PI0004555 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGGTCCTGCTTGGCAGGCGGCAAAAGAGATAGAGATATCTCCTTCGCCAAACTTATCCTTAGCATATTACTCAGAAATGACGAAATATGTGGCGGAAGCACCGAGAGGCTGCTCGCCTTAATTAAGGGTGGTGAAACATAAGATAAAAACGCGATTAGTTAGAAATTATCCCTTAACTTTGAGTATTTGGGTCCCAAAAGGTGAACAAGTATGGTGGAGGCTCCGAGAGGTTGCTCACCTTAATCCGAAGTTAACGAATAATTTCCAACGCCTTTTGCACGATCATAATTATCTCATATAATACATAGTTCCTACTTTCATCATTGCCTAGAAATTGAGTTCGCATGTTCCATATCGATCCATTCGCCATGTCCATATTCGTTGACTCCTTCGCATAAGTAGTGTAAATAGTTAGATTAAACAATTTACTTGTAAATGATATTGTATACCGCTGGAAGATTAGAACGCCTAATGAACCAACAGTAACCAGAATCCTTGCGTTCGACCCTGGCTTATCCAGGAAACCTCTTGTTCGCTTACACTTGGGCGAATAAGAGAAAAACTTGTACTTAATGGATTATCATGAGTAGTTTGCAACGCATAGGTTTAGCTCCGCACCTTTTAATGCAGGATGCTTGCCTGATCGCCTAGAATCCCAGTCGCATACTTAGAACCAATAATTTCACATACACGAAAATGAATTCAATTAATGAAGAACCAAGTTTTTGGCGCCGTTGTCGGGGATTTTGTGTTTATCTCGTTGTGTTTAATTTATGCGCTAATCTTTTTGCAGAAACTCAGTTTCAGTTGAATCGCGCGTTCAAACCCGAAGAACGTGAGAACAAGTTTATGAGTGACAGTGAACAACCATTTGAACTTGACCCTGAAATTGAGCGAACATTTCGGGGTAATCGGCGAAGAGCAAGGCAGAGACAAGTTCGTAGGATGGAAAATAACAATAGAAATGCCCCTCCGCCGCAAACTGACCCAGAACCAAACGCCGCCTATATAGCACATGACTTGGATAGGCCGATTAGATCTTATGCGGCACCCAACCTCTATAACTTCAACCCAGGAATCGCCTACCCTGTATTTGGCGAGAACGTCAGGTTTGAAATCAAACCTGTTATGCTTCAAATGATTCAGAACGCCGGACAATTCGGCGGACATCCTGGGAAAGATCCACACGAACATATAAGGAGTTTCTACTCCATTTGCGCTTCCTTCCATATGCCAGGCATCTCACCTGAAGAATTAAGATTCGCTCTCTTCCCGTTAACTCTGAGGGATGAGGCGAAGAGGTGGGCGAATGCCCTAGAAGATGGCGAGGTGGGAACATGGGATCAATTAATAGAAAAATTTATGAAGAAATTTTTCCCACCTCACGAAAATGCTAGAAGGAGGAAGGAACTTATGAGCTTCCAGCAGAAGGATAGAGAAAACCTACATGACACGTGGAGTAGGTTCAAACGGATGGTCAAAGCATGCCCCCACAATGGCATTCCTAA ATGCGGTCCTGCTTGGCAGGCGGCAAAAGAGATAGAGATATCTCCTTCGCCAAACTTATCCTTAGCATATTACTCAGAAATGACGAAATATGTGGCGGAAGCACCGAGAGGCTGCTCGCCTTAATTAAGGGTGAAACTCAGTTTCAGTTGAATCGCGCGTTCAAACCCGAAGAACGTGAGAACAAGTTTATGAGTGACAGTGAACAACCATTTGAACTTGACCCTGAAATTGAGCGAACATTTCGGGGTAATCGGCGAAGAGCAAGGCAGAGACAAGTTCGTAGGATGGAAAATAACAATAGAAATGCCCCTCCGCCGCAAACTGACCCAGAACCAAACGCCGCCTATATAGCACATGACTTGGATAGGCCGATTAGATCTTATGCGGCACCCAACCTCTATAACTTCAACCCAGGAATCGCCTACCCTGTATTTGGCGAGAACGTCAGGTTTGAAATCAAACCTGTTATGCTTCAAATGATTCAGAACGCCGGACAATTCGGCGGACATCCTGGGAAAGATCCACACGAACATATAAGGAGTTTCTACTCCATTTGCGCTTCCTTCCATATGCCAGGCATCTCACCTGAAGAATTAAGATTCGCTCTCTTCCCGTTAACTCTGAGGGATGAGGCGAAGAGGTGGGCGAATGCCCTAGAAGATGGCGAGGTTCAAACGGATGGTCAAAGCATGCCCCCACAATGGCATTCCTAA ATGCGGTCCTGCTTGGCAGGCGGCAAAAGAGATAGAGATATCTCCTTCGCCAAACTTATCCTTAGCATATTACTCAGAAATGACGAAATATGTGGCGGAAGCACCGAGAGGCTGCTCGCCTTAATTAAGGGTGAAACTCAGTTTCAGTTGAATCGCGCGTTCAAACCCGAAGAACGTGAGAACAAGTTTATGAGTGACAGTGAACAACCATTTGAACTTGACCCTGAAATTGAGCGAACATTTCGGGGTAATCGGCGAAGAGCAAGGCAGAGACAAGTTCGTAGGATGGAAAATAACAATAGAAATGCCCCTCCGCCGCAAACTGACCCAGAACCAAACGCCGCCTATATAGCACATGACTTGGATAGGCCGATTAGATCTTATGCGGCACCCAACCTCTATAACTTCAACCCAGGAATCGCCTACCCTGTATTTGGCGAGAACGTCAGGTTTGAAATCAAACCTGTTATGCTTCAAATGATTCAGAACGCCGGACAATTCGGCGGACATCCTGGGAAAGATCCACACGAACATATAAGGAGTTTCTACTCCATTTGCGCTTCCTTCCATATGCCAGGCATCTCACCTGAAGAATTAAGATTCGCTCTCTTCCCGTTAACTCTGAGGGATGAGGCGAAGAGGTGGGCGAATGCCCTAGAAGATGGCGAGGTTCAAACGGATGGTCAAAGCATGCCCCCACAATGGCATTCCTAA MRSCLAGGKRDRDISFAKLILSILLRNDEICGGSTERLLALIKGETQFQLNRAFKPEERENKFMSDSEQPFELDPEIERTFRGNRRRARQRQVRRMENNNRNAPPPQTDPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENVRFEIKPVMLQMIQNAGQFGGHPGKDPHEHIRSFYSICASFHMPGISPEELRFALFPLTLRDEAKRWANALEDGEVQTDGQSMPPQWHS Homology
BLAST of PI0004555 vs. ExPASy TrEMBL
Match: A0A5A7V2U7 (Putative disease resistance RPP13-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001950 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 2.3e-35 Identity = 76/108 (70.37%), Postives = 84/108 (77.78%), Query Frame = 0
BLAST of PI0004555 vs. ExPASy TrEMBL
Match: A0A5A7UDN8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold609G00900 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 7.7e-31 Identity = 67/97 (69.07%), Postives = 79/97 (81.44%), Query Frame = 0
BLAST of PI0004555 vs. ExPASy TrEMBL
Match: A0A5D3BVN1 (Putative disease resistance RPP13-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00390 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 5.2e-27 Identity = 64/102 (62.75%), Postives = 74/102 (72.55%), Query Frame = 0
BLAST of PI0004555 vs. ExPASy TrEMBL
Match: A0A5A7TNS8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G00350 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 8.3e-25 Identity = 65/146 (44.52%), Postives = 85/146 (58.22%), Query Frame = 0
BLAST of PI0004555 vs. ExPASy TrEMBL
Match: U5CUK7 (Uncharacterized protein OS=Amborella trichopoda OX=13333 GN=AMTR_s03373p00007640 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 2.5e-21 Identity = 56/114 (49.12%), Postives = 66/114 (57.89%), Query Frame = 0
BLAST of PI0004555 vs. NCBI nr
Match: WP_217833177.1 (retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]) HSP 1 Score: 165.6 bits (418), Expect = 5.1e-37 Identity = 87/185 (47.03%), Postives = 117/185 (63.24%), Query Frame = 0
BLAST of PI0004555 vs. NCBI nr
Match: KAA0062403.1 (putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa] >TYK26578.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 159.1 bits (401), Expect = 4.8e-35 Identity = 76/108 (70.37%), Postives = 84/108 (77.78%), Query Frame = 0
BLAST of PI0004555 vs. NCBI nr
Match: XP_038887458.1 (uncharacterized protein LOC120077591 [Benincasa hispida]) HSP 1 Score: 152.5 bits (384), Expect = 4.5e-33 Identity = 78/168 (46.43%), Postives = 112/168 (66.67%), Query Frame = 0
BLAST of PI0004555 vs. NCBI nr
Match: KAA0051815.1 (hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa] >TYK21429.1 hypothetical protein E5676_scaffold609G00900 [Cucumis melo var. makuwa]) HSP 1 Score: 144.1 bits (362), Expect = 1.6e-30 Identity = 67/97 (69.07%), Postives = 79/97 (81.44%), Query Frame = 0
BLAST of PI0004555 vs. NCBI nr
Match: TYK02149.1 (putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 131.3 bits (329), Expect = 1.1e-26 Identity = 64/102 (62.75%), Postives = 74/102 (72.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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