PI0005109 (gene) Melon (PI 482460) v1

Overview
NamePI0005109
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
Descriptiondouble-stranded RNA-binding protein 1 isoform X1
Locationchr04: 9931087 .. 9943705 (+)
RNA-Seq ExpressionPI0005109
SyntenyPI0005109
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGTCATTTTATTACACAACCAATGTTGGATTTGGGGGAACCAAGCTGAAGCAGGAAGTGAAGTCCTTCCTCTCCACAGTCACCATCTTCTTCTCAACTTCTAGGGTTCTTCAATTTCTCTATCTATTTCACTCCATTTTCTCTATTGAAGTCCCTTCATTTCATTCAACATGTTCAAAACAAAGCTTCAAGAACTCTGTCATCGCAAATCTTACAAATTACCTGAATATTCCGTGGTTAAACAAGGCCAAGACCACGACCCACGTTTTGAAGCCACTGTCACCGTCGACGGCAGGCAATTTTGCTCACCCGCTCCTTCTAAATCTTCAAAGCAAGCACAGAACGATGCTGCTAAGCTTGCTTTTGACTTCTTTTCTCTTCCTTCTTTACCTCAACCGCCGGAGCAGCTTTGCCCTCAACCAGTTTTGCCAGAATCGTCTTCTCCCCTGAAACTAATTCCTTCTATTCCCCCATTTTCTCCGTCCTATCTAAATTTATCTTCTTTTCCTCAGCCGTCTTTGCCTTCACAATCGGGTACGTGTTAACACTCTTTTTTCTTGCCACTTTCCATTTTCTTCTATCACGAGTGTATTTGTTAATAGTATTTCCATTTCACCTCTATGGCAAGAAATTGCAAGGTTTGGGGGGCGAGGGTGGTCTAGGTATTGGTTATTTTTAGAATAGAAATATTTTCCATGTTAGGTAATGTTTGAGGTTCCCTATCAGAATGTTGCTTTGTATGATTGTGTTGTTAGTAAGTTTAGCATTACGAGAGAAGAAGATATACTATGCTTACAAAATGGAGGAACCAATTTACAAATTATCTCATTAAAGAGCTAGGCTAGGTAAGTAATTCGAGTGATGTGAGACTCTATATCTTGCTCTTTGCCACCGAAGGTACGATAACGTCTCTCCAGCCTAATATACCGAAAGACAGCCTTGATGAAATTTGCTATAGGGTCTTTTTCTCCAGGGATGCTTGAGTGAGTGATAGAAAGAAGAGTCCATATATTATCATTCTTATTATTTTTCTGATAAGAAACAGAGAACCTCATATATTATTTGGATTTTCAATATTCCATGATCCAAAATCCAACCATATGAAACCCCAAAAAGATTTTGCCAAGGAACACGAGCTGGAAGCTGTGAGCTTCAGAATCCCTTTTGCATGAAATACAACAATTGGGAGACATATTAAGCCTAGGGGATCTTTGTTGTATTGTATCTTGTTTTGGGGTGTTTAAAGAATGGCTCCCATATAAAAACTACACTTTTTTGGGTGGATATTTTTCTTCCTGGATGGTATGATATATTTCATCTTTGGCTTGGATTCCAAGTCTTGCTAGGGATTTGAACCAGGATTTGGATGTGAAAACACCATCCTTGTAGAAATTCTAGACCCACGTGTCTCCTTATTTATCAAGCATAATAAGTGAAAGGGCATTTGAGTGCCTAGTCCATTCTTTAATTTCAACATCAGCAAGACTTCTTTTTGGCCAAATGTTCCATGATCAAGATGGTCGCCCTTCTGTTAGTAGGGGTGTTTTGGCGGGCTGGTTTTTTTGTATGCCCTTGTATTCTTTCCTTCTTTCTCAATGAAAGTTGTTTGGTTCATAAAAAAAAAGGTTCCATGATCAAGAAGCAATATTGCATAAAGTCTGAAATGGATGCCTCATTCTTGAGGGTAAGAGGATATAAGGAGGGGAACTATCTAGCTCATCGATGACCTAGATGACATAAATGGGCTTCATTTTGTCAATTTAGACCCAATCTACCTCTTAGCACTCTATTCATGCAAAATGATATATAAATCTATAAATTTTTCACGAACTAGCTCAATTTTAACCAAAAATATCACACATTTACTGTGGTATCAATTCTCAAATAGAATAGCTGATATTAAAAGGAAACATGGAGTAAGGGGTCTATCTCCTAGTAATTTATCCCCTCAAAAGTATGTATTCTTCCCATCTCTTTCAACATAATGAACAAATTGGAAAAGGAAAGGAAGCTCAGTAAAAATTTCTTTTCTTTTGTTTCTGGAAATGCATTTTAACTCCACCAAGAATCCACTCAAAAGGGTGAGGGCTGTACTTACTTTAATGACCTCGTACCATAAGCTGTCCGTTCATGATGAAATTGCAATAACCATTTAGCCAACATGACCTTGTTCCTGGCTTTTACGTTATCTAACAACCTAGCCACCACCTCCCATTTCACACGATGAGAACCTTTCCCCTCATTAACCCCCTCCCTTAAGAATTCCTTTCTCAACTTCTCAAAAACCTACCTAACTGCACTAGGGACTCTAAAAAGGGACATAGAAATAGATCATGTTGTTGTTCAGGACTCATTGAATTGTATTTTTTTTTTTTTTTTGGATAAGAAGACTGAATGAAATGTAAACTTACCATCTATAAAAAAAAAAGGAAAAAAAAAACTCTTCCTGAAATGTAGACATTTTATCAATCTTACATATGACAAAGTCCCACAATGTGAGCTTCCTAGGATTATGACCGAGGGGAAGACCTAAAATAGGAAGAAGAAGAGGCTCCAACCTCACACCCCACCCCAGTGAACTGGAAAGTTAATGTTAACAGAACCACAAATTAGAAAAATATGAGGCAAGTTGGTGTAGATTGTAGAAGTAGAAGTGATTTAGGTTGGATTGAAATTCCTGACATGGGAAGAACAAATGGATGCAAACTTAAATAAAAGTTGGCTGAAGGCATGGAGAACAAATGGATGTTGATTGAAATGACTTCTATTCCATAAAACAAGCTACAGGTTAAGGGGAATTCTAGAGGTTTCCTCCGTCAAAATGACCAACATATTCCTTAGGGTTGGGTGGCCGGTGAACCAGGCGGGTTTAGAGATCTGTAACCTAAAGATTTACAACAGAGCTTTATTGGCCAAGTGGCTTTGGCGCTTCGCCCTTGAGCCCGAATCCTTATGGCATCAGATGATTGTGAACAAGCATGGCCTCCATCCTTTTGATTGGGTGGAGAAGGGGTTCAAGGCACACATCGAAACCCTTGGAAAGACATATCCTTTAAGTTTCCAACTTTTTTTCTATTCACTCGTATTGTTGGGCGGGGGGACAACAAGGAAACGTATTTCTGGGAGGATCAGTGGGTGGGGGAAAGTACTCTTTGTTCTTTGTATCTGCATCTTTATCACTTGTCCTCTTTTAAAAACCTTTCGATTTAAGATCTTTTGGTTTGGTATGAGAATTTCATGTCCTTCTCTTTCGGGTTCCCTCGTAATTTGTCTAATAGGGAAACAACAAGGGTCGCTTCTCTTCTTTCTTTGCTTGAGGGCTACAGTTTTAGGGAGGGGAGGAGGGATTTTCGTGTTTGGAGTCCTAACCCAAGTCAAGGTTTTTCGTGTAAATCCTTGTTTAGTTTGTTGTTGGATCCCTCCCCCATCAGAAAGACGTTTTTGTTGTGGTCTGGATGATTAAGGTTCCTAAGAAAGTTAGATTCTTTATTTGGCAAGTCTTGCTTGGTCGTCTGAACATTATTGATAGGCTTGTTAGGAGGACCTCGCTTGTTCGGCCTTTTTGTTGTATTCTTTGTCGGAAGGTGGAGGAAGACCTCGATCATCTCTTTTGGGATTGTCCGTATGTGTGGGTTGTGTGGTGCTTTTTTCTGCAGGAGTTTGATGTTAGTTTTGCTGGCCAAAGGAGCGTTCGTGTGACGATCGAGGAGTTCCTCCTCCATTTGCCTTTTAGAGAGAAATGTCGTTTTTGTGGTTTGCTGGGGTGTGTGTTGTGCTTTGGGATATTTGGGGGGAGAGGAGTGATCGGGTATTTAGAGGTAGGGAAAGGAACCCTTGTGAGGTTTGGTCCTTAGCTAGATTCATGTGTCCCTTTGGTTTCGATTTTGAAGACCTTTGTAACTATTCTATTGGTAACATTTAATTAGTTGGAACTCCTTCTTTTAGTTGGGGTGTTTTGGTGGTTTGTTTTTTTGTATGCTCTTGTATTCTTTCATTTTTTCTCAATGAAAGTTGTTGCTTTTATTTAAAAAAATGAAAAAAAGGAAAAAGAAAAGAAAAAAAAAAAGAATCCTTAAAATCCATAAAATTATTTTGCATCCTTAGATCTAAAGATGTGCTCTCATTAATCTTTCCCCCCTAGATCTAAAGACTCACTGTAGCCGTAGGTATATTATTAGGGAAATAGAAATGTAGTGAGCAAGTGTACAAATGGTTTGGCCATGGAGAGATAGTGGACACATTCTTTAGATTACTGAGGAATGATCATGTCTAGAAATAGTGGGATGAAAGGGAATGCATCACATGTATCAAAGAGAGACTGAATCTTGGGTTGGAGCATGTTCGTTGCAAGACGATGGCCTAAACTTCTACAAAACGTTTTCAACAAAATGGGGCCTAGTGTAACTGTTTTCTGAAAATCATTTCTGGATTCATGCCCGCCAAATACTGACCTGTTATGTTATTATGCCTGCATTTCTAGAAAAATAAAATAAAATATGATTCATCAACTCACTCAATGTACAGTTTTCAATTCCTTCTGTTATAATCTTAATGACATTGACATGGTTGCACTAATTACTTAAAATATTTGGCCTTGCTGCAATTGTTTGTTATCCTGGACAACACAAAGTCAAGAAGGTAAGTTAAAGTAGGAAGTGTAGGATTTAGATATTAAATTGATTTTCCTAATATGCAAGAATACATAAAGTTGTCACTTTTCTTTTCTTGCAGGCAACTTTGGTGCAATAACTAACCTGGACAACACAGTTACTTCCCCACCAAGACCAGAAGTAAAGCTTGAGGTGGCAAACAAATCTTCTGAACATAAGGAATCTAGTAAAGGTTTTAAAAGCAGCATTCAATGCTTACAAAGCTTTCCAGTACCTCTTCACATTCTTAAAAAAATAATTGTTGTTTGTATTTGAGCCAGCAAATTATTTCTAATTATGCACGCTTGTGGATGCTAATAGTTATATTCAATAATTTGGTCTGATTCTTCCTGTAGATTCTCCCATCATGAGTAATATGGACGTCAAATTTGCAGCACAGTCAGTTGAACCAAAAATTCAAAACACTGACAAGTCTCCCGTGGTTGAAGACTTCGACAAAGAATGCCTTAAACTGACTGGTTAGAAAGGATTACCACTAAACTACTCTACATTAACGAAGATATATTGCTTCAATATTATGGTAACGTTGTGGCACATCTTGGTTTATTTTGACCAGTTATGCTAAGCACGTGGTATGATTTTACTAATATCCTAACCAGTCAAGGTGGTTGAACACTTTAAGGGGGTGTTTGGCCCTTAAAGGGAGTTCCTCCTCAATCTGTCTTTTAGGGAGAAAGTTTGGTTCCTTTGGCTTGCTGGTGTGTGCACGGTTTTGTGGGGTGAGTAGAACAGTAGGGTGTTTAGGGGTGTGGAGAGGGATCCTTGGGAGTTATGGTCCCTTGTTCGCTTTCATATTTTCCTTTGGGCTTCGATTTCGAAAACTTTTGGTAATTATTCTCTAGGTGTGATTTCACAAGAGATAGTCCCCTATTTTGTGGTTTTTTTTTTTTTTGTATGCCTGTGTATTTTTTCATTTTTTAGATGAAAGTTGTTATTTTGTCCTTGGTGAGATTTCATGTTTCGCTTTGTGCTTCGGTTTCAAAGTTTTTATTTATTTATTTATTATTATTTTTTTTTAAATATTCCTTAGGCAACACCATAGTAGGGAACTTTTTTCTTTTAAAGGGGGTGCTTTTGTGGGCTTTTTTTTAATTTAATTGTTTCTTCCTGTATGCCTTTGTATGATTTCATTTTTTTTCTCTATGAAAGTTGTTGATTCTATATAAAAAAAAAGAGTGTTTGGCTCATGAACTTAATAAGTCAAATACATATTTTCCTTTATCAATTAACAAGTCAAATACATATTTTCTCTATGAGAATCGAATTCCCTTCTTGCTTCTTATTACCTTAATTCTTAAGAAACATTTCAATATGCTCAAATCTTTTGTATGGAATTGACTACAAAAAAGGTCATTAGGATTGAATAACTAGTGCATCAAAGGGTTTAGGTGATATCAGTTGGTTGTAGTCAATTTTGGGCTAAAACGGATACCAACCGGCGACCACTGACATATAAGATTTGATCAGTCGGTTTTGGATGAATTTTGGGAGGTTGGTGATGGCAATCGACCATCCATATGATTGGCCGGTAAGTTTTGGTTGGTTTTGTATGTCTGGGAAACTAAACAAAAAAATGCAATAAAGATGAGAAAAAACAAAACAAAGAGAAGACAGAAGCAAAGGAAAGGAAGAAAATAAGAGAAGAGAATAACAAAAAAGAAAAAGGGGAAAGAGATTTTAGAAGAATAAATCAAGAAAGAAAACAATGAATAAAAATCTTATCCAAAAACCAATGAATAAAAAAAATTAAGGATGGAAGAGAAATAGAGAGAGCCCATATTGGCAGCGGCTTTTGGGAAATGGCAGATTTTGGCTAGAAGGAAATAGGAGGGACAATTAGGAGAATCAGATTTTGGGAAATGGCAGGTAAAAGAAGAGAATCAAATTTTGAGATATGGGAGTGGAAGGGAGATTGCCATGTGTGAGAGAAGAGAGGGGAAGAAAACAAGTTTTTCTTCTATGTCGATACTCTTCTGGAAAAGGTCAATTTACATGAGAAGAGGAAAGTTGGGGTATTTGCATTTTTTGCCTGAAACAGTTTTGATTGTGTGAATATAGGAGTTCTTTTTTTTTTTTTTTGTTTAAAGAGCTTGATTCAGGTAGAGACATTAGACGTATCTGTATTTCTTTATTTTTATTTTATTAATTTGGATTGGAGAATTTTCAAGTAATAGGTTTCTCATTGGTGTCTTAATCAGTTAGACCCCCAATATTACACAAGTATAAAAGAAAGGGCAAGAAGGGAATAACACAAGCAATGCTTCCAGGAATGTTGCTGAAGAGGAGGAATTCACCTGGACCCTCAGTTATGTGGGTATAAAAAGAGAATGTTTGGGGATTGGGAAAAGTTGGGTGTATTTTGGTAAAGGCTGCTTAGAGCTTTTAGGAGGTGGAGATATTACTTGCTGGGGAGGAAGTTCACGGTGATTTCTGATTAGAAGGATCTGAAATTTCTGATTGAACAGAGAGAAGTCTAGCCTCAGTTCCAAAAATGGCTCACTAAATTTCATGATTCCGTGTTGGGGGGGGGGGGGGTGCATTCGGGATTTTTCAGAACCTATAAGAGAATGAATGGGGAATTGCATTGGTTGGGAATAAAGGTTGATGTGAAGAAATATGTGGAACTTTTGAGCTCTGCCAACGAAAGCAATGTCTCCAGCGGAACTTTTACAACCTCTACCCCTTCCTAAATTGATTTTAAAAGACTGGACAATGGACTTTATCGAGGGTTGCCGGGGGGGGATGGTGATGGTAGATCGTCCAAGCAAGTTTGCTCACTGTATTATATTGAAGCACCCATTTCTGCCAAGCAAGTAGCTGATGTTTTTATTGGAAGGGTGGTTAGTAAACATGGGGTGCCTAAGTCCCTTATTTCCGACCGTGATAAGATCTTCCTGTGTATTTCTGGGAGGAACTTTTTTTAGACATGGGAACAGTTTTAAAAAGAAGCACGACCTTTCACCCCAGACGGATGGGCAAACGGAGAGAGTTAATAGGTGTTTGGAGACATTCTTAAGATATTTCTGTAATGAGCAGCCGACGAAATGGAATAAATGCATCCCATGGGCAGAATTATGGTATAATACCACTTTCCACGCTCCGCGAAGACTACACCCTAGTGAGTGGTTTATGGTAGGCCACCCCTCCATTGATTTCGTTTGGTGATAAAAAGACCCCGAACAATAGTGCTGAGCAGCTTCTCAAAGAGGGAGATTTAATCATCAACGCCTTGAAGGAGAATTTAGTGATAGCACAGAATAGAATGAAGAAACAGGCAGTCTTACATTGGAGGGAGTTAAACTTTCACGTTGGAGTTGAAGTTTTCTTGAAACTAAGACCCTATCGTCAACATTCATTGGCTACGAAGCGTTGTGAGAAGCTAGCCCCTAAGTTCTATGGTCCCTATTGGGTGGTGGAGAAGATTGGGGAAGTTGCATACTGTTTGGAACTACCACTGGAGGCTAATATCCATAATGTGTTCCATGTATCCAAATTGAAGCTGAAGTTGGGGCAAACATAGAAGGTTCAACATATTGCCCCTGCATACAGAAGAGTTTGAACTCCAAGTTGGCCTGAAGGCGTTTTGGGAGAGATGGAATGATAATGTGGGAGCAAACGAATGGCTGGTGAAATGGAAAGGGCTGTAGATAGTGAAGCCAACATGGGAGTCGGTCTACCTGATGAATCAACAATTTCCTTCTTTCCACCTTGAGGACAAGGTGAGTTTTGAGCCGGGCAGTATTGTAGACCCCAATATTACACACGTATAAAAGAAAGGGCAGGAAGGAATAACACAAGCAAATGCTTTCAGGAATGTTGCTGAAGAGGAGGAATTCACTTGAGGGTCCCACTGTGATGTGGGTATAAAAGCGAATGTTTGGGGATTGGGGAAGTAGGGTTTATCTTGGTAAAGGCTGCTTAGAGCTATTAGGGAGAAGTTTCCAATCTTCTCGAAGTAGTTGGTCGTTTGTCTTTATTACCGTCTCTTACTCTTGTTTCCTTGTTGTTATCCTTGCTGTTTTACATTGAATATATTATATTAGAGTACTTTCTCTGTTTTGCCATTGTTGAGGTTTACTGAGTTTGATGTGGAAGGTTCCTTACATAATCATCCACAACCTTGAGGCTAGTTCCTTTTTGTTTTTTCTCAACATCACCTCCTTTCTTATTTAAAGGAAAAAAGAATGAAAAAAGGACTAGGCTGTAGTTAACTTAGAGAATGTAGTGCCTACTTGGTCGGAAGAATGGAACTTGGAAATAGACTGATTTATGATTGGATAAGATTCAAACGACTTTATTATGAAATTTTTGAATTCGACCATTTCAAGAGTGAAAGCTACATATGAGGTTATTGGCTTCATGCGAAGGATGTGTTTGAGTGCTTGGTTGCATCAAAATGCTAGCTGCATATCTAATCTATTCTATGTATAATAGTAGATGTAGAAAGGAACTTCACGAATGAACTTAAGCTAAACATAGCTGTTGAGGTGAAGATGTTATTGATGGATATGACTTATGAGTGAGGAAAAGGAGCTTAAAGTTATTACCTAGTATGGAAAAAGGCTGGGTATCAACTGTAGTAGTTAATCCAAAGTTGGGAAGAATGCAAATGCGACAATACCTAAGCGGCTAAGCCTCCAAACTTTCAATTCAACACAAAAGGGTAGTATCTTGGTGTACAGTTTTTTGAGCACCTTTTGTATACATTTCTCACTTGGTGCAAATTCACCTTTTTTTTTCTTTTTCAGTGTGATTAAAATCTCAAATCTCTTATATTGTCTTAAAATAGTTTGATGTAATATCTCACTGCAGTTGCCCTTTTGTAATTTCATACATCAGTGAAATTCTAATTGAATGTTTCTCTTAAAAAATGGGTAGTAGTACTGCAGTAGTGATTAGGTAGACCTGCAAATAGGAAGAGAACATGGTTTATGCTTCTTTACAGTGAGAATTCATTGATGTGAGAACAAGGACTCGACAATATTGGTTGTATTTTTTTTTTCTCTGGGGAATGAAAATATCATTTTTTTGTCATACAAATGAATATGATTGCTAGAGGAATCCAAATATGAAATAGTGCCTTATCAACAAGAATAGAAGCAACTAATAACAAATAGAAGTACTGCAATCATCTCCCAAGTTTTTCTTCAATTCATAATCCCATTATCTGTATCTTATCATAATCTTGTTTTTAGTGTGTGCATATATGTTTGGTGTTTTGGGAAAAGGCTTATCTCTTTAGTTCTTTCATGTTATTTTTTTCCCATGTATCTCGCAGTGTTCAGTCAGAATTTGGAGTTCATACTGCCACTCCAATTATGTATGATTATTTATCAGAACTTGGCTACTTCTTTTGATGCTCATAGGTATGCAACATTTGTACAAGAATAAGCTGCAAAATTTCTCCCAGAAGAGAAGCCTCACTTTACCTATGTACACATGTGAGCGTGATGGCCCACCCCATGCTAGTCGCTTCAGATGTAAAGTGGAAATAGATGGAAAGACCTATGAAAGCCCAGAATTTCATGGCACATTGAAAGATGCTGAGAATGCAGTTGCAAAAGTTGCTTTAATGTCTTTATGTCAAGATGGAGCTCAAGAGGCTAGTATTCTAATTTGAACTTTAATGAAAAAGAATAATAATTGCCATGCACATAAATGTGGTTTTTTGTTTGAATGAAATAACCACCTCTCACGTGTTTCTTCTACAAATTTCTGGATGTTTATTTCTCTTATAAATGATAGGATTCTGGTTCTGGCCTTTACAAAAACCTCTTACAAGAGATGGCCCAAAAAGGAGGTCTAGTTTACCAGCTTATTCAACATCACAATCCGGTGAAGTTCATGTACCGGTCTTTGTTTCTACAGTGAAAGTAGGAGAAGAAAATTTCGAAGGGAAACCATCAAGAACTAAGAAACAAGCTGAGATGAGTGCAGCAAAAGTTGCTTATTTTACCATAAAGGAGGGTAAGTGTTATTGGCAATAGTATATTTATTGAGTACTTTTTAGTCAGTTTCTGTTCTTAGCAAAGCTTTTAATCACCTTAAGCATGCACATTTTTTCTCTCTTTAAATTTTGTGATTGAGGTATGCAATGTGTACAAGTTTATGGCGTGATGAGATATAGGAGTCAATGGACTAGAGCATAATATTTAATCCTAAATGTTTAAACTATTAATCACTAAATTATGGATGGCTTGAACTCGCCTTGAGTTTCTTTCCTTAGTTTTCTAGCATTTACTATATTTTGTGCAATTTGCAATCAAGGCAAGCTTGCATCTCCTAGAGAATGAGCTTCTCAAGTCATTTGTCAGTCCTGACTAGGAACTGCAAGTGATCTTCAGTAGGGGTGTAATTGGTTCGGTTTGGTTAGAGTTTCATATAAAACCGGAACTGAATCGCTTATTCGATGTAAGAATAAGTGTAAACCGGTACTGAACTGGTGTCATTGATAACCGAGTCGTCCGAACCGTTTGGCCCGTTGGTTTGATTGGCTCGGATCTTGGTTCGTCGAATACATACATGTTGCGCGCGTGGTTGATCGAAAGCGCCTTTTCATTAGGAAATTAAATACAATTTATACACTCCCTAGATTTGAATCCACATCCTGGTGTTTCTAGGCATGTGCCCCCATCAACCTAACCGGTAATCTTTTGGTTACATTACTGACACTTGATATATTTAGTTTATCGGCCGGTTCGGTTATGCAGTTTACTTTTTTTGGCAAACCCAAACTTGACTGTTATTTTTGGTTTTTTATTTCTCCAACCCGAAATCTTCAAACTGAGCCATTTCAAATCGAACCGATAAAGCGGTTTCGGTCGGTTTGAGTGGTTTCACCGTTTTCTCGGTTTTTCCTTGCATCCCTAATCTCGAGTCCTGTAATTTCAGATCCAAACATGGCAATTGAGAAACAACACAATGATGGAGGTGGTTGTCCCCTTAGACTATTATATTATGTACTCTTTCGCTTGGTTATTACGTATGTTGACGGAAAATTAGGGTTTATGGATTATTATTATTTTCTCTTTTGACATTTTTCATTATGTATTTTTCTTTAGTGTTTTATTTGAGGTCTATTTATTCCTCTATGTGAAAGGTTGTTATGTACTCTGAATTATTCTAATTTACCATATATATTATATAAAATTATCGACATAAATTTCCAATTTTACAAATTGATTGAACATTAGATGAGCTGATGGCATGCAATCAAAACTTTTCAAATTTCATAACTCCATGCATAAACCCTCACCCAAATATGATATAGAAAACTTATTCAAACCTTGAAACATGTTAGATACATTTCAACCTTTAAGTTTATGACTATTGTCATCTTATATTATAAATTTATTGTGCTGCATTAGTCACAGTCTTTTATTCCATGTTTAGGATCTCAAAGCATTTCAACAAGAAAGAGAGCTCCATCGTGTGACCTTGGTATTGAAGTTTCCCGTGATATTGCCACATCATCCCATAATGTTGCTCAAGCAGGTGAGAGCAATGATTACGTCTCAAGGATAGTCTCAAAGCTAGAAGCTGGGAAAAGCTCATCTTCCAAAAGGATATTTGTTTGTCCTCGTCAACCGAATATGACATTTCCGAAGGAAAGTTCAGTATTACCAATAAGTGATGACCAATGGGTAGCATTCTCGGTCGAAACTGGAACTAGTCAATAACTTTGCCATGTATAACTGACTTTTGAATTGTAACCTAACCTTGGTCAGGACTGAAGTATGTCAACTCCTAATGCTTAGATACATATGTATGTATCAAGTATTTAACTCAGAATTGTTGACAATACTTGGAACAACATCGTTGTTATTTGCTTGCTTTTGTGGTTTAGGATTATTCGTAGGCTTAGTTTTTACCTGCAACTTGATCTTCATTGTAAAAAGGTGTATTATAATAATCATATATTATCGGATGTCACTTTGTTTTTGCTTTT

mRNA sequence

TTTGTCATTTTATTACACAACCAATGTTGGATTTGGGGGAACCAAGCTGAAGCAGGAAGTGAAGTCCTTCCTCTCCACAGTCACCATCTTCTTCTCAACTTCTAGGGTTCTTCAATTTCTCTATCTATTTCACTCCATTTTCTCTATTGAAGTCCCTTCATTTCATTCAACATGTTCAAAACAAAGCTTCAAGAACTCTGTCATCGCAAATCTTACAAATTACCTGAATATTCCGTGGTTAAACAAGGCCAAGACCACGACCCACGTTTTGAAGCCACTGTCACCGTCGACGGCAGGCAATTTTGCTCACCCGCTCCTTCTAAATCTTCAAAGCAAGCACAGAACGATGCTGCTAAGCTTGCTTTTGACTTCTTTTCTCTTCCTTCTTTACCTCAACCGCCGGAGCAGCTTTGCCCTCAACCAGTTTTGCCAGAATCGTCTTCTCCCCTGAAACTAATTCCTTCTATTCCCCCATTTTCTCCGTCCTATCTAAATTTATCTTCTTTTCCTCAGCCGTCTTTGCCTTCACAATCGGGCAACTTTGGTGCAATAACTAACCTGGACAACACAGTTACTTCCCCACCAAGACCAGAAGTAAAGCTTGAGGTGGCAAACAAATCTTCTGAACATAAGGAATCTAGTAAAGATTCTCCCATCATGAGTAATATGGACGTCAAATTTGCAGCACAGTCAGTTGAACCAAAAATTCAAAACACTGACAAGTCTCCCGTGGTTGAAGACTTCGACAAAGAATGCCTTAAACTGACTGGTATGCAACATTTGTACAAGAATAAGCTGCAAAATTTCTCCCAGAAGAGAAGCCTCACTTTACCTATGTACACATGTGAGCGTGATGGCCCACCCCATGCTAGTCGCTTCAGATGTAAAGTGGAAATAGATGGAAAGACCTATGAAAGCCCAGAATTTCATGGCACATTGAAAGATGCTGAGAATGCAGTTGCAAAAGTTGCTTTAATGTCTTTATGTCAAGATGGAGCTCAAGAGGATTCTGGTTCTGGCCTTTACAAAAACCTCTTACAAGAGATGGCCCAAAAAGGAGGTCTAGTTTACCAGCTTATTCAACATCACAATCCGGTGAAGTTCATGTACCGGTCTTTGTTTCTACAGTGAAAGTAGGAGAAGAAAATTTCGAAGGGAAACCATCAAGAACTAAGAAACAAGCTGAGATGAGTGCAGCAAAAGTTGCTTATTTTACCATAAAGGAGGGATCTCAAAGCATTTCAACAAGAAAGAGAGCTCCATCGTGTGACCTTGGTATTGAAGTTTCCCGTGATATTGCCACATCATCCCATAATGTTGCTCAAGCAGGTGAGAGCAATGATTACGTCTCAAGGATAGTCTCAAAGCTAGAAGCTGGGAAAAGCTCATCTTCCAAAAGGATATTTGTTTGTCCTCGTCAACCGAATATGACATTTCCGAAGGAAAGTTCAGTATTACCAATAAGTGATGACCAATGGGTAGCATTCTCGGTCGAAACTGGAACTAGTCAATAACTTTGCCATGTATAACTGACTTTTGAATTGTAACCTAACCTTGGTCAGGACTGAAGTATGTCAACTCCTAATGCTTAGATACATATGTATGTATCAAGTATTTAACTCAGAATTGTTGACAATACTTGGAACAACATCGTTGTTATTTGCTTGCTTTTGTGGTTTAGGATTATTCGTAGGCTTAGTTTTTACCTGCAACTTGATCTTCATTGTAAAAAGGTGTATTATAATAATCATATATTATCGGATGTCACTTTGTTTTTGCTTTT

Coding sequence (CDS)

ATGTTCAAAACAAAGCTTCAAGAACTCTGTCATCGCAAATCTTACAAATTACCTGAATATTCCGTGGTTAAACAAGGCCAAGACCACGACCCACGTTTTGAAGCCACTGTCACCGTCGACGGCAGGCAATTTTGCTCACCCGCTCCTTCTAAATCTTCAAAGCAAGCACAGAACGATGCTGCTAAGCTTGCTTTTGACTTCTTTTCTCTTCCTTCTTTACCTCAACCGCCGGAGCAGCTTTGCCCTCAACCAGTTTTGCCAGAATCGTCTTCTCCCCTGAAACTAATTCCTTCTATTCCCCCATTTTCTCCGTCCTATCTAAATTTATCTTCTTTTCCTCAGCCGTCTTTGCCTTCACAATCGGGCAACTTTGGTGCAATAACTAACCTGGACAACACAGTTACTTCCCCACCAAGACCAGAAGTAAAGCTTGAGGTGGCAAACAAATCTTCTGAACATAAGGAATCTAGTAAAGATTCTCCCATCATGAGTAATATGGACGTCAAATTTGCAGCACAGTCAGTTGAACCAAAAATTCAAAACACTGACAAGTCTCCCGTGGTTGAAGACTTCGACAAAGAATGCCTTAAACTGACTGGTATGCAACATTTGTACAAGAATAAGCTGCAAAATTTCTCCCAGAAGAGAAGCCTCACTTTACCTATGTACACATGTGAGCGTGATGGCCCACCCCATGCTAGTCGCTTCAGATGTAAAGTGGAAATAGATGGAAAGACCTATGAAAGCCCAGAATTTCATGGCACATTGAAAGATGCTGAGAATGCAGTTGCAAAAGTTGCTTTAATGTCTTTATGTCAAGATGGAGCTCAAGAGGATTCTGGTTCTGGCCTTTACAAAAACCTCTTACAAGAGATGGCCCAAAAAGGAGGTCTAGTTTACCAGCTTATTCAACATCACAATCCGGTGAAGTTCATGTACCGGTCTTTGTTTCTACAGTGA

Protein sequence

MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGRQFCSPAPSKSSKQAQNDAAKLAFDFFSLPSLPQPPEQLCPQPVLPESSSPLKLIPSIPPFSPSYLNLSSFPQPSLPSQSGNFGAITNLDNTVTSPPRPEVKLEVANKSSEHKESSKDSPIMSNMDVKFAAQSVEPKIQNTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKVEIDGKTYESPEFHGTLKDAENAVAKVALMSLCQDGAQEDSGSGLYKNLLQEMAQKGGLVYQLIQHHNPVKFMYRSLFLQ
Homology
[Close]
BLAST of PI0005109 vs. ExPASy Swiss-Prot
Match: Q5N8Z0 (Double-stranded RNA-binding protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB1 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.2e-22
Identity = 92/301 (30.56%), Postives = 127/301 (42.19%), Query Frame = 0 

Query: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGRQFCSPA-PSKSSKQAQND 60
           M+K++LQELC ++ +  PEY+    G  H P F ATV+V+G +F +P   ++S+K+A N 
Sbjct: 1   MYKSRLQELCQQRRWAPPEYTHRCAGPAHAPLFGATVSVNGVEFRTPEDAARSAKEAHNI 60

Query: 61  AAKLAFDFFSLPSLPQPPEQLCPQPVLPESSSPLKLIPSIPPFSPSYLNLSSFPQPSLPS 120
           AAK AFD  S  SLP PP                                          
Sbjct: 61  AAKAAFDHLS--SLPLPP------------------------------------------ 120

Query: 121 QSGNFGAITNLDNTVTSPPRPEVKLEVANKSSEHKESSKDSPIMSNMDVKFAAQSVEPKI 180
                            PP P          SE++ S                       
Sbjct: 121 -----------------PPPP----------SENQSS----------------------- 180

Query: 181 QNTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCK 240
                                    YK++LQ ++QK+   LP Y   R+GP HASRF+  
Sbjct: 181 -------------------------YKSQLQIYAQKKGKLLPSYQTIREGPGHASRFKSV 182

Query: 241 VEIDGKTYESPEFHGTLKDAENAVAKVALMSLCQDGAQEDS---GSGLYKNLLQEMAQKG 298
           V +DGK +ESPE+  T+K+AE+A AK+ALMSL Q+ +  +        YKNLLQE+AQK 
Sbjct: 241 VTVDGKAFESPEYFHTVKEAESAAAKLALMSLPQEASSSEQVPVQPLSYKNLLQELAQKH 182

[Close]
BLAST of PI0005109 vs. ExPASy Swiss-Prot
Match: Q8H1D4 (Double-stranded RNA-binding protein 4 OS=Arabidopsis thaliana OX=3702 GN=DBR4 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 8.8e-19
Identity = 50/96 (52.08%), Postives = 66/96 (68.75%), Query Frame = 0 

Query: 201 MQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKVEIDGKTYESPEFHGTLKDAE 260
           M H+YK +LQ ++ + +L LP+Y  ER+GPPHA RFRC V   G+T++S EF  TLK AE
Sbjct: 1   MDHVYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAE 60

Query: 261 NAVAKVALMSLCQDGAQEDSGSGL-YKNLLQEMAQK 296
           +A AK+A+ SL     Q   G  + YKNLLQE+AQK
Sbjct: 61  HAAAKIAVASLT---PQSPEGIDVAYKNLLQEIAQK 93

[Close]
BLAST of PI0005109 vs. ExPASy Swiss-Prot
Match: Q9LJF5 (Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DRB3 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 9.7e-18
Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = 0 

Query: 204 LYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKVEIDGKTYESPEFHGTLKDAENAV 263
           +YKN+LQ  +Q+   +LP YTC R+GP HA RF+  V  +G+ +ESP +  TL+ AE++ 
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 264 AKVALMSLCQDGAQED------SGSGLYKNLLQEMAQKGGL 299
           A+VAL +L   G  +         +G+YKNLLQE A + GL
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGL 101

[Close]
BLAST of PI0005109 vs. ExPASy Swiss-Prot
Match: Q0DKP4 (Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB2 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.3e-17
Identity = 53/118 (44.92%), Postives = 71/118 (60.17%), Query Frame = 0 

Query: 204 LYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKVEIDGKTYESPEFHGTLKDAENAV 263
           +YKN+LQ  +Q+    LP Y C R+GP HA RF+  V  +G+T+ESP F  TL+ AE+A 
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPAFCSTLRLAEHAA 60

Query: 264 AKVALMSLCQDG------AQEDSGSGLYKNLLQEMAQKGGL---VYQLIQH---HNPV 310
           A+VAL  L + G      A+    +G+YKNLLQE A + GL   VY  I+    H PV
Sbjct: 61  AEVALNELSKRGPSSSLAAKVLDETGIYKNLLQETAHRAGLKLPVYTTIRSGPGHTPV 118

[Close]
BLAST of PI0005109 vs. ExPASy Swiss-Prot
Match: Q9AV50 (Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=DRB6 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.3e-17
Identity = 47/100 (47.00%), Postives = 66/100 (66.00%), Query Frame = 0 

Query: 204 LYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKVEIDGKTYESPEFHGTLKDAENAV 263
           +YKN+LQ  +Q+    LP YTC R+GP HA RF+  V  +G+ +ESP F  TL+ AE+A 
Sbjct: 1   MYKNQLQELAQRSCFNLPAYTCLREGPDHAPRFKAAVNFNGEQFESPGFFTTLRQAEHAA 60

Query: 264 AKVALMSLCQDG------AQEDSGSGLYKNLLQEMAQKGG 298
           A+VAL +L + G      A+    +G+YKNLLQE+AQ+ G
Sbjct: 61  AEVALAALARRGPSYSLAARILDETGVYKNLLQEVAQRVG 100

[Close]
BLAST of PI0005109 vs. ExPASy TrEMBL
Match: A0A1S3CMT3 (double-stranded RNA-binding protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502699 PE=4 SV=1)

HSP 1 Score: 547.7 bits (1410), Expect = 3.1e-152
Identity = 279/298 (93.62%), Postives = 282/298 (94.63%), Query Frame = 0 

Query: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGRQFCSPAPSKSSKQAQNDA 60
           MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDG+QFCS  PSKSSKQAQNDA
Sbjct: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCSSTPSKSSKQAQNDA 60

Query: 61  AKLAFDFFSLPSLPQPPEQLCPQPVLPESSSPLKLIPSIPPFSPSYLNLSSFPQPSLPSQ 120
           AKLAFDFFSLPSLPQP +QLCPQPVLPESSSP KLIPSI PFSP  L+LSSFPQPSLPSQ
Sbjct: 61  AKLAFDFFSLPSLPQPSQQLCPQPVLPESSSPPKLIPSILPFSPPSLDLSSFPQPSLPSQ 120

Query: 121 SGNFGAITNLDNTVTSPPRPEVKLEVANKSSEHKESSKDSPIMSNMDVKFAAQSVEPKIQ 180
            GNFGAI NLDN VTSPPRPEVKLEVANKSSE KESSKDSPIMSNMDVKFA QSVEPKI 
Sbjct: 121 LGNFGAIANLDNKVTSPPRPEVKLEVANKSSELKESSKDSPIMSNMDVKFAGQSVEPKIL 180

Query: 181 NTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV 240
           NTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV
Sbjct: 181 NTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV 240

Query: 241 EIDGKTYESPEFHGTLKDAENAVAKVALMSLCQDGAQEDSGSGLYKNLLQEMAQKGGL 299
           EIDGKTY SPEFHGTLKDAENAVAKVALM LCQDGAQEDS SGLYKNLLQEMAQKGGL
Sbjct: 241 EIDGKTYGSPEFHGTLKDAENAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGGL 298

[Close]
BLAST of PI0005109 vs. ExPASy TrEMBL
Match: A0A1S3CMN7 (double-stranded RNA-binding protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502699 PE=4 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 1.4e-123
Identity = 240/298 (80.54%), Postives = 243/298 (81.54%), Query Frame = 0 

Query: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGRQFCSPAPSKSSKQAQNDA 60
           MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDG+QFCS  PSKSSKQAQNDA
Sbjct: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCSSTPSKSSKQAQNDA 60

Query: 61  AKLAFDFFSLPSLPQPPEQLCPQPVLPESSSPLKLIPSIPPFSPSYLNLSSFPQPSLPSQ 120
           AKLAFDFFSLPSLPQP +QLCPQPVLPESSSP KLIPSI PFSP  L+LSSFPQPSLPSQ
Sbjct: 61  AKLAFDFFSLPSLPQPSQQLCPQPVLPESSSPPKLIPSILPFSPPSLDLSSFPQPSLPSQ 120

Query: 121 SGNFGAITNLDNTVTSPPRPEVKLEVANKSSEHKESSKDSPIMSNMDVKFAAQSVEPKIQ 180
            GNFGAI NLDN VTSPPRPEVKLEVANKSSE KESSK                      
Sbjct: 121 LGNFGAIANLDNKVTSPPRPEVKLEVANKSSELKESSK---------------------- 180

Query: 181 NTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV 240
                              GMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV
Sbjct: 181 -------------------GMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV 240

Query: 241 EIDGKTYESPEFHGTLKDAENAVAKVALMSLCQDGAQEDSGSGLYKNLLQEMAQKGGL 299
           EIDGKTY SPEFHGTLKDAENAVAKVALM LCQDGAQEDS SGLYKNLLQEMAQKGGL
Sbjct: 241 EIDGKTYGSPEFHGTLKDAENAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGGL 257

[Close]
BLAST of PI0005109 vs. ExPASy TrEMBL
Match: A0A6J1IRS0 (double-stranded RNA-binding protein 4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479924 PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 1.3e-121
Identity = 237/298 (79.53%), Postives = 255/298 (85.57%), Query Frame = 0 

Query: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGRQFCSPAPSKSSKQAQNDA 60
           MFKTKLQELCHRKSY+LP YSVVKQGQDHDPRFEATVTV G +FCS  P KSSKQAQNDA
Sbjct: 1   MFKTKLQELCHRKSYELPVYSVVKQGQDHDPRFEATVTVAGNKFCSQTPCKSSKQAQNDA 60

Query: 61  AKLAFDFFSLPSLPQPPEQLCPQPVLPESSSPLKLIPSIPPFSPSYLNLSSFPQPSLPSQ 120
           AKLAFDFFSLPS P+  E   PQP  PESS PL+ +   P FS   L++SSFPQPSLPSQ
Sbjct: 61  AKLAFDFFSLPSSPK-LEPYHPQPSFPESSPPLEQLRYSPQFSHPSLHISSFPQPSLPSQ 120

Query: 121 SGNFGAITNLDNTVTSPPRPEVKLEVANKSSEHKESSKDSPIMSNMDVKFAAQSVEPKIQ 180
           S  FGA TNLDNTV+ P RP VKLEVAN+SS   ES+KDS I SNM VKF+AQSVEPKIQ
Sbjct: 121 SDTFGATTNLDNTVSYPQRP-VKLEVANESSGLVESTKDSSITSNMGVKFSAQSVEPKIQ 180

Query: 181 NTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV 240
           NTDKSPVV+ FDKEC KLTGM+HLYKNKLQNF+QK++LTLP+YTCERDGPPHASRFRCKV
Sbjct: 181 NTDKSPVVDYFDKECSKLTGMEHLYKNKLQNFAQKKNLTLPVYTCERDGPPHASRFRCKV 240

Query: 241 EIDGKTYESPEFHGTLKDAENAVAKVALMSLCQDGAQEDSGSGLYKNLLQEMAQKGGL 299
           EIDGKTYESPEFH TLKDAENAVAKVAL+S CQDG QED  SGLYKNLLQEMAQK GL
Sbjct: 241 EIDGKTYESPEFHATLKDAENAVAKVALLSSCQDGVQED--SGLYKNLLQEMAQKKGL 294

[Close]
BLAST of PI0005109 vs. ExPASy TrEMBL
Match: A0A6J1IZS6 (double-stranded RNA-binding protein 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479924 PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 1.3e-121
Identity = 237/298 (79.53%), Postives = 255/298 (85.57%), Query Frame = 0 

Query: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGRQFCSPAPSKSSKQAQNDA 60
           MFKTKLQELCHRKSY+LP YSVVKQGQDHDPRFEATVTV G +FCS  P KSSKQAQNDA
Sbjct: 1   MFKTKLQELCHRKSYELPVYSVVKQGQDHDPRFEATVTVAGNKFCSQTPCKSSKQAQNDA 60

Query: 61  AKLAFDFFSLPSLPQPPEQLCPQPVLPESSSPLKLIPSIPPFSPSYLNLSSFPQPSLPSQ 120
           AKLAFDFFSLPS P+  E   PQP  PESS PL+ +   P FS   L++SSFPQPSLPSQ
Sbjct: 61  AKLAFDFFSLPSSPK-LEPYHPQPSFPESSPPLEQLRYSPQFSHPSLHISSFPQPSLPSQ 120

Query: 121 SGNFGAITNLDNTVTSPPRPEVKLEVANKSSEHKESSKDSPIMSNMDVKFAAQSVEPKIQ 180
           S  FGA TNLDNTV+ P RP VKLEVAN+SS   ES+KDS I SNM VKF+AQSVEPKIQ
Sbjct: 121 SDTFGATTNLDNTVSYPQRP-VKLEVANESSGLVESTKDSSITSNMGVKFSAQSVEPKIQ 180

Query: 181 NTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV 240
           NTDKSPVV+ FDKEC KLTGM+HLYKNKLQNF+QK++LTLP+YTCERDGPPHASRFRCKV
Sbjct: 181 NTDKSPVVDYFDKECSKLTGMEHLYKNKLQNFAQKKNLTLPVYTCERDGPPHASRFRCKV 240

Query: 241 EIDGKTYESPEFHGTLKDAENAVAKVALMSLCQDGAQEDSGSGLYKNLLQEMAQKGGL 299
           EIDGKTYESPEFH TLKDAENAVAKVAL+S CQDG QED  SGLYKNLLQEMAQK GL
Sbjct: 241 EIDGKTYESPEFHATLKDAENAVAKVALLSSCQDGVQED--SGLYKNLLQEMAQKKGL 294

[Close]
BLAST of PI0005109 vs. ExPASy TrEMBL
Match: A0A6J1EVN0 (double-stranded RNA-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436989 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 1.4e-120
Identity = 236/298 (79.19%), Postives = 254/298 (85.23%), Query Frame = 0 

Query: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGRQFCSPAPSKSSKQAQNDA 60
           MFKTKLQELCHRKSY+LP YSVVKQGQDHDPRFEATVTV G +FCS  P KSSKQAQNDA
Sbjct: 1   MFKTKLQELCHRKSYELPVYSVVKQGQDHDPRFEATVTVAGNKFCSQTPCKSSKQAQNDA 60

Query: 61  AKLAFDFFSLPSLPQPPEQLCPQPVLPESSSPLKLIPSIPPFSPSYLNLSSFPQPSLPSQ 120
           AKLAFDFFSLPS P+  E   PQP  PESS PL+ +   P FS   L++SSFPQPSLPSQ
Sbjct: 61  AKLAFDFFSLPSSPK-LEPFHPQPSFPESSPPLEQLRYSPQFSHPSLHISSFPQPSLPSQ 120

Query: 121 SGNFGAITNLDNTVTSPPRPEVKLEVANKSSEHKESSKDSPIMSNMDVKFAAQSVEPKIQ 180
           S  FGA +NLDN V+ P RPE KLEVAN+ SE  ES+KDS I SNMDVKF+AQSVEPKIQ
Sbjct: 121 SDTFGATSNLDNPVSYPLRPE-KLEVANECSELVESTKDSSITSNMDVKFSAQSVEPKIQ 180

Query: 181 NTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV 240
           NTDKSPVV+ FDKEC KLTGMQHLYKNKLQNF+QK++LTLP+YTCERDGPPHASRFR KV
Sbjct: 181 NTDKSPVVDYFDKECSKLTGMQHLYKNKLQNFAQKKNLTLPVYTCERDGPPHASRFRSKV 240

Query: 241 EIDGKTYESPEFHGTLKDAENAVAKVALMSLCQDGAQEDSGSGLYKNLLQEMAQKGGL 299
           EIDGKTYESPEFH TLKDAENAVAKVAL+S CQDG QED  SGLYKNLLQEMAQK GL
Sbjct: 241 EIDGKTYESPEFHATLKDAENAVAKVALLSSCQDGVQED--SGLYKNLLQEMAQKKGL 294

[Close]
BLAST of PI0005109 vs. NCBI nr
Match: XP_008464954.1 (PREDICTED: double-stranded RNA-binding protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 547.7 bits (1410), Expect = 6.4e-152
Identity = 279/298 (93.62%), Postives = 282/298 (94.63%), Query Frame = 0 

Query: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGRQFCSPAPSKSSKQAQNDA 60
           MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDG+QFCS  PSKSSKQAQNDA
Sbjct: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCSSTPSKSSKQAQNDA 60

Query: 61  AKLAFDFFSLPSLPQPPEQLCPQPVLPESSSPLKLIPSIPPFSPSYLNLSSFPQPSLPSQ 120
           AKLAFDFFSLPSLPQP +QLCPQPVLPESSSP KLIPSI PFSP  L+LSSFPQPSLPSQ
Sbjct: 61  AKLAFDFFSLPSLPQPSQQLCPQPVLPESSSPPKLIPSILPFSPPSLDLSSFPQPSLPSQ 120

Query: 121 SGNFGAITNLDNTVTSPPRPEVKLEVANKSSEHKESSKDSPIMSNMDVKFAAQSVEPKIQ 180
            GNFGAI NLDN VTSPPRPEVKLEVANKSSE KESSKDSPIMSNMDVKFA QSVEPKI 
Sbjct: 121 LGNFGAIANLDNKVTSPPRPEVKLEVANKSSELKESSKDSPIMSNMDVKFAGQSVEPKIL 180

Query: 181 NTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV 240
           NTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV
Sbjct: 181 NTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV 240

Query: 241 EIDGKTYESPEFHGTLKDAENAVAKVALMSLCQDGAQEDSGSGLYKNLLQEMAQKGGL 299
           EIDGKTY SPEFHGTLKDAENAVAKVALM LCQDGAQEDS SGLYKNLLQEMAQKGGL
Sbjct: 241 EIDGKTYGSPEFHGTLKDAENAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGGL 298

[Close]
BLAST of PI0005109 vs. NCBI nr
Match: XP_004141127.1 (double-stranded RNA-binding protein 1 [Cucumis sativus] >KAE8651270.1 hypothetical protein Csa_001302 [Cucumis sativus])

HSP 1 Score: 545.4 bits (1404), Expect = 3.2e-151
Identity = 278/298 (93.29%), Postives = 284/298 (95.30%), Query Frame = 0 

Query: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGRQFCSPAPSKSSKQAQNDA 60
           MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDG+QFCSP PSKSSKQAQNDA
Sbjct: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCSPTPSKSSKQAQNDA 60

Query: 61  AKLAFDFFSLPSLPQPPEQLCPQPVLPESSSPLKLIPSIPPFSPSYLNLSSFPQPSLPSQ 120
           AKLAFDFFSLPSLPQPPEQLCPQP+LP+SSSP KLIPSIPPF PS LNLSSFPQPSL SQ
Sbjct: 61  AKLAFDFFSLPSLPQPPEQLCPQPLLPQSSSPPKLIPSIPPFPPS-LNLSSFPQPSLTSQ 120

Query: 121 SGNFGAITNLDNTVTSPPRPEVKLEVANKSSEHKESSKDSPIMSNMDVKFAAQSVEPKIQ 180
            GNFGAITNLDN VTSPPRPEVK EV+ KSSE KESSKDSPIMSNMDVKF AQSVEP+IQ
Sbjct: 121 LGNFGAITNLDNKVTSPPRPEVKHEVSYKSSELKESSKDSPIMSNMDVKFTAQSVEPRIQ 180

Query: 181 NTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV 240
           NT+KSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKR LTLPMYTCERDGPPHASRFRCKV
Sbjct: 181 NTNKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKV 240

Query: 241 EIDGKTYESPEFHGTLKDAENAVAKVALMSLCQDGAQEDSGSGLYKNLLQEMAQKGGL 299
           EIDGKTYES EFHGTLKDAENAVAKVALMSLCQDGAQEDS SGLYKNLLQEMAQKGGL
Sbjct: 241 EIDGKTYESLEFHGTLKDAENAVAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGL 297

[Close]
BLAST of PI0005109 vs. NCBI nr
Match: XP_038904852.1 (double-stranded RNA-binding protein 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 491.9 bits (1265), Expect = 4.2e-135
Identity = 254/301 (84.39%), Postives = 271/301 (90.03%), Query Frame = 0 

Query: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGRQFCSPAPSKSSKQAQNDA 60
           MFKT+LQELCHRKSY+LPEYSVVKQGQDHDPRFEATVTVDG+QF S  P KSSKQAQN+A
Sbjct: 1   MFKTQLQELCHRKSYQLPEYSVVKQGQDHDPRFEATVTVDGKQFSSLVPCKSSKQAQNEA 60

Query: 61  AKLAFDFFSLPSLPQP---PEQLCPQPVLPESSSPLKLIPSIPPFSPSYLNLSSFPQPSL 120
           AK+AFDFFSLPS PQP   P+  CPQP+LPESS P KLIP IPPFS S L++SSFPQP+L
Sbjct: 61  AKIAFDFFSLPSSPQPPLQPDHSCPQPLLPESSPPPKLIPCIPPFSHSSLDVSSFPQPTL 120

Query: 121 PSQSGNFGAITNLDNTVTSPPRPEVKLEVANKSSEHKESSKDSPIMSNMDVKFAAQSVEP 180
           PS  G+ GAITNLDNTVTSP RPEV LEVAN+S E ++S KDS IMSNMDVKFAAQ VEP
Sbjct: 121 PSHLGSIGAITNLDNTVTSPLRPEVTLEVANESFELEKSPKDSSIMSNMDVKFAAQLVEP 180

Query: 181 KIQNTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFR 240
           KIQNTDKSPVVEDFDKECLKLTGMQHLYKNKLQN +QKR L+LPMYTCERDGPPHASRFR
Sbjct: 181 KIQNTDKSPVVEDFDKECLKLTGMQHLYKNKLQNLAQKRGLSLPMYTCERDGPPHASRFR 240

Query: 241 CKVEIDGKTYESPEFHGTLKDAENAVAKVALMSLCQDGAQEDSGSGLYKNLLQEMAQKGG 299
           CKVEIDGKTYESPEFHGTLKDAENAVAKVAL+SLCQDGAQED  SGLYKNLLQEMAQK G
Sbjct: 241 CKVEIDGKTYESPEFHGTLKDAENAVAKVALLSLCQDGAQED--SGLYKNLLQEMAQKRG 299

[Close]
BLAST of PI0005109 vs. NCBI nr
Match: XP_038904854.1 (double-stranded RNA-binding protein 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 460.7 bits (1184), Expect = 1.0e-125
Identity = 242/301 (80.40%), Postives = 259/301 (86.05%), Query Frame = 0 

Query: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGRQFCSPAPSKSSKQAQNDA 60
           MFKT+LQELCHRKSY+LPEYSVVKQGQDHDPRFEATVTVDG+QF S  P KSSKQAQN+A
Sbjct: 1   MFKTQLQELCHRKSYQLPEYSVVKQGQDHDPRFEATVTVDGKQFSSLVPCKSSKQAQNEA 60

Query: 61  AKLAFDFFSLPSLPQP---PEQLCPQPVLPESSSPLKLIPSIPPFSPSYLNLSSFPQPSL 120
           AK+AFDFFSLPS PQP   P+  CPQP+LPESS P KLIP IPPFS S L++SSFPQP+L
Sbjct: 61  AKIAFDFFSLPSSPQPPLQPDHSCPQPLLPESSPPPKLIPCIPPFSHSSLDVSSFPQPTL 120

Query: 121 PSQSGNFGAITNLDNTVTSPPRPEVKLEVANKSSEHKESSKDSPIMSNMDVKFAAQSVEP 180
           PS  G+ GAITNLDNTVTSP RPEV LEVAN+S E ++S K             AQ VEP
Sbjct: 121 PSHLGSIGAITNLDNTVTSPLRPEVTLEVANESFELEKSPK-------------AQLVEP 180

Query: 181 KIQNTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFR 240
           KIQNTDKSPVVEDFDKECLKLTGMQHLYKNKLQN +QKR L+LPMYTCERDGPPHASRFR
Sbjct: 181 KIQNTDKSPVVEDFDKECLKLTGMQHLYKNKLQNLAQKRGLSLPMYTCERDGPPHASRFR 240

Query: 241 CKVEIDGKTYESPEFHGTLKDAENAVAKVALMSLCQDGAQEDSGSGLYKNLLQEMAQKGG 299
           CKVEIDGKTYESPEFHGTLKDAENAVAKVAL+SLCQDGAQED  SGLYKNLLQEMAQK G
Sbjct: 241 CKVEIDGKTYESPEFHGTLKDAENAVAKVALLSLCQDGAQED--SGLYKNLLQEMAQKRG 286

[Close]
BLAST of PI0005109 vs. NCBI nr
Match: XP_008464955.1 (PREDICTED: double-stranded RNA-binding protein 1 isoform X2 [Cucumis melo])

HSP 1 Score: 452.6 bits (1163), Expect = 2.8e-123
Identity = 240/298 (80.54%), Postives = 243/298 (81.54%), Query Frame = 0 

Query: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGRQFCSPAPSKSSKQAQNDA 60
           MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDG+QFCS  PSKSSKQAQNDA
Sbjct: 1   MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCSSTPSKSSKQAQNDA 60

Query: 61  AKLAFDFFSLPSLPQPPEQLCPQPVLPESSSPLKLIPSIPPFSPSYLNLSSFPQPSLPSQ 120
           AKLAFDFFSLPSLPQP +QLCPQPVLPESSSP KLIPSI PFSP  L+LSSFPQPSLPSQ
Sbjct: 61  AKLAFDFFSLPSLPQPSQQLCPQPVLPESSSPPKLIPSILPFSPPSLDLSSFPQPSLPSQ 120

Query: 121 SGNFGAITNLDNTVTSPPRPEVKLEVANKSSEHKESSKDSPIMSNMDVKFAAQSVEPKIQ 180
            GNFGAI NLDN VTSPPRPEVKLEVANKSSE KESSK                      
Sbjct: 121 LGNFGAIANLDNKVTSPPRPEVKLEVANKSSELKESSK---------------------- 180

Query: 181 NTDKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV 240
                              GMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV
Sbjct: 181 -------------------GMQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKV 240

Query: 241 EIDGKTYESPEFHGTLKDAENAVAKVALMSLCQDGAQEDSGSGLYKNLLQEMAQKGGL 299
           EIDGKTY SPEFHGTLKDAENAVAKVALM LCQDGAQEDS SGLYKNLLQEMAQKGGL
Sbjct: 241 EIDGKTYGSPEFHGTLKDAENAVAKVALMCLCQDGAQEDSDSGLYKNLLQEMAQKGGL 257

[Close]
BLAST of PI0005109 vs. TAIR 10
Match: AT3G62800.1 (double-stranded-RNA-binding protein 4 )

HSP 1 Score: 95.9 bits (237), Expect = 6.2e-20
Identity = 50/96 (52.08%), Postives = 66/96 (68.75%), Query Frame = 0 

Query: 201 MQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKVEIDGKTYESPEFHGTLKDAE 260
           M H+YK +LQ ++ + +L LP+Y  ER+GPPHA RFRC V   G+T++S EF  TLK AE
Sbjct: 1   MDHVYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAE 60

Query: 261 NAVAKVALMSLCQDGAQEDSGSGL-YKNLLQEMAQK 296
           +A AK+A+ SL     Q   G  + YKNLLQE+AQK
Sbjct: 61  HAAAKIAVASLT---PQSPEGIDVAYKNLLQEIAQK 93

[Close]
BLAST of PI0005109 vs. TAIR 10
Match: AT3G62800.2 (double-stranded-RNA-binding protein 4 )

HSP 1 Score: 95.9 bits (237), Expect = 6.2e-20
Identity = 50/96 (52.08%), Postives = 66/96 (68.75%), Query Frame = 0 

Query: 201 MQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKVEIDGKTYESPEFHGTLKDAE 260
           M H+YK +LQ ++ + +L LP+Y  ER+GPPHA RFRC V   G+T++S EF  TLK AE
Sbjct: 1   MDHVYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAE 60

Query: 261 NAVAKVALMSLCQDGAQEDSGSGL-YKNLLQEMAQK 296
           +A AK+A+ SL     Q   G  + YKNLLQE+AQK
Sbjct: 61  HAAAKIAVASLT---PQSPEGIDVAYKNLLQEIAQK 93

[Close]
BLAST of PI0005109 vs. TAIR 10
Match: AT3G62800.3 (double-stranded-RNA-binding protein 4 )

HSP 1 Score: 95.9 bits (237), Expect = 6.2e-20
Identity = 50/96 (52.08%), Postives = 66/96 (68.75%), Query Frame = 0 

Query: 201 MQHLYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKVEIDGKTYESPEFHGTLKDAE 260
           M H+YK +LQ ++ + +L LP+Y  ER+GPPHA RFRC V   G+T++S EF  TLK AE
Sbjct: 1   MDHVYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAE 60

Query: 261 NAVAKVALMSLCQDGAQEDSGSGL-YKNLLQEMAQK 296
           +A AK+A+ SL     Q   G  + YKNLLQE+AQK
Sbjct: 61  HAAAKIAVASLT---PQSPEGIDVAYKNLLQEIAQK 93

[Close]
BLAST of PI0005109 vs. TAIR 10
Match: AT3G26932.1 (dsRNA-binding protein 3 )

HSP 1 Score: 92.4 bits (228), Expect = 6.9e-19
Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = 0 

Query: 204 LYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKVEIDGKTYESPEFHGTLKDAENAV 263
           +YKN+LQ  +Q+   +LP YTC R+GP HA RF+  V  +G+ +ESP +  TL+ AE++ 
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 264 AKVALMSLCQDGAQED------SGSGLYKNLLQEMAQKGGL 299
           A+VAL +L   G  +         +G+YKNLLQE A + GL
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGL 101

[Close]
BLAST of PI0005109 vs. TAIR 10
Match: AT3G26932.2 (dsRNA-binding protein 3 )

HSP 1 Score: 92.4 bits (228), Expect = 6.9e-19
Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = 0 

Query: 204 LYKNKLQNFSQKRSLTLPMYTCERDGPPHASRFRCKVEIDGKTYESPEFHGTLKDAENAV 263
           +YKN+LQ  +Q+   +LP YTC R+GP HA RF+  V  +G+ +ESP +  TL+ AE++ 
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 264 AKVALMSLCQDGAQED------SGSGLYKNLLQEMAQKGGL 299
           A+VAL +L   G  +         +G+YKNLLQE A + GL
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGL 101

The following BLAST results are available for this feature:
BLAST of PI0005109 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q5N8Z02.2e-2230.56Double-stranded RNA-binding protein 1 OS=Oryza sativa subsp. japonica OX=39947 G... [more]
Q8H1D48.8e-1952.08Double-stranded RNA-binding protein 4 OS=Arabidopsis thaliana OX=3702 GN=DBR4 PE... [more]
Q9LJF59.7e-1843.56Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DRB3 PE... [more]
Q0DKP41.3e-1744.92Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 G... [more]
Q9AV501.3e-1747.00Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica OX=39947 G... [more]
BLAST of PI0005109 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CMT33.1e-15293.62double-stranded RNA-binding protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A1S3CMN71.4e-12380.54double-stranded RNA-binding protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A6J1IRS01.3e-12179.53double-stranded RNA-binding protein 4-like isoform X1 OS=Cucurbita maxima OX=366... [more]
A0A6J1IZS61.3e-12179.53double-stranded RNA-binding protein 1-like isoform X2 OS=Cucurbita maxima OX=366... [more]
A0A6J1EVN01.4e-12079.19double-stranded RNA-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
BLAST of PI0005109 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008464954.16.4e-15293.62PREDICTED: double-stranded RNA-binding protein 1 isoform X1 [Cucumis melo][more]
XP_004141127.13.2e-15193.29double-stranded RNA-binding protein 1 [Cucumis sativus] >KAE8651270.1 hypothetic... [more]
XP_038904852.14.2e-13584.39double-stranded RNA-binding protein 1-like isoform X1 [Benincasa hispida][more]
XP_038904854.11.0e-12580.40double-stranded RNA-binding protein 1-like isoform X2 [Benincasa hispida][more]
XP_008464955.12.8e-12380.54PREDICTED: double-stranded RNA-binding protein 1 isoform X2 [Cucumis melo][more]
BLAST of PI0005109 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G62800.16.2e-2052.08double-stranded-RNA-binding protein 4 [more]
AT3G62800.26.2e-2052.08double-stranded-RNA-binding protein 4 [more]
AT3G62800.36.2e-2052.08double-stranded-RNA-binding protein 4 [more]
AT3G26932.16.9e-1943.56dsRNA-binding protein 3 [more]
AT3G26932.26.9e-1943.56dsRNA-binding protein 3 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014720Double-stranded RNA-binding domainSMARTSM00358DRBM_3coord: 2..69
e-value: 8.8E-15
score: 65.1
coord: 205..272
e-value: 1.1E-13
score: 61.5
IPR014720Double-stranded RNA-binding domainPFAMPF00035dsrmcoord: 205..268
e-value: 1.6E-12
score: 47.9
coord: 3..65
e-value: 5.2E-15
score: 55.9
IPR014720Double-stranded RNA-binding domainPROSITEPS50137DS_RBDcoord: 1..70
score: 14.393009
IPR014720Double-stranded RNA-binding domainPROSITEPS50137DS_RBDcoord: 204..273
score: 11.795446
NoneNo IPR availableGENE3D3.30.160.20coord: 201..271
e-value: 3.4E-23
score: 83.7
NoneNo IPR availableGENE3D3.30.160.20coord: 1..69
e-value: 4.6E-21
score: 76.8
NoneNo IPR availablePANTHERPTHR46031FAMILY NOT NAMEDcoord: 1..298
NoneNo IPR availablePANTHERPTHR46031:SF16DOUBLE-STRANDED RNA-BINDING PROTEIN 4coord: 1..298
NoneNo IPR availableSUPERFAMILY54768dsRNA-binding domain-likecoord: 2..97
NoneNo IPR availableSUPERFAMILY54768dsRNA-binding domain-likecoord: 199..271
IPR044450AtDRB-like, first double-stranded RNA binding domain, plantCDDcd19907DSRM_AtDRB-like_rpt1coord: 204..271
e-value: 6.88221E-29
score: 104.095

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0005109.1PI0005109.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003725 double-stranded RNA binding