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PI0004407 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGCAAGTAAGCAAGAAGAATGGTGTAGTTGATGATGATCAAGAAGACAAAATGAAAAAACAAATAGAAAGGGGACAGGTGCTCCAAAACCCAAAGCATATGGTGAGGTGTAAGAAAAACAGAAAATTTAAGTGTCCACCTTGCAATTCTTGGAGGAACTTCCCTTCCCAGAAGCTAAAAACCCCCTATCTTGGCCTTTCCCTTTTTACCCATAAAAATAATTAGCAAAATCAACAGACAACAATGGAAATGGAGAAGAAGAAGAAGAAGGTGAAATTGGTATTATGGATGCTGCTGTTGCTGCTGCTTATTCTTGTTGGTATTGTGAAGGCTAATGATGAAGCAACAAATAACATATATTCAGAAACATCAACACCAAATCCTCCAAACTCCTATTGGGAAGAAGTTCGAAAGATGGTGAATAAAGCCTACACCTATCTGTTTCCTCCAAAAATAGAGTAAGTAATCTCCATTAATTTGGTTCCTGAACTAATTAATTAGTTACTAATTAAGGGGTTTGGGTTTTAGTTTCCGACCAGGAAAGGCTGTGGAAGATGATTCTGGGGTGAGTGTGAAGAATGGGAATGTGAAGGAAGCTGTTACAAAGAGCTTCGAAAAGACGAAAGAAATGGTGGAGGATTCCGCTAGAGCTGCCGCTCAAACGCTTCGAAAACCACCACCACATTCAGAACTCTAGGAATACTAATTCCAACCCTTCAGGTTTCTTTACACTTCCTGTTTCTTCTATAATTTTTATTATCTTCTTGTTATTTGTTTGTTTTTGGTGAATGGTGAATTATATGGTCTACAAATTTTGGATGTTTAAGGATGGGAATATGGGACTGGGCCACTACTCCAATGAATTGGGCTCCCATTTTAACCCCATACATCATTCTCTCTCGATATATTGTAGTGTTTTTATTTCCCTTTAAGATTCCCCATGGTCTTAAATAAATAGGGTTTAATTACACCTTTAA AGCAAGTAAGCAAGAAGAATGGTGTAGTTGATGATGATCAAGAAGACAAAATGAAAAAACAAATAGAAAGGGGACAGGTGCTCCAAAACCCAAAGCATATGGTGAGGTGTAAGAAAAACAGAAAATTTAAGTGTCCACCTTGCAATTCTTGGAGGAACTTCCCTTCCCAGAAGCTAAAAACCCCCTATCTTGGCCTTTCCCTTTTTACCCATAAAAATAATTAGCAAAATCAACAGACAACAATGGAAATGGAGAAGAAGAAGAAGAAGGTGAAATTGGTATTATGGATGCTGCTGTTGCTGCTGCTTATTCTTGTTGGTATTGTGAAGGCTAATGATGAAGCAACAAATAACATATATTCAGAAACATCAACACCAAATCCTCCAAACTCCTATTGGGAAGAAGTTCGAAAGATGGTGAATAAAGCCTACACCTATCTGTTTCCTCCAAAAATAGATTTCCGACCAGGAAAGGCTGTGGAAGATGATTCTGGGGTGAGTGTGAAGAATGGGAATGTGAAGGAAGCTGTTACAAAGAGCTTCGAAAAGACGAAAGAAATGGTGGAGGATTCCGCTAGAGCTGCCGCTCAAACGCTTCGAAAACCACCACCACATTCAGAACTCTAGGAATACTAATTCCAACCCTTCAGGTTTCTTTACACTTCCTGTTTCTTCTATAATTTTTATTATCTTCTTGTTATTTGTTTGTTTTTGGTGAATGGTGAATTATATGGTCTACAAATTTTGGATGTTTAAGGATGGGAATATGGGACTGGGCCACTACTCCAATGAATTGGGCTCCCATTTTAACCCCATACATCATTCTCTCTCGATATATTGTAGTGTTTTTATTTCCCTTTAAGATTCCCCATGGTCTTAAATAAATAGGGTTTAATTACACCTTTAA ATGGAAATGGAGAAGAAGAAGAAGAAGGTGAAATTGGTATTATGGATGCTGCTGTTGCTGCTGCTTATTCTTGTTGGTATTGTGAAGGCTAATGATGAAGCAACAAATAACATATATTCAGAAACATCAACACCAAATCCTCCAAACTCCTATTGGGAAGAAGTTCGAAAGATGGTGAATAAAGCCTACACCTATCTGTTTCCTCCAAAAATAGATTTCCGACCAGGAAAGGCTGTGGAAGATGATTCTGGGGTGAGTGTGAAGAATGGGAATGTGAAGGAAGCTGTTACAAAGAGCTTCGAAAAGACGAAAGAAATGGTGGAGGATTCCGCTAGAGCTGCCGCTCAAACGCTTCGAAAACCACCACCACATTCAGAACTCTAG MEMEKKKKKVKLVLWMLLLLLLILVGIVKANDEATNNIYSETSTPNPPNSYWEEVRKMVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGNVKEAVTKSFEKTKEMVEDSARAAAQTLRKPPPHSEL Homology
BLAST of PI0004407 vs. ExPASy TrEMBL
Match: A0A0A0L904 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G642710 PE=4 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 5.9e-54 Identity = 116/127 (91.34%), Postives = 122/127 (96.06%), Query Frame = 0
BLAST of PI0004407 vs. ExPASy TrEMBL
Match: A0A5A7VE77 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G00220 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 5.6e-52 Identity = 111/127 (87.40%), Postives = 122/127 (96.06%), Query Frame = 0
BLAST of PI0004407 vs. ExPASy TrEMBL
Match: A0A1S3CDE0 (uncharacterized protein LOC103499155 OS=Cucumis melo OX=3656 GN=LOC103499155 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 5.6e-52 Identity = 111/127 (87.40%), Postives = 122/127 (96.06%), Query Frame = 0
BLAST of PI0004407 vs. ExPASy TrEMBL
Match: A0A6J1G9K3 (uncharacterized protein LOC111452199 OS=Cucurbita moschata OX=3662 GN=LOC111452199 PE=4 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 1.3e-24 Identity = 72/116 (62.07%), Postives = 86/116 (74.14%), Query Frame = 0
BLAST of PI0004407 vs. ExPASy TrEMBL
Match: A0A6J1D2A4 (uncharacterized protein LOC111016933 OS=Momordica charantia OX=3673 GN=LOC111016933 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.4e-10 Identity = 41/82 (50.00%), Postives = 57/82 (69.51%), Query Frame = 0
BLAST of PI0004407 vs. NCBI nr
Match: XP_031737573.1 (uncharacterized protein LOC101222094 [Cucumis sativus] >KGN58430.1 hypothetical protein Csa_000839 [Cucumis sativus]) HSP 1 Score: 219.9 bits (559), Expect = 1.2e-53 Identity = 116/127 (91.34%), Postives = 122/127 (96.06%), Query Frame = 0
BLAST of PI0004407 vs. NCBI nr
Match: XP_008460283.1 (PREDICTED: uncharacterized protein LOC103499155 [Cucumis melo] >KAA0065584.1 putative transmembrane protein [Cucumis melo var. makuwa] >TYK07150.1 putative transmembrane protein [Cucumis melo var. makuwa]) HSP 1 Score: 213.4 bits (542), Expect = 1.1e-51 Identity = 111/127 (87.40%), Postives = 122/127 (96.06%), Query Frame = 0
BLAST of PI0004407 vs. NCBI nr
Match: KAG6571254.1 (hypothetical protein SDJN03_30169, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 124.0 bits (310), Expect = 9.2e-25 Identity = 76/134 (56.72%), Postives = 93/134 (69.40%), Query Frame = 0
BLAST of PI0004407 vs. NCBI nr
Match: XP_022948557.1 (uncharacterized protein LOC111452199 [Cucurbita moschata]) HSP 1 Score: 122.5 bits (306), Expect = 2.7e-24 Identity = 72/116 (62.07%), Postives = 86/116 (74.14%), Query Frame = 0
BLAST of PI0004407 vs. NCBI nr
Match: KAG6571257.1 (hypothetical protein SDJN03_30172, partial [Cucurbita argyrosperma subsp. sororia] >KAG6571261.1 hypothetical protein SDJN03_30176, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 121.7 bits (304), Expect = 4.5e-24 Identity = 75/134 (55.97%), Postives = 93/134 (69.40%), Query Frame = 0
BLAST of PI0004407 vs. TAIR 10
Match: AT1G16850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, leaf whorl, male gametophyte, flower, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64820.1); Has 24 Blast hits to 24 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.5 bits (101), Expect = 1.5e-04 Identity = 34/115 (29.57%), Postives = 61/115 (53.04%), Query Frame = 0
BLAST of PI0004407 vs. TAIR 10
Match: AT5G64820.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 43.5 bits (101), Expect = 1.5e-04 Identity = 32/114 (28.07%), Postives = 56/114 (49.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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