Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTAGTGATCTCAGCTTCTGTACTCTCAGCAATGGTGTTTTACTCTTCTCTACTCCCTTTTCTCCATTCTTTAAACCTTTATATCTCTTCAACAATCCACAAAAACTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATCGTTCGAAATTCCGGTCTTATCGGCAACGCCAGCGACGAACAGAGCGCCGGAAATGAAGCTTTCGGGGCTGCAACAATGGCTGATGGGAACAGAAAAATTGAGAGCAAAGTTGAAATTGAAGAAGAAAGGGAAAATGGGTTGGTTGTAAATGAAGAAAAAATTGAAAATTTGATCACAGATAATGAAGATGAAGAAGAAAGATCCGATTTTATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAATTGATGAAGAATTGAATAAGAAATGTGAAGAATTTATTAGAAAAGTTAAGGCAGGAATTAAATTTGAATCACAGCAATTGTTTATATTGTAA
mRNA sequence
ATGAAGTTAGTGATCTCAGCTTCTGTACTCTCAGCAATGGTGTTTTACTCTTCTCTACTCCCTTTTCTCCATTCTTTAAACCTTTATATCTCTTCAACAATCCACAAAAACTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATCGTTCGAAATTCCGGTCTTATCGGCAACGCCAGCGACGAACAGAGCGCCGGAAATGAAGCTTTCGGGGCTGCAACAATGGCTGATGGGAACAGAAAAATTGAGAGCAAAGTTGAAATTGAAGAAGAAAGGGAAAATGGGTTGGTTATCCGATTTTATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAATTGATGAAGAATTGAATAAGAAATGTGAAGAATTTATTAGAAAAGTTAAGGCAGGAATTAAATTTGAATCACAGCAATTGTTTATATTGTAA
Coding sequence (CDS)
ATGAAGTTAGTGATCTCAGCTTCTGTACTCTCAGCAATGGTGTTTTACTCTTCTCTACTCCCTTTTCTCCATTCTTTAAACCTTTATATCTCTTCAACAATCCACAAAAACTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATCGTTCGAAATTCCGGTCTTATCGGCAACGCCAGCGACGAACAGAGCGCCGGAAATGAAGCTTTCGGGGCTGCAACAATGGCTGATGGGAACAGAAAAATTGAGAGCAAAGTTGAAATTGAAGAAGAAAGGGAAAATGGGTTGGTTATCCGATTTTATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAATTGATGAAGAATTGAATAAGAAATGTGAAGAATTTATTAGAAAAGTTAAGGCAGGAATTAAATTTGAATCACAGCAATTGTTTATATTGTAA
Protein sequence
MKLVISASVLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNASDEQSAGNEAFGAATMADGNRKIESKVEIEEERENGLVIRFYEEEEEEEEEEEIDEELNKKCEEFIRKVKAGIKFESQQLFIL
Homology
BLAST of PI0005737 vs. ExPASy TrEMBL
Match:
A0A0A0K349 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G032240 PE=4 SV=1)
HSP 1 Score: 218.8 bits (556), Expect = 1.5e-53
Identity = 131/158 (82.91%), Postives = 136/158 (86.08%), Query Frame = 0
Query: 1 MKLVISASVLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNA 60
MKLVISAS+LSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGN
Sbjct: 1 MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT 60
Query: 61 SDEQSAGNEAFGAATMADGNRKIESKVEIEEERENGLVI-----------RFYEEEE--- 120
SDE+S+GNEA GAATMADGNRKIESKVEIEEER NGLV+ EEE
Sbjct: 61 SDERSSGNEALGAATMADGNRKIESKVEIEEERGNGLVVNEDKIENLITDNEVEEERFMS 120
Query: 121 -EEEEEEEIDEELNKKCEEFIRKVKAGIKFESQQLFIL 144
EEEEEEEIDEELNKKCEEFIRK+KAGIKFESQQLFIL
Sbjct: 121 YEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 158
BLAST of PI0005737 vs. ExPASy TrEMBL
Match:
A0A1S3CG16 (gem-associated protein 2-like OS=Cucumis melo OX=3656 GN=LOC103500515 PE=4 SV=1)
HSP 1 Score: 194.1 bits (492), Expect = 3.9e-46
Identity = 119/159 (74.84%), Postives = 124/159 (77.99%), Query Frame = 0
Query: 13 MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNASDEQSAGNEAFG 72
MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGN +EQS+ NEA G
Sbjct: 1 MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTCNEQSSRNEALG 60
Query: 73 AATMADGNRKIESK--VEIEEERENGLVI-----------------RFY---------EE 132
A TMADGNRKIESK VE+EEER NGLV+ RF EE
Sbjct: 61 AVTMADGNRKIESKVEVEVEEERRNGLVVNEEKFENLITDNEDEEERFISYEEEEEEEEE 120
Query: 133 EEEEEEEEEIDEELNKKCEEFIRKVKAGIKFESQQLFIL 144
EEEEEEEEEIDEELNKKCEEFIRK+KAGIKFESQQLFIL
Sbjct: 121 EEEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 159
BLAST of PI0005737 vs. ExPASy TrEMBL
Match:
A0A6J1EJY9 (uncharacterized protein LOC111435260 OS=Cucurbita moschata OX=3662 GN=LOC111435260 PE=4 SV=1)
HSP 1 Score: 161.4 bits (407), Expect = 2.8e-36
Identity = 104/160 (65.00%), Postives = 122/160 (76.25%), Query Frame = 0
Query: 1 MKLVISASVLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNA 60
MKL+ISAS+LSAMVFYSSLLPFLHS NLYIS+T HKNYMFLLCNGLLVFIVRNSGLI +
Sbjct: 1 MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCS 60
Query: 61 SDEQSAGNEAFGA----ATMADGNRKIESKVEIEEERENGLVIRFYEEE---------EE 120
D S G ++ GA A+MADG+ KIESKVE EER NGL+ + E E ++
Sbjct: 61 GDRHS-GGDSRGAEALEASMADGSSKIESKVEDREERGNGLIQKDEESERSIVEDDDNDD 120
Query: 121 EEEEEEI----DEELNKKCEEFIRKVKAGIKFESQQLFIL 144
+++EEE+ EELNKKCEEFIRK+KAGIK ESQQL +L
Sbjct: 121 DDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL 159
BLAST of PI0005737 vs. ExPASy TrEMBL
Match:
A0A6J1C4P4 (ATP-dependent RNA helicase MAK5 OS=Momordica charantia OX=3673 GN=LOC111007892 PE=4 SV=1)
HSP 1 Score: 154.1 bits (388), Expect = 4.5e-34
Identity = 101/156 (64.74%), Postives = 113/156 (72.44%), Query Frame = 0
Query: 1 MKLVISASVLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNA 60
MK++ISAS+LSAMV YSSLLPFLHSLNLYIS+TIHKNY+FLLCNGLLVFIVRNSGLIG +
Sbjct: 1 MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGS 60
Query: 61 SDEQSAGNEAFGAATMADGNRKIESKVEIEEERENGLV---------IRFYEEEEEEEEE 120
+EQ G K+ESKVE EERENGLV I EE EEEEEE
Sbjct: 61 GEEQGGGG-------------KVESKVEDGEERENGLVAEQEESEKLITEDEEHEEEEEE 120
Query: 121 EEID-----EELNKKCEEFIRKVKAGIKFESQQLFI 143
EE D EELN+KCEEFIRK+KA IKFE QQ+ +
Sbjct: 121 EEEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLV 143
BLAST of PI0005737 vs. ExPASy TrEMBL
Match:
A0A6J1I0H9 (sodium/potassium/calcium exchanger 1-like OS=Cucurbita maxima OX=3661 GN=LOC111468328 PE=4 SV=1)
HSP 1 Score: 153.7 bits (387), Expect = 5.9e-34
Identity = 108/170 (63.53%), Postives = 121/170 (71.18%), Query Frame = 0
Query: 1 MKLVISASVLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNA 60
MKLVISASVLSAMVFYSSLLPFLHSLNLYIS+TIHKNYMFLLCNGLLVFIVRNSGLI ++
Sbjct: 1 MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS 60
Query: 61 SDEQSAGN-----EAFGAATMADGNRKIESKVEIEEERENGLVI---------------- 120
EQ G+ EA GAA M D IE KVE EERENG +
Sbjct: 61 GREQCGGHGSREAEALGAA-MEDSTTIIERKVEDGEERENGFIAEEEQESERLVTEEEQQ 120
Query: 121 RFYEEEEEEE--EEEEI----DEELNKKCEEFIRKVKAGIKFESQQLFIL 144
+ +EEE+EEE E EE+ +EEL+KK EEFIRK+KAGIK ESQQ+ IL
Sbjct: 121 QEHEEEQEEEKAEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL 169
BLAST of PI0005737 vs. NCBI nr
Match:
XP_011658666.2 (glutamic acid-rich protein [Cucumis sativus])
HSP 1 Score: 218.0 bits (554), Expect = 5.2e-53
Identity = 135/176 (76.70%), Postives = 140/176 (79.55%), Query Frame = 0
Query: 1 MKLVISASVLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNA 60
MKLVISAS+LSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGN
Sbjct: 1 MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT 60
Query: 61 SDEQSAGNEAFGAATMADGNRKIESKVEIEEERENGLVI-----------------RF-- 120
SDE+S+GNEA GAATMADGNRKIESKVEIEEER NGLV+ RF
Sbjct: 61 SDERSSGNEALGAATMADGNRKIESKVEIEEERGNGLVVNEDKIENLITDNEVEEERFMS 120
Query: 121 YEEEE--------------EEEEEEEIDEELNKKCEEFIRKVKAGIKFESQQLFIL 144
YEEEE EEEEEEEIDEELNKKCEEFIRK+KAGIKFESQQLFIL
Sbjct: 121 YEEEEEEEIDEEEEEEEIDEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 176
BLAST of PI0005737 vs. NCBI nr
Match:
XP_038888415.1 (histone H3.v1-like [Benincasa hispida])
HSP 1 Score: 213.0 bits (541), Expect = 1.7e-51
Identity = 128/162 (79.01%), Postives = 136/162 (83.95%), Query Frame = 0
Query: 1 MKLVISASVLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNA 60
MKLVISAS+LSAMVFYSSLLPFLHSLNLYIS+TIHKNYMFLLCNGLLVFIVRNSGLIGN+
Sbjct: 1 MKLVISASLLSAMVFYSSLLPFLHSLNLYISTTIHKNYMFLLCNGLLVFIVRNSGLIGNS 60
Query: 61 SDEQSAGNEAFGAATMADGNRKIESKVEIEEERENGLVIR-------------------F 120
SDEQS NEA GAA MADGNRKIESKVEIEEERENGL+ + F
Sbjct: 61 SDEQSGRNEALGAA-MADGNRKIESKVEIEEERENGLIAKEEENEELITKDEDEEERFNF 120
Query: 121 YEEEEEEEEEEEIDEELNKKCEEFIRKVKAGIKFESQQLFIL 144
Y EEEEEEEEEEIDEELNKKCEEFIRK+K GIKFESQQ+F+L
Sbjct: 121 Y-EEEEEEEEEEIDEELNKKCEEFIRKMKEGIKFESQQVFVL 160
BLAST of PI0005737 vs. NCBI nr
Match:
XP_008462077.2 (PREDICTED: gem-associated protein 2-like [Cucumis melo])
HSP 1 Score: 194.1 bits (492), Expect = 8.1e-46
Identity = 119/159 (74.84%), Postives = 124/159 (77.99%), Query Frame = 0
Query: 13 MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNASDEQSAGNEAFG 72
MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGN +EQS+ NEA G
Sbjct: 1 MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTCNEQSSRNEALG 60
Query: 73 AATMADGNRKIESK--VEIEEERENGLVI-----------------RFY---------EE 132
A TMADGNRKIESK VE+EEER NGLV+ RF EE
Sbjct: 61 AVTMADGNRKIESKVEVEVEEERRNGLVVNEEKFENLITDNEDEEERFISYEEEEEEEEE 120
Query: 133 EEEEEEEEEIDEELNKKCEEFIRKVKAGIKFESQQLFIL 144
EEEEEEEEEIDEELNKKCEEFIRK+KAGIKFESQQLFIL
Sbjct: 121 EEEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 159
BLAST of PI0005737 vs. NCBI nr
Match:
KAG7022808.1 (hypothetical protein SDJN02_16544, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 163.7 bits (413), Expect = 1.2e-36
Identity = 104/157 (66.24%), Postives = 124/157 (78.98%), Query Frame = 0
Query: 1 MKLVISASVLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNA 60
MKL+ISAS+LSAMVFYSSLLPFLHS NLYIS+T HKNYMFLLCNGLLVFIVRNSGLI +
Sbjct: 1 MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCS 60
Query: 61 SDEQSAGNEAFGA----ATMADGNRKIESKVEIEEERENGLVIRFYE------EEEEEEE 120
D S+G ++ GA A+MADG+ KIESKVE EER NGL+ + E E++++++
Sbjct: 61 GDRHSSG-DSRGAEALEASMADGSSKIESKVEDREERGNGLIQKDEESERSIMEDDDDDD 120
Query: 121 EEEI----DEELNKKCEEFIRKVKAGIKFESQQLFIL 144
EEE+ EELNKKCEEFIRK+KAGIK ESQQL +L
Sbjct: 121 EEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL 156
BLAST of PI0005737 vs. NCBI nr
Match:
KAG6589100.1 (hypothetical protein SDJN03_17665, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 162.5 bits (410), Expect = 2.6e-36
Identity = 103/158 (65.19%), Postives = 122/158 (77.22%), Query Frame = 0
Query: 1 MKLVISASVLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNA 60
MKL+ISAS+LSAMVFYSSLLPFLHS NLYIS+T HKNYMFLLCNGLLVFIVRNSGLI +
Sbjct: 1 MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCS 60
Query: 61 SDEQSAGNEAFGA----ATMADGNRKIESKVEIEEERENGLVIR-------FYEEEEEEE 120
D S G ++ GA A+MADG+ KIESKVE EER NGL+ + E+++ ++
Sbjct: 61 GDRHS-GGDSRGAEALEASMADGSSKIESKVEDREERGNGLIQKDEESERSIMEDDDNDD 120
Query: 121 EEEEI----DEELNKKCEEFIRKVKAGIKFESQQLFIL 144
+EEE+ EELNKKCEEFIRK+KAGIK ESQQL +L
Sbjct: 121 DEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL 157
BLAST of PI0005737 vs. TAIR 10
Match:
AT2G04495.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 48.1 bits (113), Expect = 6.7e-06
Identity = 62/189 (32.80%), Postives = 90/189 (47.62%), Query Frame = 0
Query: 2 KLVISASVLSAMVFYSSLLPF----LHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLI 61
K++ AS+ S ++ YSSL+ LH L++Y S+ + K YMFLLCNG++ FI+ G
Sbjct: 18 KIIALASIFSFILSYSSLISSLQQRLHLLSMY-SNLVDKKYMFLLCNGIVGFIL---GSF 77
Query: 62 GNASDEQSAG--------NEAFGAATMADGNRK-----IESK---VEIEEERENGLVIRF 121
S+ S G + G + + K +E K E EEE E G V+ F
Sbjct: 78 HGNSESLSQGKAINIIEQTKEVGIKDLKETKLKKVVALLEEKSVSKEEEEEEEGGRVVLF 137
Query: 122 YEEEEEE------------------------EEEEEID------EELNKKCEEFIRKVKA 141
EEEE ++EEI+ E+LNKKCE+FIRK+KA
Sbjct: 138 RGIEEEEVSLVVEVDEEILVQDLAIIRVDDHHDDEEINDSLLSVEDLNKKCEDFIRKMKA 197
BLAST of PI0005737 vs. TAIR 10
Match:
AT2G04515.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04495.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 43.5 bits (101), Expect = 1.6e-04
Identity = 48/180 (26.67%), Postives = 89/180 (49.44%), Query Frame = 0
Query: 2 KLVISASVLSAMVFYSSLLPF----LHSLNLYISSTIHKNYMFLLCNGLLVF-------- 61
K++ AS+ S ++ YSSL+ LH L +Y S+ + K YMFLLCNG++ F
Sbjct: 18 KIIAFASIFSFILSYSSLISSLQQRLHLLAMY-SNLVDKKYMFLLCNGIVGFILGSFHGN 77
Query: 62 -----------IVRNSGLIGNASDEQSAGNEAFGAATMADGNRKIESKVEIEEERENGLV 121
IV + +G +++ N+ ++ +++ E +V + E E +
Sbjct: 78 SDSLSHGKAINIVEQTKEVGIKDLKETKVNKVVALLEESNVSKEEEGRVVLSREEEEEVA 137
Query: 122 IRFYEEE------------EEEEEEEEID------EELNKKCEEFIRKVKAGIKFESQQL 141
+ E+E ++ ++++ I+ E+LNKKCE+FIRK+KA I++ + +
Sbjct: 138 LVVKEDEGILVQDLSITRLDDHDDDDAINDSLLSSEDLNKKCEDFIRKMKAEIRYGKRSI 196
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0K349 | 1.5e-53 | 82.91 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G032240 PE=4 SV=1 | [more] |
| A0A1S3CG16 | 3.9e-46 | 74.84 | gem-associated protein 2-like OS=Cucumis melo OX=3656 GN=LOC103500515 PE=4 SV=1 | [more] |
| A0A6J1EJY9 | 2.8e-36 | 65.00 | uncharacterized protein LOC111435260 OS=Cucurbita moschata OX=3662 GN=LOC1114352... | [more] |
| A0A6J1C4P4 | 4.5e-34 | 64.74 | ATP-dependent RNA helicase MAK5 OS=Momordica charantia OX=3673 GN=LOC111007892 P... | [more] |
| A0A6J1I0H9 | 5.9e-34 | 63.53 | sodium/potassium/calcium exchanger 1-like OS=Cucurbita maxima OX=3661 GN=LOC1114... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_011658666.2 | 5.2e-53 | 76.70 | glutamic acid-rich protein [Cucumis sativus] | [more] |
| XP_038888415.1 | 1.7e-51 | 79.01 | histone H3.v1-like [Benincasa hispida] | [more] |
| XP_008462077.2 | 8.1e-46 | 74.84 | PREDICTED: gem-associated protein 2-like [Cucumis melo] | [more] |
| KAG7022808.1 | 1.2e-36 | 66.24 | hypothetical protein SDJN02_16544, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAG6589100.1 | 2.6e-36 | 65.19 | hypothetical protein SDJN03_17665, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G04495.1 | 6.7e-06 | 32.80 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
| AT2G04515.1 | 1.6e-04 | 26.67 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
