Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACTTAACTCAACCCGATAGCGATGATGGGGAGAACGAGAAAGAAGCTCTTCCTTTGACAAAGAGACTCGACTTAAAGATTGTAAATGATACAGATAATGTCGCCAAGCCTAGTATCGAGAGAGAGATTAGGGAAACATCACCTTCTCCTGACCCATTTCACCACAATAACTTGGATTGTGAGGAAGCTGCTACTCCACTTCCATCTTCTCATGTTAATGAGATTATTCATCCTCAGTCTAAAAGACCACAAAATAGACCATTAGACTCACCTGCTGCTCTTACTAGATCAGCAGTTCGTAGATTACCCATTGAAGAGGTTCAATCTCAGTCGGAGGAAAATGTGGTCGGAGTTGATACAAACATGCCGGAACCCAAAAAGACAAGAGGTCGAACGAAGATGCAAACAATAGCGGTGGAGCCAGAAATGAAACTAAATATAAGGTACAACGAATATGGACAGCCTATTGGAGAAACATCAGTTGGGTTGTCCTCATTTTTGGGTTCACTTGTCAGAGAAGTGGTGCCAGTAAATGTTGAAACGTGGAAGAAACTTTCAACGAGACAGAAAGAAATATTGTGGCATTTTATTCAAGTATGTAATGTATAA
mRNA sequence
ATGGACTTAACTCAACCCGATAGCGATGATGGGGAGAACGAGAAAGAAGCTCTTCCTTTGACAAAGAGACTCGACTTAAAGATTGTAAATGATACAGATAATGTCGCCAAGCCTAGTATCGAGAGAGAGATTAGGGAAACATCACCTTCTCCTGACCCATTTCACCACAATAACTTGGATTGTGAGGAAGCTGCTACTCCACTTCCATCTTCTCATGTTAATGAGATTATTCATCCTCAGTCTAAAAGACCACAAAATAGACCATTAGACTCACCTGCTGCTCTTACTAGATCAGCAGTTCGTAGATTACCCATTGAAGAGGTTCAATCTCAGTCGGAGGAAAATGTGGTCGGAGTTGATACAAACATGCCGGAACCCAAAAAGACAAGAGGTCGAACGAAGATGCAAACAATAGCGGTGGAGCCAGAAATGAAACTAAATATAAGGTACAACGAATATGGACAGCCTATTGGAGAAACATCAGTTGGGTTGTCCTCATTTTTGGGTTCACTTGTCAGAGAAGTGGTGCCAGTAAATGTTGAAACGTGGAAGAAACTTTCAACGAGACAGAAAGAAATATTGTGGCATTTTATTCAAGTATGTAATGTATAA
Coding sequence (CDS)
ATGGACTTAACTCAACCCGATAGCGATGATGGGGAGAACGAGAAAGAAGCTCTTCCTTTGACAAAGAGACTCGACTTAAAGATTGTAAATGATACAGATAATGTCGCCAAGCCTAGTATCGAGAGAGAGATTAGGGAAACATCACCTTCTCCTGACCCATTTCACCACAATAACTTGGATTGTGAGGAAGCTGCTACTCCACTTCCATCTTCTCATGTTAATGAGATTATTCATCCTCAGTCTAAAAGACCACAAAATAGACCATTAGACTCACCTGCTGCTCTTACTAGATCAGCAGTTCGTAGATTACCCATTGAAGAGGTTCAATCTCAGTCGGAGGAAAATGTGGTCGGAGTTGATACAAACATGCCGGAACCCAAAAAGACAAGAGGTCGAACGAAGATGCAAACAATAGCGGTGGAGCCAGAAATGAAACTAAATATAAGGTACAACGAATATGGACAGCCTATTGGAGAAACATCAGTTGGGTTGTCCTCATTTTTGGGTTCACTTGTCAGAGAAGTGGTGCCAGTAAATGTTGAAACGTGGAAGAAACTTTCAACGAGACAGAAAGAAATATTGTGGCATTTTATTCAAGTATGTAATGTATAA
Protein sequence
MDLTQPDSDDGENEKEALPLTKRLDLKIVNDTDNVAKPSIEREIRETSPSPDPFHHNNLDCEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAALTRSAVRRLPIEEVQSQSEENVVGVDTNMPEPKKTRGRTKMQTIAVEPEMKLNIRYNEYGQPIGETSVGLSSFLGSLVREVVPVNVETWKKLSTRQKEILWHFIQVCNV
Homology
BLAST of PI0004384 vs. ExPASy TrEMBL
Match:
A0A5A7TIU1 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G002550 PE=4 SV=1)
HSP 1 Score: 251.9 bits (642), Expect = 2.3e-63
Identity = 140/203 (68.97%), Postives = 150/203 (73.89%), Query Frame = 0
Query: 1 MDLTQPDSDDGENEKEALPLTKRLDLKIVNDTDNVAKPSIEREIRETSPSPDPFHHNNLD 60
MDLTQP +DD ENE EAL L E+EIRETSP PDP
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60
Query: 61 CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAALTRSAVRRLPIEEVQSQSEEN----V 120
EEA TPLPSSHVN IHPQSKRP NRPLDSPA TRSAVR+LP+EEV+SQ EEN
Sbjct: 61 -EEATTPLPSSHVNATIHPQSKRPPNRPLDSPAGCTRSAVRKLPVEEVESQLEENENVDC 120
Query: 121 VGVDTNMPEPKKTRGRTKMQTIAVEPEMKLNIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
V T P PKKTRGRTKMQTIA+EPEMKL+IRYN YGQPIGETSVGLSSFLG+LVREVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVV 178
Query: 181 PVNVETWKKLSTRQKEILWHFIQ 200
PVN+ETWKK+STRQKEILWH IQ
Sbjct: 181 PVNIETWKKISTRQKEILWHSIQ 178
BLAST of PI0004384 vs. ExPASy TrEMBL
Match:
A0A5A7UBP2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G00210 PE=4 SV=1)
HSP 1 Score: 250.8 bits (639), Expect = 5.0e-63
Identity = 140/203 (68.97%), Postives = 150/203 (73.89%), Query Frame = 0
Query: 1 MDLTQPDSDDGENEKEALPLTKRLDLKIVNDTDNVAKPSIEREIRETSPSPDPFHHNNLD 60
MDLTQP +DD ENE EAL L E+EIRETSP PDP
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60
Query: 61 CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAALTRSAVRRLPIEEVQSQSEEN----V 120
EEA TPLPSSHVN IHPQS+RP NRPLDSPA TRSAVR+LP+EEV+SQ EEN
Sbjct: 61 -EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDC 120
Query: 121 VGVDTNMPEPKKTRGRTKMQTIAVEPEMKLNIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
V T P PKKTRGRTKMQTIA+EPEMKL+IRYN YGQPIGETSVGLSSFLG+LVREVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVV 178
Query: 181 PVNVETWKKLSTRQKEILWHFIQ 200
PVNVETWKK+STRQKEILWH IQ
Sbjct: 181 PVNVETWKKISTRQKEILWHSIQ 178
BLAST of PI0004384 vs. ExPASy TrEMBL
Match:
A0A5A7SRN7 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00120 PE=4 SV=1)
HSP 1 Score: 250.8 bits (639), Expect = 5.0e-63
Identity = 140/203 (68.97%), Postives = 150/203 (73.89%), Query Frame = 0
Query: 1 MDLTQPDSDDGENEKEALPLTKRLDLKIVNDTDNVAKPSIEREIRETSPSPDPFHHNNLD 60
MDLTQP +DD ENE EAL L E+EIRETSP PDP
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60
Query: 61 CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAALTRSAVRRLPIEEVQSQSEEN----V 120
EEA TPLPSSHVN IHPQS+RP NRPLDSPA TRSAVR+LP+EEV+SQ EEN
Sbjct: 61 -EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDC 120
Query: 121 VGVDTNMPEPKKTRGRTKMQTIAVEPEMKLNIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
V T P PKKTRGRTKMQTIA+EPEMKL+IRYN YGQPIGETSVGLSSFLG+LVREVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVV 178
Query: 181 PVNVETWKKLSTRQKEILWHFIQ 200
PVNVETWKK+STRQKEILWH IQ
Sbjct: 181 PVNVETWKKISTRQKEILWHSIQ 178
BLAST of PI0004384 vs. ExPASy TrEMBL
Match:
A0A5A7TLJ2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003690 PE=4 SV=1)
HSP 1 Score: 245.7 bits (626), Expect = 1.6e-61
Identity = 137/203 (67.49%), Postives = 148/203 (72.91%), Query Frame = 0
Query: 1 MDLTQPDSDDGENEKEALPLTKRLDLKIVNDTDNVAKPSIEREIRETSPSPDPFHHNNLD 60
MDLTQP +DD ENE EAL L E+EIRETSP PDP
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60
Query: 61 CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAALTRSAVRRLPIEEVQSQSEEN----V 120
EEA TPLPSSHVN IHPQS++P NRPLDSPA TR VR+LP+EEV+SQ EEN
Sbjct: 61 -EEATTPLPSSHVNATIHPQSRKPPNRPLDSPAGRTRLVVRKLPVEEVESQLEENENVDC 120
Query: 121 VGVDTNMPEPKKTRGRTKMQTIAVEPEMKLNIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
V T P PKKTRGRTKMQTIA+EPEMKL+IRYN YGQPIGETSVGLSSFLG+LVREVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVV 178
Query: 181 PVNVETWKKLSTRQKEILWHFIQ 200
PVNVETWKK+STRQKEILWH IQ
Sbjct: 181 PVNVETWKKISTRQKEILWHSIQ 178
BLAST of PI0004384 vs. ExPASy TrEMBL
Match:
A0A5A7UNU1 (Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold226G00350 PE=4 SV=1)
HSP 1 Score: 243.8 bits (621), Expect = 6.1e-61
Identity = 137/204 (67.16%), Postives = 148/204 (72.55%), Query Frame = 0
Query: 1 MDLTQPDSDDGENEKEALPLTKRLDLKIVNDTDNVAKPSIEREIRETSPSPDPFHHNNLD 60
MDLTQP +DD ENE EAL L E+EIRETSP PDP
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPL------ 60
Query: 61 CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAALTRSAVRRLPIEEVQSQSEEN----V 120
EEA TPLPSSHVN IHPQS+RP NRPLDSPA TRSAVR+L +EEV+SQ EEN
Sbjct: 61 LEEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLLVEEVESQLEENENVDC 120
Query: 121 VGVDTNMPEPKKTRGRTKMQTIAVEPEMKLNIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
V T P PKKTRGRTKMQTIA+EPEMKL+IRYN YGQPIGETSVGLSSFLG+L REVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLFREVV 179
Query: 181 PVNVETWKKLSTRQKEILWHFIQV 201
PVNV TWKK+STRQKEILWH IQ+
Sbjct: 181 PVNVATWKKISTRQKEILWHSIQM 179
BLAST of PI0004384 vs. NCBI nr
Match:
KAA0041269.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 251.9 bits (642), Expect = 4.7e-63
Identity = 140/203 (68.97%), Postives = 150/203 (73.89%), Query Frame = 0
Query: 1 MDLTQPDSDDGENEKEALPLTKRLDLKIVNDTDNVAKPSIEREIRETSPSPDPFHHNNLD 60
MDLTQP +DD ENE EAL L E+EIRETSP PDP
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60
Query: 61 CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAALTRSAVRRLPIEEVQSQSEEN----V 120
EEA TPLPSSHVN IHPQSKRP NRPLDSPA TRSAVR+LP+EEV+SQ EEN
Sbjct: 61 -EEATTPLPSSHVNATIHPQSKRPPNRPLDSPAGCTRSAVRKLPVEEVESQLEENENVDC 120
Query: 121 VGVDTNMPEPKKTRGRTKMQTIAVEPEMKLNIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
V T P PKKTRGRTKMQTIA+EPEMKL+IRYN YGQPIGETSVGLSSFLG+LVREVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVV 178
Query: 181 PVNVETWKKLSTRQKEILWHFIQ 200
PVN+ETWKK+STRQKEILWH IQ
Sbjct: 181 PVNIETWKKISTRQKEILWHSIQ 178
BLAST of PI0004384 vs. NCBI nr
Match:
KAA0032201.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 250.8 bits (639), Expect = 1.0e-62
Identity = 140/203 (68.97%), Postives = 150/203 (73.89%), Query Frame = 0
Query: 1 MDLTQPDSDDGENEKEALPLTKRLDLKIVNDTDNVAKPSIEREIRETSPSPDPFHHNNLD 60
MDLTQP +DD ENE EAL L E+EIRETSP PDP
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60
Query: 61 CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAALTRSAVRRLPIEEVQSQSEEN----V 120
EEA TPLPSSHVN IHPQS+RP NRPLDSPA TRSAVR+LP+EEV+SQ EEN
Sbjct: 61 -EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDC 120
Query: 121 VGVDTNMPEPKKTRGRTKMQTIAVEPEMKLNIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
V T P PKKTRGRTKMQTIA+EPEMKL+IRYN YGQPIGETSVGLSSFLG+LVREVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVV 178
Query: 181 PVNVETWKKLSTRQKEILWHFIQ 200
PVNVETWKK+STRQKEILWH IQ
Sbjct: 181 PVNVETWKKISTRQKEILWHSIQ 178
BLAST of PI0004384 vs. NCBI nr
Match:
KAA0051001.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 250.8 bits (639), Expect = 1.0e-62
Identity = 140/203 (68.97%), Postives = 150/203 (73.89%), Query Frame = 0
Query: 1 MDLTQPDSDDGENEKEALPLTKRLDLKIVNDTDNVAKPSIEREIRETSPSPDPFHHNNLD 60
MDLTQP +DD ENE EAL L E+EIRETSP PDP
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60
Query: 61 CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAALTRSAVRRLPIEEVQSQSEEN----V 120
EEA TPLPSSHVN IHPQS+RP NRPLDSPA TRSAVR+LP+EEV+SQ EEN
Sbjct: 61 -EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDC 120
Query: 121 VGVDTNMPEPKKTRGRTKMQTIAVEPEMKLNIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
V T P PKKTRGRTKMQTIA+EPEMKL+IRYN YGQPIGETSVGLSSFLG+LVREVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVV 178
Query: 181 PVNVETWKKLSTRQKEILWHFIQ 200
PVNVETWKK+STRQKEILWH IQ
Sbjct: 181 PVNVETWKKISTRQKEILWHSIQ 178
BLAST of PI0004384 vs. NCBI nr
Match:
KAA0042856.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 245.7 bits (626), Expect = 3.3e-61
Identity = 137/203 (67.49%), Postives = 148/203 (72.91%), Query Frame = 0
Query: 1 MDLTQPDSDDGENEKEALPLTKRLDLKIVNDTDNVAKPSIEREIRETSPSPDPFHHNNLD 60
MDLTQP +DD ENE EAL L E+EIRETSP PDP
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60
Query: 61 CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAALTRSAVRRLPIEEVQSQSEEN----V 120
EEA TPLPSSHVN IHPQS++P NRPLDSPA TR VR+LP+EEV+SQ EEN
Sbjct: 61 -EEATTPLPSSHVNATIHPQSRKPPNRPLDSPAGRTRLVVRKLPVEEVESQLEENENVDC 120
Query: 121 VGVDTNMPEPKKTRGRTKMQTIAVEPEMKLNIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
V T P PKKTRGRTKMQTIA+EPEMKL+IRYN YGQPIGETSVGLSSFLG+LVREVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVV 178
Query: 181 PVNVETWKKLSTRQKEILWHFIQ 200
PVNVETWKK+STRQKEILWH IQ
Sbjct: 181 PVNVETWKKISTRQKEILWHSIQ 178
BLAST of PI0004384 vs. NCBI nr
Match:
KAA0056267.1 (uncharacterized protein E6C27_scaffold226G00350 [Cucumis melo var. makuwa])
HSP 1 Score: 243.8 bits (621), Expect = 1.3e-60
Identity = 137/204 (67.16%), Postives = 148/204 (72.55%), Query Frame = 0
Query: 1 MDLTQPDSDDGENEKEALPLTKRLDLKIVNDTDNVAKPSIEREIRETSPSPDPFHHNNLD 60
MDLTQP +DD ENE EAL L E+EIRETSP PDP
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPL------ 60
Query: 61 CEEAATPLPSSHVNEIIHPQSKRPQNRPLDSPAALTRSAVRRLPIEEVQSQSEEN----V 120
EEA TPLPSSHVN IHPQS+RP NRPLDSPA TRSAVR+L +EEV+SQ EEN
Sbjct: 61 LEEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLLVEEVESQLEENENVDC 120
Query: 121 VGVDTNMPEPKKTRGRTKMQTIAVEPEMKLNIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
V T P PKKTRGRTKMQTIA+EPEMKL+IRYN YGQPIGETSVGLSSFLG+L REVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLFREVV 179
Query: 181 PVNVETWKKLSTRQKEILWHFIQV 201
PVNV TWKK+STRQKEILWH IQ+
Sbjct: 181 PVNVATWKKISTRQKEILWHSIQM 179
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7TIU1 | 2.3e-63 | 68.97 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00... | [more] |
| A0A5A7UBP2 | 5.0e-63 | 68.97 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G0... | [more] |
| A0A5A7SRN7 | 5.0e-63 | 68.97 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00... | [more] |
| A0A5A7TLJ2 | 1.6e-61 | 67.49 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003... | [more] |
| A0A5A7UNU1 | 6.1e-61 | 67.16 | Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
