PI0004441 (gene) Melon (PI 482460) v1

Overview


Name	PI0004441
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Flocculation protein FLO11-like
Location	chr01: 17475444 .. 17476108 (+)
RNA-Seq Expression	PI0004441
Synteny	PI0004441

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATTTGCTTTCAGTAGGACTTCTGGTTCTTCCGTTAACATGTCTGCCTCGGCTGGCCATCATGCTTCAGAAGTTTCTCCATCCTCGAGCTCTTTATGTAGATCCTAATGCTCTTATAGAAAGAGTTGTCTCTTATCCATCTGATGAGGATGATATTGCTATTGCTCAGTTGCTCCAACAGCCTCGTCGAACCCCTGCTCCTTCACCTCGTGTTGATCATTCTACTCATTTGCCCGAGATAGGTCCGAGTTTGTCCTCTGCCAATCTTGTTGTCTCTCGTACGACTATCGCTACGATCGCTCCTAATCATCCCCCTCGTCCACCGCCTTTCAAAGGTCAGAAGGTTGTCACCATTAAGGCTGGTCGTCGTAAGCTTCCTCTGAATGTTCCCTTTGCTCCCATTGATGGGATCTCCTTCCATTGTGAGGAGAATGTTCATAAATGGAAGTATGTGGTTCAACATCGAATTGCAAATGAGGTAAATATCTCCGATCAGCATTACTTCTGCTTGCCTATCATGGATCTTATTTTGTGAGCAGGTCTTATCAAAACAATGACTGTTGTGGGGGCTTTCTACCCAAATTTGATTTGCGAGTTTATTGTCAATCTACCCTCTGAGTTTGACGTTCCCATTTCTACCAAATACAGGAAGGTGTTTCTTAG

mRNA sequence

ATGTATTTGCTTTCAGTAGGACTTCTGGTTCTTCCGTTAACATGTCTGCCTCGGCTGGCCATCATGCTTCAGAAGTTTCTCCATCCTCGAGCTCTTTATGTAGATCCTAATGCTCTTATAGAAAGAGTTGTCTCTTATCCATCTGATGAGGATGATATTGCTATTGCTCAGTTGCTCCAACAGCCTCGTCGAACCCCTGCTCCTTCACCTCGTGTTGATCATTCTACTCATTTGCCCGAGATAGGTCCGAGTTTGTCCTCTGCCAATCTTGTTGTCTCTCGTACGACTATCGCTACGATCGCTCCTAATCATCCCCCTCGTCCACCGCCTTTCAAAGGTCAGAAGGTTGTCACCATTAAGGCTGGTCGTCGTAAGCTTCCTCTGAATGTTCCCTTTGCTCCCATTGATGGGATCTCCTTCCATTGTGAGGAGAATGTTCATAAATGGAAGTATGTGGTTCAACATCGAATTGCAAATGAGGAAGGTGTTTCTTAG

Coding sequence (CDS)

ATGTATTTGCTTTCAGTAGGACTTCTGGTTCTTCCGTTAACATGTCTGCCTCGGCTGGCCATCATGCTTCAGAAGTTTCTCCATCCTCGAGCTCTTTATGTAGATCCTAATGCTCTTATAGAAAGAGTTGTCTCTTATCCATCTGATGAGGATGATATTGCTATTGCTCAGTTGCTCCAACAGCCTCGTCGAACCCCTGCTCCTTCACCTCGTGTTGATCATTCTACTCATTTGCCCGAGATAGGTCCGAGTTTGTCCTCTGCCAATCTTGTTGTCTCTCGTACGACTATCGCTACGATCGCTCCTAATCATCCCCCTCGTCCACCGCCTTTCAAAGGTCAGAAGGTTGTCACCATTAAGGCTGGTCGTCGTAAGCTTCCTCTGAATGTTCCCTTTGCTCCCATTGATGGGATCTCCTTCCATTGTGAGGAGAATGTTCATAAATGGAAGTATGTGGTTCAACATCGAATTGCAAATGAGGAAGGTGTTTCTTAG

Protein sequence

MYLLSVGLLVLPLTCLPRLAIMLQKFLHPRALYVDPNALIERVVSYPSDEDDIAIAQLLQQPRRTPAPSPRVDHSTHLPEIGPSLSSANLVVSRTTIATIAPNHPPRPPPFKGQKVVTIKAGRRKLPLNVPFAPIDGISFHCEENVHKWKYVVQHRIANEEGVS

Homology

[Close]

BLAST of PI0004441 vs. ExPASy TrEMBL
Match: A0A1S3BUF5 (uncharacterized protein LOC103493408 OS=Cucumis melo OX=3656 GN=LOC103493408 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 5.9e-14
Identity = 41/82 (50.00%), Postives = 55/82 (67.07%), Query Frame = 0


Query: 82  GPSLSSANLVVSRTTIATIAPNHPPRPPPFKGQKVVTIKAGRRKLPLNVPFAPIDGISFH 141
           GPS SS ++   R   ++  P H     P +GQ+V++ K GRRK+PLNVP  PIDG+SFH
Sbjct: 48  GPSDSSISMSPPRHVDSSSRPRH----SPVRGQRVISTKVGRRKIPLNVPHMPIDGVSFH 107

Query: 142 CEENVHKWKYVVQHRIANEEGV 164
            EE  H+WKYVV+ RIA+E  +
Sbjct: 108 SEEGAHRWKYVVRCRIADEANI 125

[Close]

BLAST of PI0004441 vs. ExPASy TrEMBL
Match: A0A5D3BNR5 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00290 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 7.8e-14
Identity = 42/82 (51.22%), Postives = 55/82 (67.07%), Query Frame = 0


Query: 82  GPSLSSANLVVSRTTIATIAPNHPPRPPPFKGQKVVTIKAGRRKLPLNVPFAPIDGISFH 141
           GPS SS    +S +    +  +  PR  P +GQ+V++ K GRRK+PLNVP  PIDG+SFH
Sbjct: 104 GPSDSS----ISMSPPRHVGSSSRPRHSPVRGQRVISTKVGRRKIPLNVPHMPIDGVSFH 163

Query: 142 CEENVHKWKYVVQHRIANEEGV 164
            EE  HKWKYVV+ RIA+E  +
Sbjct: 164 SEEGAHKWKYVVRCRIADEANI 181

[Close]

BLAST of PI0004441 vs. ExPASy TrEMBL
Match: A0A5D3DM88 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001760 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.0e-13
Identity = 51/132 (38.64%), Postives = 72/132 (54.55%), Query Frame = 0


Query: 49  DEDDIAIAQLLQQPRRTPAPSPRVDHSTHLPEIGPS-------LSSANLVVSR------- 108
           D DD   A  +++     A S   ++ +  PE  PS       L  +++  S        
Sbjct: 296 DSDDEDYAPRMEEKTEAEATSTSTENQSASPEKDPSDHQSTEELGESSIPRSTEGPSEFS 355

Query: 109 ---TTIATIAPNHPPRPPPFKGQKVVTIKAGRRKLPLNVPFAPIDGISFHCEENVHKWKY 164
              +T+A +A +   R PP KGQ+VV+ KAGRRK+P NV   PIDG+SFH EE  HKWKY
Sbjct: 356 TPVSTLAHVASSSGFRRPPTKGQRVVSTKAGRRKVPPNVSSIPIDGVSFHSEEGAHKWKY 415

[Close]

BLAST of PI0004441 vs. ExPASy TrEMBL
Match: A0A5D3DJ92 (Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00100 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.3e-13
Identity = 42/82 (51.22%), Postives = 56/82 (68.29%), Query Frame = 0


Query: 82  GPSLSSANLVVSRTTIATIAPNHPPRPPPFKGQKVVTIKAGRRKLPLNVPFAPIDGISFH 141
           GPS SS  +    +T+A +A +   R PP KGQ+VV+ K GR+K+P NVP  PIDG+SFH
Sbjct: 189 GPSESSTPV----STLAHVASSSGFRRPPTKGQRVVSTKTGRQKVPPNVPSVPIDGVSFH 248

Query: 142 CEENVHKWKYVVQHRIANEEGV 164
            EE  HKWKYVV+ +I +E  +
Sbjct: 249 SEEEAHKWKYVVKRQIMDEANI 266

[Close]

BLAST of PI0004441 vs. ExPASy TrEMBL
Match: A0A1S3B3W7 (uncharacterized protein LOC103485731 OS=Cucumis melo OX=3656 GN=LOC103485731 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.3e-13
Identity = 42/82 (51.22%), Postives = 56/82 (68.29%), Query Frame = 0


Query: 82  GPSLSSANLVVSRTTIATIAPNHPPRPPPFKGQKVVTIKAGRRKLPLNVPFAPIDGISFH 141
           GPS SS  +    +T+A +A +   R PP KGQ+VV+ K GR+K+P NVP  PIDG+SFH
Sbjct: 175 GPSESSTPV----STLAHVASSSGFRRPPTKGQRVVSTKTGRQKVPPNVPSVPIDGVSFH 234

Query: 142 CEENVHKWKYVVQHRIANEEGV 164
            EE  HKWKYVV+ +I +E  +
Sbjct: 235 SEEEAHKWKYVVKRQIMDEANI 252

[Close]

BLAST of PI0004441 vs. NCBI nr
Match: XP_008452349.1 (PREDICTED: uncharacterized protein LOC103493408 [Cucumis melo])

HSP 1 Score: 87.4 bits (215), Expect = 1.2e-13
Identity = 41/82 (50.00%), Postives = 55/82 (67.07%), Query Frame = 0


Query: 82  GPSLSSANLVVSRTTIATIAPNHPPRPPPFKGQKVVTIKAGRRKLPLNVPFAPIDGISFH 141
           GPS SS ++   R   ++  P H     P +GQ+V++ K GRRK+PLNVP  PIDG+SFH
Sbjct: 48  GPSDSSISMSPPRHVDSSSRPRH----SPVRGQRVISTKVGRRKIPLNVPHMPIDGVSFH 107

Query: 142 CEENVHKWKYVVQHRIANEEGV 164
            EE  H+WKYVV+ RIA+E  +
Sbjct: 108 SEEGAHRWKYVVRCRIADEANI 125

[Close]

BLAST of PI0004441 vs. NCBI nr
Match: KAA0060525.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK00765.1 flocculation protein FLO11-like [Cucumis melo var. makuwa])

HSP 1 Score: 87.0 bits (214), Expect = 1.6e-13
Identity = 42/82 (51.22%), Postives = 55/82 (67.07%), Query Frame = 0


Query: 82  GPSLSSANLVVSRTTIATIAPNHPPRPPPFKGQKVVTIKAGRRKLPLNVPFAPIDGISFH 141
           GPS SS    +S +    +  +  PR  P +GQ+V++ K GRRK+PLNVP  PIDG+SFH
Sbjct: 104 GPSDSS----ISMSPPRHVGSSSRPRHSPVRGQRVISTKVGRRKIPLNVPHMPIDGVSFH 163

Query: 142 CEENVHKWKYVVQHRIANEEGV 164
            EE  HKWKYVV+ RIA+E  +
Sbjct: 164 SEEGAHKWKYVVRCRIADEANI 181

[Close]

BLAST of PI0004441 vs. NCBI nr
Match: KAA0041517.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK24390.1 flocculation protein FLO11-like [Cucumis melo var. makuwa])

HSP 1 Score: 86.7 bits (213), Expect = 2.1e-13
Identity = 51/132 (38.64%), Postives = 72/132 (54.55%), Query Frame = 0


Query: 49  DEDDIAIAQLLQQPRRTPAPSPRVDHSTHLPEIGPS-------LSSANLVVSR------- 108
           D DD   A  +++     A S   ++ +  PE  PS       L  +++  S        
Sbjct: 296 DSDDEDYAPRMEEKTEAEATSTSTENQSASPEKDPSDHQSTEELGESSIPRSTEGPSEFS 355

Query: 109 ---TTIATIAPNHPPRPPPFKGQKVVTIKAGRRKLPLNVPFAPIDGISFHCEENVHKWKY 164
              +T+A +A +   R PP KGQ+VV+ KAGRRK+P NV   PIDG+SFH EE  HKWKY
Sbjct: 356 TPVSTLAHVASSSGFRRPPTKGQRVVSTKAGRRKVPPNVSSIPIDGVSFHSEEGAHKWKY 415

[Close]

BLAST of PI0004441 vs. NCBI nr
Match: XP_008441650.1 (PREDICTED: uncharacterized protein LOC103485731 [Cucumis melo])

HSP 1 Score: 85.5 bits (210), Expect = 4.7e-13
Identity = 42/82 (51.22%), Postives = 56/82 (68.29%), Query Frame = 0


Query: 82  GPSLSSANLVVSRTTIATIAPNHPPRPPPFKGQKVVTIKAGRRKLPLNVPFAPIDGISFH 141
           GPS SS  +    +T+A +A +   R PP KGQ+VV+ K GR+K+P NVP  PIDG+SFH
Sbjct: 175 GPSESSTPV----STLAHVASSSGFRRPPTKGQRVVSTKTGRQKVPPNVPSVPIDGVSFH 234

Query: 142 CEENVHKWKYVVQHRIANEEGV 164
            EE  HKWKYVV+ +I +E  +
Sbjct: 235 SEEEAHKWKYVVKRQIMDEANI 252

[Close]

BLAST of PI0004441 vs. NCBI nr
Match: KAA0058927.1 (flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK23704.1 flocculation protein FLO11-like [Cucumis melo var. makuwa])

HSP 1 Score: 85.5 bits (210), Expect = 4.7e-13
Identity = 42/82 (51.22%), Postives = 56/82 (68.29%), Query Frame = 0


Query: 82  GPSLSSANLVVSRTTIATIAPNHPPRPPPFKGQKVVTIKAGRRKLPLNVPFAPIDGISFH 141
           GPS SS  +    +T+A +A +   R PP KGQ+VV+ K GR+K+P NVP  PIDG+SFH
Sbjct: 189 GPSESSTPV----STLAHVASSSGFRRPPTKGQRVVSTKTGRQKVPPNVPSVPIDGVSFH 248

Query: 142 CEENVHKWKYVVQHRIANEEGV 164
            EE  HKWKYVV+ +I +E  +
Sbjct: 249 SEEEAHKWKYVVKRQIMDEANI 266

The following BLAST results are available for this feature:

BLAST of PI0004441 vs.


Match Name	E-value	Identity	Description

BLAST of PI0004441 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BUF5	5.9e-14	50.00	uncharacterized protein LOC103493408 OS=Cucumis melo OX=3656 GN=LOC103493408 PE=...	[more]
A0A5D3BNR5	7.8e-14	51.22	Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3DM88	1.0e-13	38.64	Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5D3DJ92	2.3e-13	51.22	Flocculation protein FLO11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3B3W7	2.3e-13	51.22	uncharacterized protein LOC103485731 OS=Cucumis melo OX=3656 GN=LOC103485731 PE=...	[more]

BLAST of PI0004441 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452349.1	1.2e-13	50.00	PREDICTED: uncharacterized protein LOC103493408 [Cucumis melo]	[more]
KAA0060525.1	1.6e-13	51.22	flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK00765.1 flocculat...	[more]
KAA0041517.1	2.1e-13	38.64	flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK24390.1 flocculat...	[more]
XP_008441650.1	4.7e-13	51.22	PREDICTED: uncharacterized protein LOC103485731 [Cucumis melo]	[more]
KAA0058927.1	4.7e-13	51.22	flocculation protein FLO11-like [Cucumis melo var. makuwa] >TYK23704.1 flocculat...	[more]

BLAST of PI0004441 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0004441.1	PI0004441.1	mRNA