PI0004107 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTCAATGCAAGTCACAATCACAATAATTTCATATCCAATCATGCCTTGTTTATCCGATTCTATCCGAAATTGGGGATTTTGATTCGATTCCCATTTTCCATTTTCCATTTTGATTTCGGCATGTTTCTGTGTTTTGATGTTTGTAATCTGATTTTTCGCCGAATATGGTGACCCGAGAGAGCTGGTTTTCTGTTTGGATCGATCGACTTCTCTCTTGTTTAGGGTGAGTACTCTGATTCTTTGTTCATCACCTCATTTCTGTTCGTCTTAAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTATTGTTTGATGAATTTAGAATTGTTTTTATGCGAAAACCTAATTGAAACGTGTAGAGCAATTCAAAACGCTGTTCTGGATTGGGGGAATTTTAGATGCAGTTGTATGGATCCATGATAGATGATTGTCATTGTTATTTGAGTGTTTCTAATTTGGAGTGGTGTTTTAACTGATGATATGAAAGATGATATTTCCTTCATGGAGTGATGAGTTTTTGTTCTGCAAATACTTTCAGCTTCTCTTATGAAGAGGTTTGAGTGATTCTAATTTGGAGCTTCTTTTTGAATTGGGAGATTGCATTTCTAGACAGAATTTCTTAATCTGCAATTAAGGAACCTTGGAAAGTGAAAGAAATATCAGTTGGTTCTTAGTAAGTGTTCAGGTCCGAAAAAATAAGGAGAAAATGGTAGCTTCATTTTTTTTCCATGAATTGAACCTCAACGCTGATGGATTAGTGTCAGAATGACATATATAAGTGAAGTTTTGGTATATTATAGGAAACAGAATCCATAAACATAACAGGTGTTTGCTTAGTCCCATTGACGATGGACTCTAGATTATCTCTAAGTAAATGGCAGGAGCATCGAAGTTCTTAGATTAAATGGATTAGTAGTTGTTTGCATCATTGAAGTCTATTCTTGCTCCCAGAAGTAAGCTTTTTAGAACTGGGCTGTACTGGACTTTGGAATGCTAGTTTTCGGATGGTCAAAAGAGTTGCAAGTGGTGAGAATATGTTCAATGCATATATCCTTGGTTCATTAACTGATTGATCTTCTATCTCGGTTATAATTTTTCATGTTTCATTGTCAGTGTTTAGGTTCATGACATTGAGGGTTCGTTTTCCTAAGGTATATTCAATGATCTGCATACATGCATAGTTTATTTCAAACTTCATTGAGGGCCCAGAACTTAACCATGTTAGTGAATTCTTCTCTTGATTTAAAGTATGACAAGAGACAATTTGAAATGGCAGTACTGTGATGTTCATGCATTTGCATTTATCAATACTTAAACTGTACTTGTCTGTTTTGGAGTTATTTTATCCATAGTTTTCAACATGCTGCTAACAGAGGAAATGTTTGTTTCGGTAGGAGCATTAAACCTGCACCTGCCATCTCAGGGAATAACCTGAATTCTAGGATGCCAAGCATGTCAGAAGATTTTTGGAGTACAAGCACGTGTGATCTGGACGAGTTGCTTACTCTTCAATCTCGACAAAATTCATTTATCAGCACAACAAACCATAACTCTAACCATGGTGGTGTCATTGACAATTTAAGCAATCATTCTGACTTTGTAAATCATGGTAAGTTTAGGCTTCAATCTCGACACGTGATCTGGTGCTGATCTAGTCTGGTTTAAACTGAATCCAATTATGTCAATGAAAAATTAAAGTTGGTTACAAGTTTATATTTCAAATCGCAGGTTTTGTTCTTTGGACTCAGACCCGCCTTCGGTGGGTCGGAAATTGTGTGCCTGCTAAACGAACTAAAAAAATCACTTTACAGGATTAAGGTGAGTCTAATTTTGCTGCAGATACGTACTTGTTCATGCCATGAACCTTGTTGTTATTATGTCTACATGCTTATAATGCAAATGAAATCTCTCTCTGCCAATATTTCTAGTAATTCGGTCATCAAAAATCAGGCAGAAGGTTTTTTGAGTACAAGCACAAATGCATTTTGGGAAGTCAAATTTGCTGTGGATTTAGTTGTTTTCAGACTTTTTAACCCTACAATATTGCTTGGTTTTTGTTTACAGTTGGTATATGACTAAAGAACTATTGTTGGAAACCAGAAAGCCTTACCATCGACGCATACCTTTATCGGTAAGCCTGATTTTTCTCTGTTTTCTGGTGTTTTTCTTTAGTTGACTACACATTCAATTCCTCTGCTTTGAATATTAAACCATAATATAATTAACAGGAAATGGTAGACTTTTTGGTAGAAGAATGGGAAGAAGAAGGGCTATATTATTAAGCCGGTCAATTGAAAAAACAATCACCTTGTGCATACACTATCCTTGTGACTTTTTTCTTTCGTGTGTTGGAGTTTAATTCCGCGCCTACCACCTTAACTTGGGATCAATTCGATACAAGTTTAACATACAAAATGACACCATTGGTTTGCTAACCTTTTCGATATTGCTACATTGGAGATCTCTAAGGGGAGGGGCCAATTGTGAAGTAACCCAAAATCAAAGATCTTCCAATTGATCGGCGAGCTAAATGGTAAGCCCCCTCCGACCAATATACTTTATACATACATATCAAACTTTCTTCATCATTAGTTTAATATATGAAGAAGCATCAACTTTGCAGTGTGTTTGATGCAATGTTGTTGATGATTGACTTGTTGTAATTGATGTAAAAGAATAGATAATTAATCTCTCTAAAACAAACTCTTCTTTGTTTTGAATTCCTGATAAAATATTGAGATTGATTTTGTGGTGA GTTTCAATGCAAGTCACAATCACAATAATTTCATATCCAATCATGCCTTGTTTATCCGATTCTATCCGAAATTGGGGATTTTGATTCGATTCCCATTTTCCATTTTCCATTTTGATTTCGGCATGTTTCTGTGTTTTGATGTTTGTAATCTGATTTTTCGCCGAATATGGTGACCCGAGAGAGCTGGTTTTCTGTTTGGATCGATCGACTTCTCTCTTGTTTAGGGAGCATTAAACCTGCACCTGCCATCTCAGGGAATAACCTGAATTCTAGGATGCCAAGCATGTCAGAAGATTTTTGGAGTACAAGCACGTGTGATCTGGACGAGTTGCTTACTCTTCAATCTCGACAAAATTCATTTATCAGCACAACAAACCATAACTCTAACCATGGTGGTGTCATTGACAATTTAAGCAATCATTCTGACTTTGTAAATCATGGTTTTGTTCTTTGGACTCAGACCCGCCTTCGGTGGGTCGGAAATTGTGTGCCTGCTAAACGAACTAAAAAAATCACTTTACAGGATTAAGTTGGTATATGACTAAAGAACTATTGTTGGAAACCAGAAAGCCTTACCATCGACGCATACCTTTATCGGAAATGGTAGACTTTTTGGTAGAAGAATGGGAAGAAGAAGGGCTATATTATTAAGCCGGTCAATTGAAAAAACAATCACCTTGTGCATACACTATCCTTGTGACTTTTTTCTTTCGTGTGTTGGAGTTTAATTCCGCGCCTACCACCTTAACTTGGGATCAATTCGATACAAGTTTAACATACAAAATGACACCATTGGTTTGCTAACCTTTTCGATATTGCTACATTGGAGATCTCTAAGGGGAGGGGCCAATTGTGAAGTAACCCAAAATCAAAGATCTTCCAATTGATCGGCGAGCTAAATGGTAAGCCCCCTCCGACCAATATACTTTATACATACATATCAAACTTTCTTCATCATTAGTTTAATATATGAAGAAGCATCAACTTTGCAGTGTGTTTGATGCAATGTTGTTGATGATTGACTTGTTGTAATTGATGTAAAAGAATAGATAATTAATCTCTCTAAAACAAACTCTTCTTTGTTTTGAATTCCTGATAAAATATTGAGATTGATTTTGTGGTGA ATGGTGACCCGAGAGAGCTGGTTTTCTGTTTGGATCGATCGACTTCTCTCTTGTTTAGGGAGCATTAAACCTGCACCTGCCATCTCAGGGAATAACCTGAATTCTAGGATGCCAAGCATGTCAGAAGATTTTTGGAGTACAAGCACGTGTGATCTGGACGAGTTGCTTACTCTTCAATCTCGACAAAATTCATTTATCAGCACAACAAACCATAACTCTAACCATGGTGGTGTCATTGACAATTTAAGCAATCATTCTGACTTTGTAAATCATGGTTTTGTTCTTTGGACTCAGACCCGCCTTCGGTGGGTCGGAAATTGTGTGCCTGCTAAACGAACTAAAAAAATCACTTTACAGGATTAA MVTRESWFSVWIDRLLSCLGSIKPAPAISGNNLNSRMPSMSEDFWSTSTCDLDELLTLQSRQNSFISTTNHNSNHGGVIDNLSNHSDFVNHGFVLWTQTRLRWVGNCVPAKRTKKITLQD Homology
BLAST of PI0004107 vs. ExPASy TrEMBL
Match: A0A0A0LFZ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006290 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 8.1e-61 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0
BLAST of PI0004107 vs. ExPASy TrEMBL
Match: A0A1S3CQL1 (uncharacterized protein LOC103503177 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503177 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 8.1e-61 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0
BLAST of PI0004107 vs. ExPASy TrEMBL
Match: A0A1S4E5A2 (uncharacterized protein LOC103503177 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503177 PE=4 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 9.9e-59 Identity = 115/122 (94.26%), Postives = 115/122 (94.26%), Query Frame = 0
BLAST of PI0004107 vs. ExPASy TrEMBL
Match: A0A6J1KGB3 (uncharacterized protein LOC111493640 OS=Cucurbita maxima OX=3661 GN=LOC111493640 PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 2.1e-48 Identity = 95/115 (82.61%), Postives = 102/115 (88.70%), Query Frame = 0
BLAST of PI0004107 vs. ExPASy TrEMBL
Match: A0A6J1HSF5 (uncharacterized protein LOC111465709 OS=Cucurbita maxima OX=3661 GN=LOC111465709 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 1.7e-47 Identity = 93/115 (80.87%), Postives = 100/115 (86.96%), Query Frame = 0
BLAST of PI0004107 vs. NCBI nr
Match: XP_008465549.1 (PREDICTED: uncharacterized protein LOC103503177 isoform X2 [Cucumis melo]) HSP 1 Score: 242.7 bits (618), Expect = 1.7e-60 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0
BLAST of PI0004107 vs. NCBI nr
Match: XP_004139307.1 (uncharacterized protein LOC101220352 [Cucumis sativus] >KGN60683.1 hypothetical protein Csa_019419 [Cucumis sativus]) HSP 1 Score: 242.7 bits (618), Expect = 1.7e-60 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0
BLAST of PI0004107 vs. NCBI nr
Match: XP_016903413.1 (PREDICTED: uncharacterized protein LOC103503177 isoform X1 [Cucumis melo]) HSP 1 Score: 235.7 bits (600), Expect = 2.0e-58 Identity = 115/122 (94.26%), Postives = 115/122 (94.26%), Query Frame = 0
BLAST of PI0004107 vs. NCBI nr
Match: XP_038889429.1 (uncharacterized protein LOC120079339 isoform X1 [Benincasa hispida]) HSP 1 Score: 227.6 bits (579), Expect = 5.6e-56 Identity = 107/115 (93.04%), Postives = 109/115 (94.78%), Query Frame = 0
BLAST of PI0004107 vs. NCBI nr
Match: XP_038889430.1 (uncharacterized protein LOC120079339 isoform X2 [Benincasa hispida]) HSP 1 Score: 227.6 bits (579), Expect = 5.6e-56 Identity = 107/115 (93.04%), Postives = 109/115 (94.78%), Query Frame = 0
BLAST of PI0004107 vs. TAIR 10
Match: AT5G25360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 73.9 bits (180), Expect = 9.6e-14 Identity = 45/118 (38.14%), Postives = 61/118 (51.69%), Query Frame = 0
BLAST of PI0004107 vs. TAIR 10
Match: AT5G25360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1). ) HSP 1 Score: 73.9 bits (180), Expect = 9.6e-14 Identity = 45/118 (38.14%), Postives = 61/118 (51.69%), Query Frame = 0
BLAST of PI0004107 vs. TAIR 10
Match: AT1G15350.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15770.2); Has 148 Blast hits to 148 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). ) HSP 1 Score: 57.8 bits (138), Expect = 7.1e-09 Identity = 31/74 (41.89%), Postives = 45/74 (60.81%), Query Frame = 0
BLAST of PI0004107 vs. TAIR 10
Match: AT1G15350.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15770.2); Has 148 Blast hits to 148 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). ) HSP 1 Score: 57.8 bits (138), Expect = 7.1e-09 Identity = 31/74 (41.89%), Postives = 45/74 (60.81%), Query Frame = 0
BLAST of PI0004107 vs. TAIR 10
Match: AT4G32342.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25360.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 53.9 bits (128), Expect = 1.0e-07 Identity = 26/63 (41.27%), Postives = 39/63 (61.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|