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PI0005355 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCACTTCAAATAATAGCCTCCTTCTTAGTTCTTTTTGCGTTAAGAAGAAGAGTCCTCATTCGCCCAGAAAAGGAAAAAAAATCTGTTTTTCCTCACCTCTTCCAGAAAGGGTTTAGTACCTTAAACCCCAACCCTATGGCTCTCAGATCGGTGGCGGCGGCGGCTCCTCGGAATTTGAGGCAACTCATTACAGGTACCTCAACTCGTACTCTACCGATAATCTCCCAGGCTATTCATGATTGGGAGAAACCGGAGCCCAGCACCAATGCTTTCCTTTCTGGCCGCCTGTTCTCTAGCGCTTCTACTTCTAGTTTCATTCCTCCCCCGCTCCCTACCTCGGCTCAGCAGCGTGTGATGGCTGAGCCTAGTACTAACCTTTTCGTTTCCGGTAACTCGTTCTTTCTTAATCTACCTGCCTTGCGTTTACTTACTTTAACTATTATGTGTTTGCGTTTTGTATATCGCTCTCTTTCTGTTCTGAAACTGTTAACATTATTGTGATTTATGGTCTCATTCCTGCCAATTTTTTTCTATTCGGCGTTGGTGTATATATAGTGGAGTCTCGGGAATTTCATTTTTTTTGTTCTTCTTTTGGTCCTATTTTAGCGGTCTAGTAATTGAAAAATGCTTAGTTACCTTTTTTTTTTTAATAAATATTTTCTAACCTTCGATTGTCAATTTTATGGTATCCTTTTTTGTTAGTGTTAAGGCATCTTTTTTAATTTTTATGCCCGTCCCTGTTCTTTGCCTTTAATTTGCTTCACCTCTCGGTTTTGAATTGTTGAGATGCATCCGTATATCTCTAGATGGGAAAGTTTAGTCGTTGGTAGAATAGTAAGTATTGTGTGTACAATCCATGCTTGACTTGACCTAATGAGGTTGCTATCCGTGCTCTTTGGACGTTGGCCTCCTCTACGTTGATCTTTCTAATGATCGATTCTTGGTAGCTGGAATTAAAGTTTGGCTAATGTTTTTGTTGAGCTGTGTTTCTGTTTCTTTTCAAGTAGAGGAATTATTCTGGCTTTTAATACAGAAATTTCAAGTATTATTATGTTTATGAAATTAATGAACCCTGTTTGTGAAGCATGTAATTGTTGATGTTTATCTTCTTTCAGGCCTCAGTAAACGCACTACTACTGAAAAACTTCATGAAGCCTTTGCAAAGTTTGGAGAAGTTGTTAATGGTCTGTCCATTCGCTTTGCTTATGTTTGATTTTGTGCTTAGACCTGAAATTTTTCCGTCTTTGACCTATTGTTTCCTCTTCCGTTTATAGCAAGAGTTGTAACTGATCGAGTGACTGGATATTCTAAAGGATTTGGCTTTGTTAAATATGCCACTTTGGAGGATGCGGCTAAAGGCATAGAGGGCATGGATGGCAAGGTGAGTTGGGATCACTTTCCAGTTTTCTCATTTGAGACAATGAAGTTTATTTGGTGTGTATTTAGTGTTAATCCACATTTACACAAGATCCCTGGATCTTGGATTCAATGTTTTTCGCATGTTTTAGCAGAGAGGCTAAGGTCGTTGACTACCTTCCTAATAGACAACTAAGAAATGAGAAGAAAATAAATAAGAATATGACTTCATCGTGTTATTTTGGTGTATCACAGAATCAGTGTTTTAAAAAGCCCTCTCAGGCACGCACCTAGGCGCAGGTCTAGCGTCTCGCCTTGGAAAGACGAGGTTCACAAAATAAGGCACGCGCCTTTTGTGAAGCCCCGAGGCTCAAAGCATGCGCTTTGGGGCTGTTTCATTTTTTTTAAAAAATAGTAACTATGCTTTCATATTTGAGGTATTTTTATGTTTGAGGTATTTTTTTTCCATATAACTATGCTTTCATTAAGGAGAATCAAGTTTACTAAGCCGAAATTGCTAAAATTCTTATGTTTGAGGTATTTTTTTTTCATATTTTCACTTCAACTCTGCTTTTTCTTTTTAATGTAAATTTTTATATGTAGTCCGCCTCACAAAAAAAGCCTGCACCTTTTTGTGCACCTTGCGCCTAGGCTCCAGAGGGCCATTGTGCCTTAGTGCGCCTTGGGCATTTAAAAACACTGCACTGAATAAATATAAGATTCCTGAATATGGTGTGGTGTTATCCACATATGCGTACAAGATAGTAATCTAGACAAATTGATTGGCAACATAGAGAACATATCCTTACAGCACTCAGCTGTTAACTATAATACATGCTTTGCGATCTTGGATCTTATGGTACCTGGCTTGGCTGATAAATCTGCTGATCACTTGGGAATGCAATTTCTCCTTTATTGTCATGTGCAATGGTGTTTGCTTTATGTAGTCCTTTCCAGACAGTAATTATTTTTGGTAATTCATTGATTTATTCGTAGGGTTTTCTGCTATAATTTGAATCCTTCCATTTGAGCAACATGGCGGCGAGAGTATTTTTTTTATTACCTTTTTCTTGGTGGGGCATTCTCTTGCATTTAGCCGGGTTCATTTTTTCTTTTGCTGTTTGCATTGTAATGGATGTTTAAGTTTGACTGCTTAAACTGGCCTGGTCAGTGGTCACTCACGAATATAAGAAAATGAACACTTTACTTTACAATGTTGAAGAAAAACATTAACTATTAGACTTTAACAGTTATTTGAATCTTCTAAAGGGTATCACTTTCTTGGAAACATTAGAGTTACTATTATCATCAAGTTTTAAAATGATTGCCAATATGTGGCTAAATGGTTTTGGTTGGTTGGTGAATCTTTTATAGAAAGAACAATCTTGACAATGCAAAATGGTTGTATTGATCTATTAATTGATCTAGGTTTCGTTTAAATCCATTTTGTCAAACTATGCCTAGAACTTCCCTTGGTTTGCTTCCTTGTCATTTTTGACATTTTAGTAGAATACTCCCGTTATTGGCTGTTCAAATTGATTTGATTCCATGTGTTTTACCTCCCTGCTCTCCAATTAAAACATCTACTCTGATAAACTATACAAATTAGAATGCCCGTAAATAAGATTTAAGAAACTGGGTTGATGCTTGCTTTTGAACACATGTTGAAATTTGTTTATTTATAGTTGAATGTTGATGAATCTCTTTTTGTTTTCCCTCTTAATGTTATCCAGTTCCTGGATGGTTGGGTTATATTTGCTGAGTATGCAAGGCCAAGACCACCTCCTGAGAACAACAATGGTTTTGCCCCATATGGCCGTCAGTGACTTGTTAATTTTTGCGATGAAGGATGCATCCATATCCATTGAACTCTCTTGATCTGCAAAATGGCACTCAACTTTATTTATATGATTTAGGTTCTTTCTTCAATGGAGGTTCGTTGTTCTCTTCCATTGCAGATAACTTTTTTGTTCTGCGGAACTCTAGATTAGCCGCAGGTATTGAGTTGAGTATATTTGAATTGAGAAATTAGCATTTTATTGGTACTATATGTATGATCTATTTTTCAACACATTTAGTCAACTATTTTATCTATATATATGTTTCACCAATAAACGTACTTTACACTGCATTTTTGCTACTGATAAGCTTATAGTTTGGTCTTGTCGTGTATGTTTTTGGATTAATTTCTAGTTAACGACACAATTGACCTATGAATAGGTAAATGTGGATTCAAATATTGGAATACTTTATTTTTGGTTAAAATACCAAATCTTTGTATTCGTATCTTTTTTTTTCTATTTTTTTGGTCTATGTACTTAACAATCACTTAAGTCTCAATAAATCTTAAA GTCACTTCAAATAATAGCCTCCTTCTTAGTTCTTTTTGCGTTAAGAAGAAGAGTCCTCATTCGCCCAGAAAAGGAAAAAAAATCTGTTTTTCCTCACCTCTTCCAGAAAGGGTTTAGTACCTTAAACCCCAACCCTATGGCTCTCAGATCGGTGGCGGCGGCGGCTCCTCGGAATTTGAGGCAACTCATTACAGGTACCTCAACTCGTACTCTACCGATAATCTCCCAGGCTATTCATGATTGGGAGAAACCGGAGCCCAGCACCAATGCTTTCCTTTCTGGCCGCCTGTTCTCTAGCGCTTCTACTTCTAGTTTCATTCCTCCCCCGCTCCCTACCTCGGCTCAGCAGCGTGTGATGGCTGAGCCTAGTACTAACCTTTTCGTTTCCGGCCTCAGTAAACGCACTACTACTGAAAAACTTCATGAAGCCTTTGCAAAGTTTGGAGAAGTTGTTAATGCAAGAGTTGTAACTGATCGAGTGACTGGATATTCTAAAGGATTTGGCTTTGTTAAATATGCCACTTTGGAGGATGCGGCTAAAGGCATAGAGGGCATGGATGGCAAGTTCCTGGATGGTTGGGTTATATTTGCTGAGTATGCAAGGCCAAGACCACCTCCTGAGAACAACAATGGTTTTGCCCCATATGGCCGTCAGTGACTTGTTAATTTTTGCGATGAAGGATGCATCCATATCCATTGAACTCTCTTGATCTGCAAAATGGCACTCAACTTTATTTATATGATTTAGGTTCTTTCTTCAATGGAGGTTCGTTGTTCTCTTCCATTGCAGATAACTTTTTTGTTCTGCGGAACTCTAGATTAGCCGCAGGTATTGAGTTGAGTATATTTGAATTGAGAAATTAGCATTTTATTGGTACTATATGTATGATCTATTTTTCAACACATTTAGTCAACTATTTTATCTATATATATGTTTCACCAATAAACGTACTTTACACTGCATTTTTGCTACTGATAAGCTTATAGTTTGGTCTTGTCGTGTATGTTTTTGGATTAATTTCTAGTTAACGACACAATTGACCTATGAATAGGTAAATGTGGATTCAAATATTGGAATACTTTATTTTTGGTTAAAATACCAAATCTTTGTATTCGTATCTTTTTTTTTCTATTTTTTTGGTCTATGTACTTAACAATCACTTAAGTCTCAATAAATCTTAAA ATGGCTCTCAGATCGGTGGCGGCGGCGGCTCCTCGGAATTTGAGGCAACTCATTACAGGTACCTCAACTCGTACTCTACCGATAATCTCCCAGGCTATTCATGATTGGGAGAAACCGGAGCCCAGCACCAATGCTTTCCTTTCTGGCCGCCTGTTCTCTAGCGCTTCTACTTCTAGTTTCATTCCTCCCCCGCTCCCTACCTCGGCTCAGCAGCGTGTGATGGCTGAGCCTAGTACTAACCTTTTCGTTTCCGGCCTCAGTAAACGCACTACTACTGAAAAACTTCATGAAGCCTTTGCAAAGTTTGGAGAAGTTGTTAATGCAAGAGTTGTAACTGATCGAGTGACTGGATATTCTAAAGGATTTGGCTTTGTTAAATATGCCACTTTGGAGGATGCGGCTAAAGGCATAGAGGGCATGGATGGCAAGTTCCTGGATGGTTGGGTTATATTTGCTGAGTATGCAAGGCCAAGACCACCTCCTGAGAACAACAATGGTTTTGCCCCATATGGCCGTCAGTGA MALRSVAAAAPRNLRQLITGTSTRTLPIISQAIHDWEKPEPSTNAFLSGRLFSSASTSSFIPPPLPTSAQQRVMAEPSTNLFVSGLSKRTTTEKLHEAFAKFGEVVNARVVTDRVTGYSKGFGFVKYATLEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPENNNGFAPYGRQ Homology
BLAST of PI0005355 vs. ExPASy Swiss-Prot
Match: Q9FIU6 (Organelle RRM domain-containing protein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ORRM2 PE=1 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 4.9e-40 Identity = 93/151 (61.59%), Postives = 108/151 (71.52%), Query Frame = 0
BLAST of PI0005355 vs. ExPASy Swiss-Prot
Match: Q9FX45 (Organelle RRM domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ORRM6 PE=1 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 9.0e-18 Identity = 52/113 (46.02%), Postives = 68/113 (60.18%), Query Frame = 0
BLAST of PI0005355 vs. ExPASy Swiss-Prot
Match: Q9FNR1 (Glycine-rich RNA-binding protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBG3 PE=1 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 7.9e-14 Identity = 37/88 (42.05%), Postives = 54/88 (61.36%), Query Frame = 0
BLAST of PI0005355 vs. ExPASy Swiss-Prot
Match: Q9C909 (Glycine-rich RNA-binding protein 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBG5 PE=1 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.0e-13 Identity = 52/129 (40.31%), Postives = 73/129 (56.59%), Query Frame = 0
BLAST of PI0005355 vs. ExPASy Swiss-Prot
Match: Q9FFZ6 (Small RNA-binding protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=S-RBP11 PE=2 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.3e-13 Identity = 38/90 (42.22%), Postives = 59/90 (65.56%), Query Frame = 0
BLAST of PI0005355 vs. ExPASy TrEMBL
Match: A0A1S3C066 (glycine-rich RNA-binding protein 4, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494967 PE=4 SV=1) HSP 1 Score: 323.9 bits (829), Expect = 4.0e-85 Identity = 160/173 (92.49%), Postives = 167/173 (96.53%), Query Frame = 0
BLAST of PI0005355 vs. ExPASy TrEMBL
Match: A0A5D3DR24 (Glycine-rich RNA-binding protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold668G00050 PE=4 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 1.5e-84 Identity = 159/172 (92.44%), Postives = 166/172 (96.51%), Query Frame = 0
BLAST of PI0005355 vs. ExPASy TrEMBL
Match: A0A0A0LD10 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G403980 PE=4 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 4.4e-84 Identity = 160/173 (92.49%), Postives = 166/173 (95.95%), Query Frame = 0
BLAST of PI0005355 vs. ExPASy TrEMBL
Match: A0A6J1INZ4 (organelle RRM domain-containing protein 2, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111476943 PE=4 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 2.6e-76 Identity = 150/173 (86.71%), Postives = 157/173 (90.75%), Query Frame = 0
BLAST of PI0005355 vs. ExPASy TrEMBL
Match: A0A6J1FB41 (organelle RRM domain-containing protein 2, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111443707 PE=4 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 6.4e-75 Identity = 151/173 (87.28%), Postives = 158/173 (91.33%), Query Frame = 0
BLAST of PI0005355 vs. NCBI nr
Match: XP_008454580.1 (PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial [Cucumis melo]) HSP 1 Score: 323.9 bits (829), Expect = 8.2e-85 Identity = 160/173 (92.49%), Postives = 167/173 (96.53%), Query Frame = 0
BLAST of PI0005355 vs. NCBI nr
Match: KAA0063485.1 (glycine-rich RNA-binding protein 4 [Cucumis melo var. makuwa] >TYK25992.1 glycine-rich RNA-binding protein 4 [Cucumis melo var. makuwa]) HSP 1 Score: 322.0 bits (824), Expect = 3.1e-84 Identity = 159/172 (92.44%), Postives = 166/172 (96.51%), Query Frame = 0
BLAST of PI0005355 vs. NCBI nr
Match: XP_004151968.1 (organelle RRM domain-containing protein 2, mitochondrial [Cucumis sativus] >KGN57946.1 hypothetical protein Csa_009766 [Cucumis sativus]) HSP 1 Score: 320.5 bits (820), Expect = 9.1e-84 Identity = 160/173 (92.49%), Postives = 166/173 (95.95%), Query Frame = 0
BLAST of PI0005355 vs. NCBI nr
Match: XP_038896843.1 (organelle RRM domain-containing protein 2, mitochondrial [Benincasa hispida]) HSP 1 Score: 312.4 bits (799), Expect = 2.5e-81 Identity = 159/173 (91.91%), Postives = 163/173 (94.22%), Query Frame = 0
BLAST of PI0005355 vs. NCBI nr
Match: XP_022976594.1 (organelle RRM domain-containing protein 2, mitochondrial-like [Cucurbita maxima]) HSP 1 Score: 294.7 bits (753), Expect = 5.3e-76 Identity = 150/173 (86.71%), Postives = 157/173 (90.75%), Query Frame = 0
BLAST of PI0005355 vs. TAIR 10
Match: AT5G54580.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 165.6 bits (418), Expect = 3.5e-41 Identity = 93/151 (61.59%), Postives = 108/151 (71.52%), Query Frame = 0
BLAST of PI0005355 vs. TAIR 10
Match: AT2G37510.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 114.8 bits (286), Expect = 7.0e-26 Identity = 63/116 (54.31%), Postives = 78/116 (67.24%), Query Frame = 0
BLAST of PI0005355 vs. TAIR 10
Match: AT1G73530.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 91.7 bits (226), Expect = 6.4e-19 Identity = 52/113 (46.02%), Postives = 68/113 (60.18%), Query Frame = 0
BLAST of PI0005355 vs. TAIR 10
Match: AT5G61030.1 (glycine-rich RNA-binding protein 3 ) HSP 1 Score: 78.6 bits (192), Expect = 5.6e-15 Identity = 37/88 (42.05%), Postives = 54/88 (61.36%), Query Frame = 0
BLAST of PI0005355 vs. TAIR 10
Match: AT1G74230.1 (glycine-rich RNA-binding protein 5 ) HSP 1 Score: 78.2 bits (191), Expect = 7.3e-15 Identity = 52/129 (40.31%), Postives = 73/129 (56.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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