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PI0004616 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATTTTTTCAGCCATTTAACGAAAGGAGAAGTAGTCTGGAGAGCTCCTTGGGTGCCCACAAGTCCCTTGACATACCGTTGTGGGAAATTGGCTTTTGTCCCATTATTGGGCCTATTGGGAGACATTGCTTACTCTCCTCTTTTGGTACTACGTTAATCATGGTCAAAACAATTCGCACTAGTTGTATATGGGCTAGAGGATTTGGAATTCTCATATGAGTCAGACGTGGCAAATGATAAAATTCATGAAGCAGTTGACGCATGGAAATTCGTAAAGAAAATGAAGAGCATGCGACATTGTGAGAGTACTACAGAACAATATGATAATTGGAGAGCATCTAGGAATGTGATTAAAGTTAGTGCTATGTTAGAATCTTAG ATGCATTTTTTCAGCCATTTAACGAAAGGAGAAGTAGTCTGGAGAGCTCCTTGGGTGCCCACAAGTCCCTTGACATACCGTTGTGGGAAATTGGCTTTTGTCCCATTATTGGGCCTATTGGGAGACATTGCTTACTCTCCTCTTTTGGTACTACTTGTATATGGGCTAGAGGATTTGGAATTCTCATATGAGTCAGACGTGGCAAATGATAAAATTCATGAAGCAGTTGACGCATGGAAATTCGTAAAGAAAATGAAGAGCATGCGACATTGTGAGAGTACTACAGAACAATATGATAATTGGAGAGCATCTAGGAATGTGATTAAAGTTAGTGCTATGTTAGAATCTTAG ATGCATTTTTTCAGCCATTTAACGAAAGGAGAAGTAGTCTGGAGAGCTCCTTGGGTGCCCACAAGTCCCTTGACATACCGTTGTGGGAAATTGGCTTTTGTCCCATTATTGGGCCTATTGGGAGACATTGCTTACTCTCCTCTTTTGGTACTACTTGTATATGGGCTAGAGGATTTGGAATTCTCATATGAGTCAGACGTGGCAAATGATAAAATTCATGAAGCAGTTGACGCATGGAAATTCGTAAAGAAAATGAAGAGCATGCGACATTGTGAGAGTACTACAGAACAATATGATAATTGGAGAGCATCTAGGAATGTGATTAAAGTTAGTGCTATGTTAGAATCTTAG MHFFSHLTKGEVVWRAPWVPTSPLTYRCGKLAFVPLLGLLGDIAYSPLLVLLVYGLEDLEFSYESDVANDKIHEAVDAWKFVKKMKSMRHCESTTEQYDNWRASRNVIKVSAMLES Homology
BLAST of PI0004616 vs. ExPASy TrEMBL
Match: A0A5D3D0S2 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G001090 PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 4.5e-40 Identity = 88/127 (69.29%), Postives = 101/127 (79.53%), Query Frame = 0
BLAST of PI0004616 vs. ExPASy TrEMBL
Match: A0A0A0KP72 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G528450 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 3.3e-27 Identity = 61/106 (57.55%), Postives = 77/106 (72.64%), Query Frame = 0
BLAST of PI0004616 vs. ExPASy TrEMBL
Match: A0A5A7SNY0 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G001110 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.5e-24 Identity = 64/98 (65.31%), Postives = 76/98 (77.55%), Query Frame = 0
BLAST of PI0004616 vs. ExPASy TrEMBL
Match: A0A5A7SUT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00100 PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 1.0e-23 Identity = 61/86 (70.93%), Postives = 68/86 (79.07%), Query Frame = 0
BLAST of PI0004616 vs. ExPASy TrEMBL
Match: A0A5A7T5S7 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 1.0e-15 Identity = 47/123 (38.21%), Postives = 70/123 (56.91%), Query Frame = 0
BLAST of PI0004616 vs. NCBI nr
Match: TYK16834.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 173.7 bits (439), Expect = 9.2e-40 Identity = 88/127 (69.29%), Postives = 101/127 (79.53%), Query Frame = 0
BLAST of PI0004616 vs. NCBI nr
Match: KGN51408.1 (hypothetical protein Csa_007736 [Cucumis sativus]) HSP 1 Score: 131.0 bits (328), Expect = 6.8e-27 Identity = 61/106 (57.55%), Postives = 77/106 (72.64%), Query Frame = 0
BLAST of PI0004616 vs. NCBI nr
Match: KAA0032013.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa]) HSP 1 Score: 122.1 bits (305), Expect = 3.2e-24 Identity = 64/98 (65.31%), Postives = 76/98 (77.55%), Query Frame = 0
BLAST of PI0004616 vs. NCBI nr
Match: KAA0033221.1 (uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]) HSP 1 Score: 119.4 bits (298), Expect = 2.1e-23 Identity = 61/86 (70.93%), Postives = 68/86 (79.07%), Query Frame = 0
BLAST of PI0004616 vs. NCBI nr
Match: KAA0036941.1 (girdin-like [Cucumis melo var. makuwa]) HSP 1 Score: 92.8 bits (229), Expect = 2.1e-15 Identity = 47/123 (38.21%), Postives = 70/123 (56.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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