PI0004600 (gene) Melon (PI 482460) v1

Overview
NamePI0004600
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr10: 16085655 .. 16086254 (-)
RNA-Seq ExpressionPI0004600
SyntenyPI0004600
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATATATTATCAACGGCCCGATTTCCCATATTAATTTTACCAGAGCCATACGTAAGCCTTGCAAAATGAAACTGAGCCATTCGATCCTCACTGTACATGTGTACGGTTGGATTACGAGATCGTAAACGGATATCGTAAAACCGCGTTGTACAGGATCATTGGCTATAGTAAAAAAATACCAAAGCTCAGTTTCTGTCGCTATCCAGTAGTCCCTCGGAAGTCCCTTTCTCTTTCTTCTCATATCACCGAGAGAAAGATCGCTTGTTCCAAACCCACCGGCAAATTTCTCCGGCCAAGGTCAGTTCATTGATAATCTGTGTTACTTGTGAAATTTATAAGGTTTCACTCTCTCATTGTTGCTTTCTTTCATTTTGATTGGTATTGAATTTCTTGTGCATTTTTTTTAATTTGTGTGCTCCTGTGTTTGTGTGTTTGTTTCGGAATTTAGTTTGATCGTGATTAACTCTGATCGGGATTCGATTTCTTGATACTCTATGAGTTTTGATTTTTGGTTGTTTGTGTGCAGATTGATTTTGGAAATCTTTCAGGTTTGCGATTTCCGTGGTTCTTTCTTATGTTTTTCATCGTTAACTTGA

mRNA sequence

ATGGTATATATTATCAACGGCCCGATTTCCCATATTAATTTTACCAGAGCCATACCCTTGCAAAATGAAACTGAGCCATTCGATCCTCACTGTACATGTGTACGGTTGGATTACGAGATCGTAAACGGATATCGTAAAACCGCGTTGTACAGGATCATTGGCTATAGTAAAAAAATACCAAAGCTCAGTTTCTGTCGCTATCCAGTAGTCCCTCGGAAGTCCCTTTCTCTTTCTTCTCATATCACCGAGAGAAAGATCGCTTGTTCCAAACCCACCGGCAAATTTCTCCGGCCAAGATTGATTTTGGAAATCTTTCAGGTTTGCGATTTCCGTGGTTCTTTCTTATGTTTTTCATCGTTAACTTGA

Coding sequence (CDS)

ATGGTATATATTATCAACGGCCCGATTTCCCATATTAATTTTACCAGAGCCATACCCTTGCAAAATGAAACTGAGCCATTCGATCCTCACTGTACATGTGTACGGTTGGATTACGAGATCGTAAACGGATATCGTAAAACCGCGTTGTACAGGATCATTGGCTATAGTAAAAAAATACCAAAGCTCAGTTTCTGTCGCTATCCAGTAGTCCCTCGGAAGTCCCTTTCTCTTTCTTCTCATATCACCGAGAGAAAGATCGCTTGTTCCAAACCCACCGGCAAATTTCTCCGGCCAAGATTGATTTTGGAAATCTTTCAGGTTTGCGATTTCCGTGGTTCTTTCTTATGTTTTTCATCGTTAACTTGA

Protein sequence

MVYIINGPISHINFTRAIPLQNETEPFDPHCTCVRLDYEIVNGYRKTALYRIIGYSKKIPKLSFCRYPVVPRKSLSLSSHITERKIACSKPTGKFLRPRLILEIFQVCDFRGSFLCFSSLT
Homology
[Close]
BLAST of PI0004600 vs. ExPASy TrEMBL
Match: A0A0A0KNV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G181170 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 8.5e-18
Identity = 60/93 (64.52%), Postives = 61/93 (65.59%), Query Frame = 0 

Query: 31  CTCVRLDYEIVNGYRKTALYRIIGYSKKIPKLSFCRYPVVPRKSLSLSSHI-TERKIACS 90
           CTCVRLDYEIVN                          +VP KSLSLSSHI TER IACS
Sbjct: 9   CTCVRLDYEIVN------------------------RNLVPPKSLSLSSHITTERNIACS 68

Query: 91  KPTGKFLRPRLILEI-FQVCDFRGSFLCFSSLT 122
           KPTGKFLR RLILEI FQVCDF GSFLCFSSLT
Sbjct: 69  KPTGKFLRRRLILEIFFQVCDFGGSFLCFSSLT 77

[Close]
BLAST of PI0004600 vs. NCBI nr
Match: KGN50534.1 (hypothetical protein Csa_000622 [Cucumis sativus])

HSP 1 Score: 99.8 bits (247), Expect = 1.8e-17
Identity = 60/93 (64.52%), Postives = 61/93 (65.59%), Query Frame = 0 

Query: 31  CTCVRLDYEIVNGYRKTALYRIIGYSKKIPKLSFCRYPVVPRKSLSLSSHI-TERKIACS 90
           CTCVRLDYEIVN                          +VP KSLSLSSHI TER IACS
Sbjct: 9   CTCVRLDYEIVN------------------------RNLVPPKSLSLSSHITTERNIACS 68

Query: 91  KPTGKFLRPRLILEI-FQVCDFRGSFLCFSSLT 122
           KPTGKFLR RLILEI FQVCDF GSFLCFSSLT
Sbjct: 69  KPTGKFLRRRLILEIFFQVCDFGGSFLCFSSLT 77

The following BLAST results are available for this feature:
BLAST of PI0004600 vs.
Match NameE-valueIdentityDescription
BLAST of PI0004600 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNV08.5e-1864.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G181170 PE=4 SV=1[more]
BLAST of PI0004600 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN50534.11.8e-1764.52hypothetical protein Csa_000622 [Cucumis sativus][more]
BLAST of PI0004600 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0004600.1PI0004600.1mRNA