PI0005104 (gene) Melon (PI 482460) v1

Overview


Name	PI0005104
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	ATP synthase subunit e, mitochondrial
Location	chr01: 5604682 .. 5605750 (-)
RNA-Seq Expression	PI0005104
Synteny	PI0005104

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCTTCCTCCAGGCCCCTATTCTGGAGTCAGCACTCTCGCTTTGGTATGTTTTTCTTTTTTTTTTTTCCTATCGTTTTCATGAAATTTTCGGTCTAAACATTTCATGTTGAAATTGCTATTTGTGGATCTGACTTTGGATTTAATAATCGAAATTAATGTTCATATTCAACGTTTTTTATCCTTCACAGGTTGCTCGTGCTTCGGCATTCTCTGTTGGACTTGTCTACGGAAGCCTCAAGCTCAAGTACCTTCAGGTTTGTTCATCTGGGATCTATTTCTGTTTGCTTGTTTTTGTCGACACTCTTGGATTTGTTTCGATTACAGTTGTAGATGCAGGGTATATTTTTAGGGCTATATGTATTTTTCAATCTGAATGTCCCTGTGCTTTGAGATTAGTTTCAAGTGTATTCTTGAAGAATTTTATTTCTACCCTTAAGCCTTGAAGCCTTTAAATTGATTCAAATATGCCCTTTGAGAATTTTACCTTTAAAAAGAGCTATGAAAATTGATGTGGTCTGGCTGCTTAGTCGTAAGTGTAAATTCGCAGACATGTAGTTTGATCAAGTGATGGTCTTGATTAATTTATCATTTTGAACATTTTTTTCTTGAAGCACAATTCGTCTATTTATGTTCACATAATAGTTGATAATTATATTAAAATAGATTATTTGGTCTAAATGTCTAATGCCATGAAAGGATCAATTGTTTTCAATGGGCTGTCAAATATCTTTGAACTTGGAATGAAATTATTTTCAAAGTTAGAACATAGAGTTTGGTTTTTGAACCATGGTAAATATGCTTGGCCTTGGACTTATTTATGAAGTTCCATTAATATACTCAATGACGACCAATGGTTTAGTCTCCTATTTCTAGTTTCATTCCTTTTCAATTTCAGTTTGATTTATAGGAGTTGTGATCTTAGAATCTCATGTTATTTCTAGCTGTCTTTTGAGGCCATTCTAAATGTACCTGTCTGATTTAACAATTTTATTTCCATTACTATTTTATTACCACAGGCGAAGGCAAACTCTCACAAGAAAGCTGAAGCAAAGGCTCATCATTGA

mRNA sequence

ATGGCGCTTCCTCCAGGCCCCTATTCTGGAGTCAGCACTCTCGCTTTGGTTGCTCGTGCTTCGGCATTCTCTGTTGGACTTGTCTACGGAAGCCTCAAGCTCAAGTACCTTCAGGCGAAGGCAAACTCTCACAAGAAAGCTGAAGCAAAGGCTCATCATTGA

Coding sequence (CDS)

ATGGCGCTTCCTCCAGGCCCCTATTCTGGAGTCAGCACTCTCGCTTTGGTTGCTCGTGCTTCGGCATTCTCTGTTGGACTTGTCTACGGAAGCCTCAAGCTCAAGTACCTTCAGGCGAAGGCAAACTCTCACAAGAAAGCTGAAGCAAAGGCTCATCATTGA

Protein sequence

MALPPGPYSGVSTLALVARASAFSVGLVYGSLKLKYLQAKANSHKKAEAKAHH

Homology

[Close]

BLAST of PI0005104 vs. ExPASy TrEMBL
Match: A0A0A0K2E7 (ATP synthase subunit e, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_7G007920 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.9e-17
Identity = 51/53 (96.23%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 1  MALPPGPYSGVSTLALVARASAFSVGLVYGSLKLKYLQAKANSHKKAEAKAHH 54
          MALPPGPYSG STLALVARASAFSVGLVYGSLKLKYLQAKA SHKKAEAKAHH
Sbjct: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 53

[Close]

BLAST of PI0005104 vs. ExPASy TrEMBL
Match: A0A6J1GMM8 (ATP synthase subunit e, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111455357 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.4e-17
Identity = 50/53 (94.34%), Postives = 50/53 (94.34%), Query Frame = 0


Query: 1  MALPPGPYSGVSTLALVARASAFSVGLVYGSLKLKYLQAKANSHKKAEAKAHH 54
          M LPPGPYSG STLALVARASAFSVGLVYGSLKLKYLQAKA SHKKAEAKAHH
Sbjct: 1  MTLPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 53

[Close]

BLAST of PI0005104 vs. ExPASy TrEMBL
Match: A0A7J6FXI7 (ATP synthase subunit e, mitochondrial OS=Cannabis sativa OX=3483 GN=F8388_024057 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.6e-16
Identity = 49/53 (92.45%), Postives = 50/53 (94.34%), Query Frame = 0


Query: 1  MALPPGPYSGVSTLALVARASAFSVGLVYGSLKLKYLQAKANSHKKAEAKAHH 54
          MA PPGPYSG STLALVARASAFS+GLVYGSLKLKYLQAKA SHKKAEAKAHH
Sbjct: 42 MAPPPGPYSGTSTLALVARASAFSIGLVYGSLKLKYLQAKAKSHKKAEAKAHH 94

[Close]

BLAST of PI0005104 vs. ExPASy TrEMBL
Match: A0A7J6GZJ8 (ATP synthase subunit e, mitochondrial OS=Cannabis sativa OX=3483 GN=G4B88_013239 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.6e-16
Identity = 49/53 (92.45%), Postives = 50/53 (94.34%), Query Frame = 0


Query: 1  MALPPGPYSGVSTLALVARASAFSVGLVYGSLKLKYLQAKANSHKKAEAKAHH 54
          MA PPGPYSG STLALVARASAFS+GLVYGSLKLKYLQAKA SHKKAEAKAHH
Sbjct: 42 MAPPPGPYSGTSTLALVARASAFSIGLVYGSLKLKYLQAKAKSHKKAEAKAHH 94

[Close]

BLAST of PI0005104 vs. ExPASy TrEMBL
Match: A0A6J1C358 (ATP synthase subunit e, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111008022 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.0e-16
Identity = 49/53 (92.45%), Postives = 49/53 (92.45%), Query Frame = 0


Query: 1  MALPPGPYSGVSTLALVARASAFSVGLVYGSLKLKYLQAKANSHKKAEAKAHH 54
          MALPPGPYSG STLALVARASAFS GLVYGS KLKYLQAKA SHKKAEAKAHH
Sbjct: 1  MALPPGPYSGTSTLALVARASAFSFGLVYGSFKLKYLQAKAKSHKKAEAKAHH 53

[Close]

BLAST of PI0005104 vs. NCBI nr
Match: XP_038887516.1 (uncharacterized protein LOC120077638 [Benincasa hispida] >KGN43194.1 hypothetical protein Csa_020535 [Cucumis sativus])

HSP 1 Score: 97.4 bits (241), Expect = 3.8e-17
Identity = 51/53 (96.23%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 1  MALPPGPYSGVSTLALVARASAFSVGLVYGSLKLKYLQAKANSHKKAEAKAHH 54
          MALPPGPYSG STLALVARASAFSVGLVYGSLKLKYLQAKA SHKKAEAKAHH
Sbjct: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 53

[Close]

BLAST of PI0005104 vs. NCBI nr
Match: KAG7022252.1 (hypothetical protein SDJN02_15983 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 96.7 bits (239), Expect = 6.5e-17
Identity = 51/53 (96.23%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 1  MALPPGPYSGVSTLALVARASAFSVGLVYGSLKLKYLQAKANSHKKAEAKAHH 54
          MALPPGPYSG STLALVARASAFSVGLVYGSLKLKYLQAKA SHKKAEAKAHH
Sbjct: 1  MALPPGPYSGSSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 53

[Close]

BLAST of PI0005104 vs. NCBI nr
Match: XP_022952755.1 (uncharacterized protein LOC111455357 [Cucurbita moschata])

HSP 1 Score: 95.9 bits (237), Expect = 1.1e-16
Identity = 50/53 (94.34%), Postives = 50/53 (94.34%), Query Frame = 0


Query: 1  MALPPGPYSGVSTLALVARASAFSVGLVYGSLKLKYLQAKANSHKKAEAKAHH 54
          M LPPGPYSG STLALVARASAFSVGLVYGSLKLKYLQAKA SHKKAEAKAHH
Sbjct: 1  MTLPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 53

[Close]

BLAST of PI0005104 vs. NCBI nr
Match: KAF4388402.1 (hypothetical protein G4B88_013239 [Cannabis sativa])

HSP 1 Score: 94.4 bits (233), Expect = 3.2e-16
Identity = 49/53 (92.45%), Postives = 50/53 (94.34%), Query Frame = 0


Query: 1  MALPPGPYSGVSTLALVARASAFSVGLVYGSLKLKYLQAKANSHKKAEAKAHH 54
          MA PPGPYSG STLALVARASAFS+GLVYGSLKLKYLQAKA SHKKAEAKAHH
Sbjct: 42 MAPPPGPYSGTSTLALVARASAFSIGLVYGSLKLKYLQAKAKSHKKAEAKAHH 94

[Close]

BLAST of PI0005104 vs. NCBI nr
Match: XP_030478880.1 (uncharacterized protein LOC115695925 [Cannabis sativa])

HSP 1 Score: 94.4 bits (233), Expect = 3.2e-16
Identity = 49/53 (92.45%), Postives = 50/53 (94.34%), Query Frame = 0


Query: 1  MALPPGPYSGVSTLALVARASAFSVGLVYGSLKLKYLQAKANSHKKAEAKAHH 54
          MA PPGPYSG STLALVARASAFS+GLVYGSLKLKYLQAKA SHKKAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFSIGLVYGSLKLKYLQAKAKSHKKAEAKAHH 53

[Close]

BLAST of PI0005104 vs. TAIR 10
Match: AT3G01130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G15320.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.2 bits (178), Expect = 7.2e-14
Identity = 39/53 (73.58%), Postives = 44/53 (83.02%), Query Frame = 0


Query: 1  MALPPGPYSGVSTLALVARASAFSVGLVYGSLKLKYLQAKANSHKKAEAKAHH 54
          MA PPG YSG STLALVARASAF +GL+YG++KLK L+ K NS  KAEAKAHH
Sbjct: 1  MAPPPGLYSGTSTLALVARASAFGLGLIYGNIKLKALKIKKNSQIKAEAKAHH 53

[Close]

BLAST of PI0005104 vs. TAIR 10
Match: AT5G15320.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01130.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 70.5 bits (171), Expect = 4.7e-13
Identity = 37/53 (69.81%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 1  MALPPGPYSGVSTLALVARASAFSVGLVYGSLKLKYLQAKANSHKKAEAKAHH 54
          M LPPG YSG S+LALVARASAF +GLVYG++KLK L+ K+ S KK EA AHH
Sbjct: 1  MTLPPGLYSGTSSLALVARASAFGLGLVYGNMKLKVLKIKSMSQKKVEATAHH 53

[Close]

BLAST of PI0005104 vs. TAIR 10
Match: AT5G15320.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01130.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.5 bits (153), Expect = 5.7e-11
Identity = 36/53 (67.92%), Postives = 41/53 (77.36%), Query Frame = 0


Query: 1  MALPPGPYSGVSTLALVARASAFSVGLVYGSLKLKYLQAKANSHKKAEAKAHH 54
          M LPPG YSG S+LALVARASAF +GLVYG++KLK    K+ S KK EA AHH
Sbjct: 1  MTLPPGLYSGTSSLALVARASAFGLGLVYGNMKLK---IKSMSQKKVEATAHH 50

[Close]

BLAST of PI0005104 vs. TAIR 10
Match: AT3G01130.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G15320.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 56.2 bits (134), Expect = 9.1e-09
Identity = 29/40 (72.50%), Postives = 34/40 (85.00%), Query Frame = 0


Query: 1  MALPPGPYSGVSTLALVARASAFSVGLVYGSLKLKYLQAK 41
          MA PPG YSG STLALVARASAF +GL+YG++KLK L+ K
Sbjct: 1  MAPPPGLYSGTSTLALVARASAFGLGLIYGNIKLKALKHK 40

The following BLAST results are available for this feature:

BLAST of PI0005104 vs.


Match Name	E-value	Identity	Description

BLAST of PI0005104 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2E7	1.9e-17	96.23	ATP synthase subunit e, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_7G007920...	[more]
A0A6J1GMM8	5.4e-17	94.34	ATP synthase subunit e, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111455...	[more]
A0A7J6FXI7	1.6e-16	92.45	ATP synthase subunit e, mitochondrial OS=Cannabis sativa OX=3483 GN=F8388_024057...	[more]
A0A7J6GZJ8	1.6e-16	92.45	ATP synthase subunit e, mitochondrial OS=Cannabis sativa OX=3483 GN=G4B88_013239...	[more]
A0A6J1C358	2.0e-16	92.45	ATP synthase subunit e, mitochondrial OS=Momordica charantia OX=3673 GN=LOC11100...	[more]

BLAST of PI0005104 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887516.1	3.8e-17	96.23	uncharacterized protein LOC120077638 [Benincasa hispida] >KGN43194.1 hypothetica...	[more]
KAG7022252.1	6.5e-17	96.23	hypothetical protein SDJN02_15983 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022952755.1	1.1e-16	94.34	uncharacterized protein LOC111455357 [Cucurbita moschata]	[more]
KAF4388402.1	3.2e-16	92.45	hypothetical protein G4B88_013239 [Cannabis sativa]	[more]
XP_030478880.1	3.2e-16	92.45	uncharacterized protein LOC115695925 [Cannabis sativa]	[more]

BLAST of PI0005104 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01130.1	7.2e-14	73.58	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G15320.1	4.7e-13	69.81	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G15320.2	5.7e-11	67.92	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G01130.2	9.1e-09	72.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008386	ATP synthase, F0 complex, subunit E, mitochondrial	PFAM	PF05680	ATP-synt_E	coord: 10..51 e-value: 2.2E-5 score: 24.7
None	No IPR available	PANTHER	PTHR36028	OSJNBB0050O03.8 PROTEIN	coord: 1..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0005104.1	PI0005104.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
molecular_function	GO:0015078	proton transmembrane transporter activity