Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATCAGAGCGAGGTATCGATGAAACCTTAGAAGATCAAACACTTGTTGGAAACCCAATAGAGGACACAGTTGTAATTAGTGTCGTCGTCGCTGTCGTCGTCGATGGTCGTATTGGGTCTGTCATGGACAAATGGTTCTGCCATCTTCAAACAACACCGGTATTCCAAAATCTTGCAGTTTTTCAGTCGTACGTGCCTTCGCGCGTGGCCCACACGCCGTCGCTGGAGGTCCACGAGCCTGTCCATCCTGATCAGAAGCTGTCGACCAACCTTTTCTTGCCACCCTTTCCTTCATCCGCAGTTGCCAGTGCCTCCCACACACCGCTTCTTGTTCTGCTCTCTTCCTTCGTCCAGCCACCGTCGTTTCAGTCATCTAATCTGTATGCCCTTCCTTCCACTACCCCTGTTCCAAATCCTAGCAATCATCTAGGGGTTGAGCATCCTCAAATCCACTCAACATTTGAAGTCGGGGAGTCTTCTGCACATTCCAACCCTAACATGCCAACCTTTTCTTCGAGAGTAGCTCACCAGCAATTGAAGGAGCTTCGACAACAGATCGCAGCAATTGAGGCTTCTTAG
mRNA sequence
ATGGTATCAGAGCGAGGTATCGATGAAACCTTAGAAGATCAAACACTTGTTGGAAACCCAATAGAGGACACAGTTGTAATTAGTGTCGTCGTCGCTGTCGTCGTCGATGGTCGTATTGGGTCTGTCATGGACAAATGGTTCTGCCATCTTCAAACAACACCGGTATTCCAAAATCTTGCAGTTTTTCAGTCGTACGTGCCTTCGCGCGTGGCCCACACGCCGTCGCTGGAGGTCCACGAGCCTGTCCATCCTGATCAGAAGCTGTCGACCAACCTTTTCTTGCCACCCTTTCCTTCATCCGCAGTTGCCAGTGCCTCCCACACACCGCTTCTTGTTCTGCTCTCTTCCTTCGTCCAGCCACCGTCGTTTCAGTCATCTAATCTGTATGCCCTTCCTTCCACTACCCCTGTTCCAAATCCTAGCAATCATCTAGGGGTTGAGCATCCTCAAATCCACTCAACATTTGAAGTCGGGGAGTCTTCTGCACATTCCAACCCTAACATGCCAACCTTTTCTTCGAGAGTAGCTCACCAGCAATTGAAGGAGCTTCGACAACAGATCGCAGCAATTGAGGCTTCTTAG
Coding sequence (CDS)
ATGGTATCAGAGCGAGGTATCGATGAAACCTTAGAAGATCAAACACTTGTTGGAAACCCAATAGAGGACACAGTTGTAATTAGTGTCGTCGTCGCTGTCGTCGTCGATGGTCGTATTGGGTCTGTCATGGACAAATGGTTCTGCCATCTTCAAACAACACCGGTATTCCAAAATCTTGCAGTTTTTCAGTCGTACGTGCCTTCGCGCGTGGCCCACACGCCGTCGCTGGAGGTCCACGAGCCTGTCCATCCTGATCAGAAGCTGTCGACCAACCTTTTCTTGCCACCCTTTCCTTCATCCGCAGTTGCCAGTGCCTCCCACACACCGCTTCTTGTTCTGCTCTCTTCCTTCGTCCAGCCACCGTCGTTTCAGTCATCTAATCTGTATGCCCTTCCTTCCACTACCCCTGTTCCAAATCCTAGCAATCATCTAGGGGTTGAGCATCCTCAAATCCACTCAACATTTGAAGTCGGGGAGTCTTCTGCACATTCCAACCCTAACATGCCAACCTTTTCTTCGAGAGTAGCTCACCAGCAATTGAAGGAGCTTCGACAACAGATCGCAGCAATTGAGGCTTCTTAG
Protein sequence
MVSERGIDETLEDQTLVGNPIEDTVVISVVVAVVVDGRIGSVMDKWFCHLQTTPVFQNLAVFQSYVPSRVAHTPSLEVHEPVHPDQKLSTNLFLPPFPSSAVASASHTPLLVLLSSFVQPPSFQSSNLYALPSTTPVPNPSNHLGVEHPQIHSTFEVGESSAHSNPNMPTFSSRVAHQQLKELRQQIAAIEAS
Homology
BLAST of PI0005231 vs. ExPASy TrEMBL
Match:
A0A1S4E325 (uncharacterized protein LOC107991791 OS=Cucumis melo OX=3656 GN=LOC107991791 PE=4 SV=1)
HSP 1 Score: 144.4 bits (363), Expect = 4.8e-31
Identity = 83/176 (47.16%), Postives = 102/176 (57.95%), Query Frame = 0
Query: 1 MVSERGIDETLEDQTLVGNPIEDT---VVISVVVAVVVDGRIGSVMDKWFCHLQTTPVFQ 60
MVSE D+ L++ T GN IE+T + ++ +VD RI MD+WFCHLQTT
Sbjct: 1 MVSEHDADQILDNTTFDGNQIEETGNDISETIATVDIVDARISVAMDEWFCHLQTTSANM 60
Query: 61 NLAVFQSYVPSRVAHTPSLEVHEPVHPDQKLSTNLFLPPFPSSAVASASHTPLLVLLSSF 120
+ F S+ VAH PS EP HP Q + N LPP SS + H PL VL +
Sbjct: 61 IRSPFLSFASPHVAHEPSSRTSEPAHPIQIMPANPSLPPLSSSTTYNVLHVPLHVLPPNS 120
Query: 121 VQPPS-FQSSNLYALPSTTPVPNPSNHLGVEHPQIHSTFEVGESSAHSNPNMPTFS 173
+QPPS SNLY +P T NPS H + +PQIHSTFEVGESSAHSNPN+ S
Sbjct: 121 IQPPSLLLQSNLYGMPPTESAANPSYHPRIGNPQIHSTFEVGESSAHSNPNVQASS 176
BLAST of PI0005231 vs. ExPASy TrEMBL
Match:
A0A5D3BES5 (Kirola-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold469G00220 PE=4 SV=1)
HSP 1 Score: 113.6 bits (283), Expect = 9.1e-22
Identity = 79/184 (42.93%), Postives = 96/184 (52.17%), Query Frame = 0
Query: 1 MVSERGIDETLEDQTLVGNPIEDTVVISVVVAVVVDGRIGSVMDKWFCHLQTTPVFQNLA 60
MV E+G++ETLE QTLVGN E+T I+VV+AVV+D IG+ MD+
Sbjct: 1 MVLEQGVNETLEGQTLVGNQTEETSAINVVIAVVIDAYIGAAMDE--------------- 60
Query: 61 VFQSYVPSRVAHTPSLEVHEPVHPDQKLSTNLFLPPFPSSAVASASHTPLLVLLSSFVQP 120
S H PL VL S+ V+P
Sbjct: 61 -------------------------------------------SHLHVPLYVLPSTSVEP 120
Query: 121 PSFQSSNLYALPSTTPVPNPSNHLGVEHPQIHSTFEVGESSAHSNPNMPT-FSSRVAHQQ 180
SNLY+LPST VPNPSNHL VEHPQI+ TFEV ESSAHSN ++PT SS +AHQQ
Sbjct: 121 LPLLPSNLYSLPSTDSVPNPSNHLEVEHPQIYLTFEVEESSAHSNLSVPTSSSSSIAHQQ 126
Query: 181 LKEL 184
L+ L
Sbjct: 181 LEGL 126
BLAST of PI0005231 vs. ExPASy TrEMBL
Match:
A0A5A7UBX6 (Kirola-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00280 PE=4 SV=1)
HSP 1 Score: 112.5 bits (280), Expect = 2.0e-21
Identity = 78/184 (42.39%), Postives = 95/184 (51.63%), Query Frame = 0
Query: 1 MVSERGIDETLEDQTLVGNPIEDTVVISVVVAVVVDGRIGSVMDKWFCHLQTTPVFQNLA 60
MV E+G++ETLE QTLVGN E+T I+VV+AVV+D IG+ MD+
Sbjct: 1 MVLEQGVNETLEGQTLVGNQTEETSAINVVIAVVIDAYIGAAMDE--------------- 60
Query: 61 VFQSYVPSRVAHTPSLEVHEPVHPDQKLSTNLFLPPFPSSAVASASHTPLLVLLSSFVQP 120
S H PL VL S+ V+P
Sbjct: 61 -------------------------------------------SLLHVPLYVLPSTSVEP 120
Query: 121 PSFQSSNLYALPSTTPVPNPSNHLGVEHPQIHSTFEVGESSAHSNPNMPT-FSSRVAHQQ 180
SNLY+LPST VPNPSNHL VEHPQI+STFEV ESS H N ++PT SS +AHQQ
Sbjct: 121 LPLLPSNLYSLPSTDSVPNPSNHLEVEHPQIYSTFEVEESSTHFNLSVPTSSSSSIAHQQ 126
Query: 181 LKEL 184
L+ L
Sbjct: 181 LEGL 126
BLAST of PI0005231 vs. ExPASy TrEMBL
Match:
A0A5D3C1P7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold432G00040 PE=4 SV=1)
HSP 1 Score: 111.7 bits (278), Expect = 3.5e-21
Identity = 87/200 (43.50%), Postives = 103/200 (51.50%), Query Frame = 0
Query: 1 MVSERGIDETLEDQTLVGNPIEDTVV-ISVVVAVVVDGRIGSVMDKWFCHLQTTPVFQNL 60
MVSE ID+TLE+ TL GN E+ V IS+VVA V+ +I M++WFC LQTTP
Sbjct: 1 MVSEHDIDQTLENTTLDGNQTEEIAVRISIVVAAAVNAQISIAMNEWFCCLQTTP----- 60
Query: 61 AVFQSYVPSRVAHTPSLEVHEPVHPDQKLSTNLFLPPFPSSAVASASHTPLLVLLSS--- 120
N+ L PFPSSA A+ L LSS
Sbjct: 61 ------------------------------ANMILSPFPSSAPPRAAVGNLRTSLSSSNH 120
Query: 121 FVQPPSFQSSNLYALPSTTPVPNPSNHLGVEHPQIHSTFEVGESSAHSNPNM---PTFSS 180
Q S SNLYALP N S H V +PQIH T EVGES A SNPN+ + SS
Sbjct: 121 AGQSFSTTLSNLYALPPIGSAANTSYHSKVRNPQIHLTIEVGESLARSNPNVQASSSSSS 165
Query: 181 RVAHQQLKELRQQIAAIEAS 194
+AH QL+ LRQQIA IEA+
Sbjct: 181 SIAHHQLEGLRQQIATIEAT 165
BLAST of PI0005231 vs. ExPASy TrEMBL
Match:
A0A5D3CWE7 (Kirola-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00860 PE=4 SV=1)
HSP 1 Score: 103.2 bits (256), Expect = 1.2e-18
Identity = 71/157 (45.22%), Postives = 85/157 (54.14%), Query Frame = 0
Query: 29 VVVAVVVDGRIGSVMDKWFCHLQTTPVFQNLAVFQSYVPSRVAHTPSLEVHEPVHPDQKL 88
V A VD RI + MD+WF +LQTT + P +H E+H VHP Q +
Sbjct: 82 VAAAATVDARISATMDEWFHNLQTTLANAFPSNLSPSTPPNTSHALPPELHASVHPPQTM 141
Query: 89 STNLFLPPFPSSAVASASHTPLLVLLSSFVQPPSFQSSNLYALPSTTPVPNPSNHLGVEH 148
T + P SSA A H + VL +F QP SNLYALPST N S H ++
Sbjct: 142 PTIPSVQPSFSSAAYIALHALIHVLPPNFGQPSPLMPSNLYALPST----NLSYHPNDKN 201
Query: 149 PQIHSTFEVGESSAHSNPNMPTFSSRVAHQQLKELRQ 186
PQIHSTFE GESS HSN N+ SSR+A QQ K RQ
Sbjct: 202 PQIHSTFEFGESSLHSNLNVQA-SSRIAQQQPKGFRQ 233
BLAST of PI0005231 vs. NCBI nr
Match:
XP_016902631.1 (PREDICTED: uncharacterized protein LOC107991791 [Cucumis melo])
HSP 1 Score: 144.4 bits (363), Expect = 9.9e-31
Identity = 83/176 (47.16%), Postives = 102/176 (57.95%), Query Frame = 0
Query: 1 MVSERGIDETLEDQTLVGNPIEDT---VVISVVVAVVVDGRIGSVMDKWFCHLQTTPVFQ 60
MVSE D+ L++ T GN IE+T + ++ +VD RI MD+WFCHLQTT
Sbjct: 1 MVSEHDADQILDNTTFDGNQIEETGNDISETIATVDIVDARISVAMDEWFCHLQTTSANM 60
Query: 61 NLAVFQSYVPSRVAHTPSLEVHEPVHPDQKLSTNLFLPPFPSSAVASASHTPLLVLLSSF 120
+ F S+ VAH PS EP HP Q + N LPP SS + H PL VL +
Sbjct: 61 IRSPFLSFASPHVAHEPSSRTSEPAHPIQIMPANPSLPPLSSSTTYNVLHVPLHVLPPNS 120
Query: 121 VQPPS-FQSSNLYALPSTTPVPNPSNHLGVEHPQIHSTFEVGESSAHSNPNMPTFS 173
+QPPS SNLY +P T NPS H + +PQIHSTFEVGESSAHSNPN+ S
Sbjct: 121 IQPPSLLLQSNLYGMPPTESAANPSYHPRIGNPQIHSTFEVGESSAHSNPNVQASS 176
BLAST of PI0005231 vs. NCBI nr
Match:
TYJ97637.1 (kirola-like [Cucumis melo var. makuwa])
HSP 1 Score: 113.6 bits (283), Expect = 1.9e-21
Identity = 79/184 (42.93%), Postives = 96/184 (52.17%), Query Frame = 0
Query: 1 MVSERGIDETLEDQTLVGNPIEDTVVISVVVAVVVDGRIGSVMDKWFCHLQTTPVFQNLA 60
MV E+G++ETLE QTLVGN E+T I+VV+AVV+D IG+ MD+
Sbjct: 1 MVLEQGVNETLEGQTLVGNQTEETSAINVVIAVVIDAYIGAAMDE--------------- 60
Query: 61 VFQSYVPSRVAHTPSLEVHEPVHPDQKLSTNLFLPPFPSSAVASASHTPLLVLLSSFVQP 120
S H PL VL S+ V+P
Sbjct: 61 -------------------------------------------SHLHVPLYVLPSTSVEP 120
Query: 121 PSFQSSNLYALPSTTPVPNPSNHLGVEHPQIHSTFEVGESSAHSNPNMPT-FSSRVAHQQ 180
SNLY+LPST VPNPSNHL VEHPQI+ TFEV ESSAHSN ++PT SS +AHQQ
Sbjct: 121 LPLLPSNLYSLPSTDSVPNPSNHLEVEHPQIYLTFEVEESSAHSNLSVPTSSSSSIAHQQ 126
Query: 181 LKEL 184
L+ L
Sbjct: 181 LEGL 126
BLAST of PI0005231 vs. NCBI nr
Match:
KAA0053242.1 (kirola-like [Cucumis melo var. makuwa])
HSP 1 Score: 112.5 bits (280), Expect = 4.2e-21
Identity = 78/184 (42.39%), Postives = 95/184 (51.63%), Query Frame = 0
Query: 1 MVSERGIDETLEDQTLVGNPIEDTVVISVVVAVVVDGRIGSVMDKWFCHLQTTPVFQNLA 60
MV E+G++ETLE QTLVGN E+T I+VV+AVV+D IG+ MD+
Sbjct: 1 MVLEQGVNETLEGQTLVGNQTEETSAINVVIAVVIDAYIGAAMDE--------------- 60
Query: 61 VFQSYVPSRVAHTPSLEVHEPVHPDQKLSTNLFLPPFPSSAVASASHTPLLVLLSSFVQP 120
S H PL VL S+ V+P
Sbjct: 61 -------------------------------------------SLLHVPLYVLPSTSVEP 120
Query: 121 PSFQSSNLYALPSTTPVPNPSNHLGVEHPQIHSTFEVGESSAHSNPNMPT-FSSRVAHQQ 180
SNLY+LPST VPNPSNHL VEHPQI+STFEV ESS H N ++PT SS +AHQQ
Sbjct: 121 LPLLPSNLYSLPSTDSVPNPSNHLEVEHPQIYSTFEVEESSTHFNLSVPTSSSSSIAHQQ 126
Query: 181 LKEL 184
L+ L
Sbjct: 181 LEGL 126
BLAST of PI0005231 vs. NCBI nr
Match:
TYK05873.1 (uncharacterized protein E5676_scaffold432G00040 [Cucumis melo var. makuwa])
HSP 1 Score: 111.7 bits (278), Expect = 7.1e-21
Identity = 87/200 (43.50%), Postives = 103/200 (51.50%), Query Frame = 0
Query: 1 MVSERGIDETLEDQTLVGNPIEDTVV-ISVVVAVVVDGRIGSVMDKWFCHLQTTPVFQNL 60
MVSE ID+TLE+ TL GN E+ V IS+VVA V+ +I M++WFC LQTTP
Sbjct: 1 MVSEHDIDQTLENTTLDGNQTEEIAVRISIVVAAAVNAQISIAMNEWFCCLQTTP----- 60
Query: 61 AVFQSYVPSRVAHTPSLEVHEPVHPDQKLSTNLFLPPFPSSAVASASHTPLLVLLSS--- 120
N+ L PFPSSA A+ L LSS
Sbjct: 61 ------------------------------ANMILSPFPSSAPPRAAVGNLRTSLSSSNH 120
Query: 121 FVQPPSFQSSNLYALPSTTPVPNPSNHLGVEHPQIHSTFEVGESSAHSNPNM---PTFSS 180
Q S SNLYALP N S H V +PQIH T EVGES A SNPN+ + SS
Sbjct: 121 AGQSFSTTLSNLYALPPIGSAANTSYHSKVRNPQIHLTIEVGESLARSNPNVQASSSSSS 165
Query: 181 RVAHQQLKELRQQIAAIEAS 194
+AH QL+ LRQQIA IEA+
Sbjct: 181 SIAHHQLEGLRQQIATIEAT 165
BLAST of PI0005231 vs. NCBI nr
Match:
KAA0054450.1 (kirola-like [Cucumis melo var. makuwa] >TYK14589.1 kirola-like [Cucumis melo var. makuwa])
HSP 1 Score: 103.2 bits (256), Expect = 2.5e-18
Identity = 71/157 (45.22%), Postives = 85/157 (54.14%), Query Frame = 0
Query: 29 VVVAVVVDGRIGSVMDKWFCHLQTTPVFQNLAVFQSYVPSRVAHTPSLEVHEPVHPDQKL 88
V A VD RI + MD+WF +LQTT + P +H E+H VHP Q +
Sbjct: 82 VAAAATVDARISATMDEWFHNLQTTLANAFPSNLSPSTPPNTSHALPPELHASVHPPQTM 141
Query: 89 STNLFLPPFPSSAVASASHTPLLVLLSSFVQPPSFQSSNLYALPSTTPVPNPSNHLGVEH 148
T + P SSA A H + VL +F QP SNLYALPST N S H ++
Sbjct: 142 PTIPSVQPSFSSAAYIALHALIHVLPPNFGQPSPLMPSNLYALPST----NLSYHPNDKN 201
Query: 149 PQIHSTFEVGESSAHSNPNMPTFSSRVAHQQLKELRQ 186
PQIHSTFE GESS HSN N+ SSR+A QQ K RQ
Sbjct: 202 PQIHSTFEFGESSLHSNLNVQA-SSRIAQQQPKGFRQ 233
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A1S4E325 | 4.8e-31 | 47.16 | uncharacterized protein LOC107991791 OS=Cucumis melo OX=3656 GN=LOC107991791 PE=... | [more] |
| A0A5D3BES5 | 9.1e-22 | 42.93 | Kirola-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold469G00220 PE... | [more] |
| A0A5A7UBX6 | 2.0e-21 | 42.39 | Kirola-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00280 PE... | [more] |
| A0A5D3C1P7 | 3.5e-21 | 43.50 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3CWE7 | 1.2e-18 | 45.22 | Kirola-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00860 PE... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_016902631.1 | 9.9e-31 | 47.16 | PREDICTED: uncharacterized protein LOC107991791 [Cucumis melo] | [more] |
| TYJ97637.1 | 1.9e-21 | 42.93 | kirola-like [Cucumis melo var. makuwa] | [more] |
| KAA0053242.1 | 4.2e-21 | 42.39 | kirola-like [Cucumis melo var. makuwa] | [more] |
| TYK05873.1 | 7.1e-21 | 43.50 | uncharacterized protein E5676_scaffold432G00040 [Cucumis melo var. makuwa] | [more] |
| KAA0054450.1 | 2.5e-18 | 45.22 | kirola-like [Cucumis melo var. makuwa] >TYK14589.1 kirola-like [Cucumis melo var... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
