PI0005098 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCGATTCCTTTTCAAACGCAGCGTAGACTTTTGGAGAAGAACACAGATTTTTGTTAGAATCAATGGCTGAAGAAGGGCAAGTGATTGGAATTCACAGCGTTGAGGAATTCGACGCGCAAGTACTCAGAGGAAAGGAAACGGGTAAACTGGTATGATTTTCGCTTTTAGTACTCTCCATTTTTACTTCCATTTTATACATTTTCGCATCTGATTTCGGTGGGATTTTGGATTTGATGCGTAGGTATATCGGAACATCTTTCATATCTTAACGATTTCTGTTGCATCATTATGGTTATTGTTAGAGTTTCTTCTTTTCGTTGATTTGGGAAAACTCGCGATTGATTCGTTAGGGTTTCTGATATTTATGTTTGACTTTGTCTAGTTATTAGTTTAATTTCTTCAGCTTTGACTAGTTATATTCGATTTGGAGTGTTGAAATTGCTAATAGGACGAATAATCGAATGTTTTGATTTTATCATTCTCTTCAATATTTCTCTGTTACTCGTTTCGTGTCTTTTTAGAACAAGTCTTTGGAATACTTCACCTTGTTATATATAGTTTCAGCTCTGTTGTTCCTGATGTTTCTAAAATTTTGTTTGGTAGATTGTGGTGGATTTTACTGCTTCCTGGTGTCCACCATGCCGTTTCATTGCTCCAGTATTCGCAGAGTTGGCTAAGGCGTACACCCATGTCATTTTCCTGAAAGTGGACGTTGATGAAGTTCAAGTAAAGAAACTTACGCTCTTTCCAACTCTTCCCAAACTATCATATTATGCCCTCTTGATACAGTGGAATGGAACTGTTTTGTTGATTTGATCTTTTTTTTTCTCTCTCAAACAATGGCTCCTGTTTCTTTGCAGCCAATTGCTGCGAGGTTCAAAGTTGAAGCAATGCCGACCTTTGCTTTCGTGAAAGATGGGGAGGAAGTCATCCCTCGCAGGATCGTCGGTGCTGACAAAGCGGGGCTGGGGAAGAACGTATCGGAGTTGTGCGGTCCAGTTCCATCAACTTCTATTGCATAAATGGTCAGCTTGGAAGATCATTCTGCCTCTTATTATTATGGTGTATTGTTGATGATTCTGATTTCGAGTTTTTTCATGGATTTCATGACAATATGTCTGAGATGTGTACTTGTTTAATGAATGTTTGTAGAATAATAAATGTATAATAAGATTTAATATATATATAAATTAGCTGTTTGAGCTTTTGAATTAAGTGGTGGGTTGAAAGTTTGTAGATGCTTTCTTTTGTGTTGATAGAAGAAAGAGAGAAAACATCTAAAAAGCAGGCTACTTTTGCTTTTGTTTCTCTCTTTTTCCCCTTGGCTTTAGGAAGTCTTCTGAAAGATCTAAGACTTGTAAGTTTTATGGTTGCTTGAAATTCTCATGTTTTGTGTTTGGTTGTCCATGATGTTTTATGCTTAATCAGGTTAGATAAGATCTAAAATTTTGGAGGACTTGTCGTTTTCTGGTCAAGATTTAGGGGTCATGGGATGAAAGAGGAGGAAAAGAACAAATAGGCCTCTACATTTAGGGGTCATGGGATCAGA TCGATTCCTTTTCAAACGCAGCGTAGACTTTTGGAGAAGAACACAGATTTTTGTTAGAATCAATGGCTGAAGAAGGGCAAGTGATTGGAATTCACAGCGTTGAGGAATTCGACGCGCAAGTACTCAGAGGAAAGGAAACGGGTAAACTGATTGTGGTGGATTTTACTGCTTCCTGGTGTCCACCATGCCGTTTCATTGCTCCAGTATTCGCAGAGTTGGCTAAGGCGTACACCCATGTCATTTTCCTGAAAGTGGACGTTGATGAAGTTCAACCAATTGCTGCGAGGTTCAAAGTTGAAGCAATGCCGACCTTTGCTTTCGTGAAAGATGGGGAGGAAGTCATCCCTCGCAGGATCGTCGGTGCTGACAAAGCGGGGCTGGGGAAGAACGTATCGGAGTTGTGCGGTCCAGTTCCATCAACTTCTATTGCATAAATGGTCAGCTTGGAAGATCATTCTGCCTCTTATTATTATGGTGTATTGTTGATGATTCTGATTTCGAGTTTTTTCATGGATTTCATGACAATATGTCTGAGATGTGTACTTGTTTAATGAATGTTTGTAGAATAATAAATGTATAATAAGATTTAATATATATATAAATTAGCTGTTTGAGCTTTTGAATTAAGTGGTGGGTTGAAAGTTTGTAGATGCTTTCTTTTGTGTTGATAGAAGAAAGAGAGAAAACATCTAAAAAGCAGGCTACTTTTGCTTTTGTTTCTCTCTTTTTCCCCTTGGCTTTAGGAAGTCTTCTGAAAGATCTAAGACTTGTAAGTTTTATGGTTGCTTGAAATTCTCATGTTTTGTGTTTGGTTGTCCATGATGTTTTATGCTTAATCAGGTTAGATAAGATCTAAAATTTTGGAGGACTTGTCGTTTTCTGGTCAAGATTTAGGGGTCATGGGATGAAAGAGGAGGAAAAGAACAAATAGGCCTCTACATTTAGGGGTCATGGGATCAGA ATGGCTGAAGAAGGGCAAGTGATTGGAATTCACAGCGTTGAGGAATTCGACGCGCAAGTACTCAGAGGAAAGGAAACGGGTAAACTGATTGTGGTGGATTTTACTGCTTCCTGGTGTCCACCATGCCGTTTCATTGCTCCAGTATTCGCAGAGTTGGCTAAGGCGTACACCCATGTCATTTTCCTGAAAGTGGACGTTGATGAAGTTCAACCAATTGCTGCGAGGTTCAAAGTTGAAGCAATGCCGACCTTTGCTTTCGTGAAAGATGGGGAGGAAGTCATCCCTCGCAGGATCGTCGGTGCTGACAAAGCGGGGCTGGGGAAGAACGTATCGGAGTTGTGCGGTCCAGTTCCATCAACTTCTATTGCATAA MAEEGQVIGIHSVEEFDAQVLRGKETGKLIVVDFTASWCPPCRFIAPVFAELAKAYTHVIFLKVDVDEVQPIAARFKVEAMPTFAFVKDGEEVIPRRIVGADKAGLGKNVSELCGPVPSTSIA Homology
BLAST of PI0005098 vs. ExPASy Swiss-Prot
Match: P29449 (Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 7.8e-32 Identity = 67/120 (55.83%), Postives = 87/120 (72.50%), Query Frame = 0
BLAST of PI0005098 vs. ExPASy Swiss-Prot
Match: Q0D840 (Thioredoxin H1 OS=Oryza sativa subsp. japonica OX=39947 GN=TRXH PE=1 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 5.0e-31 Identity = 64/122 (52.46%), Postives = 87/122 (71.31%), Query Frame = 0
BLAST of PI0005098 vs. ExPASy Swiss-Prot
Match: A2YIW7 (Thioredoxin H-type OS=Oryza sativa subsp. indica OX=39946 GN=TRXH PE=1 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 5.0e-31 Identity = 64/122 (52.46%), Postives = 87/122 (71.31%), Query Frame = 0
BLAST of PI0005098 vs. ExPASy Swiss-Prot
Match: Q39241 (Thioredoxin H5 OS=Arabidopsis thaliana OX=3702 GN=TRX5 PE=1 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 1.1e-30 Identity = 66/119 (55.46%), Postives = 88/119 (73.95%), Query Frame = 0
BLAST of PI0005098 vs. ExPASy Swiss-Prot
Match: Q42403 (Thioredoxin H3 OS=Arabidopsis thaliana OX=3702 GN=TRX3 PE=1 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 8.1e-29 Identity = 61/112 (54.46%), Postives = 82/112 (73.21%), Query Frame = 0
BLAST of PI0005098 vs. ExPASy TrEMBL
Match: A0A1S3BBV0 (thioredoxin H-type 1 OS=Cucumis melo OX=3656 GN=LOC103488008 PE=4 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 1.1e-57 Identity = 114/123 (92.68%), Postives = 117/123 (95.12%), Query Frame = 0
BLAST of PI0005098 vs. ExPASy TrEMBL
Match: A0A5A7VIA6 (Thioredoxin H-type 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005360 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 2.5e-57 Identity = 113/122 (92.62%), Postives = 116/122 (95.08%), Query Frame = 0
BLAST of PI0005098 vs. ExPASy TrEMBL
Match: A0A0A0LLJ2 (Thioredoxin OS=Cucumis sativus OX=3659 GN=Csa_2G362505 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 7.8e-43 Identity = 94/123 (76.42%), Postives = 100/123 (81.30%), Query Frame = 0
BLAST of PI0005098 vs. ExPASy TrEMBL
Match: A0A0A0LPD3 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G362500 PE=4 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 5.0e-42 Identity = 91/120 (75.83%), Postives = 100/120 (83.33%), Query Frame = 0
BLAST of PI0005098 vs. ExPASy TrEMBL
Match: A0A6J1CST8 (thioredoxin H-type 1-like OS=Momordica charantia OX=3673 GN=LOC111013893 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 8.9e-39 Identity = 83/123 (67.48%), Postives = 98/123 (79.67%), Query Frame = 0
BLAST of PI0005098 vs. NCBI nr
Match: XP_008444760.1 (PREDICTED: thioredoxin H-type 1 [Cucumis melo]) HSP 1 Score: 232.3 bits (591), Expect = 2.3e-57 Identity = 114/123 (92.68%), Postives = 117/123 (95.12%), Query Frame = 0
BLAST of PI0005098 vs. NCBI nr
Match: KAA0065199.1 (thioredoxin H-type 1 [Cucumis melo var. makuwa]) HSP 1 Score: 231.1 bits (588), Expect = 5.2e-57 Identity = 113/122 (92.62%), Postives = 116/122 (95.08%), Query Frame = 0
BLAST of PI0005098 vs. NCBI nr
Match: XP_004152672.3 (thioredoxin H1 [Cucumis sativus] >KAE8652116.1 hypothetical protein Csa_022569 [Cucumis sativus]) HSP 1 Score: 189.1 bits (479), Expect = 2.2e-44 Identity = 96/123 (78.05%), Postives = 101/123 (82.11%), Query Frame = 0
BLAST of PI0005098 vs. NCBI nr
Match: XP_004152675.2 (thioredoxin H1-like [Cucumis sativus] >KGN62637.1 hypothetical protein Csa_021900 [Cucumis sativus]) HSP 1 Score: 180.3 bits (456), Expect = 1.0e-41 Identity = 91/120 (75.83%), Postives = 100/120 (83.33%), Query Frame = 0
BLAST of PI0005098 vs. NCBI nr
Match: XP_022144127.1 (thioredoxin H-type 1-like [Momordica charantia]) HSP 1 Score: 169.5 bits (428), Expect = 1.8e-38 Identity = 83/123 (67.48%), Postives = 98/123 (79.67%), Query Frame = 0
BLAST of PI0005098 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 ) HSP 1 Score: 134.0 bits (336), Expect = 8.0e-32 Identity = 66/119 (55.46%), Postives = 88/119 (73.95%), Query Frame = 0
BLAST of PI0005098 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 ) HSP 1 Score: 127.9 bits (320), Expect = 5.7e-30 Identity = 61/112 (54.46%), Postives = 82/112 (73.21%), Query Frame = 0
BLAST of PI0005098 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein ) HSP 1 Score: 124.0 bits (310), Expect = 8.3e-29 Identity = 63/115 (54.78%), Postives = 82/115 (71.30%), Query Frame = 0
BLAST of PI0005098 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 ) HSP 1 Score: 117.9 bits (294), Expect = 5.9e-27 Identity = 56/111 (50.45%), Postives = 82/111 (73.87%), Query Frame = 0
BLAST of PI0005098 vs. TAIR 10
Match: AT3G17880.1 (tetraticopeptide domain-containing thioredoxin ) HSP 1 Score: 110.2 bits (274), Expect = 1.2e-24 Identity = 44/109 (40.37%), Postives = 79/109 (72.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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