PI0004981 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCATTGCCCGTGTGGCATGGGCGCTGGCCGTGTGGCATGGACGCTGGCCGTGTGGCATGGGCGCTGGCCTTGCTTGCGCGTGTAAAGCCTTAACACCTGGCCGCGTGCTTGTGGCGCGCTCGCAAGTGCCATGCGTGCTTGTGACCAAGCGTTGCGCTGCGCATCCTGTGAGCGTGCGCTTGCCACTGCACAGGGTTGGCCTTGCGCTAACCCCTTGCGCGCAGGGCCTTACCCGCATGGTCTTGCCGCATGGCCTTGTCGTTTGGTTGTGCCTTGGTCGTTCCATGTGCCTTCTTTACGCCAATATAACCTTTCTTAATACCTTGCTCGCCTTGTCTGGACCTTGTCAAGCCCTTGACGCCTGGTTCTTCTCGCCTTGCTTAACTTCTGAAATTTATTACATAAATATAACTAAACTTTCCAAGCTTATAAATTTTGATCCAAAGCTCAAAATGGAAAACTTCCTTCTACAAAGTTGCTCATATTTGTCTTAACTTTTTTAACTCAAACTTTCAGCCCAAAATTCCATGTATTGCGTTCTGTAGCTCTTACTAATTGAAGTTTGTCCAGTTTCTTCGCGAAATAGACATTTCTTCCTTTTCTCACTCAAACTAAGTTCTCCTCACCTTATTTTTATGCAACAGTCCTCCTCAATAAAATAGATACATAAAAGAAACTTTTCCAAGTAGTTTGAGGTGAAATGCACGAGTTGATTGTGAGAACTCTTAATTTGAAATTACCTATTAATAGGGAGTTTATGGAAAGATTGAAAAGACTTAATTTTGCTTCATAATCCACCTCTTAATTTCTTTAATCCACCTCCTACTTCTTAATCCACATCTTTCTTGGTTGAAAAGTGGGAGAAACTTGCTTGAGACACTTGGATTTTCCTTTTAACCGAATGCCCTCTAAGTGACACATAGTAAGACGCATTGTCAACTTCAAAACGTATAGTTCTTGCTAGGTCTTTCTCGCGTGCTAACCTCTTTAATTTAGTCTTTGTCGCACAGCTAACCTCTTAAGCAACTCGCCTAGCCCAATCCTTGCTCGCCTAGTTTTTTTAAAAACACAAAATAACCTCTAATAACTTTGTCCTACTCGCATACCTTATACTTTCAACGTAATCATCTTGTTTCTCGCCTACTAACCTCTTGAGAGGTTCTTTTATTTAACACTTTTGGCCGCCCAAAGGAAATCTTGAGAAGTTTTTCTTATCTTTTTGTCAAAATACCTAATCAATCCTTCTTTTTCCCTTTTCTTAACAACACTTAAATTTCTCTTAATTTCTTAGGATTCGGGATTTACAAGATGTTTGTCACCCATTTGATGAGAGGGGTCTTAATATTCGTGAGGGGAAGTCGTGGAATAGTGCGTGTATTTTGAAGATTCTTTGGTTGATGTTGACTAGTTTAAGGTCTTTGTGGGTGGCTTGGGTAGAGGCCTATATTCTAAAACGACGGTCATTGTGGTCTGTGAACAGTGAGATTGATCGTTTCTGGTGTCTTTGTGCTATCCTGAGGCAGCGTGATAGCCTTAGAGAGCATGTCCATATGGAGGTTGGTGATGGGAGGCGTTGTCTTGTGTGGCTTGACCCTTGGTTGTAG ATGGGCATTGCCCGTGTGGCATGGGCGCTGGCCGTGTGGCATGGACGCTGGCCGTGTGGCATGGGCGCTGGCCTTGCTTGCGCGTGTAAAGCCTTAACACCTGGCCGCGTGCTTGTGGCGCGCTCGCAAGTGCCATGCGTGCTTGTGACCAAGCGTTGCGCTGCGCATCCTGTGAGCGTGCGCTTGCCACTGCACAGGGTTGGCCTTGCGCTAACCCCTTGCGCGCAGGGCCTTACCCGCATGGTCTTGCCGCATGGCCTTGTCGTTTGGTTGTGCCTTGGTCGTTCCATGTGCCTTCTTTACGCCAATATAACCTTTCTTAATACCTTGCTCGCCTTGTCTGGACCTTGTCAAGCCCTTGACGCCTGGATTCGGGATTTACAAGATGTTTGTCACCCATTTGATGAGAGGGGTCTTAATATTCGTGAGGGGAAGTCGTGGAATAGTGCGTGTATTTTGAAGATTCTTTGGTTGATGTTGACTAGTTTAAGGTCTTTGTGGGTGGCTTGGGTAGAGGCCTATATTCTAAAACGACGGTCATTGTGGTCTGTGAACAGTGAGATTGATCGTTTCTGGTGTCTTTGTGCTATCCTGAGGCAGCGTGATAGCCTTAGAGAGCATGTCCATATGGAGGTTGGTGATGGGAGGCGTTGTCTTGTGTGGCTTGACCCTTGGTTGTAG ATGGGCATTGCCCGTGTGGCATGGGCGCTGGCCGTGTGGCATGGACGCTGGCCGTGTGGCATGGGCGCTGGCCTTGCTTGCGCGTGTAAAGCCTTAACACCTGGCCGCGTGCTTGTGGCGCGCTCGCAAGTGCCATGCGTGCTTGTGACCAAGCGTTGCGCTGCGCATCCTGTGAGCGTGCGCTTGCCACTGCACAGGGTTGGCCTTGCGCTAACCCCTTGCGCGCAGGGCCTTACCCGCATGGTCTTGCCGCATGGCCTTGTCGTTTGGTTGTGCCTTGGTCGTTCCATGTGCCTTCTTTACGCCAATATAACCTTTCTTAATACCTTGCTCGCCTTGTCTGGACCTTGTCAAGCCCTTGACGCCTGGATTCGGGATTTACAAGATGTTTGTCACCCATTTGATGAGAGGGGTCTTAATATTCGTGAGGGGAAGTCGTGGAATAGTGCGTGTATTTTGAAGATTCTTTGGTTGATGTTGACTAGTTTAAGGTCTTTGTGGGTGGCTTGGGTAGAGGCCTATATTCTAAAACGACGGTCATTGTGGTCTGTGAACAGTGAGATTGATCGTTTCTGGTGTCTTTGTGCTATCCTGAGGCAGCGTGATAGCCTTAGAGAGCATGTCCATATGGAGGTTGGTGATGGGAGGCGTTGTCTTGTGTGGCTTGACCCTTGGTTGTAG MGIARVAWALAVWHGRWPCGMGAGLACACKALTPGRVLVARSQVPCVLVTKRCAAHPVSVRLPLHRVGLALTPCAQGLTRMVLPHGLVVWLCLGRSMCLLYANITFLNTLLALSGPCQALDAWIRDLQDVCHPFDERGLNIREGKSWNSACILKILWLMLTSLRSLWVAWVEAYILKRRSLWSVNSEIDRFWCLCAILRQRDSLREHVHMEVGDGRRCLVWLDPWL Homology
BLAST of PI0004981 vs. ExPASy TrEMBL
Match: A0A5A7TWG5 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00450 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 8.4e-35 Identity = 71/105 (67.62%), Postives = 82/105 (78.10%), Query Frame = 0
BLAST of PI0004981 vs. ExPASy TrEMBL
Match: A0A5D3D5X6 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00380 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 8.4e-35 Identity = 71/105 (67.62%), Postives = 82/105 (78.10%), Query Frame = 0
BLAST of PI0004981 vs. ExPASy TrEMBL
Match: A0A5D3BDZ6 (Zf-RVT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold549G00360 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 1.3e-32 Identity = 67/105 (63.81%), Postives = 80/105 (76.19%), Query Frame = 0
BLAST of PI0004981 vs. ExPASy TrEMBL
Match: A0A5A7T440 (Zf-RVT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1480G00070 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 1.3e-32 Identity = 67/105 (63.81%), Postives = 80/105 (76.19%), Query Frame = 0
BLAST of PI0004981 vs. ExPASy TrEMBL
Match: A0A5D3DSS6 (Zf-RVT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G002890 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 3.3e-31 Identity = 65/98 (66.33%), Postives = 76/98 (77.55%), Query Frame = 0
BLAST of PI0004981 vs. NCBI nr
Match: TYK18951.1 (uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa]) HSP 1 Score: 157.1 bits (396), Expect = 1.7e-34 Identity = 71/105 (67.62%), Postives = 82/105 (78.10%), Query Frame = 0
BLAST of PI0004981 vs. NCBI nr
Match: KAA0046247.1 (uncharacterized protein E6C27_scaffold284G00450 [Cucumis melo var. makuwa]) HSP 1 Score: 157.1 bits (396), Expect = 1.7e-34 Identity = 71/105 (67.62%), Postives = 82/105 (78.10%), Query Frame = 0
BLAST of PI0004981 vs. NCBI nr
Match: TYJ96685.1 (zf-RVT domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 149.8 bits (377), Expect = 2.8e-32 Identity = 67/105 (63.81%), Postives = 80/105 (76.19%), Query Frame = 0
BLAST of PI0004981 vs. NCBI nr
Match: KAA0036886.1 (zf-RVT domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 149.8 bits (377), Expect = 2.8e-32 Identity = 67/105 (63.81%), Postives = 80/105 (76.19%), Query Frame = 0
BLAST of PI0004981 vs. NCBI nr
Match: TYK26643.1 (zf-RVT domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 145.2 bits (365), Expect = 6.8e-31 Identity = 65/98 (66.33%), Postives = 76/98 (77.55%), Query Frame = 0
BLAST of PI0004981 vs. TAIR 10
Match: AT3G25720.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 54.7 bits (130), Expect = 1.1e-07 Identity = 28/102 (27.45%), Postives = 42/102 (41.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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