
PI0004476 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAAACAGAATTACGAACTGAACCACCAGAACACGGCGTCGTAATGACGAAGCAATTGAAAGAGAATCAAGAACCTTTTATCTCCGGCGGAGAGTTTCCGGCAGCGGAAGCGGAGGAGTCGATGAGGTCAATTTGTAATCCTTGTGATTTTCACTCTCCGAAGACGTACAAGGAAGTGGAGACGGATCAAGAAAGTATAGGATCGTCGGAGGAAACAGAGTCGCCGAAATCAGTAGCGAAGGTTGCGGACTGGAGGAAGAAACTAGCGTATGTTCATTATCAGATTCGAAGAATCAGAGAAGAGGATTTGCATCTTGGTGAAGACATCGGTGAAGGCTTCAATGCGAAAGAGAAGATTAATTCGATTGGTGGAGATTGGTGCGATGTTCGAGATAACAATCCTCCTCCTCATTCTTCTTTTCATAATCATCGCGTCGGTTCTCAGATGAATGTCGTGATTTTCTCGAGGCCGATCTTGCCGAGCTCGCCGCTCGGCGGGAAGAACACATTTAGGGCATTAAGTTAAAACAAGGTACGATTGTTCAATTTATAATTTCGGTTCAGTGAAATTAATTGAATCAGTGAGGAAATTGAAGGTTTAGATTCTTGTGATTGAGTTAGTTTTGGCTACTGATTTTGCAGGAGAGATGGAAAAATGAGAGGGAATAGTTAGACCTGCTCAAGGAAGTGAAAAATTGGGGGAAAATTTTGATCTATGGTTCATGGCTGCATAGAATTTAGGGCTTGTTTGAATGTGGAAGGGAATTTTTGGTGAATTTGGAACGATAAACAAAAAGAAAAAAAAAGCCGATCAAACGATTTATACTCCACTGTAAAGTCTAATCTCAATCGTAAATGAGAGAAGAAATTGCATGAATTCTGTTTATGTAAATGAATTTCCTGCCTTTATATTTA GAAAAACAGAATTACGAACTGAACCACCAGAACACGGCGTCGTAATGACGAAGCAATTGAAAGAGAATCAAGAACCTTTTATCTCCGGCGGAGAGTTTCCGGCAGCGGAAGCGGAGGAGTCGATGAGGTCAATTTGTAATCCTTGTGATTTTCACTCTCCGAAGACGTACAAGGAAGTGGAGACGGATCAAGAAAGTATAGGATCGTCGGAGGAAACAGAGTCGCCGAAATCAGTAGCGAAGGTTGCGGACTGGAGGAAGAAACTAGCGTATGTTCATTATCAGATTCGAAGAATCAGAGAAGAGGATTTGCATCTTGGTGAAGACATCGGTGAAGGCTTCAATGCGAAAGAGAAGATTAATTCGATTGGTGGAGATTGGTGCGATGTTCGAGATAACAATCCTCCTCCTCATTCTTCTTTTCATAATCATCGCGTCGGTTCTCAGATGAATGTCGTGATTTTCTCGAGGCCGATCTTGCCGAGCTCGCCGCTCGGCGGGAAGAACACATTTAGGGCATTAAGTTAAAACAAGGAGAGATGGAAAAATGAGAGGGAATAGTTAGACCTGCTCAAGGAAGTGAAAAATTGGGGGAAAATTTTGATCTATGGTTCATGGCTGCATAGAATTTAGGGCTTGTTTGAATGTGGAAGGGAATTTTTGGTGAATTTGGAACGATAAACAAAAAGAAAAAAAAAGCCGATCAAACGATTTATACTCCACTGTAAAGTCTAATCTCAATCGTAAATGAGAGAAGAAATTGCATGAATTCTGTTTATGTAAATGAATTTCCTGCCTTTATATTTA ATGACGAAGCAATTGAAAGAGAATCAAGAACCTTTTATCTCCGGCGGAGAGTTTCCGGCAGCGGAAGCGGAGGAGTCGATGAGGTCAATTTGTAATCCTTGTGATTTTCACTCTCCGAAGACGTACAAGGAAGTGGAGACGGATCAAGAAAGTATAGGATCGTCGGAGGAAACAGAGTCGCCGAAATCAGTAGCGAAGGTTGCGGACTGGAGGAAGAAACTAGCGTATGTTCATTATCAGATTCGAAGAATCAGAGAAGAGGATTTGCATCTTGGTGAAGACATCGGTGAAGGCTTCAATGCGAAAGAGAAGATTAATTCGATTGGTGGAGATTGGTGCGATGTTCGAGATAACAATCCTCCTCCTCATTCTTCTTTTCATAATCATCGCGTCGGTTCTCAGATGAATGTCGTGATTTTCTCGAGGCCGATCTTGCCGAGCTCGCCGCTCGGCGGGAAGAACACATTTAGGGCATTAAGTTAA MTKQLKENQEPFISGGEFPAAEAEESMRSICNPCDFHSPKTYKEVETDQESIGSSEETESPKSVAKVADWRKKLAYVHYQIRRIREEDLHLGEDIGEGFNAKEKINSIGGDWCDVRDNNPPPHSSFHNHRVGSQMNVVIFSRPILPSSPLGGKNTFRALS Homology
BLAST of PI0004476 vs. ExPASy TrEMBL
Match: A0A5D3DPQ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G008140 PE=4 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 1.5e-83 Identity = 153/161 (95.03%), Postives = 157/161 (97.52%), Query Frame = 0
BLAST of PI0004476 vs. ExPASy TrEMBL
Match: A0A1S3B7Y8 (uncharacterized protein LOC103487011 OS=Cucumis melo OX=3656 GN=LOC103487011 PE=4 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 1.5e-83 Identity = 153/161 (95.03%), Postives = 157/161 (97.52%), Query Frame = 0
BLAST of PI0004476 vs. ExPASy TrEMBL
Match: A0A0A0LFA4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G827220 PE=4 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 1.9e-81 Identity = 152/162 (93.83%), Postives = 155/162 (95.68%), Query Frame = 0
BLAST of PI0004476 vs. ExPASy TrEMBL
Match: A0A6J1F6X8 (uncharacterized protein LOC111441419 OS=Cucurbita moschata OX=3662 GN=LOC111441419 PE=4 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 2.0e-67 Identity = 140/163 (85.89%), Postives = 144/163 (88.34%), Query Frame = 0
BLAST of PI0004476 vs. ExPASy TrEMBL
Match: A0A5B7BJ16 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_037709 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 1.2e-22 Identity = 69/149 (46.31%), Postives = 90/149 (60.40%), Query Frame = 0
BLAST of PI0004476 vs. NCBI nr
Match: XP_008443420.1 (PREDICTED: uncharacterized protein LOC103487011 [Cucumis melo] >KAA0053752.1 uncharacterized protein E6C27_scaffold135G001310 [Cucumis melo var. makuwa] >TYK25651.1 uncharacterized protein E5676_scaffold352G008140 [Cucumis melo var. makuwa]) HSP 1 Score: 318.5 bits (815), Expect = 3.2e-83 Identity = 153/161 (95.03%), Postives = 157/161 (97.52%), Query Frame = 0
BLAST of PI0004476 vs. NCBI nr
Match: KAE8651222.1 (hypothetical protein Csa_001107 [Cucumis sativus]) HSP 1 Score: 311.6 bits (797), Expect = 3.9e-81 Identity = 152/162 (93.83%), Postives = 155/162 (95.68%), Query Frame = 0
BLAST of PI0004476 vs. NCBI nr
Match: XP_011652239.2 (uncharacterized protein LOC105435002 [Cucumis sativus]) HSP 1 Score: 311.6 bits (797), Expect = 3.9e-81 Identity = 152/162 (93.83%), Postives = 155/162 (95.68%), Query Frame = 0
BLAST of PI0004476 vs. NCBI nr
Match: XP_022934173.1 (uncharacterized protein LOC111441419 [Cucurbita moschata]) HSP 1 Score: 265.0 bits (676), Expect = 4.2e-67 Identity = 140/163 (85.89%), Postives = 144/163 (88.34%), Query Frame = 0
BLAST of PI0004476 vs. NCBI nr
Match: KAG7017711.1 (hypothetical protein SDJN02_19577, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 264.6 bits (675), Expect = 5.5e-67 Identity = 139/163 (85.28%), Postives = 144/163 (88.34%), Query Frame = 0
BLAST of PI0004476 vs. TAIR 10
Match: AT5G15190.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 7 Blast hits to 7 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 42.4 bits (98), Expect = 4.1e-04 Identity = 44/116 (37.93%), Postives = 52/116 (44.83%), Query Frame = 0
BLAST of PI0004476 vs. TAIR 10
Match: AT5G15190.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 7 Blast hits to 7 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 42.4 bits (98), Expect = 4.1e-04 Identity = 44/116 (37.93%), Postives = 52/116 (44.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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