PI0005972 (gene) Melon (PI 482460) v1

Overview


Name	PI0005972
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	methyl-CpG-binding domain-containing protein 2-like
Location	chr05: 6491810 .. 6496804 (+)
RNA-Seq Expression	PI0005972
Synteny	PI0005972

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCAGTAACGTAAATTGGAACTGATTAGATTCATAAGTCTAATCCAAACCATAAACAATTAAACGACAATAATTCAATAATTTTAAGAATATGATGTTGTTGTTTTTGGACTAAAACCCATTTTCTAAATTCCATTAACGAATCAATCCACCTTCTTCTTCTTCCTTCTCTTCACAACGTCTATCTGCAAAATCCTTTCTCCCTCTTCTCCTTTCCCTTTTCCCGAGGCCTTACCCATCATTTCAACACCAAAATTCCCACACCCACCTTCCATTTTCCTTAGTTCTTCCGCATTTTCATCCCCCCACCTCCCCATTTCCTTGAAATCAACGCATTTCATCTCTCTTCTCTTCCTATGATTCTAAATTTGTGTAAACATCTCTTTCTTTCTCCTCTGTTTTTTTATATATATATATATATATATATTTGTTTCGATTTTCTTCGTTGGGTTGTGTTTTCCATTTTTGCATCGGCTGTTTGTTTGTTTTTGTTGGGTATTTGAGTCAATTGTTGAGGGGAATGGTGTTTGGAATTGAAGAATTTGTGGGTTTGATGGTTTAGATGGGTTGAATGATATTTTGGGTTTGGGTGTTTTATTTTTTTAATTTTTGATGGTGGGAGAGGGTGTGGATCTATGGTGGAGGTGGGTTTGTGTTATGGGTTCCGATCGAGATAAGAATTGAATGATCTCATGAGATTGGTCGCCAATTTTTTGTTTTTTGCTCTTTGATTATGAAGCTGGAGGGAAATTGTGGTTATGCTTCTTCTCCTCCCATGCGGTCGATCTTGCCGTTTCGTTTTCTTTTTTGTTGTGGGTTTTCTGTTCTAAGATGATCTTGCTGGCTTTAGCTGTATTGGGTTCAAATCTTTCTTCTTGTTGCTCGTGATGATCTCTTCACTGCATTGTTGTTTAGAGCTTGGAGTTATGTGCTAACCCTTCTCGCCTCTTTCACATTTTGATCATCGCTTAAGTTTGTTGCGTTTACAAATTTTTTTTTAATGTTTTATATATATACATATATAGGAAGTTTTTGTTTGTAGCAAGGAAATTCGGAGGCTTTGGTTGTTTGTAATATCGTGCACTATCCTTATGTCTTTCTTGGATGAAACACCGAGTTTTATTGAGATGAGTAAAAAAATGCAAGTAACAGGGGAGCTTAACTTAGAAGACCCAAAAGGAAAACCTTCAATATAGATTCAATAAAGGGGTTGCAAAGCGAGACATACGGATGTGTTAGAGACCATGAGATTTGTGTTAGAATCCCCCACCTATTGTACTGAAAAAATCGTAGATTCAATAAAGATTCCAATCAATAAGAATAAGGATGAAAAAAATAACTCCAAAACTTTTTATAAATATACACCCACAGTAAGGTGTTGAACTTATCTCTATAAGTTTTCTTAAGAAAATGGAAATACACCTTATGAATATTTTGAGTTTAATGTTAAATTAATTCTGTTTATTTCCCTGTTCCTTTACTTTAACTATTTGGTAGTAACAACTCTCAACAAACTTTTACTAACTAATGTATTGACCAGCTAACTCAATGTCCAACAACTATCCCCCTTCTCTAACTGATTACTCTTGAGATTGTAAATTCTTTTTGGACTTCATCATTTTTTCTTAGCTTATTGGTGTTGTTCTCTTCATAAATCTTCTGTGAATTATACTAAGTTCTTTTTACCCTTGCAATTAGGAAGATTATCCTATCCTGACCTGTTTGTGGTATCTTTTCTTCTCAAGGATTTCATCTTTGCTTTGAGTTTTGACTTGTAAAGATGTGATTGTCTTGTTATTGAATATCAGAATTTGGGATTATGTTTCAATTGGAACACTATTTTCTCTCTTAGTGATTATTCTTGTTCGATCGATGCCAATAAATGTTTCATTTGGTAATCTCTTTTGGCATTGGGAGTGGGAGTACATCCCCTTCCCTCTTGGTAATAAAATTTACTTTTTCGTTTCTAATAAAAAGAATGTAAACTGAGATTGCATTGCTTCTCTTTGGCATGTGTGACGAGTTTTTTCTGTAATTATTATTTGTTGGGATTTATTTTGTTTGATTAGAAACCCTTATTTTAAGATGCTCCTGTTTGTGGGCTAGGTTTTTTGTTTGCCCTTGTGTTCTTTCATCTTTTGTCAACGAAATTCGGTCTTTTATCCCAATAAAACAAACTGAGATTATAGTTTGAATCTGTTTTCTTTGTCTATGGCAGGGTTTTGGATCACAGTATGATGTGGTTAAAGCGCTGATAAAATTACCAGTATGGTTGGTGGGGAAGAAAATGACTTGAATGAGCCAAGTTTGTCAAACGACCAAGAAACTCCACGGCAAGATGTTATAGCTGTTTCTTCCTCTTCATCCTCTTTGTCATCTTCTTCGTCTGAGAACGAGTTACATGAGACTAGGAATGAGAATGCCCAATCTCAATCTAATGAAAATCCCTCTCGTGAACTGGTTATATACAATCCGTCTGCTAATGATGGACGTGCAAATGATCCTGTATCCACACCTGTTAAGCAGCAGCCTTCACCACCACTTCTTGGACACTTGACTCCCAATTCTTCCAGAGTCTTACCATCGGTAGGGGCCTTTACTGTCCAATGTGCAGGCTGTTTTAAATGGAGGCTCATTCCAACGAAGGAAAAATATGAGGAAATACGAGAACATCTGTTAGAGCAACCTTTTTACTGTGAAACTGCTCGTGAGTGGCGGCCTGATATCTCTTGTGATGATCCTGCTGACATTACTCAAGATGGTAGTAGGCTTTGGGCAATTGACAAGCCGAATATAGCACAGCCCCCTCCTGGCTGGCAAAGGCTATTACACATCAGAGGTGAAGGAAGCACCAAGTTTGCTGATGTGTATGTACTTTAAATTCTGTATTATCACTGCTTTTTTTGTGGGTTTTAGACATATCTGTCATCAGTTTGACTTGGACTACTACCATATCTCTCTAAAATTCTTATTCTCGTTTTTTTGGGTTTATTGTTATGAATTATACTAAAAGAACAAGTCCCATAGTTAAATATCTTTGTGTTTGCTTAAAATTTAAATGTCTTCTATAGTATCATTTTTCCTTTCATGGCTTCAGTTAGCCACAAATCACCGTTATTATCATTTACATTGCCATTGCTGTTATCAAAGACGTCATGGTTACTATTCTTTTGTAAAGATGTCAAATCTTTTTCCTTCTCATCATTACATTATCACTTGTACAGTGTACTCATTGTTGTTACTCTGAGATTGTGTCTAAACCAAGAAATACTAACCATTTGATTCTCTACTAAAAGATTTTCGCATCATTAAAATATTTTGATAGGATGAATGATTTTAATTGAAGGGGGTTAACCAGGTCCAAATTAGTGGAAATACTAATTGTCGTAATGAAGCTGAAAGGTCATTTGAATTGTACTTTGTCATTTCTAGAATCATTGGGATCTTATTAAATTTGATATTTTACTGCTATCAGGTATTACACTGCTCCATCAGGCAAGAAGCTTCGTTCGATGGTGGATATCCAGAAGTATGTTGCTATATATCATGCTTTAAACTCTATTTAATGTTATTTCTTTTCTGTTCGATTGAATTCTCGTAAATAGTTTGTGGCCTACAAATATAGTGTGTATATTGACTTCTTTTTTGGCATCCTCTGATTGTTCATGTGGTTCTGAAGATACCTGATTGAACATCCAGAGTACCAAACGGAAGGTGTATCCATGACACGGTTTTCATTTCAAATCCCAAAGCCTCTGCGGGAAGATTATGTGAGAAAGCGGCGCCCCAATATGAATGCTTCATGTGATGGTTCTAAGCTTGAATCTGGTGAAGGTACTTGTTTCCTATTTGTCCCTTGGCCTGCACTGTGCCTGTTACCCTTTCAGTTAGAGAGGAAAAGAAGAAATATTGAGATCCTGGAAGCTGGCGTGGTCTCTTTTTAGATTTAATTATCTTATGTTTTTCTTTTGATTATCTTTTTTAGGCTTTATCCTTTGAAATTAGAGACCCCTTTGATGAATAGTTCTGGACGGGGCAATTCCTTTTGTTGGTTTTTTTTTCTTCATTCTTTTGTTTTCCCTTTCAATATTCTTGCAGGTTTACTGACTAAAAGAAACATTTTAGTCTAGCTTTTCAAAACTGTTTTTAATTTAAAGGTGAACAATGATGCTAGAAACTAACTATATAAAAAAAGATCAAATTCTAAACTTTTTAATGCTCTTTCAAGATATAGATTTAAATTGGAATCTTTTATTTTTTTCTTGTTATCTGGTTCTGTTTCTATAAAAGTTGTCTTTTTTTTCCTCTACATTGACCATATTTATTTGAAAGCTTTACTGATTTGTGCAGTGCGCCCAATATCATGGGCTTGTCCAGATGACTCTACTGCATTGCAGCTTGGAAAGCCCGGGCTCCCAGAACTGATTTCGACTTCACCGGTTGACAATCCCGTTACTCGACCAGCGAAGAAGGTGAAAAGAGCTCTAGCACAGGAGATGCGTAGAAGTTCTCTTGCATCGACTGAACCTCCTGCCATTAAGTTAGAACGTTGCTTTGATCAATATGAAAAATAATATTGGTGAGAACTGGTTGATCTTGGGATTGCTTTCTGTTCCTTGTTTTGTTGCTTTACATGGTTCCATCAAAGTGGAAAAGGAGATTGTAACTCAAAACGATGACAAAAAGGAGGAATTTTGGAAGGGAAACTGTGACAAAGCATGTATATTATCATAACCTTATAGGGTAATTTTTGGTCCTTGCTTGTTTGTTTCAGTTAAACAACATGTGAGGTAAGGATGATTCAAACCTCTTGACATCTTTGGTCGTGGGTATATAACCTTAAATCAATCGAGTTATGCTCGAGATGACTACATTCTATTTTGGGTAGAGATTACATGTAGAGAACGAGAGGGAAGAACATGGGTCTCAAGAATGTAACTAAAGATTCTACCTCAAAAATCTTGTATGATATGAATTTAAAAATTATTTTCAAGTA

mRNA sequence

GGCAGTAACGTAAATTGGAACTGATTAGATTCATAAGTCTAATCCAAACCATAAACAATTAAACGACAATAATTCAATAATTTTAAGAATATGATGTTGTTGTTTTTGGACTAAAACCCATTTTCTAAATTCCATTAACGAATCAATCCACCTTCTTCTTCTTCCTTCTCTTCACAACGTCTATCTGCAAAATCCTTTCTCCCTCTTCTCCTTTCCCTTTTCCCGAGGCCTTACCCATCATTTCAACACCAAAATTCCCACACCCACCTTCCATTTTCCTTAGTTCTTCCGCATTTTCATCCCCCCACCTCCCCATTTCCTTGAAATCAACGCATTTCATCTCTCTTCTCTTCCTATGATTCTAAATTTGTGGTTTTGGATCACAGTATGATGTGGTTAAAGCGCTGATAAAATTACCAGTATGGTTGGTGGGGAAGAAAATGACTTGAATGAGCCAAGTTTGTCAAACGACCAAGAAACTCCACGGCAAGATGTTATAGCTGTTTCTTCCTCTTCATCCTCTTTGTCATCTTCTTCGTCTGAGAACGAGTTACATGAGACTAGGAATGAGAATGCCCAATCTCAATCTAATGAAAATCCCTCTCGTGAACTGGTTATATACAATCCGTCTGCTAATGATGGACGTGCAAATGATCCTGTATCCACACCTGTTAAGCAGCAGCCTTCACCACCACTTCTTGGACACTTGACTCCCAATTCTTCCAGAGTCTTACCATCGGTAGGGGCCTTTACTGTCCAATGTGCAGGCTGTTTTAAATGGAGGCTCATTCCAACGAAGGAAAAATATGAGGAAATACGAGAACATCTGTTAGAGCAACCTTTTTACTGTGAAACTGCTCGTGAGTGGCGGCCTGATATCTCTTGTGATGATCCTGCTGACATTACTCAAGATGGTAGTAGGCTTTGGGCAATTGACAAGCCGAATATAGCACAGCCCCCTCCTGGCTGGCAAAGGCTATTACACATCAGAGGTGAAGGAAGCACCAAGTTTGCTGATGTGTATTACACTGCTCCATCAGGCAAGAAGCTTCGTTCGATGGTGGATATCCAGAAATACCTGATTGAACATCCAGAGTACCAAACGGAAGGTGTATCCATGACACGGTTTTCATTTCAAATCCCAAAGCCTCTGCGGGAAGATTATGTGAGAAAGCGGCGCCCCAATATGAATGCTTCATGTGATGGTTCTAAGCTTGAATCTGGTGAAGTGCGCCCAATATCATGGGCTTGTCCAGATGACTCTACTGCATTGCAGCTTGGAAAGCCCGGGCTCCCAGAACTGATTTCGACTTCACCGGTTGACAATCCCGTTACTCGACCAGCGAAGAAGGTGAAAAGAGCTCTAGCACAGGAGATGCGTAGAAGTTCTCTTGCATCGACTGAACCTCCTGCCATTAAGTTAGAACGTTGCTTTGATCAATATGAAAAATAATATTGGTGAGAACTGGTTGATCTTGGGATTGCTTTCTGTTCCTTGTTTTGTTGCTTTACATGGTTCCATCAAAGTGGAAAAGGAGATTGTAACTCAAAACGATGACAAAAAGGAGGAATTTTGGAAGGGAAACTGTGACAAAGCATGTATATTATCATAACCTTATAGGGTAATTTTTGGTCCTTGCTTGTTTGTTTCAGTTAAACAACATGTGAGGTAAGGATGATTCAAACCTCTTGACATCTTTGGTCGTGGGTATATAACCTTAAATCAATCGAGTTATGCTCGAGATGACTACATTCTATTTTGGGTAGAGATTACATGTAGAGAACGAGAGGGAAGAACATGGGTCTCAAGAATGTAACTAAAGATTCTACCTCAAAAATCTTGTATGATATGAATTTAAAAATTATTTTCAAGTA

Coding sequence (CDS)

ATGGTTGGTGGGGAAGAAAATGACTTGAATGAGCCAAGTTTGTCAAACGACCAAGAAACTCCACGGCAAGATGTTATAGCTGTTTCTTCCTCTTCATCCTCTTTGTCATCTTCTTCGTCTGAGAACGAGTTACATGAGACTAGGAATGAGAATGCCCAATCTCAATCTAATGAAAATCCCTCTCGTGAACTGGTTATATACAATCCGTCTGCTAATGATGGACGTGCAAATGATCCTGTATCCACACCTGTTAAGCAGCAGCCTTCACCACCACTTCTTGGACACTTGACTCCCAATTCTTCCAGAGTCTTACCATCGGTAGGGGCCTTTACTGTCCAATGTGCAGGCTGTTTTAAATGGAGGCTCATTCCAACGAAGGAAAAATATGAGGAAATACGAGAACATCTGTTAGAGCAACCTTTTTACTGTGAAACTGCTCGTGAGTGGCGGCCTGATATCTCTTGTGATGATCCTGCTGACATTACTCAAGATGGTAGTAGGCTTTGGGCAATTGACAAGCCGAATATAGCACAGCCCCCTCCTGGCTGGCAAAGGCTATTACACATCAGAGGTGAAGGAAGCACCAAGTTTGCTGATGTGTATTACACTGCTCCATCAGGCAAGAAGCTTCGTTCGATGGTGGATATCCAGAAATACCTGATTGAACATCCAGAGTACCAAACGGAAGGTGTATCCATGACACGGTTTTCATTTCAAATCCCAAAGCCTCTGCGGGAAGATTATGTGAGAAAGCGGCGCCCCAATATGAATGCTTCATGTGATGGTTCTAAGCTTGAATCTGGTGAAGTGCGCCCAATATCATGGGCTTGTCCAGATGACTCTACTGCATTGCAGCTTGGAAAGCCCGGGCTCCCAGAACTGATTTCGACTTCACCGGTTGACAATCCCGTTACTCGACCAGCGAAGAAGGTGAAAAGAGCTCTAGCACAGGAGATGCGTAGAAGTTCTCTTGCATCGACTGAACCTCCTGCCATTAAGTTAGAACGTTGCTTTGATCAATATGAAAAATAA

Protein sequence

MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSLSSSSSENELHETRNENAQSQSNENPSRELVIYNPSANDGRANDPVSTPVKQQPSPPLLGHLTPNSSRVLPSVGAFTVQCAGCFKWRLIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQIPKPLREDYVRKRRPNMNASCDGSKLESGEVRPISWACPDDSTALQLGKPGLPELISTSPVDNPVTRPAKKVKRALAQEMRRSSLASTEPPAIKLERCFDQYEK

Homology

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BLAST of PI0005972 vs. ExPASy Swiss-Prot
Match: Q8LA53 (Methyl-CpG-binding domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=MBD2 PE=1 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 2.7e-74
Identity = 151/284 (53.17%), Postives = 191/284 (67.25%), Query Frame = 0


Query: 30  SSSSSLSSSSSENELHETRNENAQSQSNENPSRELVIYNPSANDGRANDPVSTPVKQQPS 89
           S S ++  SSS N   E R EN           +LV+Y+   ND    + +  PV+ QP 
Sbjct: 4   SQSRAVQRSSSPN---EDRGEN-----------QLVVYDLKGNDDTEEEVL--PVQSQPL 63

Query: 90  PPLLGHLTPNSSRVLPSVGAFTVQCAGCFKWRLIPTKEKYEEIREHLLEQPFYCETAREW 149
                    +S    PS+GAFTVQCA CFKWRL+P+ +KYEEIRE LLE PF+C+TAREW
Sbjct: 64  ---------SSRTQCPSIGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREW 123

Query: 150 RPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYTAPSGKK 209
           +PDISCD PADI QDG+RLWAIDKPNI++PP GWQRLL IRGEG T+FADVYY APSGKK
Sbjct: 124 KPDISCDVPADIYQDGTRLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKK 183

Query: 210 LRSMVDIQKYLIEHPEYQTEGVSMTRFSFQIPKPLREDYVRKRRPNMNASCDGSKLE-SG 269
           LRS V++QKYL ++ EY  EGV +++FSFQIPKPL++DYVRKR   +  S D +    + 
Sbjct: 184 LRSTVEVQKYLNDNSEYIGEGVKLSQFSFQIPKPLQDDYVRKRPARLLDSIDNTNTPVAK 243

Query: 270 EVRPISWACPDDSTALQLGKPGLPELISTSPVDNPVTRPAKKVK 313
           E  P++W  PDD  +LQLG P      + S ++N   +P+KK K
Sbjct: 244 EANPLAWISPDDHISLQLGTP------TESGLNNSHYQPSKKKK 256

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BLAST of PI0005972 vs. ExPASy Swiss-Prot
Match: Q9FZP6 (Putative methyl-CpG-binding domain protein 12 OS=Arabidopsis thaliana OX=3702 GN=MBD12 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 9.4e-35
Identity = 73/141 (51.77%), Postives = 94/141 (66.67%), Query Frame = 0


Query: 112 VQCAGCFKWRLIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGSRLWAI 171
           VQC  C KWRLIP+ + Y  I+E  L+ PF C T   W P++SC+ P D T   +  W  
Sbjct: 2   VQCTDCKKWRLIPSMQHYNIIKETQLQTPFVCGTTSGWTPNMSCNVPQDGTTCDT--W-- 61

Query: 172 DKPNIAQPPPGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGV 231
             P+I   P GW R +HIR E STKFADVYY  PSG++LRS  ++Q +L  HPEY  EGV
Sbjct: 62  --PSIPPIPTGWSRSVHIRSE-STKFADVYYFPPSGERLRSSAEVQSFLDNHPEYVREGV 121

Query: 232 SMTRFSFQIPKPLREDYVRKR 253
           + ++FSFQIPKPL ++YV+KR
Sbjct: 122 NRSQFSFQIPKPLDDNYVKKR 135

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BLAST of PI0005972 vs. ExPASy Swiss-Prot
Match: Q9LYB9 (Methyl-CpG-binding domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=MBD4 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.2e-24
Identity = 54/140 (38.57%), Postives = 85/140 (60.71%), Query Frame = 0


Query: 107 VGAFTVQCAGCFKWRLIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGS 166
           +  +  QC  C KWR+I ++E+YE+IR  +LE PF C+     +  +SC++PADI  D S
Sbjct: 25  IDTYAAQCDNCHKWRVIDSQEEYEDIRSKMLEDPFNCQK----KQGMSCEEPADIDYDSS 84

Query: 167 RLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEY 226
           R W IDKP + + P G++R L +R + S    D YY  P+GKKLRS  +I  ++  +PE+
Sbjct: 85  RTWVIDKPGLPKTPKGFKRSLVLRKDYSK--MDTYYFTPTGKKLRSRNEIAAFVEANPEF 144

Query: 227 QTEGVSMTRFSFQIPKPLRE 247
           +     +  F+F +PK + +
Sbjct: 145 R--NAPLGDFNFTVPKVMED 156

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BLAST of PI0005972 vs. ExPASy Swiss-Prot
Match: Q5XEN5 (Methyl-CpG-binding domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=MBD1 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 3.4e-24
Identity = 54/141 (38.30%), Postives = 84/141 (59.57%), Query Frame = 0


Query: 106 SVGAFTVQCAGCFKWRLIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDG 165
           S+  F VQC  C KWR I T+++YE+IR  + E PF+C+T    +  +SC+D  D+  D 
Sbjct: 51  SIDVFAVQCEKCMKWRKIDTQDEYEDIRSRVQEDPFFCKT----KEGVSCEDVGDLNYDS 110

Query: 166 SRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPE 225
           SR W IDKP + + P G++R L +R + S    D YY  P+GKKL+S  +I  ++  + +
Sbjct: 111 SRTWVIDKPGLPRTPRGFKRSLILRKDYSK--MDAYYITPTGKKLKSRNEIAAFIDANQD 170

Query: 226 YQTEGVSMTRFSFQIPKPLRE 247
           Y+     +  F+F +PK + E
Sbjct: 171 YKY--ALLGDFNFTVPKVMEE 183

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BLAST of PI0005972 vs. ExPASy TrEMBL
Match: A0A0A0LHE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062680 PE=4 SV=1)

HSP 1 Score: 655.6 bits (1690), Expect = 1.1e-184
Identity = 328/343 (95.63%), Postives = 335/343 (97.67%), Query Frame = 0


Query: 1   MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSLSSSSSENELHETRNENAQSQSNENP 60
           MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSLSSSSSENELHETRNEN QSQSN+NP
Sbjct: 1   MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSLSSSSSENELHETRNENVQSQSNDNP 60

Query: 61  SRELVIYNPSANDGRANDPVSTPVKQQPSPPLLGHLTPNSSRVLPSVGAFTVQCAGCFKW 120
           SRELVIY+PSA+DG ANDPVSTPVKQQPS P+LGHLTPNSSRVLPSVGAFTVQCAGCFKW
Sbjct: 61  SRELVIYDPSADDGHANDPVSTPVKQQPS-PVLGHLTPNSSRVLPSVGAFTVQCAGCFKW 120

Query: 121 RLIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPP 180
           RLIPTKEKYEEIREHLLE+PFYCETAR WRPDISCDDPADITQDGSRLWAIDKPNIAQPP
Sbjct: 121 RLIPTKEKYEEIREHLLEKPFYCETARGWRPDISCDDPADITQDGSRLWAIDKPNIAQPP 180

Query: 181 PGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQI 240
           PGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQI
Sbjct: 181 PGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQI 240

Query: 241 PKPLREDYVRKRRPNMNASCDGSKLESGEVRPISWACPDDSTALQLGKPGLPELISTSPV 300
           PKPLREDYVRKRRPNMNASCD SKLESGEVRPISWA PDDSTALQLGKPGL EL+STSPV
Sbjct: 241 PKPLREDYVRKRRPNMNASCDASKLESGEVRPISWARPDDSTALQLGKPGLTELLSTSPV 300

Query: 301 DNPVTRPAKKVKRALAQEMRRSSLASTEPPAIKLERCFDQYEK 344
           +NPVTRPAKKVKRALAQEMRRSSL STEPPAIKLERCFDQYEK
Sbjct: 301 NNPVTRPAKKVKRALAQEMRRSSLTSTEPPAIKLERCFDQYEK 342

[Close]

BLAST of PI0005972 vs. ExPASy TrEMBL
Match: A0A5D3CST2 (Methyl-CpG-binding domain-containing protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2754G00130 PE=4 SV=1)

HSP 1 Score: 650.2 bits (1676), Expect = 4.8e-183
Identity = 327/343 (95.34%), Postives = 333/343 (97.08%), Query Frame = 0


Query: 1   MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSLSSSSSENELHETRNENAQSQSNENP 60
           MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSL SSSSENELHETRNEN QSQ NEN 
Sbjct: 1   MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSL-SSSSENELHETRNENVQSQPNENS 60

Query: 61  SRELVIYNPSANDGRANDPVSTPVKQQPSPPLLGHLTPNSSRVLPSVGAFTVQCAGCFKW 120
           SRELVIYNPSA DGRANDPV+TPVKQQPS PLLGHLTPNS+RVLPSVGAFTVQCAGCFKW
Sbjct: 61  SRELVIYNPSAKDGRANDPVATPVKQQPS-PLLGHLTPNSTRVLPSVGAFTVQCAGCFKW 120

Query: 121 RLIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPP 180
           RLIPTKEKYEEIREHLLEQPFYCETAREWRPDI+CDDPADITQDGSRLWAIDKPNIAQPP
Sbjct: 121 RLIPTKEKYEEIREHLLEQPFYCETAREWRPDITCDDPADITQDGSRLWAIDKPNIAQPP 180

Query: 181 PGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQI 240
           PGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQI
Sbjct: 181 PGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQI 240

Query: 241 PKPLREDYVRKRRPNMNASCDGSKLESGEVRPISWACPDDSTALQLGKPGLPELISTSPV 300
           PKPLREDYVRKRRPN+NASCD SKLESGEVRPISWA PDDSTALQLGKPGLPEL+STSPV
Sbjct: 241 PKPLREDYVRKRRPNINASCDASKLESGEVRPISWARPDDSTALQLGKPGLPELLSTSPV 300

Query: 301 DNPVTRPAKKVKRALAQEMRRSSLASTEPPAIKLERCFDQYEK 344
           D+PVTRPAKKVKRAL QEMRRSSLASTEPPAIKLE CFDQYEK
Sbjct: 301 DHPVTRPAKKVKRALGQEMRRSSLASTEPPAIKLEGCFDQYEK 341

[Close]

BLAST of PI0005972 vs. ExPASy TrEMBL
Match: A0A1S3BR32 (methyl-CpG-binding domain-containing protein 2-like OS=Cucumis melo OX=3656 GN=LOC103492271 PE=4 SV=1)

HSP 1 Score: 650.2 bits (1676), Expect = 4.8e-183
Identity = 327/343 (95.34%), Postives = 333/343 (97.08%), Query Frame = 0


Query: 1   MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSLSSSSSENELHETRNENAQSQSNENP 60
           MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSL SSSSENELHETRNEN QSQ NEN 
Sbjct: 1   MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSL-SSSSENELHETRNENVQSQPNENS 60

Query: 61  SRELVIYNPSANDGRANDPVSTPVKQQPSPPLLGHLTPNSSRVLPSVGAFTVQCAGCFKW 120
           SRELVIYNPSA DGRANDPV+TPVKQQPS PLLGHLTPNS+RVLPSVGAFTVQCAGCFKW
Sbjct: 61  SRELVIYNPSAKDGRANDPVATPVKQQPS-PLLGHLTPNSTRVLPSVGAFTVQCAGCFKW 120

Query: 121 RLIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPP 180
           RLIPTKEKYEEIREHLLEQPFYCETAREWRPDI+CDDPADITQDGSRLWAIDKPNIAQPP
Sbjct: 121 RLIPTKEKYEEIREHLLEQPFYCETAREWRPDITCDDPADITQDGSRLWAIDKPNIAQPP 180

Query: 181 PGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQI 240
           PGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQI
Sbjct: 181 PGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQI 240

Query: 241 PKPLREDYVRKRRPNMNASCDGSKLESGEVRPISWACPDDSTALQLGKPGLPELISTSPV 300
           PKPLREDYVRKRRPN+NASCD SKLESGEVRPISWA PDDSTALQLGKPGLPEL+STSPV
Sbjct: 241 PKPLREDYVRKRRPNINASCDASKLESGEVRPISWARPDDSTALQLGKPGLPELLSTSPV 300

Query: 301 DNPVTRPAKKVKRALAQEMRRSSLASTEPPAIKLERCFDQYEK 344
           D+PVTRPAKKVKRAL QEMRRSSLASTEPPAIKLE CFDQYEK
Sbjct: 301 DHPVTRPAKKVKRALGQEMRRSSLASTEPPAIKLEGCFDQYEK 341

[Close]

BLAST of PI0005972 vs. ExPASy TrEMBL
Match: A0A6J1EN70 (methyl-CpG-binding domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111436133 PE=4 SV=1)

HSP 1 Score: 569.7 bits (1467), Expect = 8.2e-159
Identity = 292/344 (84.88%), Postives = 314/344 (91.28%), Query Frame = 0


Query: 1   MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSLSSSSSENELHETRNENAQSQSNENP 60
           MVGGEENDLNEPSLSN QET +QDVIAVSSSSSS SSSSSE+ELHETRNEN QSQSNEN 
Sbjct: 1   MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV 60

Query: 61  SRELVIYNPSAND-GRANDPVSTPVKQQPSPPLLGHLTPNSSRVLPSVGAFTVQCAGCFK 120
           SRELV+YNPSAND G A++PVSTPV+ Q  PPLLGHLTPNSSRVL  VGAFTVQCA CFK
Sbjct: 61  SRELVLYNPSANDEGGAHEPVSTPVRHQ-RPPLLGHLTPNSSRVL-RVGAFTVQCASCFK 120

Query: 121 WRLIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQP 180
           WRLIPTKEKYEEIREHLLE+PFYCETAREWRPDISC+DPADITQD  RLWAIDKPNIAQP
Sbjct: 121 WRLIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQP 180

Query: 181 PPGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQ 240
           PPGWQRLLHIRGEGSTKFADVYY APSGK+LRSMVDIQKYLIEHPEYQTEGV MTRFSFQ
Sbjct: 181 PPGWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQ 240

Query: 241 IPKPLREDYVRKRRPNMNASCDGSKLESGEVRPISWACPDDSTALQLGKPGLPELISTSP 300
            PKPL+E+YVRKRR NMNASCDGSKLESGEV PISWA PD+STALQLG+PGL EL  T+P
Sbjct: 241 TPKPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRPGLSELFPTAP 300

Query: 301 VDNPVTRPAKKVKRALAQEMRRSSLASTEPPAIKLERCFDQYEK 344
           VDN V++PAKK KRA+A+EM RSSLASTEPP + LER F++Y+K
Sbjct: 301 VDNRVSQPAKKAKRAVAKEM-RSSLASTEPPDLSLERYFNEYKK 341

[Close]

BLAST of PI0005972 vs. ExPASy TrEMBL
Match: A0A6J1K3E0 (methyl-CpG-binding domain-containing protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111492010 PE=4 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 2.7e-157
Identity = 289/344 (84.01%), Postives = 311/344 (90.41%), Query Frame = 0


Query: 1   MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSLSSSSSENELHETRNENAQSQSNENP 60
           MVGGEENDLNEPSLSN QET +QDVIAVSSSSSS SSSSSE+ELHETRNEN QSQSNEN 
Sbjct: 1   MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV 60

Query: 61  SRELVIYNPSAND-GRANDPVSTPVKQQPSPPLLGHLTPNSSRVLPSVGAFTVQCAGCFK 120
           SRELV+YNPSAND G A++PVSTPV+ Q  PPLLGHLTPNSSRVL  VGAFTVQCA CFK
Sbjct: 61  SRELVLYNPSANDEGGAHEPVSTPVRHQ-RPPLLGHLTPNSSRVL-RVGAFTVQCASCFK 120

Query: 121 WRLIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQP 180
           WRLIPTKEKYEEIREHLLE+PFYCETAREWRPDISC+DPADITQD  RLWAIDKPNIAQP
Sbjct: 121 WRLIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQP 180

Query: 181 PPGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQ 240
           PPGWQRLLHIRGEGSTKFADVYY APSGK+LRSMVDIQKYLIEHPEYQTEGV MTRFSFQ
Sbjct: 181 PPGWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQ 240

Query: 241 IPKPLREDYVRKRRPNMNASCDGSKLESGEVRPISWACPDDSTALQLGKPGLPELISTSP 300
            PKPL+E+YVRKRR NMNASCDGSKLESGEV PISWA PD+ST LQLG+PGL EL  T+P
Sbjct: 241 TPKPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTGLQLGRPGLSELFPTAP 300

Query: 301 VDNPVTRPAKKVKRALAQEMRRSSLASTEPPAIKLERCFDQYEK 344
           VDN V++PAKK KRA+ +EM  SSLASTEPP + LER F++Y+K
Sbjct: 301 VDNRVSQPAKKAKRAVTKEM-HSSLASTEPPDLSLERYFNEYKK 341

[Close]

BLAST of PI0005972 vs. NCBI nr
Match: XP_004150390.1 (methyl-CpG-binding domain-containing protein 2 [Cucumis sativus] >XP_031737021.1 methyl-CpG-binding domain-containing protein 2 [Cucumis sativus] >KGN61193.1 hypothetical protein Csa_006529 [Cucumis sativus])

HSP 1 Score: 655.6 bits (1690), Expect = 2.4e-184
Identity = 328/343 (95.63%), Postives = 335/343 (97.67%), Query Frame = 0


Query: 1   MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSLSSSSSENELHETRNENAQSQSNENP 60
           MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSLSSSSSENELHETRNEN QSQSN+NP
Sbjct: 1   MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSLSSSSSENELHETRNENVQSQSNDNP 60

Query: 61  SRELVIYNPSANDGRANDPVSTPVKQQPSPPLLGHLTPNSSRVLPSVGAFTVQCAGCFKW 120
           SRELVIY+PSA+DG ANDPVSTPVKQQPS P+LGHLTPNSSRVLPSVGAFTVQCAGCFKW
Sbjct: 61  SRELVIYDPSADDGHANDPVSTPVKQQPS-PVLGHLTPNSSRVLPSVGAFTVQCAGCFKW 120

Query: 121 RLIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPP 180
           RLIPTKEKYEEIREHLLE+PFYCETAR WRPDISCDDPADITQDGSRLWAIDKPNIAQPP
Sbjct: 121 RLIPTKEKYEEIREHLLEKPFYCETARGWRPDISCDDPADITQDGSRLWAIDKPNIAQPP 180

Query: 181 PGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQI 240
           PGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQI
Sbjct: 181 PGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQI 240

Query: 241 PKPLREDYVRKRRPNMNASCDGSKLESGEVRPISWACPDDSTALQLGKPGLPELISTSPV 300
           PKPLREDYVRKRRPNMNASCD SKLESGEVRPISWA PDDSTALQLGKPGL EL+STSPV
Sbjct: 241 PKPLREDYVRKRRPNMNASCDASKLESGEVRPISWARPDDSTALQLGKPGLTELLSTSPV 300

Query: 301 DNPVTRPAKKVKRALAQEMRRSSLASTEPPAIKLERCFDQYEK 344
           +NPVTRPAKKVKRALAQEMRRSSL STEPPAIKLERCFDQYEK
Sbjct: 301 NNPVTRPAKKVKRALAQEMRRSSLTSTEPPAIKLERCFDQYEK 342

[Close]

BLAST of PI0005972 vs. NCBI nr
Match: XP_008450795.1 (PREDICTED: methyl-CpG-binding domain-containing protein 2-like [Cucumis melo] >KAA0047569.1 methyl-CpG-binding domain-containing protein 2-like [Cucumis melo var. makuwa] >TYK14963.1 methyl-CpG-binding domain-containing protein 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 650.2 bits (1676), Expect = 9.9e-183
Identity = 327/343 (95.34%), Postives = 333/343 (97.08%), Query Frame = 0


Query: 1   MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSLSSSSSENELHETRNENAQSQSNENP 60
           MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSL SSSSENELHETRNEN QSQ NEN 
Sbjct: 1   MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSL-SSSSENELHETRNENVQSQPNENS 60

Query: 61  SRELVIYNPSANDGRANDPVSTPVKQQPSPPLLGHLTPNSSRVLPSVGAFTVQCAGCFKW 120
           SRELVIYNPSA DGRANDPV+TPVKQQPS PLLGHLTPNS+RVLPSVGAFTVQCAGCFKW
Sbjct: 61  SRELVIYNPSAKDGRANDPVATPVKQQPS-PLLGHLTPNSTRVLPSVGAFTVQCAGCFKW 120

Query: 121 RLIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPP 180
           RLIPTKEKYEEIREHLLEQPFYCETAREWRPDI+CDDPADITQDGSRLWAIDKPNIAQPP
Sbjct: 121 RLIPTKEKYEEIREHLLEQPFYCETAREWRPDITCDDPADITQDGSRLWAIDKPNIAQPP 180

Query: 181 PGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQI 240
           PGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQI
Sbjct: 181 PGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQI 240

Query: 241 PKPLREDYVRKRRPNMNASCDGSKLESGEVRPISWACPDDSTALQLGKPGLPELISTSPV 300
           PKPLREDYVRKRRPN+NASCD SKLESGEVRPISWA PDDSTALQLGKPGLPEL+STSPV
Sbjct: 241 PKPLREDYVRKRRPNINASCDASKLESGEVRPISWARPDDSTALQLGKPGLPELLSTSPV 300

Query: 301 DNPVTRPAKKVKRALAQEMRRSSLASTEPPAIKLERCFDQYEK 344
           D+PVTRPAKKVKRAL QEMRRSSLASTEPPAIKLE CFDQYEK
Sbjct: 301 DHPVTRPAKKVKRALGQEMRRSSLASTEPPAIKLEGCFDQYEK 341

[Close]

BLAST of PI0005972 vs. NCBI nr
Match: XP_038890273.1 (methyl-CpG-binding domain-containing protein 2 isoform X1 [Benincasa hispida] >XP_038890274.1 methyl-CpG-binding domain-containing protein 2 isoform X1 [Benincasa hispida] >XP_038890275.1 methyl-CpG-binding domain-containing protein 2 isoform X1 [Benincasa hispida] >XP_038890276.1 methyl-CpG-binding domain-containing protein 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 616.3 bits (1588), Expect = 1.6e-172
Identity = 313/357 (87.68%), Postives = 325/357 (91.04%), Query Frame = 0


Query: 1   MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSLSSSSSENELHETRNE---------- 60
           MVGGEENDLNEPSLSN QETPRQDV AVSS SSSLSSSS ENELHE RNE          
Sbjct: 1   MVGGEENDLNEPSLSNGQETPRQDVRAVSSFSSSLSSSSFENELHEPRNENAQSQSNENP 60

Query: 61  ----NAQSQSNENPSRELVIYNPSANDGRANDPVSTPVKQQPSPPLLGHLTPNSSRVLPS 120
               NAQSQSNENPSRELV+Y+ SANDG AN+PVSTPV+ Q  PPLLGHLTPNSSRVLPS
Sbjct: 61  SRNKNAQSQSNENPSRELVLYDSSANDGGANEPVSTPVEHQ-RPPLLGHLTPNSSRVLPS 120

Query: 121 VGAFTVQCAGCFKWRLIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGS 180
           VGAFTVQCA CFKWRLIPTKEKYEEIREHLLE+PFYCETAREWRPDISCDDPADITQDGS
Sbjct: 121 VGAFTVQCASCFKWRLIPTKEKYEEIREHLLEKPFYCETAREWRPDISCDDPADITQDGS 180

Query: 181 RLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEY 240
           RLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYY APSGKKLRSMVDIQKYLIEHPEY
Sbjct: 181 RLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYIAPSGKKLRSMVDIQKYLIEHPEY 240

Query: 241 QTEGVSMTRFSFQIPKPLREDYVRKRRPNMNASCDGSKLESGEVRPISWACPDDSTALQL 300
           QTEGVSMTRFSFQIPKPLRE+YVRKRRPNMNASCDGSKLESG V PISWA PDDSTALQL
Sbjct: 241 QTEGVSMTRFSFQIPKPLRENYVRKRRPNMNASCDGSKLESGGVHPISWARPDDSTALQL 300

Query: 301 GKPGLPELISTSPVDNPVTRPAKKVKRALAQEMRRSSLASTEPPAIKLERCFDQYEK 344
           GKPGL EL+ T+PVDNP+TRP KKVKRALA+EMRRSSLASTEPPA+KLERCFD+YEK
Sbjct: 301 GKPGLSELLLTAPVDNPITRPVKKVKRALAREMRRSSLASTEPPAVKLERCFDKYEK 356

[Close]

BLAST of PI0005972 vs. NCBI nr
Match: XP_022929597.1 (methyl-CpG-binding domain-containing protein 2-like [Cucurbita moschata] >XP_022929598.1 methyl-CpG-binding domain-containing protein 2-like [Cucurbita moschata])

HSP 1 Score: 569.7 bits (1467), Expect = 1.7e-158
Identity = 292/344 (84.88%), Postives = 314/344 (91.28%), Query Frame = 0


Query: 1   MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSLSSSSSENELHETRNENAQSQSNENP 60
           MVGGEENDLNEPSLSN QET +QDVIAVSSSSSS SSSSSE+ELHETRNEN QSQSNEN 
Sbjct: 1   MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV 60

Query: 61  SRELVIYNPSAND-GRANDPVSTPVKQQPSPPLLGHLTPNSSRVLPSVGAFTVQCAGCFK 120
           SRELV+YNPSAND G A++PVSTPV+ Q  PPLLGHLTPNSSRVL  VGAFTVQCA CFK
Sbjct: 61  SRELVLYNPSANDEGGAHEPVSTPVRHQ-RPPLLGHLTPNSSRVL-RVGAFTVQCASCFK 120

Query: 121 WRLIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQP 180
           WRLIPTKEKYEEIREHLLE+PFYCETAREWRPDISC+DPADITQD  RLWAIDKPNIAQP
Sbjct: 121 WRLIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQP 180

Query: 181 PPGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQ 240
           PPGWQRLLHIRGEGSTKFADVYY APSGK+LRSMVDIQKYLIEHPEYQTEGV MTRFSFQ
Sbjct: 181 PPGWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQ 240

Query: 241 IPKPLREDYVRKRRPNMNASCDGSKLESGEVRPISWACPDDSTALQLGKPGLPELISTSP 300
            PKPL+E+YVRKRR NMNASCDGSKLESGEV PISWA PD+STALQLG+PGL EL  T+P
Sbjct: 241 TPKPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRPGLSELFPTAP 300

Query: 301 VDNPVTRPAKKVKRALAQEMRRSSLASTEPPAIKLERCFDQYEK 344
           VDN V++PAKK KRA+A+EM RSSLASTEPP + LER F++Y+K
Sbjct: 301 VDNRVSQPAKKAKRAVAKEM-RSSLASTEPPDLSLERYFNEYKK 341

[Close]

BLAST of PI0005972 vs. NCBI nr
Match: XP_023546682.1 (methyl-CpG-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo] >XP_023546683.1 methyl-CpG-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 568.2 bits (1463), Expect = 5.0e-158
Identity = 291/344 (84.59%), Postives = 313/344 (90.99%), Query Frame = 0


Query: 1   MVGGEENDLNEPSLSNDQETPRQDVIAVSSSSSSLSSSSSENELHETRNENAQSQSNENP 60
           MVGGEENDLNEPSLSN QET +QDVIAVSSSSSS SSSSSE+ELHETRNEN QSQSNEN 
Sbjct: 1   MVGGEENDLNEPSLSNHQETTQQDVIAVSSSSSSFSSSSSESELHETRNENVQSQSNENV 60

Query: 61  SRELVIYNPSAND-GRANDPVSTPVKQQPSPPLLGHLTPNSSRVLPSVGAFTVQCAGCFK 120
           SRELV+YNPSAND G A++PVSTPV+ Q  PPLLGHLTPNSSRVL  VGAFTVQCA CFK
Sbjct: 61  SRELVLYNPSANDEGGAHEPVSTPVRHQ-RPPLLGHLTPNSSRVL-RVGAFTVQCASCFK 120

Query: 121 WRLIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQP 180
           WRLIPTKEKYEEIREHLLE+PFYCETAREWRPDISC+DPADITQD  RLWAIDKPNIAQP
Sbjct: 121 WRLIPTKEKYEEIREHLLEEPFYCETAREWRPDISCNDPADITQDDGRLWAIDKPNIAQP 180

Query: 181 PPGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGVSMTRFSFQ 240
           PPGWQRLLHIRGEGSTKFADVYY APSGK+LRSMVDIQKYLIEHPEYQTEGV MTRFSFQ
Sbjct: 181 PPGWQRLLHIRGEGSTKFADVYYIAPSGKRLRSMVDIQKYLIEHPEYQTEGVCMTRFSFQ 240

Query: 241 IPKPLREDYVRKRRPNMNASCDGSKLESGEVRPISWACPDDSTALQLGKPGLPELISTSP 300
            PKPL+E+YVRKRR NMNASCDGSKLESGEV PISWA PD+STALQLG+PGL EL  T+P
Sbjct: 241 TPKPLQENYVRKRRANMNASCDGSKLESGEVYPISWARPDNSTALQLGRPGLSELFPTAP 300

Query: 301 VDNPVTRPAKKVKRALAQEMRRSSLASTEPPAIKLERCFDQYEK 344
           VDN  ++PAKK KRA+A+EM RSSLASTEPP + LER F++Y+K
Sbjct: 301 VDNRASQPAKKAKRAVAKEM-RSSLASTEPPDLSLERYFNEYKK 341

[Close]

BLAST of PI0005972 vs. TAIR 10
Match: AT5G35330.1 (methyl-CPG-binding domain protein 02 )

HSP 1 Score: 280.4 bits (716), Expect = 1.9e-75
Identity = 151/284 (53.17%), Postives = 191/284 (67.25%), Query Frame = 0


Query: 30  SSSSSLSSSSSENELHETRNENAQSQSNENPSRELVIYNPSANDGRANDPVSTPVKQQPS 89
           S S ++  SSS N   E R EN           +LV+Y+   ND    + +  PV+ QP 
Sbjct: 4   SQSRAVQRSSSPN---EDRGEN-----------QLVVYDLKGNDDTEEEVL--PVQSQPL 63

Query: 90  PPLLGHLTPNSSRVLPSVGAFTVQCAGCFKWRLIPTKEKYEEIREHLLEQPFYCETAREW 149
                    +S    PS+GAFTVQCA CFKWRL+P+ +KYEEIRE LLE PF+C+TAREW
Sbjct: 64  ---------SSRTQCPSIGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREW 123

Query: 150 RPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYTAPSGKK 209
           +PDISCD PADI QDG+RLWAIDKPNI++PP GWQRLL IRGEG T+FADVYY APSGKK
Sbjct: 124 KPDISCDVPADIYQDGTRLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKK 183

Query: 210 LRSMVDIQKYLIEHPEYQTEGVSMTRFSFQIPKPLREDYVRKRRPNMNASCDGSKLE-SG 269
           LRS V++QKYL ++ EY  EGV +++FSFQIPKPL++DYVRKR   +  S D +    + 
Sbjct: 184 LRSTVEVQKYLNDNSEYIGEGVKLSQFSFQIPKPLQDDYVRKRPARLLDSIDNTNTPVAK 243

Query: 270 EVRPISWACPDDSTALQLGKPGLPELISTSPVDNPVTRPAKKVK 313
           E  P++W  PDD  +LQLG P      + S ++N   +P+KK K
Sbjct: 244 EANPLAWISPDDHISLQLGTP------TESGLNNSHYQPSKKKK 256

[Close]

BLAST of PI0005972 vs. TAIR 10
Match: AT5G35330.2 (methyl-CPG-binding domain protein 02 )

HSP 1 Score: 280.4 bits (716), Expect = 1.9e-75
Identity = 151/284 (53.17%), Postives = 191/284 (67.25%), Query Frame = 0


Query: 30  SSSSSLSSSSSENELHETRNENAQSQSNENPSRELVIYNPSANDGRANDPVSTPVKQQPS 89
           S S ++  SSS N   E R EN           +LV+Y+   ND    + +  PV+ QP 
Sbjct: 4   SQSRAVQRSSSPN---EDRGEN-----------QLVVYDLKGNDDTEEEVL--PVQSQPL 63

Query: 90  PPLLGHLTPNSSRVLPSVGAFTVQCAGCFKWRLIPTKEKYEEIREHLLEQPFYCETAREW 149
                    +S    PS+GAFTVQCA CFKWRL+P+ +KYEEIRE LLE PF+C+TAREW
Sbjct: 64  ---------SSRTQCPSIGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREW 123

Query: 150 RPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYTAPSGKK 209
           +PDISCD PADI QDG+RLWAIDKPNI++PP GWQRLL IRGEG T+FADVYY APSGKK
Sbjct: 124 KPDISCDVPADIYQDGTRLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKK 183

Query: 210 LRSMVDIQKYLIEHPEYQTEGVSMTRFSFQIPKPLREDYVRKRRPNMNASCDGSKLE-SG 269
           LRS V++QKYL ++ EY  EGV +++FSFQIPKPL++DYVRKR   +  S D +    + 
Sbjct: 184 LRSTVEVQKYLNDNSEYIGEGVKLSQFSFQIPKPLQDDYVRKRPARLLDSIDNTNTPVAK 243

Query: 270 EVRPISWACPDDSTALQLGKPGLPELISTSPVDNPVTRPAKKVK 313
           E  P++W  PDD  +LQLG P      + S ++N   +P+KK K
Sbjct: 244 EANPLAWISPDDHISLQLGTP------TESGLNNSHYQPSKKKK 256

[Close]

BLAST of PI0005972 vs. TAIR 10
Match: AT5G35330.3 (methyl-CPG-binding domain protein 02 )

HSP 1 Score: 280.4 bits (716), Expect = 1.9e-75
Identity = 151/284 (53.17%), Postives = 191/284 (67.25%), Query Frame = 0


Query: 30  SSSSSLSSSSSENELHETRNENAQSQSNENPSRELVIYNPSANDGRANDPVSTPVKQQPS 89
           S S ++  SSS N   E R EN           +LV+Y+   ND    + +  PV+ QP 
Sbjct: 4   SQSRAVQRSSSPN---EDRGEN-----------QLVVYDLKGNDDTEEEVL--PVQSQPL 63

Query: 90  PPLLGHLTPNSSRVLPSVGAFTVQCAGCFKWRLIPTKEKYEEIREHLLEQPFYCETAREW 149
                    +S    PS+GAFTVQCA CFKWRL+P+ +KYEEIRE LLE PF+C+TAREW
Sbjct: 64  ---------SSRTQCPSIGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCDTAREW 123

Query: 150 RPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYTAPSGKK 209
           +PDISCD PADI QDG+RLWAIDKPNI++PP GWQRLL IRGEG T+FADVYY APSGKK
Sbjct: 124 KPDISCDVPADIYQDGTRLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVAPSGKK 183

Query: 210 LRSMVDIQKYLIEHPEYQTEGVSMTRFSFQIPKPLREDYVRKRRPNMNASCDGSKLE-SG 269
           LRS V++QKYL ++ EY  EGV +++FSFQIPKPL++DYVRKR   +  S D +    + 
Sbjct: 184 LRSTVEVQKYLNDNSEYIGEGVKLSQFSFQIPKPLQDDYVRKRPARLLDSIDNTNTPVAK 243

Query: 270 EVRPISWACPDDSTALQLGKPGLPELISTSPVDNPVTRPAKKVK 313
           E  P++W  PDD  +LQLG P      + S ++N   +P+KK K
Sbjct: 244 EANPLAWISPDDHISLQLGTP------TESGLNNSHYQPSKKKK 256

[Close]

BLAST of PI0005972 vs. TAIR 10
Match: AT5G35338.2 (methyl-CPG-binding domain 12 )

HSP 1 Score: 149.1 bits (375), Expect = 6.7e-36
Identity = 73/141 (51.77%), Postives = 94/141 (66.67%), Query Frame = 0


Query: 112 VQCAGCFKWRLIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGSRLWAI 171
           VQC  C KWRLIP+ + Y  I+E  L+ PF C T   W P++SC+ P D T   +  W  
Sbjct: 2   VQCTDCKKWRLIPSMQHYNIIKETQLQTPFVCGTTSGWTPNMSCNVPQDGTTCDT--W-- 61

Query: 172 DKPNIAQPPPGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEYQTEGV 231
             P+I   P GW R +HIR E STKFADVYY  PSG++LRS  ++Q +L  HPEY  EGV
Sbjct: 62  --PSIPPIPTGWSRSVHIRSE-STKFADVYYFPPSGERLRSSAEVQSFLDNHPEYVREGV 121

Query: 232 SMTRFSFQIPKPLREDYVRKR 253
           + ++FSFQIPKPL ++YV+KR
Sbjct: 122 NRSQFSFQIPKPLDDNYVKKR 135

[Close]

BLAST of PI0005972 vs. TAIR 10
Match: AT3G63030.1 (methyl-CPG-binding domain 4 )

HSP 1 Score: 115.5 bits (288), Expect = 8.2e-26
Identity = 54/140 (38.57%), Postives = 85/140 (60.71%), Query Frame = 0


Query: 107 VGAFTVQCAGCFKWRLIPTKEKYEEIREHLLEQPFYCETAREWRPDISCDDPADITQDGS 166
           +  +  QC  C KWR+I ++E+YE+IR  +LE PF C+     +  +SC++PADI  D S
Sbjct: 25  IDTYAAQCDNCHKWRVIDSQEEYEDIRSKMLEDPFNCQK----KQGMSCEEPADIDYDSS 84

Query: 167 RLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYTAPSGKKLRSMVDIQKYLIEHPEY 226
           R W IDKP + + P G++R L +R + S    D YY  P+GKKLRS  +I  ++  +PE+
Sbjct: 85  RTWVIDKPGLPKTPKGFKRSLVLRKDYSK--MDTYYFTPTGKKLRSRNEIAAFVEANPEF 144

Query: 227 QTEGVSMTRFSFQIPKPLRE 247
           +     +  F+F +PK + +
Sbjct: 145 R--NAPLGDFNFTVPKVMED 156

The following BLAST results are available for this feature:

BLAST of PI0005972 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LA53	2.7e-74	53.17	Methyl-CpG-binding domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9FZP6	9.4e-35	51.77	Putative methyl-CpG-binding domain protein 12 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LYB9	1.2e-24	38.57	Methyl-CpG-binding domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q5XEN5	3.4e-24	38.30	Methyl-CpG-binding domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of PI0005972 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHE0	1.1e-184	95.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062680 PE=4 SV=1	[more]
A0A5D3CST2	4.8e-183	95.34	Methyl-CpG-binding domain-containing protein 2-like OS=Cucumis melo var. makuwa ...	[more]
A0A1S3BR32	4.8e-183	95.34	methyl-CpG-binding domain-containing protein 2-like OS=Cucumis melo OX=3656 GN=L...	[more]
A0A6J1EN70	8.2e-159	84.88	methyl-CpG-binding domain-containing protein 2-like OS=Cucurbita moschata OX=366...	[more]
A0A6J1K3E0	2.7e-157	84.01	methyl-CpG-binding domain-containing protein 2-like OS=Cucurbita maxima OX=3661 ...	[more]

BLAST of PI0005972 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150390.1	2.4e-184	95.63	methyl-CpG-binding domain-containing protein 2 [Cucumis sativus] >XP_031737021.1...	[more]
XP_008450795.1	9.9e-183	95.34	PREDICTED: methyl-CpG-binding domain-containing protein 2-like [Cucumis melo] >K...	[more]
XP_038890273.1	1.6e-172	87.68	methyl-CpG-binding domain-containing protein 2 isoform X1 [Benincasa hispida] >X...	[more]
XP_022929597.1	1.7e-158	84.88	methyl-CpG-binding domain-containing protein 2-like [Cucurbita moschata] >XP_022...	[more]
XP_023546682.1	5.0e-158	84.59	methyl-CpG-binding domain-containing protein 2-like [Cucurbita pepo subsp. pepo]...	[more]

BLAST of PI0005972 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35330.1	1.9e-75	53.17	methyl-CPG-binding domain protein 02	[more]
AT5G35330.2	1.9e-75	53.17	methyl-CPG-binding domain protein 02	[more]
AT5G35330.3	1.9e-75	53.17	methyl-CPG-binding domain protein 02	[more]
AT5G35338.2	6.7e-36	51.77	methyl-CPG-binding domain 12	[more]
AT3G63030.1	8.2e-26	38.57	methyl-CPG-binding domain 4	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001739	Methyl-CpG DNA binding	SMART	SM00391	TAM_2	coord: 173..248 e-value: 4.7E-5 score: 32.4
IPR001739	Methyl-CpG DNA binding	PFAM	PF01429	MBD	coord: 180..239 e-value: 2.4E-10 score: 40.0
IPR001739	Methyl-CpG DNA binding	PROSITE	PS50982	MBD	coord: 169..243 score: 16.711006
None	No IPR available	GENE3D	3.30.890.10		coord: 163..270 e-value: 1.5E-19 score: 72.2
None	No IPR available	GENE3D	3.30.40.100		coord: 108..162 e-value: 1.2E-5 score: 26.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..97
None	No IPR available	PANTHER	PTHR12396	METHYL-CPG BINDING PROTEIN, MBD	coord: 28..289
None	No IPR available	PANTHER	PTHR12396:SF41	ZINC FINGER, CW-TYPE, DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 28..289
None	No IPR available	CDD	cd01396	MeCP2_MBD	coord: 173..252 e-value: 2.1628E-26 score: 98.2136
IPR011124	Zinc finger, CW-type	PFAM	PF07496	zf-CW	coord: 110..160 e-value: 2.0E-12 score: 46.9
IPR011124	Zinc finger, CW-type	PROSITE	PS51050	ZF_CW	coord: 104..163 score: 12.551763
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 148..254

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0005972.1	PI0005972.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008270	zinc ion binding