = 0
BLAST of PI0005981 vs. ExPASy TrEMBL
Match: A0A5D3CRR8 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00610 PE=4 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 1.1e-62 Identity = 120/152 (78.95%), Postives = 137/152 (90.13%), Query Frame = 0
BLAST of PI0005981 vs. NCBI nr
Match: XP_016902871.1 (PREDICTED: uncharacterized protein LOC107991910 [Cucumis melo]) HSP 1 Score: 255.0 bits (650), Expect = 4.3e-64 Identity = 123/153 (80.39%), Postives = 136/153 (88.89%), Query Frame = 0
BLAST of PI0005981 vs. NCBI nr
Match: KAA0051761.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK21361.1 retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 255.0 bits (650), Expect = 4.3e-64 Identity = 123/153 (80.39%), Postives = 136/153 (88.89%), Query Frame = 0
BLAST of PI0005981 vs. NCBI nr
Match: ADN33993.1 (retrotransposon gag protein [Cucumis melo subsp. melo]) HSP 1 Score: 252.3 bits (643), Expect = 2.8e-63 Identity = 122/153 (79.74%), Postives = 138/153 (90.20%), Query Frame = 0
BLAST of PI0005981 vs. NCBI nr
Match: TYK10613.1 (retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 249.6 bits (636), Expect = 1.8e-62 Identity = 119/153 (77.78%), Postives = 134/153 (87.58%), Query Frame = 0
BLAST of PI0005981 vs. NCBI nr
Match: KAA0047407.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK14082.1 retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 249.2 bits (635), Expect = 2.3e-62 Identity = 120/152 (78.95%), Postives = 137/152 (90.13%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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